View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18398_low_32 (Length: 316)

Name: NF18398_low_32
Description: NF18398
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18398_low_32
NF18398_low_32
[»] chr1 (66 HSPs)
chr1 (1-296)||(16437402-16437716)
chr1 (1-178)||(6711003-6711180)
chr1 (1-180)||(844679-844858)
chr1 (1-179)||(1351391-1351569)
chr1 (2-183)||(51264536-51264717)
chr1 (1-179)||(35387267-35387445)
chr1 (1-178)||(16451167-16451344)
chr1 (32-180)||(41972982-41973130)
chr1 (1-180)||(45490830-45491009)
chr1 (1-182)||(16386894-16387074)
chr1 (1-174)||(32270393-32270566)
chr1 (27-179)||(32289300-32289452)
chr1 (1-180)||(30105634-30105814)
chr1 (1-180)||(17887988-17888167)
chr1 (1-180)||(26118170-26118349)
chr1 (1-180)||(31004172-31004351)
chr1 (1-180)||(42510565-42510744)
chr1 (1-182)||(24339591-24339773)
chr1 (1-178)||(41967805-41967983)
chr1 (27-178)||(17327606-17327757)
chr1 (1-177)||(28340262-28340437)
chr1 (1-178)||(50540384-50540561)
chr1 (27-182)||(42512723-42512878)
chr1 (1-180)||(16476110-16476289)
chr1 (1-177)||(7183958-7184134)
chr1 (1-180)||(44737997-44738176)
chr1 (27-180)||(50304717-50304870)
chr1 (27-178)||(5109794-5109945)
chr1 (1-180)||(26764750-26764929)
chr1 (32-178)||(39281965-39282111)
chr1 (1-143)||(12890278-12890420)
chr1 (31-179)||(46154977-46155125)
chr1 (1-180)||(6029251-6029435)
chr1 (1-178)||(1601213-1601387)
chr1 (27-180)||(11772587-11772740)
chr1 (27-181)||(51703117-51703271)
chr1 (27-180)||(45658887-45659040)
chr1 (27-180)||(49303309-49303462)
chr1 (1-180)||(42705192-42705372)
chr1 (27-174)||(6143947-6144094)
chr1 (47-178)||(8838983-8839114)
chr1 (27-180)||(15539845-15539998)
chr1 (27-160)||(16704792-16704925)
chr1 (36-174)||(3414814-3414952)
chr1 (27-180)||(10384433-10384581)
chr1 (27-178)||(7837199-7837351)
chr1 (27-143)||(13994067-13994183)
chr1 (38-116)||(20494927-20495005)
chr1 (99-183)||(38663245-38663329)
chr1 (74-180)||(21071727-21071833)
chr1 (101-180)||(40811326-40811405)
chr1 (1-172)||(50382363-50382537)
chr1 (61-178)||(7837474-7837592)
chr1 (1-141)||(38086990-38087130)
chr1 (27-81)||(25539921-25539975)
chr1 (27-180)||(26733621-26733774)
chr1 (31-121)||(570458-570549)
chr1 (135-180)||(16643187-16643232)
chr1 (123-183)||(25539980-25540040)
chr1 (27-122)||(6771434-6771529)
chr1 (27-121)||(504405-504499)
chr1 (27-68)||(23799604-23799645)
chr1 (34-121)||(25343222-25343310)
chr1 (27-122)||(2761569-2761664)
chr1 (61-177)||(33316499-33316615)
chr1 (148-180)||(46815685-46815717)
[»] chr7 (58 HSPs)
chr7 (1-180)||(36769450-36769629)
chr7 (1-180)||(43158567-43158746)
chr7 (1-180)||(10932438-10932617)
chr7 (1-177)||(11321769-11321945)
chr7 (1-181)||(26994105-26994285)
chr7 (1-180)||(40753190-40753369)
chr7 (27-181)||(47316578-47316732)
chr7 (1-180)||(47953225-47953404)
chr7 (27-180)||(11250678-11250831)
chr7 (1-177)||(21784906-21785082)
chr7 (1-180)||(41211081-41211260)
chr7 (4-178)||(3922586-3922760)
chr7 (1-180)||(1870170-1870349)
chr7 (1-180)||(26371690-26371869)
chr7 (27-181)||(30849126-30849280)
chr7 (1-177)||(44748730-44748906)
chr7 (1-180)||(18386560-18386738)
chr7 (2-180)||(16963174-16963352)
chr7 (27-180)||(29661384-29661536)
chr7 (1-179)||(43189124-43189302)
chr7 (27-180)||(38301403-38301557)
chr7 (1-180)||(46633732-46633906)
chr7 (1-172)||(18470719-18470888)
chr7 (27-179)||(48894778-48894930)
chr7 (1-180)||(43368236-43368415)
chr7 (27-180)||(17237137-17237290)
chr7 (1-179)||(32873654-32873829)
chr7 (27-180)||(9913586-9913738)
chr7 (27-180)||(9927274-9927426)
chr7 (27-180)||(11822284-11822437)
chr7 (27-177)||(20127350-20127500)
chr7 (27-130)||(30598939-30599042)
chr7 (27-181)||(1363697-1363851)
chr7 (1-179)||(26910293-26910470)
chr7 (1-181)||(43213805-43213985)
chr7 (1-145)||(23349207-23349351)
chr7 (30-180)||(22723913-22724063)
chr7 (32-180)||(48445587-48445735)
chr7 (47-174)||(37967055-37967182)
chr7 (1-182)||(34295290-34295464)
chr7 (1-180)||(34519543-34519722)
chr7 (27-180)||(46448525-46448678)
chr7 (3-177)||(329507-329687)
chr7 (1-173)||(3891930-3892086)
chr7 (27-161)||(21133433-21133567)
chr7 (61-178)||(26700572-26700689)
chr7 (1-143)||(22724449-22724591)
chr7 (27-179)||(15035133-15035287)
chr7 (27-77)||(46408950-46408999)
chr7 (27-96)||(34117513-34117581)
chr7 (99-179)||(41223320-41223400)
chr7 (63-162)||(21408526-21408625)
chr7 (29-81)||(22631801-22631853)
chr7 (29-124)||(2049014-2049109)
chr7 (61-120)||(3359778-3359837)
chr7 (1-65)||(26652901-26652965)
chr7 (86-180)||(41665479-41665573)
chr7 (27-76)||(29372764-29372813)
[»] chr5 (45 HSPs)
chr5 (1-180)||(34794918-34795097)
chr5 (29-180)||(35701336-35701487)
chr5 (3-180)||(7770165-7770342)
chr5 (1-178)||(32528746-32528923)
chr5 (1-180)||(11963372-11963551)
chr5 (1-180)||(8136868-8137047)
chr5 (32-178)||(24181512-24181658)
chr5 (3-180)||(4689584-4689761)
chr5 (1-174)||(7523203-7523376)
chr5 (1-180)||(31879962-31880141)
chr5 (1-180)||(39918538-39918717)
chr5 (1-177)||(31770480-31770656)
chr5 (1-180)||(2351711-2351890)
chr5 (1-178)||(39788224-39788401)
chr5 (1-180)||(7208116-7208295)
chr5 (34-180)||(41459653-41459798)
chr5 (1-178)||(3735388-3735565)
chr5 (27-178)||(23091192-23091343)
chr5 (3-179)||(29241411-29241587)
chr5 (1-180)||(31644477-31644656)
chr5 (1-134)||(21739093-21739226)
chr5 (1-178)||(6284188-6284363)
chr5 (1-174)||(553428-553601)
chr5 (27-178)||(5598537-5598688)
chr5 (1-181)||(40489368-40489547)
chr5 (27-173)||(41790356-41790501)
chr5 (1-163)||(22493322-22493484)
chr5 (33-182)||(37148473-37148622)
chr5 (1-177)||(24036261-24036436)
chr5 (1-180)||(5571543-5571709)
chr5 (1-180)||(18470314-18470493)
chr5 (34-180)||(27838960-27839105)
chr5 (27-182)||(8560866-8561021)
chr5 (1-122)||(28090464-28090585)
chr5 (27-154)||(700513-700640)
chr5 (1-121)||(4818085-4818205)
chr5 (27-132)||(22432243-22432348)
chr5 (1-173)||(7725702-7725874)
chr5 (27-174)||(32092874-32093020)
chr5 (62-180)||(4664923-4665041)
chr5 (27-169)||(5673196-5673329)
chr5 (4-180)||(17031191-17031367)
chr5 (148-181)||(21739015-21739048)
chr5 (135-178)||(40182553-40182596)
chr5 (1-62)||(40182495-40182556)
[»] chr3 (57 HSPs)
chr3 (1-179)||(51259655-51259833)
chr3 (27-183)||(20255102-20255258)
chr3 (27-180)||(2135128-2135281)
chr3 (1-178)||(29584907-29585084)
chr3 (27-180)||(40094561-40094714)
chr3 (1-180)||(12349045-12349224)
chr3 (1-180)||(21221235-21221413)
chr3 (1-180)||(25927201-25927380)
chr3 (1-180)||(28675822-28676001)
chr3 (1-174)||(1344587-1344760)
chr3 (1-174)||(24571313-24571486)
chr3 (1-178)||(44116971-44117148)
chr3 (1-178)||(47958308-47958485)
chr3 (1-180)||(31882896-31883075)
chr3 (1-180)||(42636277-42636456)
chr3 (1-158)||(20609544-20609701)
chr3 (1-169)||(34026699-34026867)
chr3 (1-177)||(39052715-39052891)
chr3 (2-186)||(49748779-49748963)
chr3 (1-180)||(38213386-38213565)
chr3 (1-163)||(25860312-25860474)
chr3 (2-180)||(51925082-51925260)
chr3 (1-180)||(21373962-21374141)
chr3 (1-186)||(3864545-3864728)
chr3 (27-179)||(51296639-51296789)
chr3 (33-180)||(53557669-53557816)
chr3 (1-180)||(33364652-33364831)
chr3 (28-181)||(41682926-41683079)
chr3 (1-181)||(50386329-50386509)
chr3 (1-180)||(50678830-50679009)
chr3 (1-179)||(4851338-4851509)
chr3 (57-181)||(3695180-3695304)
chr3 (1-177)||(19906794-19906970)
chr3 (27-179)||(24721543-24721695)
chr3 (69-180)||(5442379-5442490)
chr3 (1-173)||(54622678-54622849)
chr3 (2-181)||(29646099-29646278)
chr3 (30-180)||(45690780-45690930)
chr3 (27-180)||(3867523-3867676)
chr3 (1-177)||(3964320-3964496)
chr3 (27-180)||(6179483-6179637)
chr3 (84-180)||(43175590-43175686)
chr3 (1-180)||(22484617-22484796)
chr3 (30-163)||(52300497-52300633)
chr3 (32-175)||(10747263-10747406)
chr3 (57-120)||(53046605-53046668)
chr3 (27-124)||(34351298-34351395)
chr3 (1-122)||(26282316-26282440)
chr3 (31-140)||(30258934-30259043)
chr3 (101-174)||(44267868-44267941)
chr3 (239-296)||(49928938-49928995)
chr3 (50-132)||(39215391-39215473)
chr3 (59-180)||(8253763-8253884)
chr3 (59-174)||(26847417-26847532)
chr3 (102-163)||(17264563-17264624)
chr3 (37-73)||(25954518-25954554)
chr3 (57-93)||(53046524-53046560)
[»] chr2 (60 HSPs)
chr2 (1-181)||(9732809-9732989)
chr2 (1-180)||(7761453-7761632)
chr2 (1-173)||(35114816-35114988)
chr2 (1-180)||(34338841-34339020)
chr2 (1-178)||(37308686-37308864)
chr2 (1-179)||(2644968-2645145)
chr2 (1-179)||(18685867-18686045)
chr2 (1-177)||(7258928-7259104)
chr2 (1-180)||(33889274-33889453)
chr2 (27-180)||(32766384-32766537)
chr2 (27-180)||(33366667-33366820)
chr2 (1-178)||(32497946-32498123)
chr2 (1-179)||(17540746-17540924)
chr2 (1-177)||(19513571-19513748)
chr2 (27-182)||(28824435-28824590)
chr2 (27-183)||(10399747-10399903)
chr2 (1-182)||(40692328-40692509)
chr2 (1-177)||(44284660-44284836)
chr2 (27-179)||(30798370-30798522)
chr2 (27-180)||(42365634-42365787)
chr2 (1-178)||(30326214-30326390)
chr2 (1-175)||(5278720-5278893)
chr2 (1-177)||(3913343-3913519)
chr2 (1-160)||(42706390-42706549)
chr2 (1-180)||(11114903-11115080)
chr2 (27-165)||(12672373-12672507)
chr2 (27-143)||(16104331-16104447)
chr2 (1-178)||(38992953-38993130)
chr2 (1-181)||(6896199-6896379)
chr2 (29-174)||(39461376-39461518)
chr2 (1-180)||(16177763-16177942)
chr2 (29-163)||(26981606-26981740)
chr2 (27-181)||(40832348-40832502)
chr2 (1-180)||(38623184-38623363)
chr2 (77-180)||(37863246-37863349)
chr2 (27-178)||(41365992-41366143)
chr2 (51-183)||(18793170-18793300)
chr2 (37-177)||(30712927-30713067)
chr2 (32-178)||(2086134-2086270)
chr2 (86-180)||(9717317-9717411)
chr2 (27-180)||(8112357-8112511)
chr2 (27-177)||(27462685-27462835)
chr2 (27-162)||(4641573-4641706)
chr2 (27-181)||(13829495-13829637)
chr2 (93-180)||(37003771-37003858)
chr2 (1-82)||(26418954-26419035)
chr2 (1-72)||(9717255-9717326)
chr2 (1-67)||(37003861-37003927)
chr2 (1-73)||(1247178-1247250)
chr2 (27-82)||(12939278-12939333)
chr2 (46-120)||(15303180-15303254)
chr2 (76-180)||(45463002-45463107)
chr2 (104-176)||(12939202-12939274)
chr2 (27-90)||(130356-130418)
chr2 (27-170)||(40876514-40876657)
chr2 (105-179)||(31193949-31194023)
chr2 (31-125)||(36843523-36843617)
chr2 (99-140)||(6437408-6437448)
chr2 (41-174)||(18278973-18279104)
chr2 (74-174)||(83374-83474)
[»] chr8 (50 HSPs)
chr8 (1-180)||(27103990-27104169)
chr8 (1-178)||(34063159-34063336)
chr8 (1-180)||(37664177-37664357)
chr8 (1-180)||(4052511-4052690)
chr8 (1-180)||(30542917-30543096)
chr8 (4-180)||(29672217-29672394)
chr8 (1-177)||(8672953-8673129)
chr8 (29-180)||(34101567-34101718)
chr8 (1-180)||(7394709-7394888)
chr8 (27-180)||(41709834-41709987)
chr8 (27-180)||(31513478-31513631)
chr8 (1-180)||(39642914-39643093)
chr8 (3-181)||(30501178-30501356)
chr8 (27-180)||(37618287-37618440)
chr8 (1-178)||(10467095-10467272)
chr8 (32-180)||(37474762-37474910)
chr8 (1-181)||(45446486-45446666)
chr8 (27-181)||(5968758-5968912)
chr8 (1-143)||(29563158-29563300)
chr8 (32-181)||(37861921-37862069)
chr8 (1-178)||(29610952-29611129)
chr8 (1-180)||(6386607-6386786)
chr8 (1-180)||(25478274-25478453)
chr8 (1-180)||(32019896-32020075)
chr8 (27-180)||(3251551-3251704)
chr8 (27-180)||(7591342-7591495)
chr8 (34-175)||(22999322-22999463)
chr8 (27-174)||(40389097-40389244)
chr8 (1-176)||(14004943-14005118)
chr8 (1-180)||(41548649-41548828)
chr8 (1-174)||(12753226-12753399)
chr8 (34-178)||(17805755-17805899)
chr8 (4-175)||(15001500-15001671)
chr8 (32-176)||(13406834-13406978)
chr8 (27-180)||(35225719-35225872)
chr8 (32-178)||(45114117-45114263)
chr8 (1-180)||(17520626-17520804)
chr8 (32-177)||(31732126-31732257)
chr8 (86-180)||(32303503-32303597)
chr8 (27-180)||(16485704-16485857)
chr8 (1-183)||(21272715-21272880)
chr8 (27-174)||(10656587-10656734)
chr8 (105-180)||(38047481-38047556)
chr8 (1-72)||(32303588-32303659)
chr8 (27-180)||(22756311-22756459)
chr8 (98-184)||(15351821-15351907)
chr8 (4-162)||(16595063-16595220)
chr8 (27-141)||(10320213-10320325)
chr8 (105-141)||(10531415-10531451)
chr8 (27-122)||(36426202-36426295)
[»] chr6 (43 HSPs)
chr6 (1-180)||(15276856-15277035)
chr6 (1-175)||(10324035-10324209)
chr6 (1-177)||(166845-167021)
chr6 (1-177)||(3259714-3259890)
chr6 (1-180)||(24203393-24203572)
chr6 (1-181)||(11382095-11382273)
chr6 (27-180)||(32409771-32409924)
chr6 (1-174)||(2614927-2615100)
chr6 (1-180)||(10960031-10960210)
chr6 (2-180)||(11613710-11613888)
chr6 (1-177)||(3932729-3932905)
chr6 (1-180)||(17867866-17868045)
chr6 (1-180)||(17877649-17877828)
chr6 (1-180)||(15277199-15277378)
chr6 (29-178)||(11212316-11212465)
chr6 (1-175)||(11279159-11279333)
chr6 (1-182)||(10485188-10485369)
chr6 (34-181)||(3379774-3379921)
chr6 (1-180)||(18057550-18057729)
chr6 (5-180)||(34176865-34177040)
chr6 (1-179)||(17443293-17443466)
chr6 (1-143)||(24242695-24242837)
chr6 (32-180)||(14925375-14925523)
chr6 (1-137)||(32132342-32132478)
chr6 (27-180)||(31870016-31870172)
chr6 (1-177)||(9902580-9902756)
chr6 (27-180)||(11675293-11675446)
chr6 (27-179)||(3290727-3290868)
chr6 (1-180)||(29054387-29054566)
chr6 (1-134)||(4494079-4494213)
chr6 (27-180)||(32860108-32860261)
chr6 (1-178)||(18597079-18597256)
chr6 (1-178)||(8177803-8177979)
chr6 (27-180)||(23636280-23636433)
chr6 (27-178)||(14807939-14808073)
chr6 (62-173)||(9614066-9614177)
chr6 (1-139)||(34683953-34684081)
chr6 (34-170)||(9200316-9200453)
chr6 (101-180)||(14925136-14925215)
chr6 (107-174)||(13415861-13415928)
chr6 (107-176)||(33041403-33041472)
chr6 (72-132)||(27824620-27824680)
chr6 (27-82)||(24785112-24785167)
[»] chr4 (84 HSPs)
chr4 (1-180)||(24002373-24002552)
chr4 (1-183)||(23521914-23522096)
chr4 (1-180)||(29785409-29785589)
chr4 (27-181)||(38486129-38486283)
chr4 (1-180)||(50727786-50727965)
chr4 (1-180)||(50735800-50735979)
chr4 (1-178)||(38812554-38812731)
chr4 (1-181)||(12600920-12601100)
chr4 (30-180)||(29616228-29616379)
chr4 (1-181)||(33176904-33177084)
chr4 (27-182)||(46680381-46680536)
chr4 (1-180)||(52319357-52319541)
chr4 (27-180)||(36885992-36886145)
chr4 (27-175)||(2725011-2725159)
chr4 (1-181)||(1231345-1231525)
chr4 (1-185)||(56154655-56154839)
chr4 (34-180)||(2629824-2629970)
chr4 (1-180)||(52949754-52949933)
chr4 (27-180)||(36497277-36497430)
chr4 (2-180)||(44324215-44324393)
chr4 (27-180)||(50186588-50186741)
chr4 (1-178)||(20802406-20802583)
chr4 (1-177)||(9512216-9512392)
chr4 (1-181)||(44649036-44649216)
chr4 (1-177)||(49151976-49152152)
chr4 (1-180)||(33552715-33552894)
chr4 (1-179)||(55065207-55065385)
chr4 (27-180)||(11056102-11056255)
chr4 (1-178)||(6776612-6776789)
chr4 (1-177)||(32181297-32181473)
chr4 (27-178)||(42870031-42870182)
chr4 (1-180)||(36743562-36743740)
chr4 (27-181)||(50178364-50178518)
chr4 (27-180)||(21580086-21580238)
chr4 (32-177)||(41711912-41712057)
chr4 (30-174)||(20694434-20694578)
chr4 (27-178)||(2787024-2787175)
chr4 (27-178)||(6973788-6973939)
chr4 (1-180)||(20517894-20518074)
chr4 (34-177)||(54543056-54543198)
chr4 (1-180)||(3649670-3649849)
chr4 (1-143)||(21202773-21202915)
chr4 (27-179)||(47361287-47361439)
chr4 (1-178)||(4325825-4326002)
chr4 (1-177)||(55593919-55594096)
chr4 (1-173)||(24210353-24210525)
chr4 (27-178)||(29592955-29593106)
chr4 (27-174)||(39078721-39078868)
chr4 (45-177)||(14296645-14296777)
chr4 (45-177)||(14314893-14315025)
chr4 (1-161)||(37865787-37865947)
chr4 (1-180)||(50729415-50729594)
chr4 (27-180)||(16320579-16320731)
chr4 (32-180)||(9807221-9807368)
chr4 (27-143)||(34929975-34930091)
chr4 (27-179)||(42772848-42773000)
chr4 (47-178)||(56487162-56487288)
chr4 (27-180)||(22318257-22318410)
chr4 (1-178)||(28115286-28115462)
chr4 (1-156)||(47642388-47642543)
chr4 (32-180)||(26083404-26083550)
chr4 (34-178)||(25978487-25978630)
chr4 (27-178)||(53200518-53200669)
chr4 (86-178)||(23328015-23328107)
chr4 (1-180)||(7554830-7555009)
chr4 (27-179)||(30942848-30943000)
chr4 (1-122)||(37695472-37695593)
chr4 (1-73)||(43641133-43641205)
chr4 (27-181)||(44355727-44355880)
chr4 (32-124)||(9947994-9948086)
chr4 (124-183)||(2114193-2114252)
chr4 (27-72)||(23327979-23328024)
chr4 (61-178)||(44640417-44640533)
chr4 (27-91)||(7001912-7001976)
chr4 (104-180)||(13110443-13110519)
chr4 (27-67)||(37931980-37932020)
chr4 (101-173)||(43739572-43739644)
chr4 (1-76)||(43739495-43739570)
chr4 (61-180)||(3579219-3579338)
chr4 (101-161)||(31445768-31445830)
chr4 (27-90)||(52673871-52673934)
chr4 (138-181)||(38520597-38520641)
chr4 (111-163)||(44365940-44365992)
chr4 (87-123)||(51518493-51518529)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-180)||(23606-23785)
[»] scaffold0208 (1 HSPs)
scaffold0208 (1-180)||(2225-2403)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-180)||(15203-15382)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-179)||(101980-102158)
[»] scaffold0729 (1 HSPs)
scaffold0729 (1-178)||(4467-4644)
[»] scaffold0360 (1 HSPs)
scaffold0360 (1-179)||(15260-15446)
[»] scaffold0098 (1 HSPs)
scaffold0098 (1-182)||(51470-51650)
[»] scaffold0025 (1 HSPs)
scaffold0025 (27-173)||(5332-5479)
[»] scaffold0957 (1 HSPs)
scaffold0957 (27-179)||(2383-2535)
[»] scaffold0169 (2 HSPs)
scaffold0169 (1-138)||(17982-18119)
scaffold0169 (1-75)||(12527-12601)
[»] scaffold0650 (1 HSPs)
scaffold0650 (1-177)||(1532-1708)
[»] scaffold0280 (1 HSPs)
scaffold0280 (32-183)||(13570-13721)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-174)||(372856-373029)
[»] scaffold0181 (1 HSPs)
scaffold0181 (1-180)||(18978-19155)
[»] scaffold0050 (1 HSPs)
scaffold0050 (27-174)||(42843-42989)
[»] scaffold0047 (1 HSPs)
scaffold0047 (27-183)||(19038-19195)


Alignment Details
Target: chr1 (Bit Score: 203; Significance: 1e-111; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 16437402 - 16437716
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16437402 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcctttgcctctagtttgtcctgtagctg 16437501  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc--aaatttgttgatgcttgt 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||  ||| ||||||||||||||    
T  16437502 aaacagttttacaaatcaaacattggacaactagagttgttctattctgtccttcattttttagcaaatcaaatgcatccataaacttgttgatgcttgt 16437601  T
Q  199 agttttcttgttgagttggtcgatgtaggccatgtg-----------------taaattggtttgtgatggacttcgtttgaaagaagagcatgggttga 281  Q
    ||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||||||| |||||||||    
T  16437602 agttttcttgttgagttggtcgatgtaggccatgtgcctcaagagtatacttataaattggtttgtgatggacttcgtttgaaagaagaggatgggttga 16437701  T
Q  282 tgagtggtgaagtgc 296  Q
    |||||||||||||||    
T  16437702 tgagtggtgaagtgc 16437716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 6711180 - 6711003
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  6711180 gacaacttgtacgtgggacaaaaaattgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctg 6711081  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    |||||||||||||||||||||| |||||||||||||||||||| |  |||||||||||||||||||||||||||||||    
T  6711080 aaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaacgcac 6711003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 844858 - 844679
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  844858 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctg 844759  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| |||||||||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  844758 aaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaacgcaccc 844679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 1351569 - 1351391
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||    
T  1351569 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagtttgtcctgtacctg 1351470  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacc 179  Q
    |||||||||||||||||||||| |||||||||||||||||||| |  ||||||||||||||||||||||||||||||||    
T  1351469 aaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaacgcacc 1351391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 2 - 183
Target Start/End: Original strand, 51264536 - 51264717
Alignment:
Q  2 acaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctga 101  Q
    ||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||    
T  51264536 acaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcctgtacctga 51264635  T
Q  102 aacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacccaaa 183  Q
    ||||||||||||||||||||| ||||||||||||||| |||| |  ||||||||||||||||||||||||||||||||||||    
T  51264636 aacagttttacaaatcaaacactggacaactagagttattctgtcttgtccttcattttttagcaaatcaaacgcacccaaa 51264717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 35387445 - 35387267
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||    
T  35387445 gacaacttgtacgtggaacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttacctccagtttgtcctgtacctg 35387346  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacc 179  Q
    |||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  35387345 aaacagttttacaaatcaaacactggacaactagagttgttctgtcatgtccttcattttttagcaaatcaaacgcacc 35387267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 16451167 - 16451344
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||| |||||||       ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  16451167 gacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagagacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctg 16451266  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    ||||||||||||||||||||||||||||||||||||||||| | |  |||||||||||||||| ||||||||||||||    
T  16451267 aaacagttttacaaatcaaacattggacaactagagttgttatgtcctgtccttcattttttaacaaatcaaacgcac 16451344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 32 - 180
Target Start/End: Original strand, 41972982 - 41973130
Alignment:
Q  32 tgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaac 131  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  41972982 tgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtatctgaaacagttttacaaatcaaacactggacaac 41973081  T
Q  132 tagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||||||  ||||||||||||||||||||||||||| |||||    
T  41973082 tagagttgttctatcctgtccttcattttttagcaaatcaaactcaccc 41973130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 45491009 - 45490830
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||  ||    
T  45491009 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtacttg 45490910  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| |||||||||||| ||||||| |  |||| ||||||||||||||||||||||||||||    
T  45490909 aaacagttttacaaatcaaacactggacaactagaattgttctgtcctgtctttcattttttagcaaatcaaacgcaccc 45490830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 16386894 - 16387074
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16386894 gacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctg 16386993  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacccaa 182  Q
    |||||||||||||||||||||| || |||||||||  |||||| | |||||||||||||||||| |||||||||||| ||||    
T  16386994 aaacagttttacaaatcaaacactgaacaactagaactgttctgtcatgtccttcattttttag-aaatcaaacgcagccaa 16387074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 32270393 - 32270566
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||| ||||||       |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||    
T  32270393 gacaacttgtacatgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctctacctg 32270492  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaac 174  Q
    |||||||||||||||||||||| |||||||||||||||||||| |  |||||||||||||||||||||||||||    
T  32270493 aaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaac 32270566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 27 - 179
Target Start/End: Complemental strand, 32289452 - 32289300
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||| ||||||||||||||||||||||||| |||    
T  32289452 tgtgctgtggtttggtgagggacaaaaatatgagtttttgtcttgtcccttgcctccaatttgtcctgtacctgaaacagttttacaaatcaaacactgg 32289353  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacc 179  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||||||||    
T  32289352 acaactagagttgttctgtcttgtccttcattttttagcaaatcaaacgcacc 32289300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 30105814 - 30105634
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       | || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||    
T  30105814 gacaacttgtacgtgggacaaaaagttatgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctttacctg 30105715  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcatt-ttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||| ||||||||||||||| ||||||    
T  30105714 aaacagttttacaaatcaaacactggacaactagagttgttctatcctgtccttcatttttttagcaaatcaaaagcaccc 30105634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 17887988 - 17888167
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||    
T  17887988 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggcgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcttgtacctg 17888087  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||||||||||||||  ||||||||||||||||| | | ||||| ||||||||||||||||||||| ||||||    
T  17888088 aaacagttttacaaatcaaacaccggacaactagagttgttttgtcatgtcattcattttttagcaaatcaaatgcaccc 17888167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 26118349 - 26118170
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||| ||||||||||       |||| |||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||    
T  26118349 gacaacttttacgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaatatgagtttttgtcctgtcctttgcctccagtttgtcctgtacctg 26118250  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| |||||||||||||||||| | | ||||||||||||||||||||||||| ||||||||    
T  26118249 aaacagttttacaaatcaaacactggacaactagagttgttatgtcatgtccttcattttttagcaaatcatacgcaccc 26118170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 31004172 - 31004351
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||| || ||||||||||||||||| |||||| ||||||||||||| |||    
T  31004172 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaacatcagtttttgtcctgtcccgtgcctccagtttgtcctgtacctg 31004271  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| |||||||||  ||||||||| |  |||||||||||||||||||||||||||||||||    
T  31004272 aaacagttttacaaatcaaacactggacaactgaagttgttctgtcctgtccttcattttttagcaaatcaaacgcaccc 31004351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 42510565 - 42510744
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| |||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||    
T  42510565 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagagacaaaaatatgagtttttgtcctgtcccttgtctccagtttgtcctgtacctg 42510664  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||| ||||||||| ||||||||||||||||| || |  |||||||||||||||||||||||||||||||||    
T  42510665 aaacagttttacgaatcaaacactggacaactagagttgtcctgtcctgtccttcattttttagcaaatcaaacgcaccc 42510744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 24339773 - 24339591
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggttt-ggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagct 99  Q
    ||||||||||||||||||        ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||    
T  24339773 gacaacttgtacgtgggaaaaaaagttgtgttgtggttttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcatgtacct 24339674  T
Q  100 gaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacccaa 182  Q
    ||||||||| ||||||||||||| || ||||||||||||||||| |  ||||||| |||||||||||||||||||||||||||    
T  24339673 gaaacagttatacaaatcaaacactgaacaactagagttgttctgtcctgtcctttattttttagcaaatcaaacgcacccaa 24339591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 41967983 - 41967805
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||| |||       |||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||    
T  41967983 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtaagggacaaaaatatgagtttttgtcttgtctcttgcctctagtttgtcctgtacctg 41967884  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttag-caaatcaaacgcac 178  Q
    |||||||||||||||||||| | |||||||||||||||||||| |  ||||||||||||||||| ||||||||||||||    
T  41967883 aaacagttttacaaatcaaatactggacaactagagttgttctgtcctgtccttcattttttagtcaaatcaaacgcac 41967805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 27 - 178
Target Start/End: Complemental strand, 17327757 - 17327606
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||| ||||| |||    
T  17327757 tgtgctgtgatttggtgagggacaaaaatatgagtttttgtcctgtcccttgactccagtttgtcctgtacctgaaacagttttacaaattaaacactgg 17327658  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    ||||||||||||||| | |  |||||||||||||||||||||||||||||||    
T  17327657 acaactagagttgttttgtcttgtccttcattttttagcaaatcaaacgcac 17327606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 28340437 - 28340262
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||| |||       |||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||| |||| |||    
T  28340437 gacaacttgtacgtgagacaaaaagttgtgctgtggtttgatgagggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcttgtacctg 28340338  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgca 177  Q
    |||||||||||||||||||||| ||||||||||||||||||||||  ||||||| ||||||||||||||||||||||    
T  28340337 aaacagttttacaaatcaaacactggacaactagagttgttctatcctgtcctt-attttttagcaaatcaaacgca 28340262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 50540384 - 50540561
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||| ||| |||||||||||||||||| |||||||||||||||||| ||||||||||||| ||     
T  50540384 gacaacttgtacgtgggacaaaaagttgtgttgtggtttgatgaaggacaaaaatatgagtttatgtcctgtcccttgcctccagtttgtcctgtaccta 50540483  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    |||||||||||||||||||||| ||||||||||||| |||| | || |||||||  ||||||||||||||||||||||    
T  50540484 aaacagttttacaaatcaaacactggacaactagagctgttttgttctgtcctttcttttttagcaaatcaaacgcac 50540561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 27 - 182
Target Start/End: Complemental strand, 42512878 - 42512723
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||||||||||||| ||||| |||||||||| ||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||| |||    
T  42512878 tgtgttgtggtttgctgaggcacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactgg 42512779  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacccaa 182  Q
    ||||||  ||||||||| |  ||||||| |||||||||||||||||||||||||||    
T  42512778 acaactgaagttgttctgtcctgtcctttattttttagcaaatcaaacgcacccaa 42512723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 16476289 - 16476110
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       ||||  ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||    
T  16476289 gacaacttgtacgtgggacaaaaagttgtgccgtggtttggtgagggacaaaaatatgagtttttatcctgtcccttgcatctagtttgtcctgtacctg 16476190  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| |||||||||| | |||| || |  | ||||||||||||||||||||||||| |||||    
T  16476189 aaacagttttacaaatcaaacactggacaactaaaattgtcctctcctctccttcattttttagcaaatcaaacacaccc 16476110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 7183958 - 7184134
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||| ||||       |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  7183958 gacaacttgtacgtaggacaaaaagttgtgttgtggtttggtaagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctg 7184057  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgca 177  Q
    ||||||||||||| |||||||| |||||||||| |||| |||| |  |||| ||||  |||||||||||||||||||    
T  7184058 aaacagttttacatatcaaacactggacaactaaagttattctgtcctgtctttcaaattttagcaaatcaaacgca 7184134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 44738176 - 44737997
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |  ||||| |||| |||    
T  44738176 gacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttggtcctgtcccttgcctccaagttgtcatgtacctg 44738077  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||| ||||| ||||||| |||||||||||| |  |||| |||||||||||||||| |||||||||||    
T  44738076 aaacagttttacaaattaaacactggacaattagagttgttctgtcttgtctttcattttttagcaaaacaaacgcaccc 44737997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 50304717 - 50304870
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| |||||||||  ||||||||||||||| |||||||||| |||  |||||||| ||||||||||||| ||||||||||||||||||||||||| |||    
T  50304717 tgtgctgtggtttgcagagggacaaaaatatcagtttttgtcttgtttcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactgg 50304816  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||| |||||||||| |  |||||||||||||||||||||||||||||||||    
T  50304817 acaactggagttgttctgtcctgtccttcattttttagcaaatcaaacgcaccc 50304870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 27 - 178
Target Start/End: Original strand, 5109794 - 5109945
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||| |||| ||||||||||||||||||||||||| ||     
T  5109794 tgtgatgtggtttggtgagggacaaaaacatgagtttttgtcctgtcccttgcctccaatttgtcttgtacctgaaacagttttacaaatcaaacactga 5109893  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    |||||| |||||||||| |  ||  |||||||||||||||||||||||||||    
T  5109894 acaactggagttgttctgtcctgcacttcattttttagcaaatcaaacgcac 5109945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 26764929 - 26764750
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||| |||||||||||||||||| |||||||||||||||| ||||||| ||||| || |||| ||     
T  26764929 gacaacttgtacgtgggacaaaaagttgtgttgtggttcggtgagggacaaaaatataagtttttgtcctgtcctttgcctccagtttatcttgtaccta 26764830  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||| || ||||||||||||| ||||||||| |||||||||| | ||||| || |||||||||||||||||||||||||    
T  26764829 aaacaattgtacaaatcaaacactggacaactggagttgttctgtcatgtcttttattttttagcaaatcaaacgcaccc 26764750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 32 - 178
Target Start/End: Original strand, 39281965 - 39282111
Alignment:
Q  32 tgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaac 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||| || |||||    
T  39281965 tgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcatctagtttgtcctgtaccttaaacagttttacaaatcaaacactgaacaac 39282064  T
Q  132 tagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    |  |||| |  | | ||||||||||| ||||||||||||||||||||    
T  39282065 tgaagttatcttgtcatgtccttcatgttttagcaaatcaaacgcac 39282111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 12890278 - 12890420
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| | |    
T  12890278 gacaacttgtacgtgggacaaaaagttgtgctgtggtttgatgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttatcctgtaccag 12890377  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttct 143  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  12890378 aaacagttttacaaatcaaacactggacaactagagttgttct 12890420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 31 - 179
Target Start/End: Original strand, 46154977 - 46155125
Alignment:
Q  31 ttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaa 130  Q
    |||| |||||||||||||||||||||||||||||||||||||||||  |||| ||||||||| ||| |||||| | |||||||||||||||| || ||||    
T  46154977 ttgtagtttggtgagggacaaaaatatgagtttttgtcctgtccctcacctccagtttgtccagtacctgaaataattttacaaatcaaacactgaacaa 46155076  T
Q  131 ctagagttgttctattatgtccttcattttttagcaaatcaaacgcacc 179  Q
     |||||||||||| | |||||||||||||||||||||||||||| ||||    
T  46155077 ttagagttgttctgtcatgtccttcattttttagcaaatcaaacacacc 46155125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 6029435 - 6029251
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||| | |||||||||||||||||||||||  ||||||| ||||  |||    
T  6029435 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagtttttgtcctgtcccttgccttcagtttgttctgtccctg 6029336  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgtt-----ctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| ||||||||| ||||||||     || |  |||||||||||||||| ||||||||||||||||    
T  6029335 aaacagttttacaaatcaaacactggacaactggagttgttctgtcctgtcctgtccttcattttttaacaaatcaaacgcaccc 6029251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 1601213 - 1601387
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||| |||||||       |||||||||||||||||||||||||||||  |||||||||| || ||||||||||| ||||||||||||| |||    
T  1601213 gacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat--gagtttttgttctatcccttgcctccagtttgtcctgtacctg 1601310  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    |||| ||||||||||||||||| || ||||||| ||||||||| | |||| ||||| |||||||||||||||||||||    
T  1601311 aaaccgttttacaaatcaaacactgaacaactaaagttgttctgtcatgttcttca-tttttagcaaatcaaacgcac 1601387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 11772740 - 11772587
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| |||||||||||||||||||||||||| |||||||||| ||||| ||||||| || ||| | |||| ||||||||||||||||||||||||| |||    
T  11772740 tgtgctgtggtttggtgagggacaaaaatatcagtttttgtcttgtcctttgcctccagattgccttgtacctgaaacagttttacaaatcaaacactgg 11772641  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||| |||||||| | |  ||||||||||||| |||||||||||||||||||    
T  11772640 acaactggagttgttatgtcctgtccttcattttctagcaaatcaaacgcaccc 11772587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 27 - 181
Target Start/End: Complemental strand, 51703271 - 51703117
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||||||||||| ||||||| |||||||||||||||||||| |||||||||||||  ||||| |||||||  ||||||| |||||||||||||||| |||    
T  51703271 tgtgttgtggtt-ggtgaggaacaaaaatatgagtttttgttctgtcccttgccttcagtttatcctgtacttgaaacaattttacaaatcaaacactgg 51703173  T
Q  127 acaactagagttgttctattatgtccttcattttttag-caaatcaaacgcaccca 181  Q
    |||| |||||||||||| |  ||||||||||||||||| |||||||||||||||||    
T  51703172 acaattagagttgttctgtcttgtccttcattttttagtcaaatcaaacgcaccca 51703117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 45658887 - 45659040
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    ||||||||||||||||||| ||||||||||| |||||||||| ||||| ||| ||| |||||||||||||  |||||||||||||||||||| ||| | |    
T  45658887 tgtgttgtggtttggtgagcgacaaaaatatcagtttttgtcttgtcctttgtctccagtttgtcctgtacttgaaacagttttacaaatcagacactag 45658986  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||| |||||||| | |  ||||||||||||| |||||||||||||||||||    
T  45658987 acaactggagttgttttgtcctgtccttcattttctagcaaatcaaacgcaccc 45659040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 49303462 - 49303309
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| ||||||||||||| |||||||||||||||||||| || ||||||||| ||| |||||||| | || ||||||||||||||||||||||||| |||    
T  49303462 tgtgctgtggtttggtgaaggacaaaaatatgagtttttctcttgtcccttgtctccagtttgtcttatacctgaaacagttttacaaatcaaacactgg 49303363  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||| |||||||||| | |  ||| ||| |||||||||||||||||||||||||    
T  49303362 acaattagagttgttttgtcttgtactttattttttagcaaatcaaacgcaccc 49303309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 42705372 - 42705192
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgt-cctgtcccttgcctctagtttgtcctgtagct 99  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| | || |||||||| ||| ||||||||||||| ||    
T  42705372 gacaacttgtacgtgggacgaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttttttcccgtcccttgtctccagtttgtcctgtacct 42705273  T
Q  100 gaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||||||||||||||| || ||||  ||||||||| |   || | ||| ||||||| |||||||||||||||||    
T  42705272 gaaacagttttacaaatcaaacactgaacaatcagagttgttatgacatattctttattttttcgcaaatcaaacgcaccc 42705192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 27 - 174
Target Start/End: Complemental strand, 6144094 - 6143947
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    ||||||||||||||  |||||||||||||   |||||||||||||||||||||||| |||||||| |||  ||||||| |||||||||||||||||||||    
T  6144094 tgtgttgtggtttgccgagggacaaaaattgcagtttttgtcctgtcccttgcctccagtttgtcatgtctctgaaactgttttacaaatcaaacattgg 6143995  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaac 174  Q
    ||||||  ||||||||| |  ||||||||||||| || ||||||||||    
T  6143994 acaactgcagttgttctgtcctgtccttcattttgtatcaaatcaaac 6143947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 47 - 178
Target Start/End: Original strand, 8838983 - 8839114
Alignment:
Q  47 gacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaactagagttgttctatt 146  Q
    ||||||||||| |||||||||| ||||| || |||| |||||||| |||| | ||||||||||||||||||||||||||||||| | |||||||||| |     
T  8838983 gacaaaaatatcagtttttgtcatgtccatttcctccagtttgtcttgtaccagaaacagttttacaaatcaaacattggacaattggagttgttctgtc 8839082  T
Q  147 atgtccttcattttttagcaaatcaaacgcac 178  Q
     |||||||||||||||||||||||||||||||    
T  8839083 ttgtccttcattttttagcaaatcaaacgcac 8839114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 15539998 - 15539845
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| |||||||||||||  ||||||| | | || |||||||||||| |||||||| ||||||| ||||   |||||||||||||||||||||||| |||    
T  15539998 tgtgctgtggtttggtgaaagacaaaagtttcaggttttgtcctgtctcttgcctccagtttgttctgtccttgaaacagttttacaaatcaaacactgg 15539899  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||| |||||||||| |  |||||||||||||||| ||||||||||||||||    
T  15539898 acaactggagttgttctgtcctgtccttcattttttaacaaatcaaacgcaccc 15539845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 16704792 - 16704925
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| ||||||||||| ||||||||||||||  ||||||||| ||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||    
T  16704792 tgtgatgtggtttggtaagggacaaaaatatatgtttttgtcgtgtcccttgcctccagtttgtcatgtacctgaaacagttttacaaatcaaacattgg 16704891  T
Q  127 acaactagagttgttctattatgtccttcatttt 160  Q
    |||| |  ||||||||| |  ||||||| |||||    
T  16704892 acaattgaagttgttctgtcctgtcctttatttt 16704925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 36 - 174
Target Start/End: Complemental strand, 3414952 - 3414814
Alignment:
Q  36 gtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaactaga 135  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||| || |||||| ||| || ||| |||||||||||||||||| |||| || ||||    
T  3414952 gtttggtgagggacaaaaatatgagtttttgtcctgtccctcgtctccagattgtccagtacctaaaatagttttacaaatcaaacactggataattaga 3414853  T
Q  136 gttgttctattatgtccttcattttttagcaaatcaaac 174  Q
    |||||| | | || |||||||| ||||| ||||||||||    
T  3414852 gttgttttgtcatatccttcatattttaacaaatcaaac 3414814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 10384433 - 10384581
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| |||||||| |||| ||||||||||||||||||||||| ||||| |||| || | ||||| ||||| |||||| | |||||||||||||||| | |    
T  10384433 tgtgctgtggtttagtgaaggacaaaaatatgagtttttgtcttgtcctttgcatccaatttgtactgtacctgaaataattttacaaatcaaacactag 10384532  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||||||||      || |||||||||||||||||||||||||||||    
T  10384533 acaactagagttgttc-----agttcttcattttttagcaaatcaaacgcaccc 10384581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 27 - 178
Target Start/End: Original strand, 7837199 - 7837351
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| |||| |||||| | |||||||||  | | |||||||| |||||||||||||||||||||| |||  ||||||||||||||||||||||||| ||     
T  7837199 tgtgatgtgatttggtaatggacaaaaaattcaatttttgtcatgtcccttgcctctagtttgtcatgttcctgaaacagttttacaaatcaaacactga 7837298  T
Q  127 acaactagagttgttctattatgtccttca-ttttttagcaaatcaaacgcac 178  Q
    ||||||  ||||||||||| || ||||||| |||||||||||||||| |||||    
T  7837299 acaactgaagttgttctatcatatccttcatttttttagcaaatcaagcgcac 7837351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 143
Target Start/End: Complemental strand, 13994183 - 13994067
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    ||||||||||||||||||||||||||||| | ||||||||||| || ||||||||| | |||||| |||   |||||||||||||||||||||||| |||    
T  13994183 tgtgttgtggtttggtgagggacaaaaatttcagtttttgtccagttccttgcctccaatttgtcatgtccatgaaacagttttacaaatcaaacactgg 13994084  T
Q  127 acaactagagttgttct 143  Q
    ||||||  |||||||||    
T  13994083 acaactgaagttgttct 13994067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 116
Target Start/End: Complemental strand, 20495005 - 20494927
Alignment:
Q  38 ttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaat 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||    
T  20495005 ttggtgatggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacaattttacaaat 20494927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 183
Target Start/End: Original strand, 38663245 - 38663329
Alignment:
Q  99 tgaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacccaaa 183  Q
    |||||||||||||||||||||||| ||||||||| |||||||||| |  |||||||||||||||||||||||||||||| |||||    
T  38663245 tgaaacagttttacaaatcaaacactggacaactggagttgttctgtcttgtccttcattttttagcaaatcaaacgcatccaaa 38663329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 74 - 180
Target Start/End: Original strand, 21071727 - 21071833
Alignment:
Q  74 ccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaa 173  Q
    ||||||||| |||||||| |||| |||||||| |||||||||||||||| ||||||| |  ||||||||| | |||| ||||||| ||||||||||||||    
T  21071727 ccttgcctccagtttgtcatgtacctgaaacaattttacaaatcaaacactggacaattgaagttgttctgtcatgtacttcattctttagcaaatcaaa 21071826  T
Q  174 cgcaccc 180  Q
    |||||||    
T  21071827 cgcaccc 21071833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 101 - 180
Target Start/End: Complemental strand, 40811405 - 40811326
Alignment:
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||| |||||||||  |||||||||| ||||||| | | ||||||||||||||||||||||||||||||||||    
T  40811405 aaacagttttataaatcaaacgctggacaactaaagttgttttgtcatgtccttcattttttagcaaatcaaacgcaccc 40811326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 50382537 - 50382363
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctct---agtttgtcctgtag 97  Q
    |||||||||||||||||||       |||||||||||||||||| |||||||||| | |||||||||||||||| |||||||    |||||||  |||      
T  50382537 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgaaggacaaaaatttcagtttttgtcctgtccattgcctcctccagtttgttatgtcc 50382438  T
Q  98 ctgaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaa 172  Q
    |||||||||||||| |||||||||| |  |||  |||||||||| | |  | ||||||||||| || ||||||||    
T  50382437 ctgaaacagttttaaaaatcaaacactaaacatgtagagttgttttgtattctccttcattttataacaaatcaa 50382363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 61 - 178
Target Start/End: Original strand, 7837474 - 7837592
Alignment:
Q  61 tttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttca-ttt 159  Q
    |||||||| |||||| ||||||||||||||| |||  |||||||||||||| |||||||||| || ||||||  |||| |||||| || ||||||| |||    
T  7837474 tttttgtcatgtcccctgcctctagtttgtcatgttcctgaaacagttttataaatcaaacactgaacaactgaagttattctatcatatccttcatttt 7837573  T
Q  160 tttagcaaatcaaacgcac 178  Q
    |||||||||| || |||||    
T  7837574 tttagcaaattaagcgcac 7837592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 38087130 - 38086990
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||| ||||||       |||| |||||||| |||| ||||||||||||||||||||||| ||||| |||| || | ||| |||||||  ||    
T  38087130 gacaacttgtacttgggacaaaaagttgtgatgtggtttagtgaaggacaaaaatatgagtttttgtcatgtccattgcatccattttatcctgtacttg 38087031  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgtt 141  Q
    |||| |||||| ||||||||||  ||||||||  |||||||    
T  38087030 aaactgttttataaatcaaacacaggacaactgaagttgtt 38086990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 25539921 - 25539975
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcct 81  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||    
T  25539921 tgtgttgtggtttggtgagggacaaaaatatcagtttttgtcttgtcctttgcct 25539975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 26733621 - 26733774
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||||| |||||| ||| ||||||| ||| | |||||||||| ||||| | | ||||||||||||| ||     ||||||||||||||||||||||| |     
T  26733621 tgtgttatggtttagtgggggacaagaatttcagtttttgtcatgtccatcgtctctagtttgtccggtcctaaaaacagttttacaaatcaaacatcgt 26733720  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||  ||||||  | |  ||| |||||||||||||||| ||||| ||||||    
T  26733721 acaactgaagttgtcatgtcttgttcttcattttttagcaagtcaaatgcaccc 26733774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 570458 - 570549
Alignment:
Q  31 ttgtggtttggtgagggacaaaaatatgagtttttgtcctgtccc-ttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaac 121  Q
    ||||||||||||||||||||||||| |  |||||| || |||||| ||||||| ||||| || ||| ||||||||| ||||| |||||||||    
T  570458 ttgtggtttggtgagggacaaaaatttctgtttttatcatgtccctttgcctccagtttatcttgtcgctgaaacaattttataaatcaaac 570549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 16643232 - 16643187
Alignment:
Q  135 agttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||| || |||||||||||||||||||||||||||||||||    
T  16643232 agttgttctgttctgtccttcattttttagcaaatcaaacgcaccc 16643187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 25539980 - 25540040
Alignment:
Q  123 ttggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacccaaa 183  Q
    |||||||||| |||||||||| |  | ||||||||||| ||||||||||||||||||||||    
T  25539980 ttggacaactggagttgttctgtcctatccttcattttctagcaaatcaaacgcacccaaa 25540040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 6771434 - 6771529
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaaca 122  Q
    ||||||||| ||| ||||| ||||| ||| | |||||||||| ||||||||| ||||| ||| || |||  || ||||||||||| ||||||||||    
T  6771434 tgtgttgtgatttagtgagtgacaagaattttagtttttgtcttgtcccttgtctctaatttatcatgtccctaaaacagttttataaatcaaaca 6771529  T

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Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 504499 - 504405
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaac 121  Q
    |||||| |||||| ||||| ||||||| | | |||||||||  ||||||||||||| |||||||| |||  || ||||| |||| ||||||||||    
T  504499 tgtgttatggtttagtgagagacaaaattttcagtttttgtgttgtcccttgcctcaagtttgtcttgtccctaaaacaattttgcaaatcaaac 504405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 23799645 - 23799604
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtc 68  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  23799645 tgtgctgtggtttggtgagggacaaaaatatcagtttttgtc 23799604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 121
Target Start/End: Complemental strand, 25343310 - 25343222
Alignment:
Q  34 tggtttggtgagggacaaaaatatgagtttttgtcctgtccctt-gcctctagtttgtcctgtagctgaaacagttttacaaatcaaac 121  Q
    |||||| |||| ||||||||||||| |||||| |||| ||| || || || |||||||||||||  |||||| |||||| |||||||||    
T  25343310 tggtttagtgaaggacaaaaatatgtgtttttatcctatccatttgcatccagtttgtcctgtatatgaaactgttttataaatcaaac 25343222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 2761664 - 2761569
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaaca 122  Q
    ||||||||||||| |||||||| | |||  |  ||||||||  ||||||||||||||||||| || ||| ||  ||||| |||||||||| |||||    
T  2761664 tgtgttgtggtttagtgagggatataaaattttgtttttgttttgtcccttgcctctagtttatcatgtcgcataaacaattttacaaattaaaca 2761569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 177
Target Start/End: Original strand, 33316499 - 33316615
Alignment:
Q  61 tttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcatttt 160  Q
    |||||||  |||| ||||| || |||||||  |||  ||||||||| |||||| |||||| | || | ||||||||||| | | |   ||||||||||||    
T  33316499 tttttgttttgtctcttgcgtccagtttgttttgtccctgaaacagatttacagatcaaatactgtagaactagagttgctatgtatcgtccttcatttt 33316598  T
Q  161 ttagcaaatcaaacgca 177  Q
    |||||| ||||||||||    
T  33316599 ttagcagatcaaacgca 33316615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 46815717 - 46815685
Alignment:
Q  148 tgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||||||||||| |||||||||||||    
T  46815717 tgtccttcattttttagcagatcaaacgcaccc 46815685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 139; Significance: 1e-72; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 36769629 - 36769450
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  36769629 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctg 36769530  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  36769529 aaacagttttacaaatcaaacactggacaactagagttgttctattctgtccttcattttttagcaaatcaaacacaccc 36769450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 43158746 - 43158567
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  43158746 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtaagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctg 43158647  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| |||||||||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  43158646 aaacagttttacaaatcaaacactggacaactagagttgttctgtcttgtccttcattttttagcaaatcaaacgcaccc 43158567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 10932617 - 10932438
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  10932617 gacaacttgtacgtgggacaaaaagttgtgttgtagtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctg 10932518  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| || ||||||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  10932517 aaacagttttacaaatcaaacactgaacaactagagttgttctgtcctgtccttcattttttagcaaatcaaacgcaccc 10932438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 11321945 - 11321769
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||    
T  11321945 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtccgttgcctccagtttgtcctgtacctg 11321846  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgca 177  Q
    || |||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||    
T  11321845 aatcagttttacaaatcaaacattggacaactagagttgttctgtcatgttcttcattttttagcaaatcaaacgca 11321769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 26994285 - 26994105
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||| |||    
T  26994285 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagattttgtcctgtcccttgcctccagtttgtcatgtacctg 26994186  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccca 181  Q
    |||||||||||||||||||||| |||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||    
T  26994185 aaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaacgcaccca 26994105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 40753190 - 40753369
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  40753190 gacaacttgtacgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctg 40753289  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||||||||||||||||||||||| ||||||||||| | |||||| | |||||||||||||||||||||||||    
T  40753290 aaacagttttacaaatcaaacattggacaacgagagttgttctgtcatgtcccttattttttagcaaatcaaacgcaccc 40753369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 27 - 181
Target Start/End: Complemental strand, 47316732 - 47316578
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||| |||    
T  47316732 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacaattttacaaatcaaacactgg 47316633  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccca 181  Q
    |||||||||||| |||| | || ||||||||||||||||||||||||||||||||    
T  47316632 acaactagagttattctgtcatatccttcattttttagcaaatcaaacgcaccca 47316578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 47953225 - 47953404
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||    
T  47953225 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtacctg 47953324  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| |||||||||||||||||||| |  |||| ||||||||||||||||||||||||||||    
T  47953325 aaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtcgttcattttttagcaaatcaaacgcaccc 47953404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 11250678 - 11250831
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||| |||||||||| ||||| |||    
T  11250678 tgtgttgtggtttggtgagggacaaaaatatgattttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacaattttacaaatgaaacactgg 11250777  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  11250778 acaactagagttgttctgtcatgtccttcattttttagcaaatcaaacgcaccc 11250831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 21784906 - 21785082
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||  |||    
T  21784906 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtctcttgcctccagtttgtcatgtgcctg 21785005  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgca 177  Q
    |||||||||||||||||||||| || ||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  21785006 aaacagttttacaaatcaaacactgaacaactagagttgttctgtcatgtccttcattttttagcaaatcaaacgca 21785082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 41211260 - 41211081
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  41211260 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcttgtacctg 41211161  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| ||| ||||| |||||||||| |  |||||||||||||||||||||||||||| ||||    
T  41211160 aaacagttttacaaatcaaacactgggcaacttgagttgttctgtcctgtccttcattttttagcaaatcaaacgtaccc 41211081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 4 - 178
Target Start/End: Complemental strand, 3922760 - 3922586
Alignment:
Q  4 aacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaa 103  Q
    ||||||||||||||||       |||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||    
T  3922760 aacttgtacgtgggacaaaaagttgtgctgtggtttggtgaggaacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcctgtacctgaaa 3922661  T
Q  104 cagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    ||||||||||||| ||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  3922660 cagttttacaaataaaacactggacaactagagttgttctgtcatgtccttcattttttagcaaatcaaacgcac 3922586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 1870170 - 1870349
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||| |||    
T  1870170 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttatcttgtacctg 1870269  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| || |||||||||||||||||    |||||||||||||||||||||||||| ||||||    
T  1870270 aaacagttttacaaatcaaacactgaacaactagagttgttctgcactgtccttcattttttagcaaatcaaatgcaccc 1870349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 26371869 - 26371690
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  26371869 gacaacttgtacgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctg 26371770  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||| |||||| ||||||||||| |||||||||||||||||||| |  | |||||||||||||||||||||||||||||||    
T  26371769 aaatagttttgcaaatcaaacactggacaactagagttgttctgtcctatccttcattttttagcaaatcaaacgcaccc 26371690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 27 - 181
Target Start/End: Complemental strand, 30849280 - 30849126
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| || ||||||||||||||||||| ||||||    
T  30849280 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgccaccagtttgtcctgtacctaaaacagttttacaaatcaatcattgg 30849181  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccca 181  Q
    ||||||||| ||||||| |  |||||||||||||||| |||||||||||||||||    
T  30849180 acaactagaattgttctgtcttgtccttcattttttaacaaatcaaacgcaccca 30849126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 44748730 - 44748906
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       ||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||| |||    
T  44748730 gacaacttgtacgtgggacaaaaagttgtattgtggtttggtgagggacaaaaatttgagtttttgttctgtcccttgcctctagtttgtcatgtacctg 44748829  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgca 177  Q
    |||||||||||||||||||||| |||||||||||||||||| | |  ||||||| ||||||||||||||||||||||    
T  44748830 aaacagttttacaaatcaaacactggacaactagagttgttttgtcctgtcctttattttttagcaaatcaaacgca 44748906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 18386560 - 18386738
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||| |||    
T  18386560 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttt-gtcctgtcccttgcctccagtttgtcatgtacctg 18386658  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| |||||||||||| ||||||| |  ||||||||||||||||||||||||||| |||||    
T  18386659 aaacagttttacaaatcaaacactggacaactagaattgttctgtcctgtccttcattttttagcaaatcaaacacaccc 18386738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 2 - 180
Target Start/End: Original strand, 16963174 - 16963352
Alignment:
Q  2 acaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctga 101  Q
    ||||||||||||||||||       ||| |||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||    
T  16963174 acaacttgtacgtgggacaaaaagttgtattgtggtttgataagggacaaaaatatgagtttttgtcctatcccttgcctctagtttgtcatgtacctga 16963273  T
Q  102 aacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||||||||||||| ||||||| |||||||||||| |  |||||||||||||||| ||||||||||||||||    
T  16963274 aacagttttacaaatcaaacactggacaattagagttgttctgtcctgtccttcattttttaacaaatcaaacgcaccc 16963352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 29661384 - 29661536
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||| ||||| ||||||||||||| |||    
T  29661384 tgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcatgtacctgaatcagttctacaaatcaaacactgg 29661483  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||| | | |||||||||||||||||||||||||||||||    
T  29661484 acaactagagttgttcta-tctatccttcattttttagcaaatcaaacgcaccc 29661536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 43189302 - 43189124
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||| |||    
T  43189302 gacaacttgtacgtgggataaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttacctccagtttgtcctgtacctg 43189203  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacc 179  Q
    ||||| ||||| |||||||||| |||||||||||||||||| | | ||||||| |||||||||||||||||||||||||    
T  43189202 aaacatttttataaatcaaacactggacaactagagttgttttgtcatgtcctccattttttagcaaatcaaacgcacc 43189124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 38301403 - 38301557
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||| |||    
T  38301403 tgtgttgtggtttgctgagggacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactgg 38301502  T
Q  127 acaactagagttgttctattatgtccttca-ttttttagcaaatcaaacgcaccc 180  Q
    |||| | |||||||||| |  ||||||||| ||||||||||||||||||||||||    
T  38301503 acaattggagttgttctgtcctgtccttcatttttttagcaaatcaaacgcaccc 38301557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 46633732 - 46633906
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||||||| ||||||||||||||||||| ||| |||     | ||||||||||||| |||    
T  46633732 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggataaaaatatgagtttttgtcttgttcct-----ccagtttgtcctgtatctg 46633826  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  46633827 aaacagttttacaaatcaaacactggacaactagagttgttctgtcatgtccttcattttttagcaaatcaaacgcaccc 46633906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 18470719 - 18470888
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       | || |||||||||||||| |||||||||||||||||||||||||||  ||||||| ||||||||||||| |||    
T  18470719 gacaacttgtacgtgggacaaaaagttatgctgtggtttggtgagagacaaaaatatgagtttttgtcctgtc--ttgcctccagtttgtcctgtacctg 18470816  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaa 172  Q
    |||||||||||||||||||||| | ||||||||||||||||||||  ||||||||||||| |||||||||||    
T  18470817 aaacagttttacaaatcaaacactcgacaactagagttgttctatcctgtccttcattttgtagcaaatcaa 18470888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 27 - 179
Target Start/End: Original strand, 48894778 - 48894930
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| |||||||| ||||  ||||||||||||||||||||||||||||||||| || ||||||| ||||| |||||||| |||||||||||||||| |||    
T  48894778 tgtgatgtggtttagtgaatgacaaaaatatgagtttttgtcctgtcccttgcatccagtttgtactgtacctgaaacaattttacaaatcaaacactgg 48894877  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacc 179  Q
    |||||| |||||||||| |  ||||||||||||||||||||||||||||||||    
T  48894878 acaactggagttgttctgtcctgtccttcattttttagcaaatcaaacgcacc 48894930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 43368236 - 43368415
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||| ||||       |||| ||||||||| ||||| |||||||||| ||||||||||| ||| |||||||| |||||||||| || |||    
T  43368236 gacaacttgtacgtaggacaaaaagttgtgctgtggtttgctgaggcacaaaaatatcagtttttgtcccgtctcttgcctccagtttgtcctatacctg 43368335  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| ||||||||| |||||||||| |  |||||||||||||||||||||||||||| ||||    
T  43368336 aaacagttttacaaatcaaacactggacaactggagttgttctgtcctgtccttcattttttagcaaatcaaacggaccc 43368415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 17237137 - 17237290
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    ||||||||||||| ||||  |||||||||||||||||||||| ||| |||||| || ||||||| ||||| |||||| | |||||||||||||||| |||    
T  17237137 tgtgttgtggtttagtgaatgacaaaaatatgagtttttgtcatgttccttgcatccagtttgtactgtacctgaaataattttacaaatcaaacactgg 17237236  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||||||||||    
T  17237237 acaactggagttgttctgtcatgtccttcattttttagcaaatcaaacgcaccc 17237290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 32873829 - 32873654
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||| |||       |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||| ||| |||    
T  32873829 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgaaggacaaaaatatgagtttttgtcctgtcccttgcctccagtttatccggtacctg 32873730  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacc 179  Q
    ||||| |||||||||||||||| ||||||||||||   ||| | |  ||||||||||||||||||||||||||| ||||    
T  32873729 aaacaattttacaaatcaaacaatggacaactaga---gttttgtcctgtccttcattttttagcaaatcaaacacacc 32873654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 9913586 - 9913738
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| |||||||||||||| ||||||| ||| | |||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||  ||    
T  9913586 tgtgatgtggtttggtgagcgacaaaa-tatcaatttttgtcctgtcccttgcctctagtttatcctgtacctgaaatagttttacaaatcaaacaccgg 9913684  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||| |||||||||| |  |||||||||||||||||||||||||| ||||||    
T  9913685 acaactggagttgttctgtcctgtccttcattttttagcaaatcaaatgcaccc 9913738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 9927274 - 9927426
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| |||||||||||||| ||||||| ||| | |||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||  ||    
T  9927274 tgtgatgtggtttggtgagcgacaaaa-tatcaatttttgtcctgtcccttgcctctagtttatcctgtacctgaaatagttttacaaatcaaacaccgg 9927372  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||| |||||||||| |  |||||||||||||||||||||||||| ||||||    
T  9927373 acaactggagttgttctgtcctgtccttcattttttagcaaatcaaatgcaccc 9927426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 11822284 - 11822437
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    ||||||||||||| |||| ||||||||||||||||||||||| |||||||||| || ||||||||||||| || |||||||||||| ||||||||| |||    
T  11822284 tgtgttgtggtttagtgaaggacaaaaatatgagtttttgtcatgtcccttgcatccagtttgtcctgtacctcaaacagttttacgaatcaaacactgg 11822383  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||| |  ||||||||| |  ||||||| ||||||||| |||||||||||||||    
T  11822384 acaagtgaagttgttctgtcctgtcctttattttttagtaaatcaaacgcaccc 11822437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 27 - 177
Target Start/End: Original strand, 20127350 - 20127500
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| ||||||||| ||||| |||||||||| || ||||||||||||||||||||| ||||||||||||| |||||| ||||||| |||||||||| |||    
T  20127350 tgtgatgtggtttgctgaggaacaaaaatatcagcttttgtcctgtcccttgcctccagtttgtcctgtacctgaaatagttttaaaaatcaaacactgg 20127449  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgca 177  Q
    |||||| |||||||||| |  | || ||||||| |||||||||||||||||    
T  20127450 acaactggagttgttctgtcctatctttcatttattagcaaatcaaacgca 20127500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 30599042 - 30598939
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||| |||    
T  30599042 tgtgttgtggtttgatgagggacaaaaatatgagcttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatgaaacagtgg 30598943  T
Q  127 acaa 130  Q
    ||||    
T  30598942 acaa 30598939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 27 - 181
Target Start/End: Original strand, 1363697 - 1363851
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| ||||||||| |||||||||||||||| || ||||||| ||||||||||||| |||||||||||||  ||||||| |||||||||||||||| |||    
T  1363697 tgtgatgtggtttgatgagggacaaaaatatcagcttttgtcatgtcccttgcctccagtttgtcctgtacatgaaacaattttacaaatcaaacactgg 1363796  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccca 181  Q
    ||||||  ||||||| | |  | ||||| |||||||||||||||||| |||||||    
T  1363797 acaactgaagttgttttgtcctatcctttattttttagcaaatcaaaggcaccca 1363851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 26910470 - 26910293
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||| |||       ||||||||||||||| |||||||||||||   ||||||| |||||||||||||||| |||||| |||||  |||    
T  26910470 gacaacttgtacgtgtgacaaaaagttgtgttgtggtttggcgagggacaaaaattgcagtttttatcctgtcccttgcctccagtttgccctgtccctg 26910371  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacc 179  Q
    |||| ||||||||||||||||| |||||||||  ||||||||| | |||||||||| ||| || |||||||||||||||    
T  26910370 aaactgttttacaaatcaaacactggacaactgtagttgttctgtcatgtccttca-tttatatcaaatcaaacgcacc 26910293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 43213985 - 43213805
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||| |||||||       |||||||||||||||||| |||||||||||| || |||| || ||||||||||||  ||||||||||||| |||    
T  43213985 gacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgaaggacaaaaatatcagcttttatcttgtcccttgccttcagtttgtcctgta-ctg 43213887  T
Q  101 aaa-cagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccca 181  Q
    ||| ||||||||||||||||||| | |||||||  ||||||||| |  ||| |||||||||||||||||||||||| |||||    
T  43213886 aaaacagttttacaaatcaaacactagacaactgaagttgttctgtcctgttcttcattttttagcaaatcaaacgtaccca 43213805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 23349351 - 23349207
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||| |||||||       ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||| ||||  ||    
T  23349351 gacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttgttctgtcccttgcctccagtttgtcatgtacttg 23349252  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctat 145  Q
    ||| |||||||||| ||||||| ||||||||| |||| |||||||    
T  23349251 aaatagttttacaattcaaacactggacaactggagtagttctat 23349207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 30 - 180
Target Start/End: Complemental strand, 22724063 - 22723913
Alignment:
Q  30 gttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggaca 129  Q
    |||||||||||| || ||||||| ||   ||||||||||||||||||| |||| ||||||||| ||  ||||||| ||||||||||||||||| ||||||    
T  22724063 gttgtggtttggcgatggacaaacattgcagtttttgtcctgtcccttacctcgagtttgtccggtccctgaaactgttttacaaatcaaacactggaca 22723964  T
Q  130 actagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||| |||||||||| | |  |||||||||||||| ||||||||||||||||    
T  22723963 actggagttgttctgtcacatccttcattttttatcaaatcaaacgcaccc 22723913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 180
Target Start/End: Original strand, 48445587 - 48445735
Alignment:
Q  32 tgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaac 131  Q
    |||| |||||||| |||||||||| | |||||||||| ||||||||||||| ||||||| ||||  || |||||||||||||||| |||||||||| |||    
T  48445587 tgtgatttggtgaaggacaaaaatttcagtttttgtcatgtcccttgcctccagtttgttctgtccctcaaacagttttacaaattaaacattggataac 48445686  T
Q  132 tagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    | |||||||||| |  | |||||||||||||| ||||| ||||||||||    
T  48445687 tggagttgttctgtcttttccttcattttttaacaaattaaacgcaccc 48445735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 47 - 174
Target Start/End: Original strand, 37967055 - 37967182
Alignment:
Q  47 gacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaactagagttgttctatt 146  Q
    |||||||||||| ||||||||| |||||||||| || | |||||| |||| |||||||||||||||||||||||||  ||| ||||| ||||||| | |     
T  37967055 gacaaaaatatgggtttttgtcttgtcccttgcatccaatttgtcatgtacctgaaacagttttacaaatcaaacaccggagaactaaagttgttttgtc 37967154  T
Q  147 atgtccttcattttttagcaaatcaaac 174  Q
    ||||||||||||||||||||||||||||    
T  37967155 atgtccttcattttttagcaaatcaaac 37967182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 34295464 - 34295290
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||| |||||||||||||||| ||||||||||       ||||||| |||||||| |||| |||    
T  34295464 gacaacttgtacgtgggacaaaaagttgtgctgtggtttgctgagggacaaaaatatcagtttttgtc-------ttgcctccagtttgtcatgtacctg 34295372  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacccaa 182  Q
    |||||||||||||||||||||| |||| |||| |||||||||| |  | || || |||||||||| ||||||||||||||||    
T  34295371 aaacagttttacaaatcaaacactggataactggagttgttctgtcctatcttttattttttagctaatcaaacgcacccaa 34295290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 34519543 - 34519722
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||| ||||||       ||||||||||||||| |||||||||||||   |||||||||||||||||||||||| || ||||| |||  |||    
T  34519543 gacaacttgtacctgggacaaaaagttgtgttgtggtttggcgagggacaaaaattgcagtttttgtcctgtcccttgcctccagcttgtcatgtccctg 34519642  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||| ||||||||| || |||| |||||||||  ||||||||| |  ||||||| ||||||||  |||||||||||||||    
T  34519643 aaactgttttacaattcgaacactggacaactgaagttgttctgtcctgtcctttattttttattaaatcaaacgcaccc 34519722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 46448678 - 46448525
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| |||||||| |||| |||||||||||||||||||| || |||||||||| || ||||||| | ||| |||||||| |||||||||||||||| | |    
T  46448678 tgtgctgtggtttagtgacggacaaaaatatgagtttttatcatgtcccttgcatccagtttgtaccgtacctgaaacaattttacaaatcaaacactag 46448579  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||  |||||||||||  |||| |  |||||||| ||||||||||||||||    
T  46448578 acaactgaagttgttctatcttgtcttctattttttaacaaatcaaacgcaccc 46448525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 3 - 177
Target Start/End: Original strand, 329507 - 329687
Alignment:
Q  3 caacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaa 102  Q
    |||||||||||||||||       |||| |||||||||||||||||||||||| | |||||||||| ||||| ||||||| ||||||| ||||  |||||    
T  329507 caacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatttcagtttttgtcttgtcctttgcctccagtttgttctgtccctgaa 329606  T
Q  103 acagttttacaaatcaaacattggacaac------tagagttgttctattatgtccttcattttttagcaaatcaaacgca 177  Q
    ||||||||||||||||||||  |||||||      | |||||||| | |  |||||||||||||||| |||||||||||||    
T  329607 acagttttacaaatcaaacacgggacaactggagttggagttgttttgtcttgtccttcattttttaacaaatcaaacgca 329687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 3892086 - 3891930
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||| ||||       |||| |||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||           
T  3892086 gacaacttgtacgtaggacaaaaagttgtgctgtgatttggtgagagacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcct------- 3891994  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaa 173  Q
             |||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||    
T  3891993 ---------tacaaatcaaacattggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaa 3891930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 27 - 161
Target Start/End: Original strand, 21133433 - 21133567
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| ||||||||  ||||||| || ||||| |||||||||| ||||||||||||  |||||||||||||  |||||||||||||||||| |||||||      
T  21133433 tgtgatgtggtttattgagggaaaataatatcagtttttgtcttgtcccttgccttcagtttgtcctgtacttgaaacagttttacaaattaaacattaa 21133532  T
Q  127 acaactagagttgttctattatgtccttcattttt 161  Q
    | ||||||||||||||||| || ||||||||||||    
T  21133533 ataactagagttgttctatcatttccttcattttt 21133567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 61 - 178
Target Start/End: Original strand, 26700572 - 26700689
Alignment:
Q  61 tttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcatttt 160  Q
    |||||||||| || |||||||| |||||||| |||| ||||||||||| ||||||||||||| ||||||||| || ||||| | | ||||||||||||||    
T  26700572 tttttgtcctttctcttgcctccagtttgtcatgtacctgaaacagttatacaaatcaaacactggacaactggaattgttatgtcatgtccttcatttt 26700671  T
Q  161 ttagcaaatcaaacgcac 178  Q
    ||| ||||||||||||||    
T  26700672 ttaccaaatcaaacgcac 26700689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 22724591 - 22724449
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       || | ||||||||||||||||||||||||   || ||||||| | ||||||||||| ||||||||||||  |||    
T  22724591 gacaacttgtacgtgggacataaagttgcgctgtggtttggtgagggacaaaaattgcagcttttgtcatatcccttgcctccagtttgtcctgtccctg 22724492  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttct 143  Q
    |||| ||||||||||||||||  || |||||| || |||||||    
T  22724491 aaactgttttacaaatcaaacgctgaacaactggaattgttct 22724449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 179
Target Start/End: Complemental strand, 15035287 - 15035133
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacag--ttttacaaatcaaacatt 124  Q
    ||||||||||| |||||||| |||| ||| | | |||| ||||||||| |||| || ||||||||||||   || | |||  |||||||||| |||||||    
T  15035287 tgtgttgtggtctggtgaggaacaagaatttcaattttcgtcctgtcctttgcttccagtttgtcctgtccttggagcagttttttacaaattaaacatt 15035188  T
Q  125 ggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacc 179  Q
    | | || |||||||||  | | ||||  |||||||||||||||||||||||||||    
T  15035187 gtataattagagttgtcatgtcatgtatttcattttttagcaaatcaaacgcacc 15035133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 46408950 - 46408999
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtccctt 77  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  46408950 tgtgctgtggtttggtgagggacaaaaatatgag-ttttgtcctgtccctt 46408999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 34117513 - 34117581
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgta 96  Q
    |||| |||||||||||||||||||||||||||||||||| || | | ||||||||  |||||||||||||    
T  34117513 tgtgatgtggtttggtgagggacaaaaatatgagtttttatcatat-ccttgccttaagtttgtcctgta 34117581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 41223320 - 41223400
Alignment:
Q  99 tgaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacc 179  Q
    ||||||||||||||||||||||||  | ||||   || ||||| ||| || ||||||||||||||||| ||||||||||||    
T  41223320 tgaaacagttttacaaatcaaacacggaacaatcggaattgttttatcatatccttcattttttagcatatcaaacgcacc 41223400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 21408625 - 21408526
Alignment:
Q  63 tttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcatttttt 162  Q
    |||||| ||||||||||||| |||||||  |||  |  |||||| ||||||||||||| |||| |||||||||| |||  | | ||||||||||||||||    
T  21408625 tttgtcatgtcccttgcctccagtttgtgttgtcccaaaaacagctttacaaatcaaatattgtacaactagagatgtcatgtcatgtccttcatttttt 21408526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 22631801 - 22631853
Alignment:
Q  29 tgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcct 81  Q
    |||||||||||||||| |||||||||||| |||| |||||  |||||||||||    
T  22631801 tgttgtggtttggtgaaggacaaaaatatcagttattgtcgcgtcccttgcct 22631853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 2049014 - 2049109
Alignment:
Q  29 tgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacatt 124  Q
    ||||||||||| |||| |||||||||| |   |||||||  ||| ||||||||||||||||||| ||  |  ||||| |||| |||||||||||||    
T  2049014 tgttgtggtttagtgatggacaaaaatttatatttttgttatgttccttgcctctagtttgtcccgtcccaaaaacaatttttcaaatcaaacatt 2049109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 120
Target Start/End: Complemental strand, 3359837 - 3359778
Alignment:
Q  61 tttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaa 120  Q
    |||||||| |||||||| |||||||||| || |||  | |||||||||||||||||||||    
T  3359837 tttttgtcatgtcccttacctctagtttatcttgtgccagaaacagttttacaaatcaaa 3359778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 26652901 - 26652965
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagttttt 65  Q
    |||||||||||||||||||       |||| ||||||||| |||||||||||||||| |||||||    
T  26652901 gacaacttgtacgtgggacaaaaagttgtgctgtggtttgctgagggacaaaaatatcagttttt 26652965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 180
Target Start/End: Complemental strand, 41665573 - 41665479
Alignment:
Q  86 tttgtcctgtagctgaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||   ||||||||||||| || | ||||| ||||||||| |||||||||| |  | ||||| ||| |||| |||||||||| |||||    
T  41665573 tttgtcctgttcttgaaacagttttataattgaaacactggacaactggagttgttctgtcctatcctttattatttatcaaatcaaacacaccc 41665479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 29372813 - 29372764
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtccct 76  Q
    ||||||||||||| |||| |||||||||| | |||||||||| |||||||    
T  29372813 tgtgttgtggtttagtgacggacaaaaattttagtttttgtcgtgtccct 29372764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 131; Significance: 6e-68; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 34794918 - 34795097
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||| ||||||||||       |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  34794918 gacaacttatacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctg 34795017  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||    
T  34795018 aaacagttttacaaatcaaatattggacaactagagttgttctgtcatgtccttcattttttaacaaatcaaacgcaccc 34795097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 35701336 - 35701487
Alignment:
Q  29 tgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggac 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||| |||||    
T  35701336 tgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtaccagaaacagttttacaaatcaaacactggac 35701435  T
Q  129 aactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  35701436 aactagagttgttctatcttgtccttcattttttagcaaatcaaacgcaccc 35701487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 180
Target Start/End: Complemental strand, 7770342 - 7770165
Alignment:
Q  3 caacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaa 102  Q
    |||||||||||||||||       |||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||    
T  7770342 caacttgtacgtgggacaaaaagttgtgctgtggtttggtgaaggacaaaaatatgtgtttttgtcctgtcccttgcctccagtttgtcctgtacctgaa 7770243  T
Q  103 acagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7770242 acaattttacaaatcaaacactggacaactagagttgttctatcatgtccttcattttttagcaaatcaaacgcaccc 7770165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 32528746 - 32528923
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||    
T  32528746 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgtctccagtttgtcctgtacctg 32528845  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    |||||||||||||||||||||| || |||||||||||||| || | ||||||||||||||||||||||||||||||||    
T  32528846 aaacagttttacaaatcaaacactgaacaactagagttgtcctgtcatgtccttcattttttagcaaatcaaacgcac 32528923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 11963372 - 11963551
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||| |||||||||       |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||    
T  11963372 gacaacttgcacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtacctg 11963471  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| |||||||||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  11963472 aaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaacgcaccc 11963551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 8136868 - 8137047
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||| ||||       ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||    
T  8136868 gacaacttgtacgtaggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtctcttgcctccagtttgtcctgtatctg 8136967  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||||||| |||||| |||||||||||||||||||| |  | |||||||||||||||||||||||||||||||    
T  8136968 aaacagttttacaaaacaaacactggacaactagagttgttctgtcctatccttcattttttagcaaatcaaacgcaccc 8137047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 32 - 178
Target Start/End: Complemental strand, 24181658 - 24181512
Alignment:
Q  32 tgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaac 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  24181658 tgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttggctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaac 24181559  T
Q  132 tagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    |||||||||| | | ||||||||||||||||||||||||||||||||    
T  24181558 tagagttgttttgtcatgtccttcattttttagcaaatcaaacgcac 24181512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 180
Target Start/End: Complemental strand, 4689761 - 4689584
Alignment:
Q  3 caacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaa 102  Q
    |||||||||||||||||       |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||| |||||    
T  4689761 caacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgtgtttttgtcctgtcccttgcctccagtttgtcttgtacctgaa 4689662  T
Q  103 acagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||| |||||||||  ||||||||| | ||||||||||||||||||||||||||||| ||||    
T  4689661 acagttttacaaatcaaacactggacaactgaagttgttctgtcatgtccttcattttttagcaaatcaaacgaaccc 4689584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 7523203 - 7523376
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  7523203 gacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctg 7523302  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaac 174  Q
    |||||||||||||||||||||| |||||||||||| ||||||| |  | |||||||||||||||||||||||||    
T  7523303 aaacagttttacaaatcaaacactggacaactagaattgttctgtcctatccttcattttttagcaaatcaaac 7523376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 31880141 - 31879962
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||| ||||       |||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||    
T  31880141 gacaacttgtacgtaggacaaatagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcacttgcctccagtttgtcctgtacctg 31880042  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||| ||||||||| || ||||||||||||||| |||  |||||||||||||||||||||||||||||||||    
T  31880041 aaacagttttactaatcaaacactgaacaactagagttgttatatcttgtccttcattttttagcaaatcaaacgcaccc 31879962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 39918538 - 39918717
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||| |||       |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||    
T  39918538 gacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcttgtatctg 39918637  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| |||||||||||||||||  | |  |||||||||||||||||||||||||||||||||    
T  39918638 aaacagttttacaaatcaaacactggacaactagagttgtcttgtcctgtccttcattttttagcaaatcaaacgcaccc 39918717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 31770656 - 31770480
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||  ||    
T  31770656 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggataaaaatatgagtttttgtcctgtcccttgcctccagtttgtcttgtacatg 31770557  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgca 177  Q
    |||||||||||||||||||||| || ||||||||||||||| | | |||||||| ||||||||||||||||||||||    
T  31770556 aaacagttttacaaatcaaacactgaacaactagagttgttatgtcatgtcctttattttttagcaaatcaaacgca 31770480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 2351711 - 2351890
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| || ||     
T  2351711 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcacttgcctccagtttgtcctatacctt 2351810  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| || |||||||||||||| || |  |||||||||||||||||||||||||||||||||    
T  2351811 aaacagttttacaaatcaaacactgaacaactagagttgtcctgtcctgtccttcattttttagcaaatcaaacgcaccc 2351890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 39788224 - 39788401
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||| |||    
T  39788224 gacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcctttgcctacagtttgtcctgtacctg 39788323  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    |||||||||||||||||||| | |||||||||||| ||||||| |  ||||||| |||||||| ||||||||||||||    
T  39788324 aaacagttttacaaatcaaatactggacaactagaattgttctgtcctgtcctttattttttaacaaatcaaacgcac 39788401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 7208295 - 7208116
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||| |||       |||| ||||||||||||||||||||||||||||||||| || ||||| ||||| || ||||||||| ||| |||    
T  7208295 gacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttggttctgtctcttgcatccagtttgtcccgtacctg 7208196  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| |||||||||| ||||||||| || |||||||||||||||||||||||||| ||||||    
T  7208195 aaacagttttacaaatcaaacactggacaactaaagttgttctgttctgtccttcattttttagcaaatcaaatgcaccc 7208116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 34 - 180
Target Start/End: Original strand, 41459653 - 41459798
Alignment:
Q  34 tggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaacta 133  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||| ||||||||||||||||||||||| | |  |||||||    
T  41459653 tggtttggtgagggacaaaaatatgagttttt-tcttgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaatactaaacaacta 41459751  T
Q  134 gagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||    
T  41459752 gagttgttctgtcatgtccttcattttttagcaaatcaaacgcaccc 41459798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 3735388 - 3735565
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||| |||||||||||| |||||||||||||||| ||||||| | |||||| |||| |||    
T  3735388 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgatggacaaaaatatcagtttttgtcctgtccattgcctccattttgtcatgtacctg 3735487  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    |||| ||||||||||||||||| ||||||||| |||||||||| | |||| |||||||||||||||||||||||||||    
T  3735488 aaacggttttacaaatcaaacactggacaactggagttgttctgtcatgttcttcattttttagcaaatcaaacgcac 3735565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 27 - 178
Target Start/End: Complemental strand, 23091343 - 23091192
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| ||||| ||||||| ||||||||||||||||||||||||| |||    
T  23091343 tgtgttgtggtttgatgacggacaaaaatatgagtttttgtcttgtcccttgcctccagtttatcctgtacctgaaacagttttacaaatcaaacactgg 23091244  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    |||||| |||| ||| |||  |||| ||||||||||||||||||||||||||    
T  23091243 acaacttgagtagttatatcttgtcattcattttttagcaaatcaaacgcac 23091192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 3 - 179
Target Start/End: Original strand, 29241411 - 29241587
Alignment:
Q  3 caacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaa 102  Q
    |||||||||||||||||       |||| |||||||||| |||||||||||||||||| ||||| ||||||||||||||| | |||||| |||| |||||    
T  29241411 caacttgtacgtgggacaaaaagttgtgctgtggtttggcgagggacaaaaatatgagcttttggcctgtcccttgcctccaatttgtcatgtacctgaa 29241510  T
Q  103 acagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacc 179  Q
    |||||||||||||||||||| ||||||||||||||||||||    || |||||||||||||||||||||||||||||    
T  29241511 acagttttacaaatcaaacactggacaactagagttgttctggcctggccttcattttttagcaaatcaaacgcacc 29241587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 31644477 - 31644656
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| |||||||||||||||||||||||||||||| |||||| || | |||||||| ||||||||||||| |||    
T  31644477 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtatttgtcttg-ctcttgcctccagtttgtcctgtacctg 31644575  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcatttttt-agcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| |||||||||||||||||||| |   |||||||||||||| ||||||||||||||||||    
T  31644576 aaacagttttacaaatcaaacactggacaactagagttgttctgtcccgtccttcattttttaagcaaatcaaacgcaccc 31644656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 21739226 - 21739093
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  21739226 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctg 21739127  T
Q  101 aaacagttttacaaatcaaacattggacaactag 134  Q
    |||||||||||||||||||||| |||||||||||    
T  21739126 aaacagttttacaaatcaaacactggacaactag 21739093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 6284363 - 6284188
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||| || ||||||||||||||||| |||||| ||||||||||||| |||    
T  6284363 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaaaataagtttttgtcctgtcccatgcctccagtttgtcctgtacctg 6284264  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    || ||||||||||||||||||| |||||||||| |||| |||  |   ||||||||||||||| ||||||||||||||    
T  6284263 aagcagttttacaaatcaaacactggacaactaaagttattc--tcccgtccttcattttttaacaaatcaaacgcac 6284188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 553428 - 553601
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       ||||||||||||||||||| |||||||||||||||||||||| |||| |||||||| |||||||||||||  ||    
T  553428 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagagacaaaaatatgagtttttgtcttgtctcttgcctccagtttgtcctgtacttg 553527  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaac 174  Q
    ||||||||||| |||||||||| | ||||| || ||||||||| | || | |||||||||||||||||||||||    
T  553528 aaacagttttataaatcaaacactagacaattaaagttgttctgtcatattcttcattttttagcaaatcaaac 553601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 27 - 178
Target Start/End: Original strand, 5598537 - 5598688
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| ||| ||||| ||| ||||||||||||  ||||||||||| ||||||||||| ||||||||  ||| |||||||||||||||||||||||||||||    
T  5598537 tgtgctgttgtttgatgaaggacaaaaatatctgtttttgtcctctcccttgcctccagtttgtctcgtacctgaaacagttttacaaatcaaacattgg 5598636  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    |||||| |||||||||| || ||| |||||||||||||||||||||||||||    
T  5598637 acaacttgagttgttctgttctgtgcttcattttttagcaaatcaaacgcac 5598688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 40489368 - 40489547
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||| |||||||       |||| |||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | || |||    
T  40489368 gacaacttgtatgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaatatgagtttttgtcccgtcccttgcctccagtttgtcttctacctg 40489467  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccca 181  Q
    |||||||||||||||||||||| || |||| ||||||| |||| |  ||||||| ||||||||||||||||||||||||||    
T  40489468 aaacagttttacaaatcaaacactgaacaattagagttattctgtcctgtcctt-attttttagcaaatcaaacgcaccca 40489547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 27 - 173
Target Start/End: Complemental strand, 41790501 - 41790356
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   ||||||| ||||||||||||| ||||||||||||||||||||||||| |||    
T  41790501 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtttattgcctccagtttgtcctgta-ctgaaacagttttacaaatcaaacactgg 41790403  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaa 173  Q
    ||||||| | ||||||| |  |||| ||||||||||||| |||||||    
T  41790402 acaactaaaattgttctgtcctgtctttcattttttagcgaatcaaa 41790356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 22493484 - 22493322
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||| |||       |||| ||||||||||||||||||||||||||||||||||||| ||||| ||| ||| ||||| ||||||| |||    
T  22493484 gacaacttgtacgtgtgacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcttgtcctttggctccagtttatcctgtacctg 22493385  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcatttttta 163  Q
    |||||||||||||||| ||||| |||||||||||||||||||| |  ||||||||||||||||    
T  22493384 aaacagttttacaaattaaacactggacaactagagttgttctgtcctgtccttcatttttta 22493322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 33 - 182
Target Start/End: Complemental strand, 37148622 - 37148473
Alignment:
Q  33 gtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaact 132  Q
    |||||||||||||| |||||||| | ||||||||||| |||||||||||| ||||||| ||||  ||||||||||||||||||||||||| | |||||||    
T  37148622 gtggtttggtgaggaacaaaaatttcagtttttgtcccgtcccttgcctccagtttgttctgtccctgaaacagttttacaaatcaaacaattgacaact 37148523  T
Q  133 agagttgttctattatgtccttcattttttagcaaatcaaacgcacccaa 182  Q
     |||||||||| | || |||||||||||||| ||||||||||||||||||    
T  37148522 ggagttgttctgtcatatccttcattttttaacaaatcaaacgcacccaa 37148473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 24036261 - 24036436
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||||||        |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||| ||||| |||    
T  24036261 gacaacttgtacgtgggataaaaagttgtgatgtggtttggtgagggacaaaaatatgagattttgtcctgtcccttgcctccaatttgtgctgtacctg 24036360  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgca 177  Q
    |||||||||| ||||||||||| ||||||||| || ||||| | |  ||| ||||||||||||||||||||||||||    
T  24036361 aaacagttttccaaatcaaacactggacaacttgaattgttttgtcctgt-cttcattttttagcaaatcaaacgca 24036436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 5571709 - 5571543
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||| ||||       ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||    
T  5571709 gacaacttgtacgttggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgaatttttgtcctgtcccttgcctccagtttgtcctgtacctg 5571610  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
                 ||||||||| |||||||||||||||||| | || |||||||||||||||||||||||||||||||||    
T  5571609 -------------aatcaaacactggacaactagagttgttttgttttgtccttcattttttagcaaatcaaacgcaccc 5571543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 18470493 - 18470314
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||||||        |||| ||||||||||| |||||||||||| | |||||||||| ||||||||||||  ||||||| ||||  |||    
T  18470493 gacaacttgtacgtgggataaaaagttgtgctgtggtttggtaagggacaaaaatttcagtttttgtcttgtcccttgccttcagtttgttctgtccctg 18470394  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| |||| |||| |||||||||| |  |||||||||||||||| ||||||||| ||||||    
T  18470393 aaacagttttacaaatcaaacactggataactggagttgttctgtcttgtccttcattttttaacaaatcaaaagcaccc 18470314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 34 - 180
Target Start/End: Complemental strand, 27839105 - 27838960
Alignment:
Q  34 tggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaacta 133  Q
    |||||||||||||||||||||| |  |||||  |||||||| ||||||  |||||||| |||| ||||||||||||||||||||||||| |||||||||     
T  27839105 tggtttggtgagggacaaaaatttatgtttta-tcctgtccattgccttcagtttgtcatgtacctgaaacagttttacaaatcaaacactggacaactg 27839007  T
Q  134 gagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||| | ||||||||||||||||| ||||||||||||||||    
T  27839006 gagttgttctgtcatgtccttcattttttaacaaatcaaacgcaccc 27838960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 27 - 182
Target Start/End: Complemental strand, 8561021 - 8560866
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| ||||||||||||||| |||||||||| |||||||||| ||||| |||| |  ||||||||||||| ||||||||||||||||||||||||| ||     
T  8561021 tgtgatgtggtttggtgaggaacaaaaatatcagtttttgtcttgtcctttgctttcagtttgtcctgtatctgaaacagttttacaaatcaaacactga 8560922  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacccaa 182  Q
    | ||||  ||||||| | | | ||||||| ||||||||||||||||||||||||||    
T  8560921 ataactgaagttgttatgtcacgtccttcgttttttagcaaatcaaacgcacccaa 8560866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 28090585 - 28090464
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||| | |||| |||    
T  28090585 gacaacttgtacgtgggacaaaaagttgtgttgtagtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgccttgtacctg 28090486  T
Q  101 aaacagttttacaaatcaaaca 122  Q
    ||||||||||||||||||||||    
T  28090485 aaacagttttacaaatcaaaca 28090464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 27 - 154
Target Start/End: Complemental strand, 700640 - 700513
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||||||||||||||||||| |||||||||||| |||||||  ||||||||| |||| ||||||| |||| |||||||||||||||||||||| |||||     
T  700640 tgtgttgtggtttggtgaggaacaaaaatatgaatttttgttttgtcccttgtctcttgtttgtcttgtacctgaaacagttttacaaatcaatcattga 700541  T
Q  127 acaactagagttgttctattatgtcctt 154  Q
    ||||||||||||||| | | ||||||||    
T  700540 acaactagagttgttttgtcatgtcctt 700513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 4818205 - 4818085
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||| |||| |||    
T  4818205 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcttgttccttgcctccagtttgtcttgtacctg 4818106  T
Q  101 aaacagttttacaaatcaaac 121  Q
    |||||||||||||||||||||    
T  4818105 aaacagttttacaaatcaaac 4818085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 22432348 - 22432243
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||| |||||||| ||||| ||||| | |||||||||||||||||||||||||| ||    
T  22432348 tgtgttgtggtttgatgagggacaaaaatatcagtttttgtcctgtctcttgcctccagtttatcctgaacctgaaacagttttacaaatcaaacatagg 22432249  T
Q  127 acaact 132  Q
    ||||||    
T  22432248 acaact 22432243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 7725874 - 7725702
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||| ||||||||||       |||||||||||||  ||| ||||||||||||||||||||||| |||||||||| || ||||||| ||| | |||    
T  7725874 gacaacttatacgtgggacaaaaagttgtgttgtggtttaatgaaggacaaaaatatgagtttttgtcatgtcccttgcatccagtttgttctgcacctg 7725775  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaa 173  Q
    ||||| |||||| ||||||||| |||||||||  ||||||| | |  ||||||| ||||||||||||||||||    
T  7725774 aaacaattttactaatcaaacactggacaactgaagttgttttgtcctgtccttaattttttagcaaatcaaa 7725702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 174
Target Start/End: Complemental strand, 32093020 - 32092874
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| ||||||||||||||| |||||||| | |||||||||||| ||| ||||||| | ||||||||||  |||||||| |||||||||||||||| ||     
T  32093020 tgtgctgtggtttggtgagg-acaaaaatttcagtttttgtcctatcctttgcctccaatttgtcctgttcctgaaacaattttacaaatcaaacactgc 32092922  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaac 174  Q
    |||||| |||||||||| |  ||||||||||||||||  |||||||||    
T  32092921 acaactggagttgttctgtcttgtccttcattttttataaaatcaaac 32092874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 62 - 180
Target Start/End: Original strand, 4664923 - 4665041
Alignment:
Q  62 ttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttt 161  Q
    ||||||| |||||||||||||  |||||||||||  ||||||| ||||||||||||||||| |||| |||| |||||||||| | |||||||||||||||    
T  4664923 ttttgtcatgtcccttgcctcctgtttgtcctgtccctgaaactgttttacaaatcaaacactggataactggagttgttctgtcatgtccttcattttt 4665022  T
Q  162 tagcaaatcaaacgcaccc 180  Q
     | ||||||||||||||||    
T  4665023 aatcaaatcaaacgcaccc 4665041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 27 - 169
Target Start/End: Original strand, 5673196 - 5673329
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||| || |||| ||||         |||||||||||||       
T  5673196 tgtgttgtggtttggtgagggacaaaaatatgagtttttgacttgtcccttgcctccagtttatcgtgtacctga---------acaaatcaaacatcaa 5673286  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaat 169  Q
    ||||||||||||||| | |  ||||||||||||||||||||||    
T  5673287 acaactagagttgttatgtcttgtccttcattttttagcaaat 5673329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 180
Target Start/End: Original strand, 17031191 - 17031367
Alignment:
Q  4 aacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaa 103  Q
    ||||||||||||||||       |||| |||| |||  |||||| ||||||| |  ||||||||||||||| ||||||| | ||||| ||||  ||||||    
T  17031191 aacttgtacgtgggacgaaaagttgtgctgtgatttaatgaggggcaaaaatttatgtttttgtcctgtcctttgcctccaatttgtactgtccctgaaa 17031290  T
Q  104 cagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||  |||| | |||||||  | |  |||||||||||||||| |  |||||| ||||||    
T  17031291 cagttttacaaatcaaacattatacaagtggagttgtgttgtcttgtccttcattttttaacggatcaaaagcaccc 17031367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 21739048 - 21739015
Alignment:
Q  148 tgtccttcattttttagcaaatcaaacgcaccca 181  Q
    ||||||||||||||||||||||||||||||||||    
T  21739048 tgtccttcattttttagcaaatcaaacgcaccca 21739015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 40182553 - 40182596
Alignment:
Q  135 agttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    ||||||||| | || |||||||||||||||||||||||||||||    
T  40182553 agttgttctgtcatttccttcattttttagcaaatcaaacgcac 40182596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 40182495 - 40182556
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtt 62  Q
    |||||||||||| ||||||       |||| |||||||||||||||||||||||||| ||||    
T  40182495 gacaacttgtacatgggacaaaaagttgtgatgtggtttggtgagggacaaaaatataagtt 40182556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 130; Significance: 2e-67; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 51259833 - 51259655
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       ||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  51259833 gacaacttgtacgtgggacaaaaagttgtgccgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctg 51259734  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacc 179  Q
    |||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  51259733 aaacagttttacaaatcaaacactggacaactagagttgttctgtcatgtccttcattttttagcaaatcaaacgcacc 51259655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 27 - 183
Target Start/End: Original strand, 20255102 - 20255258
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||| |||    
T  20255102 tgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactgg 20255201  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacccaaa 183  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  20255202 acaactagagttgttctgtcatgtccttcattttttagcaaatcaaacgcacccaaa 20255258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 2135128 - 2135281
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  2135128 tgtgctgtggtttggtgagggacaaaaatatgagtttttgttctgtcccttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaacactgg 2135227  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  2135228 acaactagagttgttctgtcctgtccttcattttttagcaaatcaaacgcaccc 2135281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 29584907 - 29585084
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||    
T  29584907 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcacttgcctccagtttgtcctgtacctg 29585006  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    |||||||||||||||||||||| |||||||||||||||||||| |  ||||||| |||||||||||||||||||||||    
T  29585007 aaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtcctttattttttagcaaatcaaacgcac 29585084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 40094561 - 40094714
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||| |||    
T  40094561 tgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgttctgtacctgaaacagttttacaaatcaaacactgg 40094660  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  40094661 acaactagagttgttctgtcctgtccttcattttttagcaaatcaaacgcaccc 40094714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 12349224 - 12349045
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  12349224 gacaacttgtacgtgggacataaagttgtgctgtggtttggtgagagacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctg 12349125  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| ||||||||| |||||||| | |  |||||||||||||||||||||||||||||||||    
T  12349124 aaacagttttacaaatcaaacactggacaactggagttgttatgtcctgtccttcattttttagcaaatcaaacgcaccc 12349045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 21221413 - 21221235
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||| |||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||    
T  21221413 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtt-gtcctgtacctg 21221315  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||| |||||||||||||||||||||| |  ||||||| |||||||||||||||||||||||||    
T  21221314 aaacagttttacaaatcaaatattggacaactagagttgttctgtcctgtcctttattttttagcaaatcaaacgcaccc 21221235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 25927380 - 25927201
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||    
T  25927380 gacaacttgtacgtgggacaaaaagttgtgttgtgttttggtaagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtatttg 25927281  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||||| |||||||||||||||||| |  ||||| |||||||||||||||||||||||||||    
T  25927280 aaacagttttacaaatcaaacattagacaactagagttgttctgtcctgtccatcattttttagcaaatcaaacgcaccc 25927201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 28675822 - 28676001
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||    
T  28675822 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctatcccttgcctccagtttgtcctgtacctg 28675921  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| |||||||||||| ||||||| |  ||| |||||||||||| ||||||||||||||||    
T  28675922 aaacagttttacaaatcaaacactggacaactagaattgttctgtcctgttcttcattttttaacaaatcaaacgcaccc 28676001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 1344760 - 1344587
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||| |||       |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||    
T  1344760 gacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttctgtcctgtcccttgcctccagtttgtcctgtacctg 1344661  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaac 174  Q
    ||| |||||||||||||||||| |||||||||||||||||||| |  |||||||||||||||||||||||||||    
T  1344660 aaatagttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaac 1344587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 24571313 - 24571486
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||| ||||||       |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||    
T  24571313 gacaacttgtacatgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcttgtacctg 24571412  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaac 174  Q
    |||||||||||||||||||||| |||||||||||||||||| | |  |||||||||||||||||||||||||||    
T  24571413 aaacagttttacaaatcaaacactggacaactagagttgttttgtcctgtccttcattttttagcaaatcaaac 24571486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 44116971 - 44117148
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       ||||  |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  44116971 gacaacttgtacgtgggacaaaaagttgtgcagtggtttgatgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctg 44117070  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    |||| ||||||||||||||||| |||||||||||||||||||| |   ||||||||||||||||||||||||||||||    
T  44117071 aaacggttttacaaatcaaacactggacaactagagttgttctgtccagtccttcattttttagcaaatcaaacgcac 44117148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 47958485 - 47958308
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||    
T  47958485 gacaacttgtacgtgggacaaaaagttgtgctgtagtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttttcctgtacctg 47958386  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||  ||||| || ||||||||||||||||||||||    
T  47958385 aaacaattttacaaatcaaacactggacaactagagttgttctatactgtccatcgttttttagcaaatcaaacgcac 47958308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 31883075 - 31882896
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||| ||||| |||||||||| |||||||||| |||| |||||||| ||||||||||||| |||    
T  31883075 gacaacttgtacgtgggacaaaaagttgtgctgtggtttgctgaggcacaaaaatatcagtttttgtcgtgtctcttgcctccagtttgtcctgtacctg 31882976  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| ||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||    
T  31882975 aaacagttttacaaatcaaacactggacaactggagttgttctgtcatgtccttcattttttagcaaatcaaacgcaccc 31882896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 42636456 - 42636277
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| || ||     
T  42636456 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgttctgtcccttgcctccagtttgtcctataccta 42636357  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| |||||||||||| ||||||| |  |||||||||||||||||||||||||| ||||||    
T  42636356 aaacagttttacaaatcaaacactggacaactagaattgttctgtcctgtccttcattttttagcaaatcaaatgcaccc 42636277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 20609701 - 20609544
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||    
T  20609701 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgccaccagtttgtcctgtacctg 20609602  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcatt 158  Q
    ||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||    
T  20609601 aaacagttttacaaatcaaacattggacaactagagttgttctgtcctgtccttcatt 20609544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 34026699 - 34026867
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| || |||    
T  34026699 gacaacttgtacgtgggacaaaaaattgtgttgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctatacctg 34026798  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaat 169  Q
    |||||||||||||||||||||| || |||| |||||||||||| |  ||||||||||||||||||||||    
T  34026799 aaacagttttacaaatcaaacactgaacaaatagagttgttctgtcctgtccttcattttttagcaaat 34026867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 39052891 - 39052715
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||  |||    
T  39052891 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagagacaaaaatatgagtttttgtcctgtccattgcctccagtttgtcctgtgcctg 39052792  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgca 177  Q
    |||||||||||||||||||||| | |||||||||||||||| | |  |||| |||||||||||||||||||||||||    
T  39052791 aaacagttttacaaatcaaacactagacaactagagttgttttgtcttgtctttcattttttagcaaatcaaacgca 39052715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 2 - 186
Target Start/End: Complemental strand, 49748963 - 49748779
Alignment:
Q  2 acaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctga 101  Q
    ||||||||||||||||||       ||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||| ||||||||||||| ||||    
T  49748963 acaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttgtcatgtcctttgcctccagtttgtcctgtacctga 49748864  T
Q  102 aacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacccaaattt 186  Q
    ||||||||||||||||||||| |  |||||| ||||||||||||  | ||||||||||| |||||||||||||||||||| ||||    
T  49748863 aacagttttacaaatcaaacactaaacaacttgagttgttctatcctatccttcattttctagcaaatcaaacgcacccatattt 49748779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 38213386 - 38213565
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       ||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||| || ||||||| || |||    
T  38213386 gacaacttgtacgtgggacaaaaagttgtgttgtggtttcgtgagtgacaaaaatatgagtttttgtcctgtctcttgcctccagattgtcctatacctg 38213485  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||  |||| ||||||||||||||||| ||||||||||    
T  38213486 aaacaattttacaaatcaaacactggacaactagagttgttctatcctgtctttcattttttagcaaataaaacgcaccc 38213565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 25860474 - 25860312
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||| |||       |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||    
T  25860474 gacaacttgtacgtgagacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtacctg 25860375  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcatttttta 163  Q
    |||||||||||||||||||||| |||||||||||||||||||| | | |||||||||||||||    
T  25860374 aaacagttttacaaatcaaacactggacaactagagttgttctgtcaagtccttcatttttta 25860312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 2 - 180
Target Start/End: Complemental strand, 51925260 - 51925082
Alignment:
Q  2 acaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctga 101  Q
    ||||||||||||||||||       ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||| |||| ||||    
T  51925260 acaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttgtcctgtcctttgcctccagtttgtcatgtacctga 51925161  T
Q  102 aacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||||||| ||||| ||||||||| |||||||||| |  | ||||||||||| |||||||||||||||||||    
T  51925160 aacagttttacaaattaaacactggacaactggagttgttctgtcctatccttcattttctagcaaatcaaacgcaccc 51925082  T

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Target: chr3; HSP #23
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 21373962 - 21374141
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||    
T  21373962 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagattttgtcctgtcccttgcctcaagtttgtcctgtacctg 21374061  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| | |||||||  ||||||| | | || | ||||||||||||||||| ||||| |||||    
T  21374062 aaacagttttacaaatcaaacactagacaactgaagttgttatgtcattttcttcattttttagcaaaccaaacacaccc 21374141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 3864728 - 3864545
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| |||| |||    
T  3864728 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggcgagggacaaaaatatgagtttttgtcctgtcctttgcctccagtttgtcttgtacctg 3864629  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacccaaattt 186  Q
    ||||||||||||||||||||||  ||||||||| ||||||||| |  ||||  |||||||||||||||| |||||||||| |||||    
T  3864628 aaacagttttacaaatcaaacaccggacaactaaagttgttctgtcctgtc--tcattttttagcaaatgaaacgcaccctaattt 3864545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 27 - 179
Target Start/End: Original strand, 51296639 - 51296789
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||| ||||| |||    
T  51296639 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcctttgcctccagtttgtcctgtacctgaaacagttttacaaattaaacactgg 51296738  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacc 179  Q
    |||| |||||||||||| || |||| ||   ||||||||||||||||||||||    
T  51296739 acaattagagttgttctgttctgtcttt--atttttagcaaatcaaacgcacc 51296789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 33 - 180
Target Start/End: Complemental strand, 53557816 - 53557669
Alignment:
Q  33 gtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaact 132  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||| || ||||||||||||||||||||||||| ||||||    
T  53557816 gtggtttggtgagggacaaaactatgagtttttgtcctgtccattgcctccagtttgtcctgtacctaaaacagttttacaaatcaaacattgaacaact 53557717  T
Q  133 agagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||| ||| | || ||||| |||||||||||||||||| ||||||    
T  53557716 agagttgctctgtcatatcctttattttttagcaaatcaaatgcaccc 53557669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 33364831 - 33364652
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||| |||       |||| ||||||||| |||||| ||||||||| ||||||||||||||| |||||||| ||||||||||||| |||    
T  33364831 gacaacttgtacgtgagacaaaaagttgtgatgtggtttgctgaggggcaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctg 33364732  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||| ||||| |||||||||  ||||||||| |  |||||||||||||||||||||||||||||||||    
T  33364731 aaacagttttacaaataaaacactggacaactgaagttgttctgtcttgtccttcattttttagcaaatcaaacgcaccc 33364652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 28 - 181
Target Start/End: Complemental strand, 41683079 - 41682926
Alignment:
Q  28 gtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgga 127  Q
    ||||||||||||| |||||||||||| ||| |||||||||| |||| |||||||| ||||||||||||| ||||||||||||||||||||||||| ||||    
T  41683079 gtgttgtggtttgctgagggacaaaagtatcagtttttgtcttgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactgga 41682980  T
Q  128 caactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccca 181  Q
    |||||  ||||||| | |  ||||||||||||||||||||||||||||||||||    
T  41682979 caactgaagttgttttgtcctgtccttcattttttagcaaatcaaacgcaccca 41682926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 50386509 - 50386329
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||| ||||       |||| ||||||||| ||||| |||||||||| | |||||||| |||| |||||||| ||||||||||||| |||    
T  50386509 gacaacttgtacgtaggacaaaaagttgtgctgtggtttgttgaggcacaaaaatatcaatttttgtcatgtctcttgcctccagtttgtcctgtacctg 50386410  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccca 181  Q
    |||||||||||||||||||||| | ||||||| |||||||||| |  ||||||||||||||||||||||||||||||||||    
T  50386409 aaacagttttacaaatcaaacactagacaactggagttgttctgtcctgtccttcattttttagcaaatcaaacgcaccca 50386329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 50678830 - 50679009
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||| |||       ||||||||||||||||||| ||||||||||| |||||||||||||| | ||||||| ||||||||||||| |||    
T  50678830 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagagacaaaaatatcagtttttgtcctgttctttgcctccagtttgtcctgtacctg 50678929  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||| ||||||||||| ||||||||| || ||||| | |  ||| |||||||||||||||||||||||||||||    
T  50678930 aaacagtttttcaaatcaaacactggacaacttgaattgttatgtcttgtacttcattttttagcaaatcaaacgcaccc 50679009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 4851509 - 4851338
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||| ||||||||||||||||||  ||||||||||||||||||||||||| |  ||||| |||| ||     
T  4851509 gacaacttgtacgtgggacaaaaagttgtgttgtgggttggtgagggacaaaaat--gagtttttgtcctgtcccttgcctccaaattgtcttgtaccta 4851412  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacc 179  Q
    |||||||||||||||||||||| |||||||||||||||||||     |||||||||||||||| |||||||||||||||    
T  4851411 aaacagttttacaaatcaaacactggacaactagagttgttc-----tgtccttcattttttaacaaatcaaacgcacc 4851338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 57 - 181
Target Start/End: Complemental strand, 3695304 - 3695180
Alignment:
Q  57 tgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttca 156  Q
    |||||||||||||||||||||||||| |||||||| |||| || |||||||||||||||||||||| |||||||||||||||||| | |  |||||||||    
T  3695304 tgagtttttgtcctgtcccttgcctccagtttgtcatgtacctaaaacagttttacaaatcaaacactggacaactagagttgttttgtcctgtccttca 3695205  T
Q  157 ttttttagcaaatcaaacgcaccca 181  Q
    |||||||||||||||||||||||||    
T  3695204 ttttttagcaaatcaaacgcaccca 3695180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 19906794 - 19906970
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||| |||       |||| |||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||| ||||  |||    
T  19906794 gacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtcctgtcccttgcctccagtttgttctgtccctg 19906893  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgca 177  Q
    ||||| |||||||||||||||| |||||||||  ||||||| |||  |||||||||||||||| |||||||| ||||    
T  19906894 aaacaattttacaaatcaaacactggacaactgaagttgttttatcctgtccttcattttttaacaaatcaatcgca 19906970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 27 - 179
Target Start/End: Original strand, 24721543 - 24721695
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||||||||||||| ||||| || ||||| | |||||||||||||||| || |||| ||||||| ||||  ||||||||||||||||||||||||| ||     
T  24721543 tgtgttgtggtttgttgaggtaccaaaattttagtttttgtcctgtcctttacctccagtttgttctgtccctgaaacagttttacaaatcaaacactga 24721642  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacc 179  Q
    ||||||||||||||||| | ||||||||||||||||| ||||| |||||||||    
T  24721643 acaactagagttgttctgtcatgtccttcattttttaacaaattaaacgcacc 24721695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 69 - 180
Target Start/End: Original strand, 5442379 - 5442490
Alignment:
Q  69 ctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaa 168  Q
    |||||||||||||| |||||||| |||| ||||||||| ||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||    
T  5442379 ctgtcccttgcctccagtttgtcttgtacctgaaacagctttacaaatcaaacactggacaactagagttgttctgtcatgtccttcattttttagcaaa 5442478  T
Q  169 tcaaacgcaccc 180  Q
    ||||||||||||    
T  5442479 tcaaacgcaccc 5442490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 54622849 - 54622678
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||||||        ||||||||||||| ||||| ||||||||||||||||||||||||||||||||| | |||||||| | ||| |||    
T  54622849 gacaacttgtacgtgggataaaaagttgtgttgtggtttcgtgagcgacaaaaatatgagtttttgtcctgtcccttgcatttagtttgt-cagtacctg 54622751  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaa 173  Q
    |||||||||||||||||||| |  ||||||||  ||||||| | | |||||||||||||||||||||||||||    
T  54622750 aaacagttttacaaatcaaataccggacaactgaagttgttttgtcatgtccttcattttttagcaaatcaaa 54622678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 181
Target Start/End: Original strand, 29646099 - 29646278
Alignment:
Q  2 acaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctga 101  Q
    ||||||||||||||||||       |||| ||||||||||||||||||||||||||  ||||||||||| ||||||||||| ||||| || |||| || |    
T  29646099 acaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatatgtttttgtcctatcccttgcctccagtttatcgtgtacctaa 29646198  T
Q  102 aacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccca 181  Q
    ||||||||||||||||||||| || |||||| || ||||| | |  ||||||||||||||||| |||||||| |||||||    
T  29646199 aacagttttacaaatcaaacactgaacaactggaattgttttgtcttgtccttcattttttagaaaatcaaatgcaccca 29646278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 30 - 180
Target Start/End: Complemental strand, 45690930 - 45690780
Alignment:
Q  30 gttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggaca 129  Q
    |||||| | |||||||||| |||||||| |||||||||||||||| ||||||| | ||| ||||||| ||||||||||||| ||||||||||| ||||||    
T  45690930 gttgtgctgtggtgagggagaaaaatatcagtttttgtcctgtcctttgcctccaatttatcctgtacctgaaacagttttgcaaatcaaacactggaca 45690831  T
Q  130 actagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||  |||||||||||  ||||||||| ||| |||||||||||||||||||    
T  45690830 actgaagttgttctatcctgtccttcactttatagcaaatcaaacgcaccc 45690780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 3867676 - 3867523
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| |||||||||||||||||||||||| | || ||||||| |||| |||| ||| ||| ||| ||||  |||||||||||||||||||||||||  ||    
T  3867676 tgtgctgtggtttggtgagggacaaaaatttcaggttttgtcatgtctcttgtctccagtatgttctgtccctgaaacagttttacaaatcaaacaccgg 3867577  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||| |||||||||| |  |||||||||||||||| ||||||||||||||||    
T  3867576 acaactggagttgttctgtcttgtccttcattttttaacaaatcaaacgcaccc 3867523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 3964320 - 3964496
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||| ||||||       |||| |||||||||||||||||||||||| | ||||||||||| || ||||||||| | |||||| |||   ||    
T  3964320 gacaacttgtacatgggacaaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtccagttccttgcctccaatttgtcatgtccatg 3964419  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgca 177  Q
    |||||||||||||||||||||| |||||||||  ||||||||| |  | |||||||||||||| |||||||||||||    
T  3964420 aaacagttttacaaatcaaacactggacaactgaagttgttctgtcctatccttcattttttatcaaatcaaacgca 3964496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 6179483 - 6179637
Alignment:
Q  27 tgtgttgtggtttggtgaggg-acaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattg 125  Q
    |||| |||||||||| ||||| ||||||||   ||||||||||||||||||| |||| |||||| |||||  ||||||| ||||||||||||||||| ||    
T  6179483 tgtgctgtggtttggcgaggggacaaaaattacagtttttgtcctgtcccttacctccagtttgacctgtttctgaaactgttttacaaatcaaacactg 6179582  T
Q  126 gacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||| |||||||| |||  ||||||||||||||||  |||||||||||||||    
T  6179583 gacaactggagttgttttatcctgtccttcattttttataaaatcaaacgcaccc 6179637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 84 - 180
Target Start/End: Original strand, 43175590 - 43175686
Alignment:
Q  84 agtttgtcctgtagctgaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||| || |||||| |||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  43175590 agtttgtcctatacctgaaatagttttacaaatcaaacactggacaactagagttgttctgttctgtccttcattttttagcaaatcaaacgcaccc 43175686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 22484796 - 22484617
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||| ||||||||||       |||||||| ||||||  ||| ||||||||   || ||||||| ||||||||||||| |||||||| |||  |||    
T  22484796 gacaacttatacgtgggacaaaaagttgtgttgtagtttggcaaggaacaaaaattgtagcttttgtcatgtcccttgcctccagtttgtcatgtccctg 22484697  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||| |||||||||||||| || ||||||| | |||||||||| |  |||||||||||||||| ||||||||||||||||    
T  22484696 aaactgttttacaaatcaatcactggacaattggagttgttctgtcctgtccttcattttttatcaaatcaaacgcaccc 22484617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 30 - 163
Target Start/End: Original strand, 52300497 - 52300633
Alignment:
Q  30 gttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggaca 129  Q
    ||||||||||||||| |||||||||| | ||||||||||||||||||| |||  ||||||||| ||  ||||||||||||||  ||||||||||||||||    
T  52300497 gttgtggtttggtgatggacaaaaatttcagtttttgtcctgtcccttacctgcagtttgtcccgtctctgaaacagttttatgaatcaaacattggaca 52300596  T
Q  130 actag---agttgttctattatgtccttcatttttta 163  Q
    || |    ||||||||| | |||||||||||||||||    
T  52300597 acaaccgaagttgttctgtcatgtccttcatttttta 52300633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 175
Target Start/End: Original strand, 10747263 - 10747406
Alignment:
Q  32 tgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaac 131  Q
    ||||||||| ||| | |||||||||| |||||||||||| || |||| ||| ||||||||||||| || ||| |||||||||||||||||| || |||||    
T  10747263 tgtggtttgctgacgaacaaaaatatcagtttttgtcctatctcttgtctccagtttgtcctgtacctaaaatagttttacaaatcaaacactgaacaac 10747362  T
Q  132 tagagttgttctattatgtccttcattttttagcaaatcaaacg 175  Q
    |  | ||||| | |  |||||||||||||||| |||||||||||    
T  10747363 tgaaattgttttgtcctgtccttcattttttaacaaatcaaacg 10747406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 53046668 - 53046605
Alignment:
Q  57 tgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaa 120  Q
    ||||||||||||||||||||| |||| |||||||||| || |||||||||||||||||||||||    
T  53046668 tgagtttttgtcctgtcccttacctccagtttgtcctatacctgaaacagttttacaaatcaaa 53046605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 34351395 - 34351298
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacatt 124  Q
    |||||||||||||| |||||||||| ||| |  ||||||||| ||||  || ||||||||||||| |||  |||||||||||||||||||||| ||||    
T  34351395 tgtgttgtggtttgatgagggacaataatttttgtttttgtcgtgtctatttcctctagtttgtcatgtccctgaaacagttttacaaatcaatcatt 34351298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 26282440 - 26282316
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||| ||||||||||       |||| ||||||||| |||| ||||||||||| ||||||||||| ||| ||| |||| |||||||| |||| ||     
T  26282440 gacaacttatacgtgggacaaaaagttgtgctgtggtttgatgagagacaaaaatataagtttttgtcccgtctcttacctccagtttgtcttgtacctt 26282341  T
Q  101 a---aacagttttacaaatcaaaca 122  Q
    |   || ||||||||||||||||||    
T  26282340 aaataatagttttacaaatcaaaca 26282316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 140
Target Start/End: Original strand, 30258934 - 30259043
Alignment:
Q  31 ttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaa 130  Q
    ||||||||| ||| || ||| |||| | |||||||||| || || ||||||| ||||| ||||||   ||||||| ||||||||||||||||||| | ||    
T  30258934 ttgtggtttagtggggtacacaaatttcagtttttgtcttgcccattgcctcgagtttatcctgtctttgaaacaattttacaaatcaaacattgtataa 30259033  T
Q  131 ctagagttgt 140  Q
    |||| |||||    
T  30259034 ctagggttgt 30259043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 174
Target Start/End: Original strand, 44267868 - 44267941
Alignment:
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaac 174  Q
    |||| |||||||||||||||||| | ||||||  |||||||| || ||||||||||||||||| ||||| ||||    
T  44267868 aaactgttttacaaatcaaacatcgaacaactgaagttgttcgatcatgtccttcattttttatcaaataaaac 44267941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 49928938 - 49928995
Alignment:
Q  239 ttggtttgtgatggacttcgtttgaaagaagagcatgggttgatgagtggtgaagtgc 296  Q
    |||||||||||||||||||||||||||| |||  ||| |||| |||||||||||||||    
T  49928938 ttggtttgtgatggacttcgtttgaaaggagaagatgagttgctgagtggtgaagtgc 49928995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 132
Target Start/End: Complemental strand, 39215473 - 39215391
Alignment:
Q  50 aaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaact 132  Q
    |||||| | |||||||||| |||||||| ||||  |||||||||||   |||||||||||||||||||||  |||| ||||||    
T  39215473 aaaaatttcagtttttgtcttgtcccttacctccggtttgtcctgttcttgaaacagttttacaaatcaagtattgaacaact 39215391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 8253763 - 8253884
Alignment:
Q  59 agtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcatt 158  Q
    ||||||| || ||| ||||| ||| |||||||| |||   |||||||  |||||||||| ||||||  ||||||||||||||  | |  | |||||||||    
T  8253763 agtttttatcatgttccttgactccagtttgtcttgtccttgaaacaactttacaaatcgaacattatacaactagagttgtcttgtcttatccttcatt 8253862  T
Q  159 ttttagcaaatcaaacgcaccc 180  Q
    |||||| | |||||||||||||    
T  8253863 ttttagtagatcaaacgcaccc 8253884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 174
Target Start/End: Original strand, 26847417 - 26847532
Alignment:
Q  59 agtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcatt 158  Q
    ||||||||||||||| |||||||| | |||||  | |  || |||||||||||||||| ||||| |  |||| | |||||||  | | || | |||||||    
T  26847417 agtttttgtcctgtctcttgcctccaatttgttatatcacttaaacagttttacaaattaaacactatacaagtggagttgtcatgtcatatgcttcatt 26847516  T
Q  159 ttttagcaaatcaaac 174  Q
    ||||||||||||||||    
T  26847517 ttttagcaaatcaaac 26847532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 17264624 - 17264563
Alignment:
Q  102 aacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcatttttta 163  Q
    ||||||||||||||||||| |||| |||| || |||||   |||| ||||||||||||||||    
T  17264624 aacagttttacaaatcaaatattgtacaattaaagttgccatattttgtccttcatttttta 17264563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 25954518 - 25954554
Alignment:
Q  37 tttggtgagggacaaaaatatgagtttttgtcctgtc 73  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  25954518 tttggtgagagacaaaaatatgagtttttgtcgtgtc 25954554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 53046560 - 53046524
Alignment:
Q  57 tgagtttttgtcctgtcccttgcctctagtttgtcct 93  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  53046560 tgagtttttgtcctgtcccttacctccagtttgtcct 53046524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 4e-66; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 9732989 - 9732809
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||    
T  9732989 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcctgtacctg 9732890  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccca 181  Q
    |||||||||||||||||||||| |||||||||||||||||||| |  |||||||||||||||| |||||||||||||||||    
T  9732889 aaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttaacaaatcaaacgcaccca 9732809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 7761632 - 7761453
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||| |||       |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  7761632 gacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcatgtacctg 7761533  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| |||||||||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  7761532 aaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaacgcaccc 7761453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 35114816 - 35114988
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  35114816 gacaacttgtacgtgggacaaaaaattgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctg 35114915  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaa 173  Q
    |||||||||||||||||||||| | ||||||||||||||| || |  ||||||||||||||||||||||||||    
T  35114916 aaacagttttacaaatcaaacactagacaactagagttgtcctgtcttgtccttcattttttagcaaatcaaa 35114988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 34338841 - 34339020
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||| ||||||||       |||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  34338841 gacaacttgtgcgtgggacaaaaagttgtgctgtggtttggtgagggtcaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctg 34338940  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| |||||||||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  34338941 aaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaacgcaccc 34339020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 37308686 - 37308864
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||| |||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  37308686 gacaatttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctg 37308785  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttca-ttttttagcaaatcaaacgcac 178  Q
    |||||||||||||||||||||| |||||||||||||||||||| |  ||||||||| ||||||||||||||||||||||    
T  37308786 aaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcatttttttagcaaatcaaacgcac 37308864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 2645145 - 2644968
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||| |||||||       |||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||| |||    
T  2645145 gacaacttgtatgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctctcc-ttgcctccagtttgtcctgtacctg 2645047  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacc 179  Q
    |||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  2645046 aaacagttttacaaatcaaacactggacaactagagttgttctatcctgtccttcattttttagcaaatcaaacgcacc 2644968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 18685867 - 18686045
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| |||||||||||||| |||||||||||||||||||||| ||||| ||||||| ||||||||||||| |||    
T  18685867 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagagacaaaaatatgagtttttgtcttgtcctttgcctccagtttgtcctgtacctg 18685966  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacc 179  Q
    |||||||||||||||||||||| ||||||||||||||| |||| | |||||||||||||||||||||||||||||||||    
T  18685967 aaacagttttacaaatcaaacactggacaactagagttattctgtcatgtccttcattttttagcaaatcaaacgcacc 18686045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 7258928 - 7259104
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||| |||       |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  7258928 gacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctg 7259027  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgca 177  Q
    |||||||||||||||||||||| | |||| ||||||||||||| | ||||||||||||||||| |||||||||||||    
T  7259028 aaacagttttacaaatcaaacactagacagctagagttgttctgtcatgtccttcattttttaacaaatcaaacgca 7259104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 33889274 - 33889453
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  33889274 gacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggaaaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtatctg 33889373  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||| |||||||||||||||| | |||||||||||||||||| |  ||||||||||||||||| |||||||||||||||    
T  33889374 aaacaattttacaaatcaaacactagacaactagagttgttctgtcctgtccttcattttttagtaaatcaaacgcaccc 33889453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 32766537 - 32766384
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||| |||    
T  32766537 tgtgttgtggtttggtgagggacaaaaatatcagtttttgtcctgtcccttgcctccagtttgtcatgtacctgaaacagttttacaaatcaaacactgg 32766438  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||| || ||||||||| || |||||||| ||||||||||||||||||||||||    
T  32766437 acaattatagttgttctgttctgtccttcgttttttagcaaatcaaacgcaccc 32766384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 33366667 - 33366820
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||    
T  33366667 tgtgttgtggtttggtgaggaacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactgg 33366766  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||| |||| ||||||| | || ||||||||||||||||||||||||| |||||    
T  33366767 acaattagaattgttctgtcatatccttcattttttagcaaatcaaacacaccc 33366820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 32497946 - 32498123
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| |||| |||    
T  32497946 gacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgaggtacaaaaatatgagtttttgtcctgtcccttgccttcagtttgtcatgtacctg 32498045  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    |||||||||||||||||||||| ||||||||||||||||||||   ||| ||||||||||||||||||||||||||||    
T  32498046 aaacagttttacaaatcaaacactggacaactagagttgttctgccatgcccttcattttttagcaaatcaaacgcac 32498123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 17540746 - 17540924
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||    
T  17540746 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacttg 17540845  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacc 179  Q
    |||||||||||||||||||||| |||||||||| | ||||||| | || || ||||||||||| |||||||||||||||    
T  17540846 aaacagttttacaaatcaaacactggacaactaaaattgttctgtcatatctttcattttttaacaaatcaaacgcacc 17540924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 19513748 - 19513571
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||| |||    
T  19513748 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcctttgcctcccgtttgtcctgtacctg 19513649  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcatt-ttttagcaaatcaaacgca 177  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |  ||||||||||| ||||||||||| |||||||    
T  19513648 aaacagttttacaaatcaaacattggaaaactagagttgttctgtcctgtccttcatttttttagcaaatgaaacgca 19513571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 27 - 182
Target Start/End: Complemental strand, 28824590 - 28824435
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||| ||| ||| ||| ||||| ||||||||||||||||||||||||| |||    
T  28824590 tgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgacccttgactccagtatgtgctgtacctgaaacagttttacaaatcaaacactgg 28824491  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacccaa 182  Q
    ||||||  ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  28824490 acaactgaagttgttctgtcatgtccttcattttttagcaaatcaaacgcacccaa 28824435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 27 - 183
Target Start/End: Complemental strand, 10399903 - 10399747
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||  ||||| |||||||||||||||| |||||| |||||||||||||||||| ||     
T  10399903 tgtgttgtggtttagtgaaggacaaaaatatgagtttttgtcctgtatcttgcatctagtttgtcctgtacctgaaatagttttacaaatcaaacactga 10399804  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacccaaa 183  Q
    ||||||  ||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  10399803 acaactgaagttgttctatcatgtccttcattttttagcaaatcaaacacacccaaa 10399747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 40692328 - 40692509
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||  ||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||| |||| ||     
T  40692328 gacaacttgtacgtgggacaaaaagttgttctgtggtttggtgagggacaaaaatacgagtttttgtcctgtcccttgtctccagtttgtcttgtaccta 40692427  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacccaa 182  Q
    ||||||||| |||||| ||||| |||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||    
T  40692428 aaacagtttcacaaattaaacactggacaactagagttgttctgtcttgtccttcattttttagcaaatcaaacgcacccaa 40692509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 44284660 - 44284836
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||| |||       |||| |||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||| |||| |||    
T  44284660 gacaacttgtacgtgagacaaaaagttgtgctgtggtttagtgagggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcttgtacctg 44284759  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgca 177  Q
    |||||||||||||||||||||| || ||||||  ||||||||| | |||||||||||||||||||||||||||||||    
T  44284760 aaacagttttacaaatcaaacactgaacaactctagttgttctgtcatgtccttcattttttagcaaatcaaacgca 44284836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 27 - 179
Target Start/End: Complemental strand, 30798522 - 30798370
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgt-cctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattg 125  Q
    |||| |||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||| |||| ||||||||||||||||||||||||| ||    
T  30798522 tgtgatgtggtttggtgagggacaaaaatatgagttttttttcctgtcccttgcctccagtttgtcatgtacctgaaacagttttacaaatcaaacactg 30798423  T
Q  126 gacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacc 179  Q
    ||||||||||||||||||  | || |||||||||||||||||||||||||||||    
T  30798422 gacaactagagttgttct-gtctgcccttcattttttagcaaatcaaacgcacc 30798370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 42365634 - 42365787
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| |||||||| |||| ||||||| ||||||||||||||||| | |    
T  42365634 tgtgttgtggtttgatgaaggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcatgtacctgaaacggttttacaaatcaaacactag 42365733  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||||||| | | |||||||||||||||||||||||||||| |||||    
T  42365734 acaactagagttgttatgtcatgtccttcattttttagcaaatcaaacacaccc 42365787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 30326390 - 30326214
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||| |||       |||| |||||||||| ||| ||||||| ||||||||||||||||||||| |||||| ||||||||||||| |||    
T  30326390 gacaacttgtacgtgagacaaaaagttgtgctgtggtttggcgagagacaaaa-tatgagtttttgtcctgtcccctgcctccagtttgtcctgtacctg 30326292  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    |||||||||||||||||||||| |||||||||||||||| ||| |  |||||||||||||||||||||||||||||||    
T  30326291 aaacagttttacaaatcaaacactggacaactagagttgctctgtcctgtccttcattttttagcaaatcaaacgcac 30326214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 5278893 - 5278720
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||    
T  5278893 gacaacttgtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcatgtacctg 5278794  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacg 175  Q
    ||||||||||||||||||||||    |||| |||||||||||| | || ||||| ||||||||||||||||||||    
T  5278793 aaacagttttacaaatcaaacacctaacaattagagttgttctgtcatatcctt-attttttagcaaatcaaacg 5278720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 3913519 - 3913343
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||| ||       |||||||||||||||||||||||||| || ||||||||||||||||  |||||||| |||||||| | || |||    
T  3913519 gacaacttgtacgtggaacaaaaagttgtgttgtggtttggtgagggacaaacatgtgagtttttgtcctgtttcttgcctccagtttgtcatatacctg 3913420  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgca 177  Q
    |||||||||||||||||||||| |||||||||||| ||||| | | |||||||| ||||||||||||||||||||||    
T  3913419 aaacagttttacaaatcaaacactggacaactagaattgttttgtcatgtcctttattttttagcaaatcaaacgca 3913343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 42706390 - 42706549
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||| |||||||       |||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||| |||    
T  42706390 gacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcttatcccttgcctccagtttgtcctgtacctg 42706489  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcatttt 160  Q
    |||||||||||||||||||||| |||||||||||| ||||||| |  ||||||| |||||    
T  42706490 aaacagttttacaaatcaaacactggacaactagaattgttctgtcctgtcctttatttt 42706549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 11114903 - 11115080
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||| ||||||||       |||| ||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||| |||    
T  11114903 gacaacttgtgcgtgggacaaaaagttgtgatgtggtttggtgaggaacaaaaatatgattttttgtcctgtcccttgcctccagtttgtcctgtaactg 11115002  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
     ||||| ||||||||||||||||||||||| | |||||||| | |  ||||||||||||||||||||||||||| |||||    
T  11115003 -aacag-tttacaaatcaaacattggacaattggagttgttttgtcctgtccttcattttttagcaaatcaaacacaccc 11115080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 27 - 165
Target Start/End: Complemental strand, 12672507 - 12672373
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||| || |||||||||||||||||||||||||  ||    
T  12672507 tgtgttgtggtttggtgagggacaaaaatatgagattttgtcccgtcccttgcctccagtttgtcctatacctgaaacagttttacaaatcaaacacagg 12672408  T
Q  127 acaactagagttgttctattatgtccttcattttttagc 165  Q
    ||||||||||||| |||    ||||||||||||||||||    
T  12672407 acaactagagttgctct----tgtccttcattttttagc 12672373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 27 - 143
Target Start/End: Original strand, 16104331 - 16104447
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||| ||||||||||||||||||||||||| |||    
T  16104331 tgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgtcgtgtatctgaaacagttttacaaatcaaacactgg 16104430  T
Q  127 acaactagagttgttct 143  Q
    ||||||| |||||||||    
T  16104431 acaactatagttgttct 16104447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 38993130 - 38992953
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       ||||||||||||||  |||| ||||||||   |||||||||||||||||||||||| |||||||||| |  |||    
T  38993130 gacaacttgtacgtgggacaaaaagttgtgttgtggtttgacgaggaacaaaaattgtagtttttgtcctgtcccttgcctccagtttgtcctcttcctg 38993031  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    |||| ||||||||||||||||| ||||||||| ||||| |||| | ||||||||||||||||| ||||||||||||||    
T  38993030 aaactgttttacaaatcaaacactggacaactggagttattctgtcatgtccttcattttttatcaaatcaaacgcac 38992953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 6896199 - 6896379
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||| |||||||||||||||||||| | ||||||| |||||||||||||||| |||||||  |||  |||    
T  6896199 gacaacttgtacgtgggacaaaaagttgtgctgttgtttggtgagggacaaaaatttcagtttttatcctgtcccttgcctccagtttgttttgtccctg 6896298  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccca 181  Q
    |||||||||||||||||||||| |||||||||  ||||||||| |  |||| ||||||||||| |||||||||||||||||    
T  6896299 aaacagttttacaaatcaaacactggacaactgaagttgttctgtcctgtctttcattttttaacaaatcaaacgcaccca 6896379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 29 - 174
Target Start/End: Original strand, 39461376 - 39461518
Alignment:
Q  29 tgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggac 128  Q
    ||||||| |||||||||||||||||| |    ||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||| |||||    
T  39461376 tgttgtgatttggtgagggacaaaaacaa---tttttgtcctgtcacttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggac 39461472  T
Q  129 aactagagttgttctattatgtccttcattttttagcaaatcaaac 174  Q
    ||||| | |||||||||  |||||||||||||||||||||||||||    
T  39461473 aactaaaattgttctatcctgtccttcattttttagcaaatcaaac 39461518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 16177942 - 16177763
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||| |||       |||||||||||||||| || ||||||||||| ||||| |||||||||| ||||||| ||||| |||||||  ||    
T  16177942 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtaagcgacaaaaatatcagtttatgtcctgtccattgcctccagtttatcctgtacttg 16177843  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| ||||||| | |||||||| | | || ||||||||||||||||||||||||| |||||    
T  16177842 aaacagttttacaaatcaaacactggacaattggagttgttatgtcatatccttcattttttagcaaatcaaacacaccc 16177763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 29 - 163
Target Start/End: Complemental strand, 26981740 - 26981606
Alignment:
Q  29 tgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggac 128  Q
    |||||||||||||||||||||||||||||||||||||||| ||||  |||||||  ||||||| |||| ||| ||||||||||||||||||||| |||||    
T  26981740 tgttgtggtttggtgagggacaaaaatatgagtttttgtcatgtcatttgcctcccgtttgtcttgtatctggaacagttttacaaatcaaacactggac 26981641  T
Q  129 aactagagttgttctattatgtccttcatttttta 163  Q
    |||| |||||||||| || ||||||||||||||||    
T  26981640 aactggagttgttctgttctgtccttcatttttta 26981606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 27 - 181
Target Start/End: Complemental strand, 40832502 - 40832348
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||| |||| |||||| || ||||||||||||||| |||    
T  40832502 tgtgttgtggtttggtgagggacaaaaatatccgtttttgtcctgtcccttgcctccagtttgtcttgtacctgaaatagctttacaaatcaaacactgg 40832403  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccca 181  Q
    ||||||  ||||||| | | |||| |||| ||||||||||||| ||| |||||||    
T  40832402 acaacttaagttgttatgtcatgtgcttccttttttagcaaattaaaagcaccca 40832348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 38623363 - 38623184
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||| |||||||       |||| |||||||||||||||||||||||| | |||||||||| | ||| ||||||| ||||||||||||  |||    
T  38623363 gacaacttgtatgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtcttttccattgcctcaagtttgtcctgtccctg 38623264  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||||||||||||||||||| ||||  ||||||| | | |||||||||| |||||| |||||||||| |||||    
T  38623263 aaacagttttacaaatcaaacattggataactgaagttgttatgtcatgtccttcaatttttaacaaatcaaacacaccc 38623184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 77 - 180
Target Start/End: Complemental strand, 37863349 - 37863246
Alignment:
Q  77 tgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgc 176  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||| |||    
T  37863349 tgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgttctgtcatgtccttcattttttagcaaatcaagcgc 37863250  T
Q  177 accc 180  Q
    ||||    
T  37863249 accc 37863246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 27 - 178
Target Start/End: Complemental strand, 41366143 - 41365992
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    ||||||||||||||||||||||||||||| | |||||||||||| || |||||||| |||||||| |||  ||||||| |||| |||||||||||||||     
T  41366143 tgtgttgtggtttggtgagggacaaaaatttcagtttttgtcctatctcttgcctccagtttgtcatgtccctgaaactgtttcacaaatcaaacattgc 41366044  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    |||| | ||||||||||||  |||  |||| |||||||||||||||||||||    
T  41366043 acaattggagttgttctatcttgtttttcagtttttagcaaatcaaacgcac 41365992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 51 - 183
Target Start/End: Complemental strand, 18793300 - 18793170
Alignment:
Q  51 aaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaactagagttgttctattatgt 150  Q
    |||||||||||||||||| |||||||||||||   ||||| ||||| ||||||||||||||||||||||||| ||  |||||||||||||||| | ||||    
T  18793300 aaaatatgagtttttgtcatgtcccttgcctcc--tttgtactgtacctgaaacagttttacaaatcaaacactgagcaactagagttgttctgtcatgt 18793203  T
Q  151 ccttcattttttagcaaatcaaacgcacccaaa 183  Q
    ||||||||||||||||||||||| ||| |||||    
T  18793202 ccttcattttttagcaaatcaaatgcatccaaa 18793170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 37 - 177
Target Start/End: Original strand, 30712927 - 30713067
Alignment:
Q  37 tttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaactagag 136  Q
    ||||||||||||||||||| | ||||| |||||||||||||||||| || |||| ||||  |||||||||| |||||||||||||| |||| |||| |||    
T  30712927 tttggtgagggacaaaaatttcagtttgtgtcctgtcccttgcctccaggttgttctgtccctgaaacagtattacaaatcaaacactggataactggag 30713026  T
Q  137 ttgttctattatgtccttcattttttagcaaatcaaacgca 177  Q
    ||||| | | ||||| ||||||||||| |||||||||||||    
T  30713027 ttgttttgtcatgtctttcattttttaacaaatcaaacgca 30713067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 32 - 178
Target Start/End: Original strand, 2086134 - 2086270
Alignment:
Q  32 tgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaac 131  Q
    ||||||||||  ||||||||||||||||||||||||         |||||| |||||||| |||| ||||||||||||||||||||||||| ||||||||    
T  2086134 tgtggtttgggtagggacaaaaatatgagtttttgt---------tgcctccagtttgtcttgtacctgaaacagttttacaaatcaaacactggacaac 2086224  T
Q  132 tagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    |||||||| ||| |  |||||||||||||||||||||||||||||||    
T  2086225 tagagttg-tctgtcttgtccttcattttttagcaaatcaaacgcac 2086270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 86 - 180
Target Start/End: Original strand, 9717317 - 9717411
Alignment:
Q  86 tttgtcctgtagctgaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  9717317 tttgtcctgtacctgaaacagttttacaaatcaaacactgaacaactagagttgttctgtcctgtccttcattttttagcaaatcaaacgcaccc 9717411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 8112357 - 8112511
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaaca-ttg 125  Q
    ||||||||||||||||||| |||||||||||||||||||||  |||| |||||||| ||||||| ||||| |||||||| ||||||||||||||||  |     
T  8112357 tgtgttgtggtttggtgagagacaaaaatatgagtttttgtattgtctcttgcctccagtttgttctgtacctgaaacaattttacaaatcaaacacctt 8112456  T
Q  126 gacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||| ||  | | |||| ||| || |||||| ||||||||| |||||    
T  8112457 gacaactagagtagtattgtcatgttctttatcttttagtaaatcaaacacaccc 8112511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 27 - 177
Target Start/End: Complemental strand, 27462835 - 27462685
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    ||||||||||||||||||||||||||||||  || ||||||| ||||||||| ||  |||||||| |||| || |||||||||||||||||||||| |||    
T  27462835 tgtgttgtggtttggtgagggacaaaaataacagcttttgtcttgtcccttgtctacagtttgtcatgtacctaaaacagttttacaaatcaaacactgg 27462736  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgca 177  Q
    ||||||  | ||||| |||  |||| ||||| |||||  ||||||||||||    
T  27462735 acaactgaaattgttatatcctgtctttcatcttttaaaaaatcaaacgca 27462685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 162
Target Start/End: Original strand, 4641573 - 4641706
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| |||||||||||||| ||||||||||||| ||||||| | |||||   |||| |||||||| |||| ||||||||||||||||||||||||| ||     
T  4641573 tgtgctgtggtttggtgagagacaaaaatatgaatttttgttccgtccca--cctccagtttgtcttgtacctgaaacagttttacaaatcaaacactga 4641670  T
Q  127 acaactagagttgttctattatgtccttcatttttt 162  Q
    ||||||| ||||||||| |  | |||||||||||||    
T  4641671 acaactaaagttgttctgtcttttccttcatttttt 4641706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 181
Target Start/End: Original strand, 13829495 - 13829637
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| |||||| | |||| |||||||||| | ||||||||||||||||||| |||| ||||||||||||            || |||||||||||| |||    
T  13829495 tgtgatgtggtctagtgatggacaaaaatttcagtttttgtcctgtcccttacctccagtttgtcctgt------------ttcacaaatcaaacactgg 13829582  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccca 181  Q
    ||||||||||||||||| |  |||||||||||||||| |||||||||||||||||    
T  13829583 acaactagagttgttctgtcctgtccttcattttttaacaaatcaaacgcaccca 13829637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 93 - 180
Target Start/End: Complemental strand, 37003858 - 37003771
Alignment:
Q  93 tgtagctgaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||| ||||||||| ||||||||||||||| ||||||||| |||||||| | |  |||||||||||||||||||||||||||||||||    
T  37003858 tgtacctgaaacagatttacaaatcaaacactggacaacttgagttgttatgtcctgtccttcattttttagcaaatcaaacgcaccc 37003771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 26418954 - 26419035
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctc 82  Q
    |||||||||||||||||||       |||| ||||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  26418954 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgaggaacaaaaatatgagtttttgtcatgtccctcgcctc 26419035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 9717255 - 9717326
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgt 72  Q
    |||||||||||||||||||       |||| ||||||||||||||||||||||| |||||||||||||||||    
T  9717255 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaacatgagtttttgtcctgt 9717326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 37003927 - 37003861
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgt 67  Q
    ||||| |||||||||||||       |||||||||||||||||||||||||||||||||||||||||    
T  37003927 gacaatttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgt 37003861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 1247178 - 1247250
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtc 73  Q
    |||||||||||||||||||       ||||  |||||||||||||||||||||||||||| ||||||||||||    
T  1247178 gacaacttgtacgtgggacaaaaagttgtgcagtggtttggtgagggacaaaaatatgagattttgtcctgtc 1247250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 12939333 - 12939278
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctc 82  Q
    |||| ||||||||||||| |||||||||||| |||||||||| |||||||||||||    
T  12939333 tgtgctgtggtttggtgaaggacaaaaatatcagtttttgtcatgtcccttgcctc 12939278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 120
Target Start/End: Complemental strand, 15303254 - 15303180
Alignment:
Q  46 ggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaa 120  Q
    |||||||||| |  ||||||||| |||  |||||||||||||||||||||  ||||| |||||||||||||||||    
T  15303254 ggacaaaaatttatgtttttgtcatgtgtcttgcctctagtttgtcctgtctctgaagcagttttacaaatcaaa 15303180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 180
Target Start/End: Complemental strand, 45463107 - 45463002
Alignment:
Q  76 ttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattt-tttagcaaatcaaac 174  Q
    |||||||  ||||||| |||| ||||| |||||||||||||||||  ||| |||||| |||||||| | | || || ||||||| |||| ||||||||||    
T  45463107 ttgcctcctgtttgtcttgtacctgaagcagttttacaaatcaaatgttgaacaactggagttgttatgtcatctctttcatttgtttaacaaatcaaac 45463008  T
Q  175 gcaccc 180  Q
    ||||||    
T  45463007 gcaccc 45463002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 12939274 - 12939202
Alignment:
Q  104 cagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgc 176  Q
    |||||||| |||||||||| |||||||||  ||||||||| |  | ||||||||||||||| |||||||||||    
T  12939274 cagttttataaatcaaacactggacaactgaagttgttctgtcttatccttcattttttagtaaatcaaacgc 12939202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 130356 - 130418
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgt 90  Q
    ||||||||||||||||||||||||||||| | || |||||| ||||||||  ||||||||||||    
T  130356 tgtgttgtggtttggtgagggacaaaaatttaag-ttttgttctgtccctaacctctagtttgt 130418  T

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Target: chr2; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 170
Target Start/End: Complemental strand, 40876657 - 40876514
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||||||||||||  |||  || |||||| |||| ||||||| |||||||| ||||  || |||| |||   | ||| ||||||||||||||||||||||    
T  40876657 tgtgttgtggtttaatgaaagataaaaatttgagcttttgtcatgtcccttacctccggtgtgtcatgtccttaaaatagttttacaaatcaaacattgg 40876558  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatc 170  Q
    |||| || | ||||  |||  ||| ||| |||||||||||||||    
T  40876557 acaaataaaattgtcttatattgttctttattttttagcaaatc 40876514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 31194023 - 31193949
Alignment:
Q  105 agttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacc 179  Q
    ||||||||||||||||||||  ||||||  ||||||| | || | ||||||||||||||||| ||||||| ||||    
T  31194023 agttttacaaatcaaacattatacaactgaagttgttatgttttatccttcattttttagcatatcaaacacacc 31193949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 125
Target Start/End: Original strand, 36843523 - 36843617
Alignment:
Q  31 ttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattg 125  Q
    |||||||||||||||||||| |||| |  ||||||||| |||| |||||||||  ||| |  |||  |  ||| |||||||||||||||||||||    
T  36843523 ttgtggtttggtgagggacacaaatttcggtttttgtcttgtctcttgcctctgatttattttgtttcaaaaaaagttttacaaatcaaacattg 36843617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 6437408 - 6437448
Alignment:
Q  99 tgaaacagttttacaaatcaaacattggacaactagagttgt 140  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  6437408 tgaaacagttttacaaatcaaacattgcacaa-tagagttgt 6437448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 174
Target Start/End: Original strand, 18278973 - 18279104
Alignment:
Q  41 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaactagagttgt 140  Q
    |||||| |||||||| | ||||||||| | |||| ||| ||| |||||||| |||  || ||||| ||||| ||||||||||||| ||||||| | ||||    
T  18278973 gtgaggaacaaaaattttagtttttgtgccgtcctttgtctccagtttgtcttgtccctaaaaca-ttttataaatcaaacattgcacaacta-aattgt 18279070  T
Q  141 tctattatgtccttcattttttagcaaatcaaac 174  Q
      | |  ||||||| ||||||||||| |||||||    
T  18279071 catgtcctgtccttaattttttagcagatcaaac 18279104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 83374 - 83474
Alignment:
Q  74 ccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaa 173  Q
    |||| ||||||||||||| |||  |  |||||||||||||||||||||| ||  |||||  ||||||  | | ||||||||| ||||||| || ||||||    
T  83374 ccttacctctagtttgtcatgtcccacaaacagttttacaaatcaaacactgtgcaactgaagttgtcttgtcatgtccttcgttttttaacagatcaaa 83473  T
Q  174 c 174  Q
    |    
T  83474 c 83474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 1e-65; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 27103990 - 27104169
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       ||||  |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||    
T  27103990 gacaacttgtacgtgggacaaaaagttgtgcagtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtacctg 27104089  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  27104090 aaacagttttacaaatcaaacattgaacaactagagttgttctgttctgtccttcattttttagcaaatcaaacgcaccc 27104169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 34063159 - 34063336
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  34063159 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggcgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctg 34063258  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    ||| |||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  34063259 aaagagttttacaaatcaaacactggacaactagagttgttctgtcatgtccttcattttttagcaaatcaaacgcac 34063336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 37664357 - 37664177
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  37664357 gacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctg 37664258  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcatt-ttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| ||||||||||||||| |||| |  ||||||||||| ||||||||||||||||||||||    
T  37664257 aaacagttttacaaatcaaacactggacaactagagttattctgtcctgtccttcatttttttagcaaatcaaacgcaccc 37664177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 4052511 - 4052690
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||    
T  4052511 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgtcctgtacctg 4052610  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| |||||||||||||||||||| |  ||||||| |||||||||||||||||||||||||    
T  4052611 aaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtcctttattttttagcaaatcaaacgcaccc 4052690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 30543096 - 30542917
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||| |||    
T  30543096 gacaacttgtacgtgggacgaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtccattgcctccagtttgtcatgtacctg 30542997  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| |||||||||| ||||||| | | ||||||||||||||||||||||||||||||||||    
T  30542996 aaacagttttacaaatcaaacactggacaactaaagttgttatgtcatgtccttcattttttagcaaatcaaacgcaccc 30542917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 4 - 180
Target Start/End: Complemental strand, 29672394 - 29672217
Alignment:
Q  4 aacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaa 103  Q
    ||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29672394 aacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaa 29672295  T
Q  104 cagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttt-tagcaaatcaaacgcaccc 180  Q
    ||||||||| ||||||||| |||||||||||||||||||| |  ||||||||||||||  ||||||||||||||||||    
T  29672294 cagttttacgaatcaaacactggacaactagagttgttctgtcttgtccttcatttttaaagcaaatcaaacgcaccc 29672217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 8673129 - 8672953
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||    
T  8673129 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcatgtacctg 8673030  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgca 177  Q
    |||||||||||||||||||||| |||||||||| ||||||| | |  ||||||||||||||||||||||||||||||    
T  8673029 aaacagttttacaaatcaaacactggacaactatagttgttttgtcctgtccttcattttttagcaaatcaaacgca 8672953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 34101567 - 34101718
Alignment:
Q  29 tgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggac 128  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||    
T  34101567 tgttgtggtttggtgagggacaaaaatatgagtttttgtgttgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggac 34101666  T
Q  129 aactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  34101667 aactagagttgttctgtcttgtccttcattttttagcaaatcaaacgcaccc 34101718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 7394888 - 7394709
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||| |||       |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||    
T  7394888 gacaacttgtacgtgagacaaaaagttgtgttatggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctctagtttgtcatgtacctg 7394789  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||  |||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  7394788 aaacagttttgtaaatcaaacactggacaactagagttgttctgtcatgtccttcattttttagcaaatcaaacgcaccc 7394709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 41709834 - 41709987
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||||||||||||| |||    
T  41709834 tgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcatttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactgg 41709933  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  41709934 acaactagagttgttctgtcctgtccttcattttttagcaaatcaaacgcaccc 41709987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 31513631 - 31513478
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | || |||||||| |||||||||||||||| |||    
T  31513631 tgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcatctacctgaaacaattttacaaatcaaacactgg 31513532  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    | ||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  31513531 ataactagagttgttctgtcatgtccttcattttttagcaaatcaaacgcaccc 31513478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 39642914 - 39643093
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||| ||||||||||||       ||||||||||||||||||||||||||||||| ||||||| || ||||||||||||| ||||||||||||| |||    
T  39642914 gacaacctgtacgtgggacagaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttatcttgtcccttgcctccagtttgtcctgtacctg 39643013  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||| |||||||||| |||||||||  ||||||||| | ||||||||||||||||||||||||||||||||||    
T  39643014 aaacagttttaaaaatcaaacactggacaactgaagttgttctgtcatgtccttcattttttagcaaatcaaacgcaccc 39643093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 3 - 181
Target Start/End: Original strand, 30501178 - 30501356
Alignment:
Q  3 caacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaa 102  Q
    |||||||||||||||||       |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||| |||||    
T  30501178 caacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgtgtttttgtcctgtcccttgcctccagtttgtcttgtacctgaa 30501277  T
Q  103 acagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccca 181  Q
    |||||||||||||||||||| ||| |||||  |||||||||   |||||||||||||||||||||||||||||||||||    
T  30501278 acagttttacaaatcaaacactgggcaactgaagttgttctgccatgtccttcattttttagcaaatcaaacgcaccca 30501356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 37618440 - 37618287
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| | ||||||||||| |||||||||||||||||||||||||  ||    
T  37618440 tgtgttgtggtttggtgagggacaaaaatatcagtttttgtcctgtcctttgcctccaatttgtcctgtacctgaaacagttttacaaatcaaacaccgg 37618341  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||| |||||||||| | |||||||||||||| |||||||||||||||||||    
T  37618340 acaactggagttgttctgtcatgtccttcattttctagcaaatcaaacgcaccc 37618287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 10467095 - 10467272
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||| ||||| |||||||||| |||||||||| |||| |||||||| ||||||||||||| ||     
T  10467095 gacaacttgtacgtgggacaaaaagttgtgttgtggtttgctgaggaacaaaaatatcagtttttgtcttgtctcttgcctccagtttgtcctgtaccta 10467194  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    |||||||||||||||||||||| |||||||||||||||||||| |  |||||||||||||||||||||||||||||||    
T  10467195 aaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaacgcac 10467272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 32 - 180
Target Start/End: Original strand, 37474762 - 37474910
Alignment:
Q  32 tgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaac 131  Q
    ||||||||| |||||||||||||||| ||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  37474762 tgtggtttgctgagggacaaaaatataagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaac 37474861  T
Q  132 tagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    | |||||||||| | || |||||||||||||||||||||||||||||||    
T  37474862 tggagttgttctgtcatatccttcattttttagcaaatcaaacgcaccc 37474910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 45446486 - 45446666
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||| |||| |||    
T  45446486 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgaggaacaaaaatatgagtttttatcctgtcccttgcctccagtttgtcgtgtacctg 45446585  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccca 181  Q
    |||||||||||||||||||||| ||||||||||||||| || | |  | ||||||||||||||||||||||||||||||||    
T  45446586 aaacagttttacaaatcaaacactggacaactagagttattttgtcttatccttcattttttagcaaatcaaacgcaccca 45446666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 27 - 181
Target Start/End: Complemental strand, 5968912 - 5968758
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||| |||    
T  5968912 tgtgctgtggtttggtgaaggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcatgtaccttaaacagttttacaaatcaaacactgg 5968813  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccca 181  Q
    ||||||||||||||| | |  | |||||||||||||||||||| |||||||||||    
T  5968812 acaactagagttgttttgtcctatccttcattttttagcaaattaaacgcaccca 5968758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 29563300 - 29563158
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  29563300 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctcgagtttgtcctgtacctg 29563201  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttct 143  Q
    |||||||||||||||||||||| |||| |||||||||||||||    
T  29563200 aaacagttttacaaatcaaacactggataactagagttgttct 29563158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 32 - 181
Target Start/End: Original strand, 37861921 - 37862069
Alignment:
Q  32 tgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaac 131  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||| |||||||||||| |||||    
T  37861921 tgtggtttggtgagggataaaaatatgagtttttgtcctgtcacttgcctccagtttgtcctgtacctgaaacagttttactaatcaaacattgaacaac 37862020  T
Q  132 tagagttgttctattatgtccttcattttttagcaaatcaaacgcaccca 181  Q
    |||||||| | | || ||||||||||||||||||||||||||||||||||    
T  37862021 tagagttg-tatgttctgtccttcattttttagcaaatcaaacgcaccca 37862069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 29611129 - 29610952
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||| ||||||||||       ||||||||||||||| ||||||||||||| | |||||||||||||||||||||||| ||||||| ||||  |||    
T  29611129 gacaacttttacgtgggacaaaaagttgtgttgtggtttggcgagggacaaaaatttcagtttttgtcctgtcccttgcctccagtttgttctgtccctg 29611030  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    ||||||||||||||||||||||||||||||||  ||||||||| | ||||||||||||||||| ||||||||||||||    
T  29611029 aaacagttttacaaatcaaacattggacaactgaagttgttctgtcatgtccttcattttttaacaaatcaaacgcac 29610952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 6386607 - 6386786
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||| |||       |||||||||||||||||||||||||||||||||||||||||||| ||  || |||| |||||||||| || |||    
T  6386607 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctatcttttacctccagtttgtcctatacctg 6386706  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||| |||||||||| |||||||||| ||||||| | || |||||||||||||||||||||||||||||||||    
T  6386707 aaacagttttataaatcaaacactggacaactacagttgttatgttttgtccttcattttttagcaaatcaaacgcaccc 6386786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 25478274 - 25478453
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||| ||||       |||| |||| |||| |||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| |||    
T  25478274 gacaacttgtacgtaggacaaaaagttgtgctgtgatttgatgagggacaaaaatatgagtttttttcctgtcccttgtctccagtttgtcctgtacctg 25478373  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||| ||||| |||||||||||||||||| | |  |||||||||||||||||||||||||||||||||    
T  25478374 aaacagttttacaaattaaacactggacaactagagttgttatgtcctgtccttcattttttagcaaatcaaacgcaccc 25478453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 32020075 - 32019896
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||| ||       |||| ||||||||||||||||| |||||||||||||||||||||  ||||||| || ||||||||||||| |||    
T  32020075 gacaacttgtacgtggaacaaaaagttgtgctgtggtttggtgagggataaaaatatgagtttttgtcctaccccttgcttccagtttgtcctgtacctg 32019976  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| || ||||||||||||||||| |  ||||||||| |||||||||||||||||||||||    
T  32019975 aaacagttttacaaatcaaacactgaacaactagagttgttctgtcctgtccttcaatttttagcaaatcaaacgcaccc 32019896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 3251704 - 3251551
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| |||||||||||||||||||||||||| ||||||||| ||||| |||||||| ||||||||||||| |||||||||||||| |||||||||| |||    
T  3251704 tgtgatgtggtttggtgagggacaaaaatataagtttttgttctgtcgcttgcctccagtttgtcctgtacctgaaacagttttataaatcaaacactgg 3251605  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||||||||| |  | ||||| |||||||||||||||||||||||||    
T  3251604 acaactagagttgttctgtcttatcctttattttttagcaaatcaaacgcaccc 3251551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 7591495 - 7591342
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||||||||||||| ||||| |||||||||| ||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||| |||    
T  7591495 tgtgttgtggtttgctgaggcacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactgg 7591396  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||  ||||||||| |  ||||||||||||||||||||| |||||||||||    
T  7591395 acaactgaagttgttctgtcctgtccttcattttttagcaaaacaaacgcaccc 7591342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 34 - 175
Target Start/End: Original strand, 22999322 - 22999463
Alignment:
Q  34 tggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaacta 133  Q
    ||||||| |||||||||||||||| ||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||      
T  22999322 tggtttgctgagggacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaaccg 22999421  T
Q  134 gagttgttctattatgtccttcattttttagcaaatcaaacg 175  Q
    |||||||||| | |||||||||||||||||||||||||||||    
T  22999422 gagttgttctgtcatgtccttcattttttagcaaatcaaacg 22999463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 27 - 174
Target Start/End: Original strand, 40389097 - 40389244
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| |||||||||||||| || |||||||| |||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||| |||    
T  40389097 tgtgctgtggtttggtgagagataaaaatatcagtttttgtcctgtcctttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactgg 40389196  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaac 174  Q
    |||||| |||||||||| | |||||||||||||| |||||||||||||    
T  40389197 acaactggagttgttctgtcatgtccttcattttctagcaaatcaaac 40389244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 14005118 - 14004943
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||     
T  14005118 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgatggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcctgtacctc 14005019  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgc 176  Q
    |||||||||||||||||||| | |||||||||| | ||||| | |  | |||||||||||||||||||||||||||    
T  14005018 aaacagttttacaaatcaaatactggacaactaaaattgttatgtcctatccttcattttttagcaaatcaaacgc 14004943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 41548649 - 41548828
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       ||||||||||| || ||||| |||||||||| ||||||||||||||| |||||||| |||||||| |||| |||    
T  41548649 gacaacttgtacgtgggacaaaaagttgtgttgtggtctgctgaggtacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcatgtatctg 41548748  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| |||||||||  ||||||||| |  |||||||||||||||||||||| ||||||||||    
T  41548749 aaacagttttacaaatcaaacactggacaactgaagttgttctgtcctgtccttcattttttagcaaattaaacgcaccc 41548828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 12753399 - 12753226
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||| |||||||       |||||||||||||||||||| ||||||||||||||||||||| ||||  ||||||  ||||||||||||| |||    
T  12753399 gacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgaggaacaaaaatatgagtttttgtcttgtcatttgccttcagtttgtcctgtacctg 12753300  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaac 174  Q
    ||||||| |||||||||||||| |||||||||||||||||| | |  |||||||||||||||||||||||||||    
T  12753299 aaacagtcttacaaatcaaacactggacaactagagttgttttgtcctgtccttcattttttagcaaatcaaac 12753226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 34 - 178
Target Start/End: Original strand, 17805755 - 17805899
Alignment:
Q  34 tggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaacta 133  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||| || |||| ||    
T  17805755 tggtttggtgaggaacaaaaatatgagtttttgtcttgtcccttgcctctagtttgtcctgtacttgaaacagttttacaaatcaaacactgaacaatta 17805854  T
Q  134 gagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    |||||| ||| ||||||||||||||||| | ||||| ||||||||    
T  17805855 gagttggtctgttatgtccttcatttttaaacaaattaaacgcac 17805899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 15001500 - 15001671
Alignment:
Q  4 aacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaa 103  Q
    ||||||||||||||||       ||||||||||||||||||||||||||||| | ||||||||| |||||  ||||||| ||||||||||||  ||||||    
T  15001500 aacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagtttttgttctgtctattgcctccagtttgtcctgtccctgaaa 15001599  T
Q  104 cagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacg 175  Q
    ||||||||||||||||||| |||||||||  ||||||||| |  |||||||||||||||| |||||||||||    
T  15001600 cagttttacaaatcaaacactggacaactgaagttgttctgtcctgtccttcattttttatcaaatcaaacg 15001671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 32 - 176
Target Start/End: Complemental strand, 13406978 - 13406834
Alignment:
Q  32 tgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaac 131  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||| | || ||||||||||||||||||| ||||| | ||||||    
T  13406978 tgtggtttggtgagggacaaaaatatgagtttttgttctgttccttgcctccagtttgtcatatacctgaaacagttttacaaattaaacactagacaac 13406879  T
Q  132 tagagttgttctattatgtccttcattttttagcaaatcaaacgc 176  Q
    ||||||||||||    | |||||||||||||||||||||||||||    
T  13406878 tagagttgttctgccctatccttcattttttagcaaatcaaacgc 13406834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 35225719 - 35225872
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| |||||||||| |||||||||||||   |||||||||||||||||||||||| ||||||||||||  ||||||| |||||||||| |||||| |||    
T  35225719 tgtgatgtggtttggcgagggacaaaaattgcagtttttgtcctgtcccttgcctccagtttgtcctgtccctgaaactgttttacaaaccaaacactgg 35225818  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||| |||||||||| |  | |||||||||||||| ||||||||||||||||    
T  35225819 acaactggagttgttctgtcctatccttcattttttatcaaatcaaacgcaccc 35225872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 32 - 178
Target Start/End: Original strand, 45114117 - 45114263
Alignment:
Q  32 tgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaac 131  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||| ||||| ||||||||||||||||||||||||| || ||||     
T  45114117 tgtggtttggtgagggacaaaaatatgagtttttgtcctctcccttgcatctcgtttgttctgtacctgaaacagttttacaaatcaaacactgaacaat 45114216  T
Q  132 tagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    |  ||||||  | |  |||||||||| ||||||||||||||||||||    
T  45114217 tgaagttgtcatgtcctgtccttcatgttttagcaaatcaaacgcac 45114263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 17520626 - 17520804
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||| |||||||       ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||| | ||| || || | ||     
T  17520626 gacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaaaa-tataagtttttgccctgtcccttgcctccattttatcatgcaccta 17520724  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||| ||||||||||||||||  |||||||| |||||||||| | ||||||||||||||||||||||| |||| |||||    
T  17520725 aaacacttttacaaatcaaacaccggacaactggagttgttctgtcatgtccttcattttttagcaaattaaacacaccc 17520804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 32 - 177
Target Start/End: Original strand, 31732126 - 31732257
Alignment:
Q  32 tgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaac 131  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||              ||||||||||||||||| ||||||||    
T  31732126 tgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctcaagtttgtc--------------gttttacaaatcaaacactggacaac 31732211  T
Q  132 tagagttgttctattatgtccttcattttttagcaaatcaaacgca 177  Q
    || ||||||||| |  ||||||||||||||||||||||||||||||    
T  31732212 taaagttgttctgtcctgtccttcattttttagcaaatcaaacgca 31732257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 86 - 180
Target Start/End: Complemental strand, 32303597 - 32303503
Alignment:
Q  86 tttgtcctgtagctgaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||| ||||||||||||||||||||||||| || ||||||| ||||||||||| || |||||| ||||||||||||||||||||||||    
T  32303597 tttgtcctgtacctgaaacagttttacaaatcaaacactgaacaactaaagttgttctatcatttccttcgttttttagcaaatcaaacgcaccc 32303503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 16485857 - 16485704
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| |||||||||| |||||||||||||   ||||||||| |||||| ||||||  | |||||| |||  |||||||  |||||||||||||||| |||    
T  16485857 tgtgctgtggtttggcgagggacaaaaattgcagtttttgttctgtcctttgccttcaatttgtcatgtccctgaaactattttacaaatcaaacactgg 16485758  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||  | ||||||||| |||||||||||| |||| ||||||||||||||||    
T  16485757 acaactgaaattgttctatcatgtccttcattctttatcaaatcaaacgcaccc 16485704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 21272715 - 21272880
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| |||||||||||||||||||||||||||||||||||||||||| ||                 ||| |||    
T  21272715 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcgct-----------------gtatctg 21272797  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacccaaa 183  Q
    |||||||||||||||||||||| |||||||||| ||||||||| |  |||| |||||| ||||||||||||||||||||||||    
T  21272798 aaacagttttacaaatcaaacactggacaactaaagttgttctctcgtgtcattcattctttagcaaatcaaacgcacccaaa 21272880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 174
Target Start/End: Complemental strand, 10656734 - 10656587
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    ||||||||||||| |||| |||||||||  | |||||||||||||||  |||||||||||||||| |||  || ||| || ||||||||||||| | |||    
T  10656734 tgtgttgtggttttgtgaaggacaaaaaattcagtttttgtcctgtcttttgcctctagtttgtcatgtctctaaaaaagatttacaaatcaaatactgg 10656635  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaac 174  Q
    |||| |   ||||||||   ||||||||||||||||||||||||||||    
T  10656634 acaattgaggttgttctgacatgtccttcattttttagcaaatcaaac 10656587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 38047481 - 38047556
Alignment:
Q  105 agttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||| |||||||||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  38047481 agttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaacgcaccc 38047556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 32303659 - 32303588
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgt 72  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||    
T  32303659 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgt 32303588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 22756459 - 22756311
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    ||||||||||| |  ||||||| |||||| |  ||||||||| |||| |||||||| | |||||||| |  | ||||||||||||||||||||||||||     
T  22756459 tgtgttgtggtataatgagggataaaaatttatgtttttgtcttgtctcttgcctcaaatttgtcctatcccagaaacagttttacaaatcaaacattgt 22756360  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    | |||| ||||||     || ||||||||||||||||||| ||||||| |||||    
T  22756359 ataactggagttg-----ttttgtccttcattttttagcagatcaaacacaccc 22756311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 15351821 - 15351907
Alignment:
Q  98 ctgaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacccaaat 184  Q
    |||||||| ||||||||||||||||  | | ||||  ||||||||| |||  || ||||||||||||||||| ||||||||||||||    
T  15351821 ctgaaacaattttacaaatcaaacacggcataactgtagttgttctgttacatcattcattttttagcaaatgaaacgcacccaaat 15351907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 162
Target Start/End: Complemental strand, 16595220 - 16595063
Alignment:
Q  4 aacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaa 103  Q
    ||||||||||||||||       |||||||||| || | ||||||||||| |    ||||||||||||||||||||||  ||||||| ||||  | ||||    
T  16595220 aacttgtacgtgggacaaaaagttgtgttgtggattagcgagggacaaaacttcatgtttttgtcctgtcccttgcctacagtttgttctgtcccagaaa 16595121  T
Q  104 cagttttacaaatcaaacattggacaactagagttgttctattatgtccttcatttttt 162  Q
    ||  ||||||||||||||| |  |||||| | ||||| || | ||||||||||||||||    
T  16595120 ca-atttacaaatcaaacaatatacaactggtgttgtcctgtcatgtccttcatttttt 16595063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 141
Target Start/End: Complemental strand, 10320325 - 10320213
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||||||||||||||||||||| || ||| |  |||||| | | ||||||||| || |||||||| |||  || |||| |||||||||||||||||||      
T  10320325 tgtgttgtggtttggtgagggataagaatttctgttttttttc-gtcccttgc-tcaagtttgtcatgtccctaaaacggttttacaaatcaaacattat 10320228  T
Q  127 acaactagagttgtt 141  Q
    |||||| || |||||    
T  10320227 acaacttgaattgtt 10320213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 141
Target Start/End: Original strand, 10531415 - 10531451
Alignment:
Q  105 agttttacaaatcaaacattggacaactagagttgtt 141  Q
    |||| |||||||||||||||| |||||||||||||||    
T  10531415 agttctacaaatcaaacattgtacaactagagttgtt 10531451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 36426295 - 36426202
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaaca 122  Q
    ||||||||||||| || |  ||||||| | | |||||||||| | ||||||||||| || ||||| |||  ||||| || ||||||||||||||||    
T  36426295 tgtgttgtggtttagtaaatgacaaaatttttagtttttgtcttatcccttgcctcaagattgtcgtgt--ctgaaccaattttacaaatcaaaca 36426202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 127; Significance: 1e-65; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 15277035 - 15276856
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||||||        |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  15277035 gacaacttgtacgtgggaaaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctg 15276936  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||| ||||||    
T  15276935 aaacagttttacaaatcaaacattagacaactagagttgttctgtcatgtccttcattttttagcaaatcaaatgcaccc 15276856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 10324209 - 10324035
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||| |||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  10324209 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctg 10324110  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacg 175  Q
    |||||||||||||||| ||||| || ||||||||||||||||| || ||||||||||||||||||||||||||||    
T  10324109 aaacagttttacaaattaaacactgaacaactagagttgttctgttctgtccttcattttttagcaaatcaaacg 10324035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 167021 - 166845
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||    
T  167021 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgttatgtcccttgcctctagtttgtcctgtacctg 166922  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgca 177  Q
    |||||||||||||||||||||| ||||||| |||||||||||| | || ||||||||||||||||||||||||||||    
T  166921 aaacagttttacaaatcaaacactggacaagtagagttgttctgtcatatccttcattttttagcaaatcaaacgca 166845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 3259714 - 3259890
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||    
T  3259714 gacaacttgtacgtgggataaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtctcttgcctccagtttgtcctgtacctg 3259813  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgca 177  Q
    |||||||||||||||||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||||||    
T  3259814 aaacagttttacaaatcaaacactggacaactagagttgttttgtcatgtccttcattttttagcaaatcaaacgca 3259890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 24203393 - 24203572
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||     
T  24203393 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtctcttgcctccagtttgtcctgtaccta 24203492  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| |||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||    
T  24203493 aaacagttttacaaatcaaacactggacaactatagttgttctgtcatgtccttcattttttagcaaatcaaacgcaccc 24203572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 11382095 - 11382273
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||| |||       |||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  11382095 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgag--acaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctg 11382192  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccca 181  Q
    |||||||||||||||| ||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  11382193 aaacagttttacaaattaaacactggacaactagagttgttctgtcatgtccttcattttttagcaaatcaaacgcaccca 11382273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 32409924 - 32409771
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||| |||    
T  32409924 tgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgtctccagtttgtcctgtacctgaaacagttttacaaatcaaacactgg 32409825  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    | |||||||||| |||| | ||||||||||||||||||||||||||||||||||    
T  32409824 ataactagagttattctgtcatgtccttcattttttagcaaatcaaacgcaccc 32409771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 2614927 - 2615100
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||    
T  2614927 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgtcctgtacctg 2615026  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaac 174  Q
    ||||| |||||||||||||||| |||||||||||||||||||| |  |||||||||||||||||||||||||||    
T  2615027 aaacaattttacaaatcaaacagtggacaactagagttgttctgtcttgtccttcattttttagcaaatcaaac 2615100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 10960031 - 10960210
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||    
T  10960031 gacaacttgtacgtgggacaaaaagttgtgttgtggtttgttgagggacaaaaatatgagtttttgtcctgtcccttgccttcagtttgtcctgtacctg 10960130  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| ||||||||| |||||||||| |  | |||||||||||||||||||||||||| ||||    
T  10960131 aaacagttttacaaatcaaacactggacaactggagttgttctgtcctatccttcattttttagcaaatcaaacgtaccc 10960210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 2 - 180
Target Start/End: Complemental strand, 11613888 - 11613710
Alignment:
Q  2 acaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctga 101  Q
    ||||||||||||||||||       |||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||| | ||||||||||| ||||    
T  11613888 acaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgtctccattttgtcctgtacctga 11613789  T
Q  102 aacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |  |||||||||||||||||||||||||||||||||    
T  11613788 aacagttttacaaatcaaacactggacaactaaagttgttctgtcctgtccttcattttttagcaaatcaaacgcaccc 11613710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 3932905 - 3932729
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| |||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||| |||    
T  3932905 gacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagagacaaaaatatgagtttttgtcctgccccttgcctccagtttgtcctgtacctg 3932806  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgca 177  Q
    |||||||||||||||||||||| || ||||||||| ||||||| |  ||||||||||||||||||||||||||||||    
T  3932805 aaacagttttacaaatcaaacactgaacaactagaattgttctgtcctgtccttcattttttagcaaatcaaacgca 3932729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 17867866 - 17868045
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||| |||||||||||||       |||| ||||||||| |||||||||||||||||||||||| || ||||||||||||| ||||||||||||| |||    
T  17867866 gacaatttgtacgtgggacaaaaagttgtgctgtggtttgatgagggacaaaaatatgagtttttatcttgtcccttgcctccagtttgtcctgtacctg 17867965  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| |||||| ||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  17867966 aaacagttttacaaatcaaacactggacagctagagttgttctgtcctgtccttcattttttagcaaatcaaacgcaccc 17868045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 17877649 - 17877828
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||| |||||||||||||       |||| ||||||||| |||||||||||||||||||||||| || ||||||||||||| ||||||||||||| |||    
T  17877649 gacaatttgtacgtgggacaaaaagttgtgctgtggtttgatgagggacaaaaatatgagtttttatcttgtcccttgcctccagtttgtcctgtacctg 17877748  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| |||||| ||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  17877749 aaacagttttacaaatcaaacactggacagctagagttgttctgtcctgtccttcattttttagcaaatcaaacgcaccc 17877828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 15277378 - 15277199
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||||||        |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||     
T  15277378 gacaacttgtacgtgggataaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctt 15277279  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||| |||||||||||||||| ||||||| |||||||||| | |  |||| ||||||||||||||||||||||||||||    
T  15277278 aaacaattttacaaatcaaacactggacaaatagagttgttttgtcttgtctttcattttttagcaaatcaaacgcaccc 15277199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 29 - 178
Target Start/End: Original strand, 11212316 - 11212465
Alignment:
Q  29 tgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggac 128  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||  ||| ||||||||||||| ||||||||||||||||||||||||| |||||    
T  11212316 tgttgtggtttggtgagggacaaaagtatgagtttttgtcatgtcccttatctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggac 11212415  T
Q  129 aactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    ||||||||||||||| |   ||||||||||||||||||||||||||||||    
T  11212416 aactagagttgttctgtcccgtccttcattttttagcaaatcaaacgcac 11212465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 11279159 - 11279333
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||| |||       ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||  ||    
T  11279159 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccatgcctccagtttgtcctgtacttg 11279258  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacg 175  Q
    |||||||||||||||||||||| ||||||||| |||||||||| |   ||| |||||||||||||||||||||||    
T  11279259 aaacagttttacaaatcaaacactggacaactggagttgttctgtcccgtctttcattttttagcaaatcaaacg 11279333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 10485188 - 10485369
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||| |||||||||||||||| ||||||||||||||| |||||||| ||||||||||||| |||    
T  10485188 gacaacttgtacgtgggacaaaaagttgtgctgtggtttgctgagggacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctg 10485287  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacccaa 182  Q
    ||| | |||||||||||||||| ||||||||| |||||||| | |  |||||||||||||||||||||||||||||||||||    
T  10485288 aaataattttacaaatcaaacactggacaactggagttgttttgtcttgtccttcattttttagcaaatcaaacgcacccaa 10485369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 34 - 181
Target Start/End: Original strand, 3379774 - 3379921
Alignment:
Q  34 tggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaacta 133  Q
    |||||||||||| ||||||||||| |||||||||| |||| |||||||| ||||||||||||| |||||||||||||| |||||||||| ||||||||||    
T  3379774 tggtttggtgagcgacaaaaatatcagtttttgtcttgtctcttgcctccagtttgtcctgtatctgaaacagttttataaatcaaacactggacaacta 3379873  T
Q  134 gagttgttctattatgtccttcattttttagcaaatcaaacgcaccca 181  Q
     ||||||||||| ||||||||||||||||||||||||||||| |||||    
T  3379874 aagttgttctatcatgtccttcattttttagcaaatcaaacgtaccca 3379921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 18057550 - 18057729
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||  ||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||| |||| ||     
T  18057550 gacaacttgtacgtgggacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttacatctagtttgtcatgtatctc 18057649  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||||||||||| |  |||||| ||||  |||||||||||||||||| ||||||||||||||    
T  18057650 aaacagttttacaaatcaaacattggacaattgaagttgtcctatcctgtccttcattttttagcgaatcaaacgcaccc 18057729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 5 - 180
Target Start/End: Original strand, 34176865 - 34177040
Alignment:
Q  5 acttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaac 104  Q
    |||||||||||||||       |||| |||| ||||||||| |||||||||||||||||||||| |||| |||||||| |||||||| |||| |||||||    
T  34176865 acttgtacgtgggacaaaaagttgtgctgtgatttggtgagagacaaaaatatgagtttttgtcatgtcacttgcctccagtttgtcatgtacctgaaac 34176964  T
Q  105 agttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||||||||||   |||||||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  34176965 agttttacaaatcaaacaagtgacaactagagttgttctgtcttgtccttcattttttagcaaatcaaacgcaccc 34177040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 17443293 - 17443466
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||  ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  17443293 gacaacttgtacgtgggacaaaaagttgtactgtggtttggtgagggataaaaatatgagtttttgtcctgtcccttgcatctagtttgtcctgtacctg 17443392  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacc 179  Q
    |||  ||||||||||||||||| |||||||||| |||||| |     ||||||||||||||||||||||||||||||||    
T  17443393 aaatggttttacaaatcaaacactggacaactaaagttgtcc-----tgtccttcattttttagcaaatcaaacgcacc 17443466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 24242695 - 24242837
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||| |||    
T  24242695 gacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgttgtgtcccttgcctccagtttgtcctgtacctg 24242794  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttct 143  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  24242795 aaacagttttacaaatcaaacactggacaactagagttgttct 24242837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 32 - 180
Target Start/End: Complemental strand, 14925523 - 14925375
Alignment:
Q  32 tgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaac 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  14925523 tgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttacatctagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaac 14925424  T
Q  132 tagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |  ||||||  | |  |||||||||||||||| | ||||||||||||||    
T  14925423 tgaagttgtcatgtcctgtccttcattttttaacgaatcaaacgcaccc 14925375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 32132478 - 32132342
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||     
T  32132478 gacaacttgtacgtgggacaaaaagttgtgttgtggattggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtaccta 32132379  T
Q  101 aaacagttttacaaatcaaacattggacaactagagt 137  Q
    |||||||||||||||||||||| ||||||||||||||    
T  32132378 aaacagttttacaaatcaaacactggacaactagagt 32132342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 31870172 - 31870016
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtag---ctgaaacagttttacaaatcaaacat 123  Q
    ||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||| |||| |   |||| ||||||||||||||||||||     
T  31870172 tgtgttgtggtttggtgagggacaaaaatatcagtttttgttttgtcccttgcctctagtttgttctgttgttcctgagacagttttacaaatcaaacac 31870073  T
Q  124 tggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||| |||||||| | |   ||||||||||||||||||||||||||||||||    
T  31870072 tggacaactggagttgttatgtccagtccttcattttttagcaaatcaaacgcaccc 31870016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 9902756 - 9902580
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||  |||||||||||||||| ||||||||||||||||||| ||||||||||||||| || |||    
T  9902756 gacaacttgtacgtgggacaaaaagttgtgctgtggtttaatgagggacaaaaatatcagtttttgtcctgtcccttacctctagtttgtcctatacctg 9902657  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgca 177  Q
    ||||||||  |||||| ||||| || ||||||  |||||||||||  | ||||||||||||||||||||||||||||    
T  9902656 aaacagttcaacaaattaaacactgaacaactgaagttgttctatcctatccttcattttttagcaaatcaaacgca 9902580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 11675446 - 11675293
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||||| |||||||||||| ||||||||||| |||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||| ||     
T  11675446 tgtgttatggtttggtgagagacaaaaatatcagtttttgtcctgtcctttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactga 11675347  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||| || ||||| | |  |||| ||  ||||||||||||||||||||||||    
T  11675346 acaactggaattgttttgtcttgtctttatttttttagcaaatcaaacgcaccc 11675293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 27 - 179
Target Start/End: Original strand, 3290727 - 3290868
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |           |||||| ||||||||||||| ||     
T  3290727 tgtgttgtggtttggtaagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgac-----------acagttatacaaatcaaacactga 3290815  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacc 179  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  3290816 acaactagagttgttctgtcatgtccttcattttttagcaaatcaaacgcacc 3290868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 29054387 - 29054566
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||| |||       |||| |||||||||| |||||||||||||   |||||||||| |||||||||| || | ||||||||||  |||    
T  29054387 gacaacttgtacgtgagacaaaaagttgtgctgtggtttggcgagggacaaaaattgtagtttttgtcatgtcccttgcttccaatttgtcctgttcctg 29054486  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||| |||||||||||||||||||||||| ||  | || |||| || |||||||||||||||| ||||||||||||||||    
T  29054487 aaactgttttacaaatcaaacattggacagctttaattattctgttctgtccttcattttttatcaaatcaaacgcaccc 29054566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 4494213 - 4494079
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagttttt-gtcctgtcccttgcctctagtttgtcctgtagct 99  Q
    |||||||||||||||||||       |||  |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||| ||    
T  4494213 gacaacttgtacgtgggacaaaaagttgtactgtggtttggtgagggacaaaaatatgagttttttgtcctgtcacttgcctccagtttgtcctgtacct 4494114  T
Q  100 gaaacagttttacaaatcaaacattggacaactag 134  Q
    |||| ||| |||||||||||||| |||||||||||    
T  4494113 gaaagagtcttacaaatcaaacactggacaactag 4494079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 32860108 - 32860261
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| |||||||||| || ||||||||||   || ||||||| ||||||||||||| |||||||| |||  ||||||| ||||||||||||||||| |||    
T  32860108 tgtgctgtggtttggcgatggacaaaaattgcagcttttgtcatgtcccttgcctccagtttgtcatgtccctgaaactgttttacaaatcaaacactgg 32860207  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||| | |||||||| | | ||||||||||||||||| ||||||||||||||||    
T  32860208 acaattggagttgttttgtcatgtccttcattttttatcaaatcaaacgcaccc 32860261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 18597256 - 18597079
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||| ||||||||||       ||||||||||||||||||||||||||||| | || ||||||| |||||||||||||  ||||||| | |  |||    
T  18597256 gacaacttatacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagattttgtcatgtcccttgcctccggtttgtcatatccctg 18597157  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    |||||||||||||||||||||| || ||||||  | |||||| ||   ||||||||||||||| ||||||||||||||    
T  18597156 aaacagttttacaaatcaaacactgaacaactgaaattgttcaatcccgtccttcattttttaacaaatcaaacgcac 18597079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 8177979 - 8177803
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||| |||||||||       |||||||||||||||| |||||||||||||| | ||||| |||||||||||||||| |||||||  |||| |||    
T  8177979 gacaacttgaacgtgggacaaaaagttgtgttgtggtttggtaagggacaaaaatatca-tttttatcctgtcccttgcctccagtttgttttgtacctg 8177881  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    ||||||||||| ||||||||||  ||| || |  ||||||| | | |||||||| ||||||||||||||||| |||||    
T  8177880 aaacagttttataaatcaaacaccggataattgaagttgttttttcatgtcctttattttttagcaaatcaatcgcac 8177803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 23636280 - 23636433
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||||||||||||  |||   |||||||||||||||||| |||| | |||||| || ||||| || |||| || ||||| |||||||||||||||| ||     
T  23636280 tgtgttgtggtttaatgaataacaaaaatatgagtttttatcctattccttgcatccagtttatcatgtacctaaaacaattttacaaatcaaacactga 23636379  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||  ||||||||| | || |||||||||||||||||||||||||| ||||    
T  23636380 acaactgaagttgttctgtcatatccttcattttttagcaaatcaaacgtaccc 23636433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 178
Target Start/End: Complemental strand, 14808073 - 14807939
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    ||||||||||||||||||||||||||||||| | ||||| |||| ||||||||||||||||| |                 ||||||||||||||| |||    
T  14808073 tgtgttgtggtttggtgagggacaaaaatatcaatttttatcctatcccttgcctctagtttat-----------------tttacaaatcaaacactgg 14807991  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||||||||    
T  14807990 acaactggagttgttctgtcatgtccttcattttttagcaaatcaaacgcac 14807939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 62 - 173
Target Start/End: Original strand, 9614066 - 9614177
Alignment:
Q  62 ttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttt 161  Q
    ||||||| ||||||||||||| ||||| ||||||   ||||||||||||||||||||||||||| ||||||  |||| |  | |||||||||||||||||    
T  9614066 ttttgtcatgtcccttgcctccagtttatcctgtccttgaaacagttttacaaatcaaacattgtacaactgaagttttcttgttatgtccttcattttt 9614165  T
Q  162 tagcaaatcaaa 173  Q
    ||||| ||||||    
T  9614166 tagcagatcaaa 9614177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 34684081 - 34683953
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||| ||       |||||||||||||||||||||||||||||  ||||||||||| ||||||||||||| |||||||| |||| |      
T  34684081 gacaacttgtacgtggaacaaaaagttgtgttgtggtttggtgagggacaaaaat--gagtttttgtcgtgtcccttgcctccagtttgtcatgtacc-- 34683986  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttg 139  Q
          |||||||||||||| | ||||||||||||||||    
T  34683985 ------ttttacaaatcaaaaactggacaactagagttg 34683953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 170
Target Start/End: Complemental strand, 9200453 - 9200316
Alignment:
Q  34 tggtttggtgagggacaaaaatatgagtttttgtcctgtccctt-gcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaact 132  Q
    ||||||||||||||| || ||| |  ||||||||| |||| ||| |||||||||||||| |||   | ||||||||||||||||||||||||| ||||||    
T  9200453 tggtttggtgagggagaagaatttttgtttttgtcttgtctcttagcctctagtttgtcatgtctttaaaacagttttacaaatcaaacattgtacaact 9200354  T
Q  133 agagttgttctattatgtccttcattttttagcaaatc 170  Q
     |||||||  | |  ||||||| | |||||||||||||    
T  9200353 tgagttgtcatgtcttgtccttaactttttagcaaatc 9200316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 101 - 180
Target Start/End: Complemental strand, 14925215 - 14925136
Alignment:
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||| |||||||||||||||| |||||||||  ||||||  | |  |||||||||||||||||||||||||||||||||    
T  14925215 aaacaattttacaaatcaaacactggacaactgaagttgtcatgtcctgtccttcattttttagcaaatcaaacgcaccc 14925136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 174
Target Start/End: Original strand, 13415861 - 13415928
Alignment:
Q  107 ttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaac 174  Q
    |||||||||||||||| || ||||||||||||||| | || |||| ||| ||||||||||||||||||    
T  13415861 ttttacaaatcaaacactgtacaactagagttgttatgttctgtctttcgttttttagcaaatcaaac 13415928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 33041403 - 33041472
Alignment:
Q  107 ttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgc 176  Q
    |||||||||||||||| ||||||||| |||||||||| |  | | |||||||||||| ||||||||||||    
T  33041403 ttttacaaatcaaacactggacaactggagttgttctgtcctattcttcattttttaacaaatcaaacgc 33041472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 27824680 - 27824620
Alignment:
Q  72 tcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaact 132  Q
    |||||||||||||||||||||| |  |  |||||||||||||||||||||| || ||||||    
T  27824680 tcccttgcctctagtttgtcctttcccaaaaacagttttacaaatcaaacactgtacaact 27824620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 24785112 - 24785167
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctc 82  Q
    ||||||||||||| ||||| ||||| ||| | |||||||||| |||||||||||||    
T  24785112 tgtgttgtggtttagtgagcgacaagaatttcagtttttgtcatgtcccttgcctc 24785167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 127; Significance: 1e-65; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 24002373 - 24002552
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  24002373 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctg 24002472  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||| ||||||||||||||||| |||||||||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  24002473 aaactgttttacaaatcaaacactggacaactagagttgttctgtactgtccttcattttttagcaaatcaaacgcaccc 24002552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 23521914 - 23522096
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| |||    
T  23521914 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctatcccttgcttccagtttgtcctgtacctg 23522013  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacccaaa 183  Q
    |||||||||||||||||||||| |||||||||||||||||| | |  ||||||||||||||||||||||||||||||||||||    
T  23522014 aaacagttttacaaatcaaacactggacaactagagttgttttgtcctgtccttcattttttagcaaatcaaacgcacccaaa 23522096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 29785589 - 29785409
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||| |||    
T  29785589 gacaacttgtacgtgggacaaaaagctgtgttgtggtttggtgagggacaaaaatatgagtttttgttctgtcccttgtctccagtttgtcctgtacctg 29785490  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcatt-ttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| |||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  29785489 aaacagttttacaaatcaaacactggacaactagagttgttctgtcatgtccttcatttttttagcaaatcaaacgcaccc 29785409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 27 - 181
Target Start/End: Complemental strand, 38486283 - 38486129
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||| ||||||||||||||||||||||||| |||    
T  38486283 tgtgctgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttatcctgtacctgaaacagttttacaaatcaaacactgg 38486184  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccca 181  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  38486183 acaactagagttgttctgtcatgtccttcattttttagcaaatcaaacgcaccca 38486129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 50727965 - 50727786
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||| |||| |||    
T  50727965 gacaacttgtacgtgggacaaaaagttgtgttgtggtttgatgagggacaaaaatatgagtttttgtcctgtcccttgccttcagtttgtcatgtacctg 50727866  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| | |||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  50727865 aaacagttttacaaatcaaacacttgacaactagagttgttctgtcatgtccttcattttttagcaaatcaaacgcaccc 50727786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 50735979 - 50735800
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||| |||| |||    
T  50735979 gacaacttgtacgtgggacaaaaagttgtgttgtggtttgatgagggacaaaaatatgagtttttgtcctgtcccttgccttcagtttgtcatgtacctg 50735880  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| | |||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  50735879 aaacagttttacaaatcaaacacttgacaactagagttgttctgtcatgtccttcattttttagcaaatcaaacgcaccc 50735800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 38812554 - 38812731
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  38812554 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctg 38812653  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    |||||||||||||||||||||| |||||||||||||||||| | |  ||||||| |||||||||||||| ||||||||    
T  38812654 aaacagttttacaaatcaaacactggacaactagagttgttatgtcctgtcctttattttttagcaaatgaaacgcac 38812731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 12600920 - 12601100
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||| |||       |||||||||||||| ||||||||||||||||||||||||||| ||||||||  ||| ||||||||||||| |||    
T  12600920 gacaacttgtacgtgagacaaaaagttgtgttgtggtttgatgagggacaaaaatatgagtttttgtcttgtcccttatctccagtttgtcctgtacctg 12601019  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccca 181  Q
    |||| ||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  12601020 aaactgttttacaaatcaaacactggacaactagagttgttctgtcatgtccttcattttttagcaaatcaaacgcaccca 12601100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 30 - 180
Target Start/End: Original strand, 29616228 - 29616379
Alignment:
Q  30 gttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagct-gaaacagttttacaaatcaaacattggac 128  Q
    |||||| | |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||| |||||    
T  29616228 gttgtgctgtggtcagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtaccttgaaacagttttacaaatcaaacactggac 29616327  T
Q  129 aactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29616328 aactagagttgttctatcatgtccttcattttttagcaaatcaaacgcaccc 29616379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 33177084 - 33176904
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||| ||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  33177084 gacaacttgtgcgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctg 33176985  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccca 181  Q
    |||||||||||||||||||||| |||||||||| | ||||||| | || ||||| |||||||||||||||||||| |||||    
T  33176984 aaacagttttacaaatcaaacactggacaactaaaattgttctgtcatatcctttattttttagcaaatcaaacgtaccca 33176904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 27 - 182
Target Start/End: Complemental strand, 46680536 - 46680381
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||     
T  46680536 tgtgctgtggtttggtaagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactga 46680437  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacccaa 182  Q
    ||||||||| ||||||| |  |||||||||||||||||||||||||||||||||||    
T  46680436 acaactagaattgttctgtcctgtccttcattttttagcaaatcaaacgcacccaa 46680381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 52319357 - 52319541
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||    
T  52319357 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttcgtcctgtcccttgcctccagtttgtcctgtacctg 52319456  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctatt-----atgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||      |||||||||||||||| ||||||||||||||||    
T  52319457 aaacagttttacaaatcaaacattggacaactagagttgttctgttctgtcctgtccttcattttttaacaaatcaaacgcaccc 52319541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 36885992 - 36886145
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||| |||    
T  36885992 tgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaacactgg 36886091  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||||||| | |  ||||||| |||||||||||||||||||||||||    
T  36886092 acaactagagttgttttgtcttgtcctttattttttagcaaatcaaacgcaccc 36886145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 27 - 175
Target Start/End: Complemental strand, 2725159 - 2725011
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||| |||||||||||||||||| |||    
T  2725159 tgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctaaaagagttttacaaatcaaacactgg 2725060  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacg 175  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||||    
T  2725059 acaactagagttgttctgtcctgtccttcattttttagcaaatcaaacg 2725011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 1231345 - 1231525
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| |||||||| ||||||||||||||||||||||||||||| ||| |||||||| ||||| ||||||| |||    
T  1231345 gacaacttgtacgtgggacaaaaagttgtgctgtggttttgtgagggacaaaaatatgagtttttgtccagtctcttgcctccagtttatcctgtacctg 1231444  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccca 181  Q
    |||||||||||||||||||||| |||||||||||||||||||| |  | ||||||||||||||||||||||||||||||||    
T  1231445 aaacagttttacaaatcaaacactggacaactagagttgttctgtcctatccttcattttttagcaaatcaaacgcaccca 1231525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 56154655 - 56154839
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||| |||    
T  56154655 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgttctgtcccttgcctccagtttttcctgtacctg 56154754  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacccaaatt 185  Q
    |||||||||||||||||||||| |||||||||| ||||||||| |  |  |||||||||||||||||||||||||||||| ||||    
T  56154755 aaacagttttacaaatcaaacactggacaactaaagttgttctgtcctaaccttcattttttagcaaatcaaacgcaccctaatt 56154839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 34 - 180
Target Start/End: Complemental strand, 2629970 - 2629824
Alignment:
Q  34 tggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaacta 133  Q
    |||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||    
T  2629970 tggtctggtgagggacaaaaatatgagtttttgtcatgtcctttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaacacgggacaacta 2629871  T
Q  134 gagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||| | | ||||||||||||||||||||||||||||||||||    
T  2629870 gagttgttatgtcatgtccttcattttttagcaaatcaaacgcaccc 2629824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 52949754 - 52949933
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||| |||||||||||||||| ||||||||||||||| |||||||| ||||||||||||| |||    
T  52949754 gacaacttgtacgtgggacaaaaagttgtgttgtggtttgctgagggacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctg 52949853  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||| ||||| |||||||||||||||||| | |  |||||||||||||||| ||||||||||||||||    
T  52949854 aaacagttttacaaatgaaacactggacaactagagttgttttgtcgtgtccttcattttttaacaaatcaaacgcaccc 52949933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 36497277 - 36497430
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||| ||||||||||||||||||||||||| |||    
T  36497277 tgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtctcttgtctccagtttgtcctgtacctgaaacagttttacaaatcaaacactgg 36497376  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||||||| | |  | |||||||||||||||||||||||||||||||    
T  36497377 acaactagagttgttttgtcctatccttcattttttagcaaatcaaacgcaccc 36497430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 2 - 180
Target Start/End: Complemental strand, 44324393 - 44324215
Alignment:
Q  2 acaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctga 101  Q
    ||||||||||||||||||       |||| |||||||||||||||||||||||||| ||||||||||| |||  ||||||||||||||||||||| ||||    
T  44324393 acaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatcagtttttgtcccgtcttttgcctctagtttgtcctgtacctga 44324294  T
Q  102 aacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||||||||||||| || |||||| |||||||||| | |||||||||||||| |||||||||||||||||||    
T  44324293 aacagttttacaaatcaaacactgaacaactggagttgttctgtcatgtccttcattttctagcaaatcaaacgcaccc 44324215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 50186588 - 50186741
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| | || ||||| |||||||||||||||| ||     
T  50186588 tgtgttgtggtttggtgagggacaaaaatatgagtttttatcccgtcccttgcctctagtttgtcctgcacctaaaacaattttacaaatcaaacactga 50186687  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  50186688 acaactagagttgttctttcttgtccttcattttttagcaaatcaaacgcaccc 50186741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 20802583 - 20802406
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||    
T  20802583 gacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtctcttgcctccagtttgtcctgtacctg 20802484  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    |||||||||||||||||||||| |||| ||||| ||||||||| |  | |||||||||||||| ||||||||||||||    
T  20802483 aaacagttttacaaatcaaacactggataactaaagttgttctgtcctatccttcattttttaacaaatcaaacgcac 20802406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 9512392 - 9512216
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||| |||||||||||||||||||||||||||  |||||||| ||||| || |||| |||    
T  9512392 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgaaggacaaaaatatgagtttttgtcctgttacttgcctccagtttatcttgtacctg 9512293  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgca 177  Q
    |||||||||||||||||||||| || ||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  9512292 aaacagttttacaaatcaaacactgaacaactagagttgttctatcatgtccttcgttttttagcaaatcaaacgca 9512216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 44649216 - 44649036
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||| ||||||       |||||||||||||| |||||||||||||||| ||||||||||||||| |||||||| ||||||||||||| |||    
T  44649216 gacaacttgtacatgggacaaaaagttgtgttgtggtttgctgagggacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctg 44649117  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccca 181  Q
    |||||||||||||||||||| | |||| |||| |||||||||| |  ||||||||||||||||||||||||||||||||||    
T  44649116 aaacagttttacaaatcaaaaactggataactggagttgttctgtcctgtccttcattttttagcaaatcaaacgcaccca 44649036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 49152152 - 49151976
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||| |||| |||    
T  49152152 gacaacttgtacgtgggataaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcgtgtcccttgcatccagtttgtcttgtacctg 49152053  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgca 177  Q
    |||||||||||||||| ||||| |||| ||||| ||||||||| || ||||||||||||||||||||||||||||||    
T  49152052 aaacagttttacaaattaaacactggataactaaagttgttctgttctgtccttcattttttagcaaatcaaacgca 49151976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 33552894 - 33552715
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||||||||||||||||||||||||||| |||||||||| || | ||||||||||| |||    
T  33552894 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcttgtcccttgcatccaatttgtcctgtacctg 33552795  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| || ||||||||||||||| | |  ||||||| |||||||||||||||||||||||||    
T  33552794 aaacagttttacaaatcaaacactgaacaactagagttgttttgtcctgtcctttattttttagcaaatcaaacgcaccc 33552715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 55065385 - 55065207
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttg-cctctagtttgtcctgtagct 99  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||| ||    
T  55065385 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgccctccagtttgtcttgtacct 55065286  T
Q  100 gaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacc 179  Q
    ||||||||||||||||||||||| || | ||||||||||||||| | |||||||| |||||||||||||| |||||||||    
T  55065285 gaaacagttttacaaatcaaacactgaataactagagttgttctgtcatgtcctt-attttttagcaaattaaacgcacc 55065207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 11056102 - 11056255
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||||||||||||||| |||||||||||||| |||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||    
T  11056102 tgtgttgtggtttggtaagggacaaaaatatcagtttttgtcttgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactgg 11056201  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||  ||||||| |||  || ||||||||||||||||||||||||||||||    
T  11056202 acaactgaagttgttttatcctgaccttcattttttagcaaatcaaacgcaccc 11056255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 6776612 - 6776789
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||| ||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| || || ||     
T  6776612 gacaacttttacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgtgctataccta 6776711  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    || || |||||||||||||||| |||||||||||||||||||| |  |||||||||||||||||||||||||||||||    
T  6776712 aatcaattttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaacgcac 6776789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 32181297 - 32181473
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||    
T  32181297 gacaacttgtacgtgggacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcatctagtttgtcctgtacttg 32181396  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgca 177  Q
    |||||||||||||||||||||| |||||||||| ||||||  | |  | ||||||||||||||||||||||||||||    
T  32181397 aaacagttttacaaatcaaacactggacaactaaagttgtcatgtcctatccttcattttttagcaaatcaaacgca 32181473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 27 - 178
Target Start/End: Original strand, 42870031 - 42870182
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||| | |||||||||||||||||||||||  ||    
T  42870031 tgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtctcttgcccccagtttgtcctgtaccagaaacagttttacaaatcaaacaccgg 42870130  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    ||||||||||||||| | | ||||||||||||| ||||||||||||||||||    
T  42870131 acaactagagttgttatgtcatgtccttcatttcttagcaaatcaaacgcac 42870182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 36743740 - 36743562
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||| |||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||| |||    
T  36743740 gacaacttgtacgtgggacaaaaagttgtgctgtagtttggtgagggacaaaaatatgaatttttgtcatgtcccttgcctccagtttgtcctgtacctg 36743641  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||| ||||||| || ||||||||||||||| | |||| |||||||| ||||||||||||||||||||||    
T  36743640 aaacagttttacaattcaaacactgaacaactagagttgttttgttatatccttcat-ttttagcaaatcaaacgcaccc 36743562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 27 - 181
Target Start/End: Complemental strand, 50178518 - 50178364
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| ||||||||| ||||| |||||||||| ||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||| |||    
T  50178518 tgtgctgtggtttgctgaggcacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactgg 50178419  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccca 181  Q
    ||||||  ||||||||| |  ||||||||||||||||||||||||||||||||||    
T  50178418 acaactgaagttgttctgtcctgtccttcattttttagcaaatcaaacgcaccca 50178364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 21580086 - 21580238
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||| | |||    
T  21580086 tgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgtcctgtacctgaaacagttttacaaatcaaatactgg 21580185  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||| |||| ||||||| |  ||||||| |||||||||||||||||||||||||    
T  21580186 acaattagaattgttctgtcctgtcctt-attttttagcaaatcaaacgcaccc 21580238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 32 - 177
Target Start/End: Original strand, 41711912 - 41712057
Alignment:
Q  32 tgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaac 131  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  41711912 tgtggtttggtgagggacaaaaatatgagtctttgtcctgtcccttgccttcagtttgtcctgtacctgaaacagctttacaaatcaaacactggacaac 41712011  T
Q  132 tagagttgttctattatgtccttcattttttagcaaatcaaacgca 177  Q
    |||||||||||| || | || |||||||||||| ||||||||||||    
T  41712012 tagagttgttctgttctatcattcattttttagtaaatcaaacgca 41712057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 30 - 174
Target Start/End: Original strand, 20694434 - 20694578
Alignment:
Q  30 gttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggaca 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||| || |||||||||||||||| ||||| ||||||    
T  20694434 gttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcctttgccttcagtttgtcctgtacctaaaacagttttacaaattaaacactggaca 20694533  T
Q  130 actagagttgttctattatgtccttcattttttagcaaatcaaac 174  Q
    |||||||||||||| |  ||||||||| |||||||||||||||||    
T  20694534 actagagttgttctgtgttgtccttcagtttttagcaaatcaaac 20694578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 27 - 178
Target Start/End: Original strand, 2787024 - 2787175
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| |||||||| |||| |||||||||||||||||||||||||||||||||| || ||||||| ||||| |||||||| |||||||||||||||| | |    
T  2787024 tgtgatgtggtttagtgaaggacaaaaatatgagtttttgtcctgtcccttgcatccagtttgtactgtacctgaaacaattttacaaatcaaacactag 2787123  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    ||||||||||||||| | | ||||||||||||||||||||||||||||||||    
T  2787124 acaactagagttgttatgtcatgtccttcattttttagcaaatcaaacgcac 2787175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 27 - 178
Target Start/End: Complemental strand, 6973939 - 6973788
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||  |||||||  |||||||| ||| ||||||||||||||||||||||||| |||    
T  6973939 tgtgttgtggtttggcgagggacaaaattatgagtttttgtcctgtcaattgcctcccgtttgtccagtacctgaaacagttttacaaatcaaacactgg 6973840  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    ||||| | |||||||||||  |||||||||||||||||||||||||||||||    
T  6973839 acaacaaaagttgttctatcctgtccttcattttttagcaaatcaaacgcac 6973788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 20518074 - 20517894
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       | || |||| ||||||||||||||||||||||| ||||||||||||| |||||||| |||||||| |||| |||    
T  20518074 gacaacttgtacgtgggacaagaagttatgctgtgatttggtgagggacaaaaatatgactttttgtcctgtctcttgcctccagtttgtcttgtacctg 20517975  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcatt-ttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| || ||||||||||||||||| |  ||||||||||| ||||||||||||||||||||||    
T  20517974 aaacagttttacaaatcaaacactgaacaactagagttgttctgtcctgtccttcatttttttagcaaatcaaacgcaccc 20517894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 34 - 177
Target Start/End: Original strand, 54543056 - 54543198
Alignment:
Q  34 tggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaacta 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||  ||||| |||||||||||||||||| || |||||||    
T  54543056 tggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgtcctgtacttgaaatagttttacaaatcaaacactgaacaacta 54543155  T
Q  134 gagttgttctattatgtccttcattttttagcaaatcaaacgca 177  Q
    |||||||||| | |||| ||||||||||||||||||||||||||    
T  54543156 gagttgttctgtcatgt-cttcattttttagcaaatcaaacgca 54543198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 3649670 - 3649849
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| |||||||||||||||||||||||| | |||||||||||||||||||||||  ||||||| ||||  |||    
T  3649670 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaattttagtttttgtcctgtcccttgccttcagtttgttctgtccctg 3649769  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| | ||||||| |||||||||| |  |||||||||||||||| ||||||||||||||||    
T  3649770 aaacagttttacaaatcaaacactagacaactggagttgttctgtcttgtccttcattttttaacaaatcaaacgcaccc 3649849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 21202773 - 21202915
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||| ||     
T  21202773 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaattatgagtttttgtcctgtctcttgcctccagtttgtcctgtacctt 21202872  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttct 143  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  21202873 aaacagttttacaaatcaaacactggacaactagagttgttct 21202915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 27 - 179
Target Start/End: Complemental strand, 47361439 - 47361287
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||  |||||||||||| ||||||||||||||||||||||||| |||    
T  47361439 tgtgttgtggtttggtgagggacaaaaatatgaatttt-gtcttgtcccttgcctccggtttgtcctgtacctgaaacagttttacaaatcaaacactgg 47361341  T
Q  127 acaactagagttgttctattatgtccttcatt-ttttagcaaatcaaacgcacc 179  Q
    ||||||| ||||||||| |  ||||||||||| |||||||||||||||||||||    
T  47361340 acaactaaagttgttctgtcctgtccttcatttttttagcaaatcaaacgcacc 47361287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 4325825 - 4326002
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       ||||||| ||||| ||||| ||||||||||||||||||| |||||||||||||||| |||||||| |||| |||    
T  4325825 gacaacttgtacgtgggacaaaaagttgtgttgcggttttgtgagagacaaaaatatgagtttttctcctgtcccttgcctccagtttgtcatgtacctg 4325924  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    |||||||||||||||||||||| || ||||||||||||||| | |  ||| ||| |||||||||||||||||||||||    
T  4325925 aaacagttttacaaatcaaacactgaacaactagagttgttttgtcttgtactttattttttagcaaatcaaacgcac 4326002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 55593919 - 55594096
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||||||        |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| || |||| |||    
T  55593919 gacaacttgtacgtgggataaaaagttgtgctgtggtttggtgagggactaaaatatgagtttttgtcctgtcccttgcctccagtttatcatgtacctg 55594018  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttca-ttttttagcaaatcaaacgca 177  Q
    |||||||||||||||||||| | |||||||||||||||||||| |  ||| ||||| |||||||||||||||||||||    
T  55594019 aaacagttttacaaatcaaatactggacaactagagttgttctgtcctgttcttcatttttttagcaaatcaaacgca 55594096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 24210353 - 24210525
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||||||        |||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||    
T  24210353 gacaacttgtacgtgggataaaaagttgtgctgtggtttggtgagggacaataatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctg 24210452  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaa 173  Q
    ||||||||||||||||||||||  |||||| |||||||||||  |  | || |||||||||||||||||||||    
T  24210453 aaacagttttacaaatcaaacaccggacaattagagttgttccgtcctatctttcattttttagcaaatcaaa 24210525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 27 - 178
Target Start/End: Original strand, 29592955 - 29593106
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| |||||||| |||| | ||||||||||||||||||||| |||||||||| || ||||||||||||| ||||||||||||||||||||||||| |||    
T  29592955 tgtgctgtggtttagtgaagtacaaaaatatgagtttttgtcatgtcccttgcatccagtttgtcctgtacctgaaacagttttacaaatcaaacactgg 29593054  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    ||||||  || |||||| |  |||||||||||||||||||||||||||||||    
T  29593055 acaactgaaggtgttctgtcctgtccttcattttttagcaaatcaaacgcac 29593106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 27 - 174
Target Start/End: Original strand, 39078721 - 39078868
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    ||||||||||||||||||||||||||||| | || ||||||||| || |||||||| ||||||| ||||  ||||||||||||||||||||||||| |||    
T  39078721 tgtgttgtggtttggtgagggacaaaaatttcaggttttgtcctatctcttgcctccagtttgttctgtccctgaaacagttttacaaatcaaacactgg 39078820  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaac 174  Q
    |||||| |||||||||| | ||||||||||||||||| ||||||||||    
T  39078821 acaactggagttgttctgtcatgtccttcattttttaacaaatcaaac 39078868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 45 - 177
Target Start/End: Original strand, 14296645 - 14296777
Alignment:
Q  45 gggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaactagagttgttcta 144  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||| |||||||||||||||| ||||||| |||||||||| |     
T  14296645 gggacaaaaatatgagtttttgtcctgtcccttgcctcaagtttgtcctatacctgaaacaattttacaaatcaaacactggacaattagagttgttatg 14296744  T
Q  145 ttatgtccttcattttttagcaaatcaaacgca 177  Q
    |  ||||||| ||||||||||||||||||||||    
T  14296745 tcctgtcctttattttttagcaaatcaaacgca 14296777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 45 - 177
Target Start/End: Original strand, 14314893 - 14315025
Alignment:
Q  45 gggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaactagagttgttcta 144  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||| |||||||||||||||| ||||||| |||||||||| |     
T  14314893 gggacaaaaatatgagtttttgtcctgtcccttgcctcaagtttgtcctatacctgaaacaattttacaaatcaaacactggacaattagagttgttatg 14314992  T
Q  145 ttatgtccttcattttttagcaaatcaaacgca 177  Q
    |  ||||||| ||||||||||||||||||||||    
T  14314993 tcctgtcctttattttttagcaaatcaaacgca 14315025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 37865787 - 37865947
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||| ||||||       ||||||||| |||||||||||||||||||||||||||||||| |||| |||||||| || ||||| |||| |||    
T  37865787 gacaacttgtacatgggacaaaaagttgtgttgtgatttggtgagggacaaaaatatgagtttttgtcatgtctcttgcctccagattgtcatgtacctg 37865886  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttt 161  Q
    |||||||||||||||||||||| |||||||||||||||||| | |  ||||||||||||||    
T  37865887 aaacagttttacaaatcaaacactggacaactagagttgttatgtcgtgtccttcattttt 37865947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 50729594 - 50729415
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||| |||       |||| |||||||||||||  ||||||||| | |||||||||| ||||||||||||| ||||||| ||||  |||    
T  50729594 gacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgatagacaaaaatttcagtttttgtcatgtcccttgcctccagtttgttctgtccctg 50729495  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| |||||||||  ||||||||| |  |||||||||||||||| ||||||||||||||||    
T  50729494 aaacagttttacaaatcaaacactggacaactgaagttgttctgtcttgtccttcattttttaacaaatcaaacgcaccc 50729415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 16320579 - 16320731
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||| |||| || |||| |||||||||||||||||| | |||    
T  16320579 tgtgttgtggtttggtgagggacaaaaatatcagtttttatcctgtcccttgcctccagtttttcctatacctgagacagttttacaaatcaaatactgg 16320678  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||| |||||||||| |   |||||| ||||||||||| |||||||||||||    
T  16320679 acaactggagttgttctgtccagtcctt-attttttagcatatcaaacgcaccc 16320731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 32 - 180
Target Start/End: Original strand, 9807221 - 9807368
Alignment:
Q  32 tgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaac 131  Q
    ||||||||||||||| |||||||  |||||||||||||||||| |||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||||    
T  9807221 tgtggtttggtgagg-acaaaaagttgagtttttgtcctgtccattgcatctagtttgtcttgtacctgaaacagttttacaaatcaaacactggacaac 9807319  T
Q  132 tagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |  |||||| || |  | |||||||| ||||||||||||||||||||||    
T  9807320 tgaagttgtcctgtcctatccttcatgttttagcaaatcaaacgcaccc 9807368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 27 - 143
Target Start/End: Original strand, 34929975 - 34930091
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| | ||||| ||||||||||||||||||||||||| |||    
T  34929975 tgtgctgtggtttggtgaggaacaaaaatatgagtttttgtcctgtcccttgcctccagtttattctgtatctgaaacagttttacaaatcaaacactgg 34930074  T
Q  127 acaactagagttgttct 143  Q
    |||| ||||||| ||||    
T  34930075 acaattagagttattct 34930091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 27 - 179
Target Start/End: Original strand, 42772848 - 42773000
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||| |||||||| |||||||| |||| |||||||| |||||||||||||||| | |    
T  42772848 tgtgttgtggtttggtgaaggacaaaaatatgagtttttgtcttgtctcttgcctcaagtttgtcatgtacctgaaacaattttacaaatcaaacacttg 42772947  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacc 179  Q
    | ||||| ||||||| | | ||||| |||||||||||   |||||||||||||    
T  42772948 aaaactaaagttgttatgtcatgtcattcattttttaatgaatcaaacgcacc 42773000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 47 - 178
Target Start/End: Complemental strand, 56487288 - 56487162
Alignment:
Q  47 gacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaactagagttgttctatt 146  Q
    ||||||||||| | |||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||     ||||||||||||||||| |     
T  56487288 gacaaaaatataaatttttgtcctgtcccttgcctcaagtttgtcctatatctgaaacagttttacaaatcaaac-----acaactagagttgttctgtc 56487194  T
Q  147 atgtccttcattttttagcaaatcaaacgcac 178  Q
    ||||| ||||||||||||||||||||||||||    
T  56487193 atgtctttcattttttagcaaatcaaacgcac 56487162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 22318410 - 22318257
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    ||||||||||||||||||||||||||||| | |  |||||||||||| |||||||  ||||||| ||||  || |||||||||||||||||||||| | |    
T  22318410 tgtgttgtggtttggtgagggacaaaaatttcaaattttgtcctgtctcttgccttcagtttgttctgtccctaaaacagttttacaaatcaaacactag 22318311  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||| || | |||||||| | ||||||||||||||||| ||||||||||||||||    
T  22318310 acagctggggttgttctgtcatgtccttcattttttaacaaatcaaacgcaccc 22318257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 28115286 - 28115462
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||| |||||||       ||||||||||||||||||||||||||||||| | ||||| |||||||||||||||| |||||||| |||| |      
T  28115286 gacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcaatttttctcctgtcccttgcctccagtttgtcttgta-cca 28115384  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    |||||||||||||||||||||| | ||||||| ||||||||||    | | |||||||||||||||||||||| ||||    
T  28115385 aaacagttttacaaatcaaacactagacaacttgagttgttctgccctttgcttcattttttagcaaatcaaatgcac 28115462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 47642543 - 47642388
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||| |||||||||||||||| ||||||| || |||| ||| |||| ||||||||||||  |||    
T  47642543 gacaacttgtacgtgggacaaaaagttgtgttgtggtttgctgagggacaaaaatatcagtttttatcttgtctcttacctccagtttgtcctgtgcctg 47642444  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttca 156  Q
    |||||||||||||||||||||| || |||||| |||||||||| |  |||||||||    
T  47642443 aaacagttttacaaatcaaacactgaacaactggagttgttctgtcctgtccttca 47642388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 180
Target Start/End: Original strand, 26083404 - 26083550
Alignment:
Q  32 tgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaac 131  Q
    |||||||||||||||||||||||| | |||||||||| ||||||||||||| ||||||| ||||  |||||||| |||||||||||||||| |  |||||    
T  26083404 tgtggtttggtgagggacaaaaatttcagtttttgtcatgtcccttgcctccagtttgttctgtccctgaaacaattttacaaatcaaacactaaacaac 26083503  T
Q  132 tagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |  ||||||||| |  ||||||||||||| || ||||| ||||||||||    
T  26083504 tgaagttgttctgt--tgtccttcattttctaacaaattaaacgcaccc 26083550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 34 - 178
Target Start/End: Complemental strand, 25978630 - 25978487
Alignment:
Q  34 tggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaacta 133  Q
    |||||||||||||||||||||| | |||||||||||||| | ||||||| | |||||| |||  ||||||||||||||||||||||||| |||| || |     
T  25978630 tggtttggtgagggacaaaaatttcagtttttgtcctgttcattgcctccaatttgtcatgtc-ctgaaacagttttacaaatcaaacactggataattg 25978532  T
Q  134 gagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
     ||||||| | | |||||||| |||||||| ||||||||||||||    
T  25978531 aagttgttttgtcatgtcctttattttttaacaaatcaaacgcac 25978487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 27 - 178
Target Start/End: Complemental strand, 53200669 - 53200518
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||| |||||||||||||||||||||||| | |||||||||| ||| ||||||||| ||||| ||||||  ||||||||||||| ||||||||||| |      
T  53200669 tgtgctgtggtttggtgagggacaaaaatttcagtttttgtcatgttccttgcctccagtttatcctgtctctgaaacagttttgcaaatcaaacactaa 53200570  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    ||| ||  |||| || | |  |||||||||||||||| ||||||||||||||    
T  53200569 acagctgaagttattatgtcttgtccttcattttttaacaaatcaaacgcac 53200518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 86 - 178
Target Start/End: Original strand, 23328015 - 23328107
Alignment:
Q  86 tttgtcctgtagctgaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    ||||||||||| ||||||||||||||||| |||||||   |||||||||||||||||| | || |||||||||||||||||||||||||||||    
T  23328015 tttgtcctgtacctgaaacagttttacaagtcaaacacatgacaactagagttgttctgtcatatccttcattttttagcaaatcaaacgcac 23328107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 7555009 - 7554830
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||| |||       |||||| |||||| |||| ||||||||||| |||||||| || |||| ||||| |  |||||||  ||||  ||    
T  7555009 gacaacttgtacgtgagacaaaaagttgtgttatggtttagtgaaggacaaaaatacgagtttttatcatgtctcttgcattcagtttgttttgtacatg 7554910  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| |||||| ||  | ||||||| | || || |||| |||||||||||||||||||||||    
T  7554909 aaacagttttacaaatcaaacactggacagctgaaattgttctgtcatatctttcactttttagcaaatcaaacgcaccc 7554830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 179
Target Start/End: Original strand, 30942848 - 30943000
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagttttt-gtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattg 125  Q
    ||||||||||||||||||| |||| |||| | ||||||| |||| ||| |||||||| | ||||| ||||  |||||||||||||| |||||||||| ||    
T  30942848 tgtgttgtggtttggtgagagacagaaatttcagttttttgtcccgtctcttgcctccaatttgttctgtccctgaaacagttttataaatcaaacactg 30942947  T
Q  126 gacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacc 179  Q
     | |||| |||||||||| |  | ||||| |||||||| |||||||||| ||||    
T  30942948 aataactggagttgttctgtcttatcctt-attttttaacaaatcaaacacacc 30943000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 37695593 - 37695472
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||| ||||||||||||       |||||||||||||| |||||||||||||||| |||||||||| |||| ||| |||| | ||| || |||| |||    
T  37695593 gacaacctgtacgtgggacaaaaagttgtgttgtggtttgatgagggacaaaaatatcagtttttgtcttgtctcttacctccaatttatcatgtacctg 37695494  T
Q  101 aaacagttttacaaatcaaaca 122  Q
    |||||||||| ||||| |||||    
T  37695493 aaacagttttccaaataaaaca 37695472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 43641133 - 43641205
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtc 73  Q
    |||||||||||||||||||       |||| ||||||||||||||||||||||||||||||||||||||||||    
T  43641133 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtc 43641205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 181
Target Start/End: Complemental strand, 44355880 - 44355727
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||||||||||||  |||||||||||||| | | |||||||||| || ||| |||| |||||||||| |  || |||||| |||||||||||||||        
T  44355880 tgtgttgtggtttaatgagggacaaaaatttcaatttttgtcctctctcttacctccagtttgtcctatccctaaaacag-tttacaaatcaaacaccac 44355782  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccca 181  Q
    ||||||||| ||||  ||| || |||||||||||||| || ||||||| ||||||    
T  44355781 acaactagatttgtcatatcatatccttcattttttaacatatcaaacacaccca 44355727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 9947994 - 9948086
Alignment:
Q  32 tgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacatt 124  Q
    |||||||| |||||||| || ||| | |||||||||| |||| |||||||| |||||||| |||  || ||||||||||||||||||||||||    
T  9947994 tgtggtttagtgagggataagaattttagtttttgtcatgtctcttgcctcaagtttgtcatgttccttaaacagttttacaaatcaaacatt 9948086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 124 - 183
Target Start/End: Original strand, 2114193 - 2114252
Alignment:
Q  124 tggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacccaaa 183  Q
    ||||||||| |||||||||| | |||||||||||||||||||||||||||| ||||||||    
T  2114193 tggacaactggagttgttctgtcatgtccttcattttttagcaaatcaaacacacccaaa 2114252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 23327979 - 23328024
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgt 72  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  23327979 tgtgttgtggtttgctgagggacaaaaatatgagtttttgtcctgt 23328024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 61 - 178
Target Start/End: Original strand, 44640417 - 44640533
Alignment:
Q  61 tttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcatttt 160  Q
    |||||||| |||| ||||||||||||||||| | |  |  |||||||||||||||||||||| || ||||||  |||||||||  | |||| ||||||||    
T  44640417 tttttgtcttgtctcttgcctctagtttgtcattttccataaacagttttacaaatcaaacactgtacaactgaagttgttct-gtctgtcattcatttt 44640515  T
Q  161 ttagcaaatcaaacgcac 178  Q
    |||| | |||||||||||    
T  44640516 ttagtagatcaaacgcac 44640533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 7001912 - 7001976
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtc 91  Q
    ||||||||||||||||||||||||||||| |  |||||||| ||||| |||||||| ||||||||    
T  7001912 tgtgttgtggtttggtgagggacaaaaatttttgtttttgttctgtctcttgcctcgagtttgtc 7001976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 13110443 - 13110519
Alignment:
Q  104 cagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    ||||||||||||||||||| |||||||||  | || |||| | ||||| |||||||||||||||||||||| |||||    
T  13110443 cagttttacaaatcaaacactggacaactgaaatttttctgtcatgtctttcattttttagcaaatcaaacacaccc 13110519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 37931980 - 37932020
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgt 67  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  37931980 tgtgttgtggtttggtgagggacaaaaatatgagtttttgt 37932020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 173
Target Start/End: Original strand, 43739572 - 43739644
Alignment:
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaa 173  Q
    ||||||||||||||||||||||||  ||||||  ||||||  ||| | |||||||||||||||||||||||||    
T  43739572 aaacagttttacaaatcaaacattttacaactgaagttgtcttatcacgtccttcattttttagcaaatcaaa 43739644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 43739495 - 43739570
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtccct 76  Q
    ||||||||||| |||||||       ||||||||||||||||||||||||| ||| | |||||||||| |||||||    
T  43739495 gacaacttgtatgtgggacaaaatgttgtgttgtggtttggtgagggacaataatttcagtttttgtcatgtccct 43739570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 3579219 - 3579338
Alignment:
Q  61 tttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcatttt 160  Q
    |||||||| ||||||||||||| |||||||||||   || |||||| ||||| |||||||| ||| |||| |  ||||||  | |||  || |||  |||    
T  3579219 tttttgtcatgtcccttgcctcaagtttgtcctgcccctaaaacagatttacgaatcaaacgttgtacaattgaagttgtcatgttacatcattcggttt 3579318  T
Q  161 ttagcaaatcaaacgcaccc 180  Q
    |||||||||||||| |||||    
T  3579319 ttagcaaatcaaacacaccc 3579338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 31445830 - 31445768
Alignment:
Q  101 aaacagttttacaaatcaaa--cattggacaactagagttgttctattatgtccttcattttt 161  Q
    ||||||||||||||||||||  ||||| ||||||||||||||  | | |||||||||||||||    
T  31445830 aaacagttttacaaatcaaagacattgtacaactagagttgtcatgtcatgtccttcattttt 31445768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 52673871 - 52673934
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgt 90  Q
    ||||||| ||||| ||||||||||||||| |  ||||||||| ||||||||| ||| |||||||    
T  52673871 tgtgttgaggtttagtgagggacaaaaatttctgtttttgtcatgtcccttgactccagtttgt 52673934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 181
Target Start/End: Original strand, 38520597 - 38520641
Alignment:
Q  138 tgttctattatgtccttcatt-ttttagcaaatcaaacgcaccca 181  Q
    |||||| | |||||||||||| |||||||||||||||||||||||    
T  38520597 tgttctgtcatgtccttcattcttttagcaaatcaaacgcaccca 38520641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 44365992 - 44365940
Alignment:
Q  111 acaaatcaaacattggacaactagagttgttctattatgtccttcatttttta 163  Q
    |||||||| |||||| |||||| |||||||||| | |||| ||||||||||||    
T  44365992 acaaatcagacattgtacaacttgagttgttctgtcatgtacttcatttttta 44365940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 51518493 - 51518529
Alignment:
Q  87 ttgtcctgtagctgaaacagttttacaaatcaaacat 123  Q
    |||||||||| | ||||||||||||||||||||||||    
T  51518493 ttgtcctgtatcagaaacagttttacaaatcaaacat 51518529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 119; Significance: 8e-61; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 23606 - 23785
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||    
T  23606 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgaaggacaaaaatatgagtttttgtcatgtcccttgcctcaagtttgtcctgtacctg 23705  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| |||||||||||||||||||| |  || ||||||||||||||||||||||||||||||    
T  23706 aaacagttttacaaatcaaacactggacaactagagttgttctgtcctgcccttcattttttagcaaatcaaacgcaccc 23785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 2403 - 2225
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||    
T  2403 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgtcctgtacctg 2304  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| | || ||||| |||||||||||  |||||||||||||||||||||||||||||||||    
T  2303 aaacagttttacaaatcaaacact-gaaaactaaagttgttctatcctgtccttcattttttagcaaatcaaacgcaccc 2225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 15203 - 15382
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    ||||||||||||||| |||       ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||    
T  15203 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgggggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcctgtacctg 15302  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    |||||||||||||||||||||| ||||||| |||||||||| | |  |||||||||||||||||||||||||||||||||    
T  15303 aaacagttttacaaatcaaacactggacaattagagttgttttgtcttgtccttcattttttagcaaatcaaacgcaccc 15382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 101980 - 102158
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||| |  ||||||||||  ||    
T  101980 gacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcatgtccgttgcctccaagttgtcctgtacatg 102079  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacc 179  Q
    |||||||||||||||||||||| |||| ||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  102080 aaacagttttacaaatcaaacactggataactagagttgttctgtcatgtccttcattttttagcaaatcaaacgcacc 102158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 4644 - 4467
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||| ||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| || || ||     
T  4644 gacaacttttacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgtgctataccta 4545  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcac 178  Q
    || || |||||||||||||||| |||||||||||||||||||| |  |||||||||||||||||||||||||||||||    
T  4544 aatcaattttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaacgcac 4467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 15446 - 15260
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgt--------cccttgcctctagtttgtcc 92  Q
    |||||||||||| ||||||       |||||||||||||||||||||||||||||||||||||||||| |||        |||||||||| ||||| |||    
T  15446 gacaacttgtacatgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcatgtgatcttgtcccttgcctccagtttatcc 15347  T
Q  93 tgtagctgaaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacc 179  Q
    |||| ||||||||||||||||||||||||| || ||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  15346 tgtacctgaaacagttttacaaatcaaacactgaacaactagagttgttctatcatgttcttcattttttagcaaatcaaacgcacc 15260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 51470 - 51650
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| ||||||||| ||||||||||||||||||||||||||| |||||||||| || ||||||| ||| | |||    
T  51470 gacaacttgtacgtgggacaaaaagttgtgctgtggtttg-tgagggacaaaaatatgagtttttgtcttgtcccttgcatccagtttgttctgcacctg 51568  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacccaa 182  Q
    |||||||||||||||||||||| ||||||| || ||||||||| || |||||||||||||||| ||||||||||||||||||    
T  51569 aaacagttttacaaatcaaacactggacaattaaagttgttctgttttgtccttcattttttatcaaatcaaacgcacccaa 51650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 27 - 173
Target Start/End: Complemental strand, 5479 - 5332
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagttttt-gtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattg 125  Q
    |||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||| ||    
T  5479 tgtgatgtggtttggtgagggacaaaaatatgtgttttttgtcctgtcccttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaacactg 5380  T
Q  126 gacaactagagttgttctattatgtccttcattttttagcaaatcaaa 173  Q
    |||||||  ||||||||| || ||||||||||||||||||||||||||    
T  5379 gacaactgaagttgttctgttctgtccttcattttttagcaaatcaaa 5332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 27 - 179
Target Start/End: Complemental strand, 2535 - 2383
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||| |||| | |||||| |||| ||||||||||||||||||||||||| ||     
T  2535 tgtgttgtggtttggttagggacaaagatatgagtttttgtcctgtccctttcctccaatttgtcttgtacctgaaacagttttacaaatcaaacactga 2436  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaacgcacc 179  Q
    ||||||||||||||| | |  ||||||||| ||||||||||||||||||||||    
T  2435 acaactagagttgttatgtcttgtccttcaatttttagcaaatcaaacgcacc 2383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 18119 - 17982
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||| |||    
T  18119 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgtcatgtacctg 18020  T
Q  101 aaacagttttacaaatcaaacattggacaactagagtt 138  Q
    |||||||||||||||||||||| |||||||||||||||    
T  18019 aaacagttttacaaatcaaacactggacaactagagtt 17982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 12601 - 12527
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtccc 75  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12601 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtccc 12527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 1708 - 1532
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||| | |||||||||| ||||||||||||| |||||||||| |   ||    
T  1708 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagtttttgtcttgtcccttgcctccagtttgtcctatccttg 1609  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgca 177  Q
    |||||||||||||||||||||| |||| ||||  ||||||||| || |||||||||||||||| |||||||||||||    
T  1608 aaacagttttacaaatcaaacactggagaactgaagttgttctgttttgtccttcattttttaacaaatcaaacgca 1532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 32 - 183
Target Start/End: Complemental strand, 13721 - 13570
Alignment:
Q  32 tgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattggacaac 131  Q
    |||||||||||||||||||||||| | |||||||||||| ||||||||||| ||||||| ||||  |||||||| |||||||||||||||| ||||||||    
T  13721 tgtggtttggtgagggacaaaaatttcagtttttgtcctatcccttgcctccagtttgttctgtccctgaaacaattttacaaatcaaacactggacaac 13622  T
Q  132 tagagttgttctattatgtccttcattttttagcaaatcaaacgcacccaaa 183  Q
    | |||||||||| |  |||||||||||||||| |||||||||||||||||||    
T  13621 tggagttgttctgtcctgtccttcattttttaacaaatcaaacgcacccaaa 13570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 373029 - 372856
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||||| ||||||||||||||||||||||||||||||||||| | ||||||| ||| ||||| | ||||| |||    
T  373029 gacaacttgtacgtgggacaaaaagttgtgttatggtttggtgagggacaaaaatatgagtttttgtcatatcccttgtctccagttttttctgtacctg 372930  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaac 174  Q
    |||||||||||||||||||||||| |||||||| | ||||||| | || |||||||||||||||||||| ||||    
T  372929 aaacagttttacaaatcaaacatttgacaactaaaattgttctgtcatatccttcattttttagcaaataaaac 372856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 19155 - 18978
Alignment:
Q  1 gacaacttgtacgtgggacnnnnnnntgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctg 100  Q
    |||||||||||||||||||       |||| |||| |||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||| |||    
T  19155 gacaacttgtacgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaatatgagtttt-gtcctgtctcttgcctccagtttgtcctgtacctg 19057  T
Q  101 aaacagttttacaaatcaaacattggacaactagagttgttctattatgtccttcattttttagcaaatcaaacgcaccc 180  Q
    || ||||||||||||||||||| ||||||| || | ||||||| |  |||||||||||||||||||||| ||| ||||||    
T  19056 aa-cagttttacaaatcaaacactggacaaatataattgttctgtcctgtccttcattttttagcaaattaaaggcaccc 18978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 27 - 174
Target Start/End: Complemental strand, 42989 - 42843
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    |||||||||||||||||||||||| |||| | ||||||||| |||||||||||||| ||||||| ||||  ||||||||||||||||||||||||| |||    
T  42989 tgtgttgtggtttggtgagggacacaaatttcagtttttgttctgtcccttgcctccagtttgttctgtccctgaaacagttttacaaatcaaacactgg 42890  T
Q  127 acaactagagttgttctattatgtccttcattttttagcaaatcaaac 174  Q
    || | | |||||||||| |  | |||||||||||||| ||||||||||    
T  42889 acta-tggagttgttctgtcttatccttcattttttaacaaatcaaac 42843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 27 - 183
Target Start/End: Complemental strand, 19195 - 19038
Alignment:
Q  27 tgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaacattgg 126  Q
    ||||||| | |||| |||||||||||||| | |||||||||||||||| |||||||  |||| | ||||  ||||||||||||||||||||||||| |||    
T  19195 tgtgttgagctttgatgagggacaaaaatttcagtttttgtcctgtccattgcctcctgtttattctgtccctgaaacagttttacaaatcaaacactgg 19096  T
Q  127 acaactagagttgttctattatgtccttca-ttttttagcaaatcaaacgcacccaaa 183  Q
    | |||| || ||||| | |  | ||||||| ||||||| |||||||||||||||||||    
T  19095 ataactggaattgttatgtcctatccttcatttttttaacaaatcaaacgcacccaaa 19038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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