View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18398_high_43 (Length: 269)
Name: NF18398_high_43
Description: NF18398
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18398_high_43 |
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Alignment Details
Target: chr4 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 28937854 - 28938100
Alignment:
| Q |
1 |
gaggggcaaggggcaagaggcaagggagcagagtgattcaatgacatacattttgactagtaatttacaatagtaccaccattattaactcgagtcctga |
100 |
Q |
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| T |
28937854 |
gaggggcaaggggcaagaggcaagggagcagagtgattcaatgacatacattttgactagtaatttacaatagtaccgccattattaactcgagtcctga |
28937953 |
T |
|
| Q |
101 |
cctcatgcacttcaactgacttgtagatatgtggacaagaacattcaacaaaaatacagattcaagcaagacaaacaacacatgtgttctacattattga |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
28937954 |
cctcatgcacttcaactgacttgtagatatgtggacaagaacattcaacaaaaatacagattcaaacaagacaaacaacacatgtgttctacattattga |
28938053 |
T |
|
| Q |
201 |
acaactcaatcaaacaataaaggaccacaaccttaaacacatgaaat |
247 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28938054 |
acaactcaatcaaacaataaaggaccacaaccttaaacacatgaaat |
28938100 |
T |
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