View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18399_high_5 (Length: 304)
Name: NF18399_high_5
Description: NF18399
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18399_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 18 - 292
Target Start/End: Complemental strand, 24570627 - 24570353
Alignment:
| Q |
18 |
atggacatcattattctatgattaataatattgttttcaaatctgttcaacttaatttctattttcggaagaaggtgccaattatgactcatgagcattt |
117 |
Q |
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| T |
24570627 |
atggacatcattattctatgattaataatattgttttcaaatctgttcaacttaatttctattttcggaagaaggtgccaattatgactcatgagcattt |
24570528 |
T |
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| Q |
118 |
agtggactggttcttaactcaatccacctatattagttaattttcttnnnnnnntatgaaaagttagtatagttattttctaaatttaaattgatgtttg |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24570527 |
agtggactggttcttaactcaatccacctatattagttaattttcttaaaaaaatatgaaaagttagtatagttattttctaaatttaaattgatgtttg |
24570428 |
T |
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| Q |
218 |
gtgagaatattaatgactatgacatgttgctattggccataatgagcctctcttccccttccatattttgtttct |
292 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24570427 |
gtgagaatattaatgactatgacatgttgctattggccataatgagcctctcttccccttccatattttgtttct |
24570353 |
T |
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