View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18400_high_21 (Length: 286)

Name: NF18400_high_21
Description: NF18400
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18400_high_21
NF18400_high_21
[»] chr4 (53 HSPs)
chr4 (54-286)||(27411458-27411690)
chr4 (28-286)||(27571503-27571761)
chr4 (28-286)||(27419073-27419331)
chr4 (47-286)||(27421933-27422176)
chr4 (42-283)||(27414309-27414550)
chr4 (47-286)||(27567154-27567393)
chr4 (47-283)||(27424519-27424755)
chr4 (125-283)||(27556384-27556542)
chr4 (126-286)||(27478885-27479045)
chr4 (126-286)||(27485945-27486105)
chr4 (174-286)||(27506724-27506836)
chr4 (173-286)||(27412689-27412802)
chr4 (175-286)||(27444796-27444907)
chr4 (190-286)||(27563348-27563444)
chr4 (175-286)||(27431150-27431261)
chr4 (132-286)||(27486967-27487121)
chr4 (132-286)||(27513778-27513932)
chr4 (177-286)||(27585717-27585826)
chr4 (197-286)||(27595434-27595523)
chr4 (175-283)||(27557516-27557624)
chr4 (130-286)||(27559242-27559398)
chr4 (132-286)||(27526114-27526268)
chr4 (174-286)||(27425838-27425950)
chr4 (167-286)||(27501336-27501455)
chr4 (132-286)||(27479885-27480039)
chr4 (132-286)||(27505704-27505858)
chr4 (126-268)||(27527139-27527281)
chr4 (190-286)||(27503964-27504060)
chr4 (203-286)||(27554364-27554447)
chr4 (132-286)||(27476671-27476825)
chr4 (132-286)||(27498399-27498553)
chr4 (177-286)||(27415650-27415759)
chr4 (190-283)||(27524566-27524659)
chr4 (190-286)||(27468329-27468425)
chr4 (190-286)||(27475581-27475677)
chr4 (192-284)||(27490004-27490096)
chr4 (190-286)||(27514933-27515029)
chr4 (125-286)||(27446124-27446285)
chr4 (190-286)||(27420450-27420546)
chr4 (126-286)||(27497324-27497484)
chr4 (174-286)||(27502809-27502921)
chr4 (190-286)||(27570051-27570147)
chr4 (192-286)||(17970343-17970437)
chr4 (240-286)||(27507815-27507861)
chr4 (237-286)||(27600642-27600691)
chr4 (190-286)||(27423264-27423360)
chr4 (192-283)||(27508896-27508987)
chr4 (244-286)||(27460574-27460616)
chr4 (244-286)||(27466917-27466959)
chr4 (132-286)||(27469444-27469598)
chr4 (244-286)||(27473988-27474030)
chr4 (232-286)||(27495620-27495674)
chr4 (237-283)||(27577407-27577453)
[»] chr5 (3 HSPs)
chr5 (132-286)||(1756759-1756913)
chr5 (132-286)||(1754243-1754397)
chr5 (117-283)||(1756000-1756166)
[»] chr3 (16 HSPs)
chr3 (132-286)||(55084770-55084924)
chr3 (126-283)||(38032260-38032417)
chr3 (126-283)||(38035033-38035190)
chr3 (126-283)||(38038525-38038682)
chr3 (126-283)||(50913474-50913631)
chr3 (126-283)||(38027433-38027590)
chr3 (174-286)||(38043929-38044041)
chr3 (132-286)||(38024877-38025031)
chr3 (132-286)||(38031329-38031483)
chr3 (192-286)||(50910004-50910098)
chr3 (132-286)||(50911871-50912025)
chr3 (241-286)||(48840714-48840759)
chr3 (230-286)||(38028768-38028824)
chr3 (195-286)||(50904794-50904885)
chr3 (132-286)||(38036795-38036949)
chr3 (230-286)||(38040083-38040139)
[»] chr8 (3 HSPs)
chr8 (126-283)||(21608235-21608392)
chr8 (213-286)||(21634608-21634681)
chr8 (230-286)||(21607298-21607354)
[»] chr2 (1 HSPs)
chr2 (192-286)||(3073613-3073707)


Alignment Details
Target: chr4 (Bit Score: 205; Significance: 1e-112; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 54 - 286
Target Start/End: Complemental strand, 27411690 - 27411458
Alignment:
Q  54 atgggtttccgcatagcaaagcttatcagaatgccatcattttccaaaacacaagaatctaccaagggacttgaagtcccaaaaggctatctcgcagtgt 153  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  27411690 atgggtttccgcatagcaaagcttattagaatgccatcattttccaaaacacaagaatctaccaagggacttgaagtcccaaaaggctatctcgcagtct 27411591  T
Q  154 atgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaatttggata 253  Q
    ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  27411590 atgttggagatagaatgagacggttcgtgattccagtatcatacttgaaccaaccatcgtttcaagaattactaaatcaagcagaagaagaatttggata 27411491  T
Q  254 tgatcatcctatgggtggtctcacaattccttg 286  Q
    |||||||||||||||||||||||||||||||||    
T  27411490 tgatcatcctatgggtggtctcacaattccttg 27411458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 28 - 286
Target Start/End: Original strand, 27571503 - 27571761
Alignment:
Q  28 gtgaggaaccataaataataaaaacaatgggtttccgcatagcaaagcttatcagaatgccatcattttccaaaacacaagaatctaccaagggacttga 127  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||    
T  27571503 gtgaggaaccataaatactaaaaacaatgggtttccgcatagcaaagcttatcagaatgccatcattttccaaaacacaagagactgccaagggacttga 27571602  T
Q  128 agtcccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattacta 227  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||| ||||||| |||| ||| ||||  |||||||||||||||    
T  27571603 agtcccaaaaggctatctcgcagtctatgttggagatagaatgaggcggttcgtgattccagtatcatatttgagccagccatcgtttcaagaattacta 27571702  T
Q  228 aatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27571703 aatcaatcagaagaagaatttggatatgatcatccaatgggtggtctcacaattccttg 27571761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 28 - 286
Target Start/End: Complemental strand, 27419331 - 27419073
Alignment:
Q  28 gtgaggaaccataaataataaaaacaatgggtttccgcatagcaaagcttatcagaatgccatcattttccaaaacacaagaatctaccaagggacttga 127  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||    
T  27419331 gtgaggagccatacataataaaaacaatgggtttccgcatagcaaagcttatcagaatgccatcattttccaaaacacaagagactgccaagggacttga 27419232  T
Q  128 agtcccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattacta 227  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||| ||||||| |||| ||| ||||  |||||||||||||||    
T  27419231 agtcccaaaaggctatctcgcagtctatgttggagatagaatgaggcggttcgtgattccagtatcatatttgagccagccatcgtttcaagaattacta 27419132  T
Q  228 aatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  27419131 aatcaatcagaagaagaatttggatatgatcatccaatgggtggtcttacaattccttg 27419073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 47 - 286
Target Start/End: Complemental strand, 27422176 - 27421933
Alignment:
Q  47 aaaaacaatgggtttccgcatagcaaagcttatcagaatgccatcattttccaaaacacaagaatctaccaagggacttgaagtcccaaaaggctatctc 146  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||| |||| ||||||||||||| |||||||||||||||||||||||    
T  27422176 aaaaacaatgggtttccgcatagcaaaacttatcagaatgccatcattttcctcaacgcaagcatctaccaagggatttgaagtcccaaaaggctatctc 27422077  T
Q  147 gcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaat 246  Q
    ||||| |||||||| |||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27422076 gcagtctatgttggagatagaatgaaacggttcgtgattccagtatcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaat 27421977  T
Q  247 tt----ggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    ||    ||||| |||||||| | |||||||||||||||||||||    
T  27421976 ttggatggatacgatcatccaacgggtggtctcacaattccttg 27421933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 42 - 283
Target Start/End: Complemental strand, 27414550 - 27414309
Alignment:
Q  42 ataataaaaacaatgggtttccgcatagcaaagcttatcagaatgccatcattttccaaaacacaagaatctaccaagggacttgaagtcccaaaaggct 141  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||   |||||||| ||||| ||||||| ||||||| ||||||||||    
T  27414550 ataaaaaaaacaatgggtttccgcatagcaaagcttatcagaaagccatcattttcgtcaacacaagcatctagcaagggatttgaagtgccaaaaggct 27414451  T
Q  142 atctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatcaagcagaaga 241  Q
    |||| ||||| || ||||| |||| |||||||||||||||||||||  ||||||||||||||||||| | |||||||||||||||||||||| |||||||    
T  27414450 atcttgcagtctacgttggagataaaatgagacggtttgtgattcctgtatcatacttgaaccaaccctcatttcaagaattactaaatcaatcagaaga 27414351  T
Q  242 agaatttggatatgatcatcctatgggtggtctcacaattcc 283  Q
    ||||||||||||||||||||| ||||||||||| ||||||||    
T  27414350 agaatttggatatgatcatccaatgggtggtcttacaattcc 27414309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 47 - 286
Target Start/End: Original strand, 27567154 - 27567393
Alignment:
Q  47 aaaaacaatgggtttccgcatagcaaagcttatcagaatgccatcattttccaaaacacaagaatctaccaagggacttgaagtcccaaaaggctatctc 146  Q
    |||||||||||||||||| ||||| |   |||||| || | |||||||||||||||| |||| ||||| ||||||| |||||||||||||||||||||||    
T  27567154 aaaaacaatgggtttccgtatagccagtattatcaaaagggcatcattttccaaaactcaaggatctagcaagggatttgaagtcccaaaaggctatctc 27567253  T
Q  147 gcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaat 246  Q
    ||||| |||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||    
T  27567254 gcagtctatgttggagatagaatgagacggttcgtgattccagtatcatacttgaaccaaccatcgtttcaagaattactaaatcaaacagaagaagaat 27567353  T
Q  247 ttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  27567354 ttggttatgatcatccaatgggtggtctcacaattccttg 27567393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 27424755 - 27424519
Alignment:
Q  47 aaaaacaatgggtttccgcatagcaaagcttatcagaatgccatcattttccaaaacacaagaatctaccaagggacttgaagtcccaaaaggctatctc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||| |||||  || ||| | |||||||||||||||||||||    
T  27424755 aaaaacaatgggtttccgcatagcaaagcttatcagaatgccatcattttcgtcaacacaagcatctagtaaaggattcgaagtcccaaaaggctatctc 27424656  T
Q  147 gcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaat 246  Q
    ||||| |||||||| |||  |||||| ||||||||||||||| ||||||||||||||||||| | |||||||||||| ||||||||| | ||||||||||    
T  27424655 gcagtctatgttggagatcaaatgaggcggtttgtgattccagtatcatacttgaaccaaccttcatttcaagaattgctaaatcaatctgaagaagaat 27424556  T
Q  247 ttggatatgatcatcctatgggtggtctcacaattcc 283  Q
     ||||||||||||||| ||||||||||| || |||||    
T  27424555 atggatatgatcatccaatgggtggtcttaccattcc 27424519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 125 - 283
Target Start/End: Complemental strand, 27556542 - 27556384
Alignment:
Q  125 tgaagtcccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaatta 224  Q
    ||||||||||||||||||||||||||| |||||||| || | |||||  || |||||||||||  | ||||  ||||||||||| | |||||||||||||    
T  27556542 tgaagtcccaaaaggctatctcgcagtttatgttggagaaaaaatgaagcgatttgtgattcccatttcattattgaaccaaccttcatttcaagaatta 27556443  T
Q  225 ctaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattcc 283  Q
    ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27556442 ctacatcaagcagaagaagaatttggatatgatcattctatgggtggtctcacaattcc 27556384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 126 - 286
Target Start/End: Complemental strand, 27479045 - 27478885
Alignment:
Q  126 gaagtcccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattac 225  Q
    ||||| ||||| |||||| | |||||||||||||| || | |  ||  ||||||||  | ||| |||||||||||||||||||||| ||||||||||| |    
T  27479045 gaagttccaaagggctatgttgcagtgtatgttggagagaaacagaagcggtttgttgtcccaatatcatacttgaaccaaccattgtttcaagaattgc 27478946  T
Q  226 taaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    || ||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  27478945 tacatcaagcggaagaagaatttggatatgatcatcccatgggtggcctcaccattccttg 27478885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 126 - 286
Target Start/End: Complemental strand, 27486105 - 27485945
Alignment:
Q  126 gaagtcccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattac 225  Q
    ||||| ||||| |||||| | |||||||||||||| || | |  ||  ||||||||  | ||| |||||||||||||||||||||| ||||||||||| |    
T  27486105 gaagttccaaagggctatgttgcagtgtatgttggagagaaacagaagcggtttgttgtcccaatatcatacttgaaccaaccattgtttcaagaattgc 27486006  T
Q  226 taaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    || ||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  27486005 tacatcaagcggaagaagaatttggatatgatcatcccatgggtggcctcaccattccttg 27485945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 174 - 286
Target Start/End: Original strand, 27506724 - 27506836
Alignment:
Q  174 cggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtc 273  Q
    ||||||||||| ||| |||||||||| ||||||||||| ||||||||||| ||| ||||||| |||||||||||||||||||||||||| |||||||| |    
T  27506724 cggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagaattgctacatcaagcggaagaagaatttggatatgatcatcccatgggtggac 27506823  T
Q  274 tcacaattccttg 286  Q
    |||| ||||||||    
T  27506824 tcaccattccttg 27506836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 173 - 286
Target Start/End: Original strand, 27412689 - 27412802
Alignment:
Q  173 acggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggt 272  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||| ||| | | |||||| |||||||| ||||||||||||||||| ||||||||     
T  27412689 acggtttgtgatcccaatatcatacttgaaccaaccattatttcaagacttattgagtcaagctgaagaagagtttggatatgatcatccaatgggtggc 27412788  T
Q  273 ctcacaattccttg 286  Q
    ||||| ||||||||    
T  27412789 ctcaccattccttg 27412802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 286
Target Start/End: Complemental strand, 27444907 - 27444796
Alignment:
Q  175 ggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtct 274  Q
    |||||||||| ||| |||||||||||| |||| ||| ||||||||||||| | |||||||| || ||| |||| |||||||| ||||| |||||||||||    
T  27444907 ggtttgtgatcccaatatcatacttgagccaatcatcatttcaagaattattgaatcaagccgaggaacaattcggatatgaccatccaatgggtggtct 27444808  T
Q  275 cacaattccttg 286  Q
    ||||||||||||    
T  27444807 cacaattccttg 27444796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 190 - 286
Target Start/End: Complemental strand, 27563444 - 27563348
Alignment:
Q  190 tatcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    ||||||||||||||||| |||| |||||||| || || | |||||| |||||||| ||||||||||||||||| |||||||| ||||||||||||||    
T  27563444 tatcatacttgaaccaaacattgtttcaagatttgctgagtcaagccgaagaagagtttggatatgatcatccaatgggtggcctcacaattccttg 27563348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 286
Target Start/End: Complemental strand, 27431261 - 27431150
Alignment:
Q  175 ggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtct 274  Q
    |||||||||| ||| ||||||||||||||||||| | ||||||||||||  | |||||||| || ||| ||||||||||||| ||||| |  ||||||||    
T  27431261 ggtttgtgatcccaatatcatacttgaaccaaccgtcatttcaagaattgttgaatcaagccgaggaacaatttggatatgaccatccaaccggtggtct 27431162  T
Q  275 cacaattccttg 286  Q
    ||||||||||||    
T  27431161 cacaattccttg 27431150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 286
Target Start/End: Original strand, 27486967 - 27487121
Alignment:
Q  132 ccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatc 231  Q
    ||||| || ||||| |||||||| || || || | |||||  ||||||||||| || ||||||||||| ||||||||||  |||||||||||  | || |    
T  27486967 ccaaagggatatctagcagtgtacgtaggagagaaaatgaagcggtttgtgatccctttatcatacttaaaccaaccatcgtttcaagaattgttgaacc 27487066  T
Q  232 aagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    |||| |||||| |||||| |||||||||||| ||||||||||| || ||||||||    
T  27487067 aagctgaagaacaatttgaatatgatcatccaatgggtggtcttactattccttg 27487121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 286
Target Start/End: Complemental strand, 27513932 - 27513778
Alignment:
Q  132 ccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatc 231  Q
    |||||||| ||||| ||||||||||| || || | |||||  ||||||||||| ||| ||||||||||||||||| | |  || ||||||||  | || |    
T  27513932 ccaaaaggatatctagcagtgtatgtaggagagaaaatgaagcggtttgtgatcccaatatcatacttgaaccaaacctcgttccaagaattgttgaacc 27513833  T
Q  232 aagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    |||| |||||| ||| || |||||||||||| |||||||||||||| ||||||||    
T  27513832 aagctgaagaacaatatgaatatgatcatccaatgggtggtctcactattccttg 27513778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 177 - 286
Target Start/End: Original strand, 27585717 - 27585826
Alignment:
Q  177 tttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctca 276  Q
    |||||||| ||  |||||||||||||||||||||| |||||||| ||  | | |||||| |||||||| ||||||||||||||||| ||||| |||||||    
T  27585717 tttgtgatccccgtatcatacttgaaccaaccattgtttcaagatttgatgagtcaagccgaagaagagtttggatatgatcatccaatgggaggtctca 27585816  T
Q  277 caattccttg 286  Q
    | ||||||||    
T  27585817 ccattccttg 27585826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 197 - 286
Target Start/End: Original strand, 27595434 - 27595523
Alignment:
Q  197 cttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    |||||||| ||||||||||||||||||||||| |||||||||| |||| |||||||   ||||||| ||||||||||| |||||||||||    
T  27595434 cttgaaccgaccattatttcaagaattactaagtcaagcagaaaaagagtttggattcaatcatcccatgggtggtcttacaattccttg 27595523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 283
Target Start/End: Original strand, 27557516 - 27557624
Alignment:
Q  175 ggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtct 274  Q
    |||||||||| ||| | |||||||| |||||||||| |||||||||||| || |||||||| || ||| |||||| ||||| |||||| |||||||||||    
T  27557516 ggtttgtgatcccaatgtcatacttaaaccaaccatcatttcaagaattgctgaatcaagctgaggaacaatttgaatatgttcatccaatgggtggtct 27557615  T
Q  275 cacaattcc 283  Q
    ||| |||||    
T  27557616 cactattcc 27557624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 286
Target Start/End: Complemental strand, 27559398 - 27559242
Alignment:
Q  130 tcccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaa 229  Q
    |||||||||||||||||||||| |||||||| || | |||||   | ||| |||||||  | ||||  ||||| ||| | | ||||||| | ||| |||     
T  27559398 tcccaaaaggctatctcgcagtttatgttggagacaaaatgaagagatttctgattcctatttcattattgaatcaatcttcatttcaatagttattaag 27559299  T
Q  230 tcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
     ||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  27559298 ccaatcagaagaagagtttggatatgatcatccaatgggtggtctcacaattccttg 27559242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 132 - 286
Target Start/End: Complemental strand, 27526268 - 27526114
Alignment:
Q  132 ccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatc 231  Q
    ||||| || ||||| |||||||||||||| || | |||||  ||||||||||||||  ||||||||||||||||| | | ||| ||||||||  | |  |    
T  27526268 ccaaagggatatctagcagtgtatgttggagagaaaatgaagcggtttgtgattcctgtatcatacttgaaccaaacctcattccaagaattgttgagcc 27526169  T
Q  232 aagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    |||| || ||| |||||| |||||||||||| | |||||||||||| ||||||||    
T  27526168 aagctgaggaacaatttgaatatgatcatccaacgggtggtctcactattccttg 27526114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 174 - 286
Target Start/End: Original strand, 27425838 - 27425950
Alignment:
Q  174 cggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtc 273  Q
    |||| |||||| ||| ||||||||||||||||||||| ||||||||| ||| | | ||||   || ||||| ||||||||||||||||| |||||||| |    
T  27425838 cggtatgtgatcccaatatcatacttgaaccaaccatcatttcaagacttattgagtcaatttgaggaagagtttggatatgatcatcccatgggtggcc 27425937  T
Q  274 tcacaattccttg 286  Q
    |||| ||||||||    
T  27425938 tcaccattccttg 27425950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 27501336 - 27501455
Alignment:
Q  167 aatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatg 266  Q
    ||||| |||||||||||| ||| |||||||||| ||||||||||| |||||||| ||  | || ||||| || ||| |||||| ||| |||||||| | |    
T  27501336 aatgaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacg 27501435  T
Q  267 ggtggtctcacaattccttg 286  Q
    ||||||||||| ||||||||    
T  27501436 ggtggtctcactattccttg 27501455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 132 - 286
Target Start/End: Original strand, 27479885 - 27480039
Alignment:
Q  132 ccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatc 231  Q
    |||||||||||||| ||||| || || || || | |||||  || |||||||||||  ||||||||||||||||| ||| ||| ||| | ||  | || |    
T  27479885 ccaaaaggctatctagcagtatacgtaggagagaaaatgaagcgttttgtgattcctgtatcatacttgaaccaaacatcattccaaaagttgttgaacc 27479984  T
Q  232 aagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    |||| || ||| |||||| |||||||||||| |||||||||||||| ||||||||    
T  27479985 aagctgaggaacaatttgaatatgatcatccaatgggtggtctcaccattccttg 27480039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 132 - 286
Target Start/End: Complemental strand, 27505858 - 27505704
Alignment:
Q  132 ccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatc 231  Q
    ||||| || ||||| |||||||| || || || | |||||  ||||||||||||||  ||||||||||||||||| | | ||| ||||||||  | || |    
T  27505858 ccaaaggggtatctagcagtgtacgtaggagagaaaatgaagcggtttgtgattcctgtatcatacttgaaccaaacctcattccaagaattgttgaacc 27505759  T
Q  232 aagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    |||| || ||| |||||| |||||| ||||| |||||||||||||| ||||||||    
T  27505758 aagctgaggaacaatttgaatatgaccatccaatgggtggtctcactattccttg 27505704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 126 - 268
Target Start/End: Original strand, 27527139 - 27527281
Alignment:
Q  126 gaagtcccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattac 225  Q
    ||||| ||||| |||||||| || ||||||||||| |||| |  || |||||||||||| ||| ||||| |||| ||||||||||  |||| ||| || |    
T  27527139 gaagtaccaaagggctatcttgcggtgtatgttggagataaacagaaacggtttgtgatcccaatatcacacttaaaccaaccatcgtttctagagttgc 27527238  T
Q  226 taaatcaagcagaagaagaatttggatatgatcatcctatggg 268  Q
    | | |||||| || ||||| ||||||||||||||||| |||||    
T  27527239 tgagtcaagctgaggaagagtttggatatgatcatcccatggg 27527281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 286
Target Start/End: Original strand, 27503964 - 27504060
Alignment:
Q  190 tatcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    ||||||||||||||||||| | ||||||||| ||  | | |||||| || ||||| ||||||||||||||||| |||||||| ||||| ||||||||    
T  27503964 tatcatacttgaaccaaccttcatttcaagacttgttgagtcaagccgaggaagagtttggatatgatcatccaatgggtggcctcaccattccttg 27504060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 286
Target Start/End: Original strand, 27554364 - 27554447
Alignment:
Q  203 ccaaccattatttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    ||||||||  ||||||||||| || |||||||| || ||| ||||||||||||||||||| | |||| ||||||||||||||||    
T  27554364 ccaaccatcgtttcaagaattgctgaatcaagctgaggaacaatttggatatgatcatccaacgggtagtctcacaattccttg 27554447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 286
Target Start/End: Original strand, 27476671 - 27476825
Alignment:
Q  132 ccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatc 231  Q
    ||||| || ||||| |||||||||||||| || | |||||  ||||||||||||||  ||||||||||||||||| | | ||| |||||| | || |  |    
T  27476671 ccaaagggatatctagcagtgtatgttggtgagaaaatgaagcggtttgtgattcctgtatcatacttgaaccaaacctcattccaagaactgctgagcc 27476770  T
Q  232 aagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    ||   || ||| |||||| |||||||||||| ||||||||||| || ||||||||    
T  27476771 aaagtgaggaacaatttgaatatgatcatccaatgggtggtctaactattccttg 27476825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 286
Target Start/End: Original strand, 27498399 - 27498553
Alignment:
Q  132 ccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatc 231  Q
    ||||| || ||||| ||||| |||||||| ||   ||||| ||| |||||||| ||  |||||||||||||||||||||  || ||||| ||  | || |    
T  27498399 ccaaagggatatctagcagtatatgttggagaggaaatgaaacgttttgtgatccctatatcatacttgaaccaaccatcgttccaagacttgttgaacc 27498498  T
Q  232 aagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    |||| || ||| |||| | |||||||||||| |||||||||||||| ||||||||    
T  27498499 aagccgaggaacaattcgaatatgatcatccaatgggtggtctcactattccttg 27498553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 177 - 286
Target Start/End: Original strand, 27415650 - 27415759
Alignment:
Q  177 tttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctca 276  Q
    |||||||| ||  |||||||||||||||||||||  |||||||| ||  | | |||||| || ||||| ||||||||||||||| | |||||||| ||||    
T  27415650 tttgtgatccccatatcatacttgaaccaaccatcgtttcaagacttgttgagtcaagctgaggaagagtttggatatgatcattccatgggtggcctca 27415749  T
Q  277 caattccttg 286  Q
    | ||||||||    
T  27415750 ccattccttg 27415759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 190 - 283
Target Start/End: Original strand, 27524566 - 27524659
Alignment:
Q  190 tatcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattcc 283  Q
    ||||||| ||||||||||| | ||||||||| ||  | |||||||| || ||||| ||||||||||||||||| |||||||| ||||| |||||    
T  27524566 tatcatatttgaaccaaccttcatttcaagacttgttgaatcaagctgaggaagagtttggatatgatcatccaatgggtggcctcaccattcc 27524659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 286
Target Start/End: Complemental strand, 27468425 - 27468329
Alignment:
Q  190 tatcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    |||||||||| |||||||| | ||||||||| ||  | | |||| | || ||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  27468425 tatcatacttaaaccaaccttcatttcaagacttgttgagtcaatccgaggaagaatttggatatgatcatcccatgggtggcctcaccattccttg 27468329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 286
Target Start/End: Complemental strand, 27475677 - 27475581
Alignment:
Q  190 tatcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    ||||||||||||| ||||| | ||||||||| ||  | | |||||| || ||||| ||||||||||||||||| |||||||| ||||| ||||||||    
T  27475677 tatcatacttgaatcaaccttcatttcaagacttgttgagtcaagccgaggaagagtttggatatgatcatcccatgggtggcctcaccattccttg 27475581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 284
Target Start/End: Original strand, 27490004 - 27490096
Alignment:
Q  192 tcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattcct 284  Q
    |||||||| ||| |||||| ||||||||| ||  | |||||||| || ||||| ||||||||||||||||| |||||||| ||||| ||||||    
T  27490004 tcatacttaaacaaaccatcatttcaagatttgttgaatcaagccgaggaagagtttggatatgatcatccaatgggtggcctcaccattcct 27490096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 286
Target Start/End: Original strand, 27514933 - 27515029
Alignment:
Q  190 tatcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    ||||||||||||| ||||| | ||||||||| ||  | | |||| | || ||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  27514933 tatcatacttgaatcaaccttcatttcaagacttgttgagtcaatccgaggaagaatttggatatgatcatcccatgggtggcctcaccattccttg 27515029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 286
Target Start/End: Original strand, 27446124 - 27446285
Alignment:
Q  125 tgaagtcccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaatta 224  Q
    ||||||||||||||||||||| || || |||||||| || | |||||  || ||||||||||||   ||||  ||||| ||||| | ||||||||| |      
T  27446124 tgaagtcccaaaaggctatcttgcggtttatgttggagaaaaaatgaagcgatttgtgattccaacttcattattgaatcaaccttcatttcaagagtcg 27446223  T
Q  225 ctaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
     |||  ||| |||||||||| |||| |||||||||||  |||| ||||||| | ||||||||    
T  27446224 ttaagccaatcagaagaagagtttgaatatgatcatcgaatggatggtctctcgattccttg 27446285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 190 - 286
Target Start/End: Original strand, 27420450 - 27420546
Alignment:
Q  190 tatcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    |||||||||||| |||||| | ||||||||  || || | |||||  || ||||| ||||||||||||||||| |||||||| ||||| ||||||||    
T  27420450 tatcatacttgagccaaccttcatttcaaggcttgctgagtcaagttgaggaagagtttggatatgatcatcccatgggtggcctcaccattccttg 27420546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 126 - 286
Target Start/End: Complemental strand, 27497484 - 27497324
Alignment:
Q  126 gaagtcccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattac 225  Q
    ||||| ||||| |||||| | |||||||||||||| |||| |   |  ||||||||||| ||  | |||||||| ||||||||||| |||||| | ||      
T  27497484 gaagttccaaagggctatgttgcagtgtatgttggagataaacaaaagcggtttgtgatccctatctcatacttaaaccaaccattgtttcaatatttgt 27497385  T
Q  226 taaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    | | |||||| || ||||| ||||||||||||||||| |  ||||| ||||| ||||||||    
T  27497384 tgagtcaagctgaggaagagtttggatatgatcatcccacaggtggcctcaccattccttg 27497324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 286
Target Start/End: Complemental strand, 27502921 - 27502809
Alignment:
Q  174 cggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtc 273  Q
    ||||||||||||||| | ||||| ||||| ||| | | ||||||||| || || |  ||||| |  ||||||||||||||||| ||||| ||||||||||    
T  27502921 cggtttgtgattccaatgtcatatttgaatcaaacttcatttcaagacttgctgagccaagctgtggaagaatttggatatgaccatccaatgggtggtc 27502822  T
Q  274 tcacaattccttg 286  Q
    | || ||||||||    
T  27502821 ttactattccttg 27502809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 190 - 286
Target Start/End: Complemental strand, 27570147 - 27570051
Alignment:
Q  190 tatcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    |||||||||| | |||||| | ||||||||| || || | |||||| || ||||| || |||||||||||||| |||||||| ||||| ||||||||    
T  27570147 tatcatacttaagccaaccttcatttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcctcaccattccttg 27570051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 286
Target Start/End: Original strand, 17970343 - 17970437
Alignment:
Q  192 tcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    ||||||||||||||| | | ||||||| | || || | ||  ||||| |||||||| ||||| |||||||| |||||||| ||||||||||||||    
T  17970343 tcatacttgaaccaaacttcatttcaatacttgctgagtcgggcagaggaagaattcggatacgatcatccaatgggtggcctcacaattccttg 17970437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 286
Target Start/End: Complemental strand, 27507861 - 27507815
Alignment:
Q  240 gaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    ||||||||||||||||| ||||| ||||||||||| |||||||||||    
T  27507861 gaagaatttggatatgaccatccaatgggtggtcttacaattccttg 27507815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 27600642 - 27600691
Alignment:
Q  237 gaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    |||||||||||||| ||  ||||||| |||||||||||||||||||||||    
T  27600642 gaagaagaatttggttacaatcatccaatgggtggtctcacaattccttg 27600691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 286
Target Start/End: Original strand, 27423264 - 27423360
Alignment:
Q  190 tatcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    ||||||||||||||||||| | ||||||||||||  | | |||||| || ||||| ||||| ||  ||||||| |||||||| |||||  |||||||    
T  27423264 tatcatacttgaaccaaccttcatttcaagaattgttgagtcaagccgaggaagagtttggttacaatcatcccatgggtggcctcaccgttccttg 27423360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 283
Target Start/End: Original strand, 27508896 - 27508987
Alignment:
Q  192 tcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattcc 283  Q
    ||||| ||||||||||| | ||||||||| ||  | ||||| || || ||||| ||||||||||||||||| | |||||| ||||| |||||    
T  27508896 tcatatttgaaccaaccttcatttcaagacttgttgaatcaggctgaggaagagtttggatatgatcatccaacgggtggcctcaccattcc 27508987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 244 - 286
Target Start/End: Original strand, 27460574 - 27460616
Alignment:
Q  244 aatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    |||||| |||||||||||| |||||||||||||| ||||||||    
T  27460574 aatttgaatatgatcatccaatgggtggtctcaccattccttg 27460616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 244 - 286
Target Start/End: Original strand, 27466917 - 27466959
Alignment:
Q  244 aatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    |||||| |||||||||||| |||||||||||||| ||||||||    
T  27466917 aatttgaatatgatcatccaatgggtggtctcactattccttg 27466959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 286
Target Start/End: Original strand, 27469444 - 27469598
Alignment:
Q  132 ccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatc 231  Q
    ||||| || ||||| |||||||| || || || | |||||  ||||||||||| ||  ||||||| ||||| ||| ||| ||| |||||| |  | |  |    
T  27469444 ccaaagggatatctagcagtgtacgtaggagagaaaatgaagcggtttgtgatccctatatcatatttgaagcaaacatcattacaagaactgttgagcc 27469543  T
Q  232 aagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    |||| |||||| |||||| |||||| ||||| ||||||||||| || ||||||||    
T  27469544 aagctgaagaacaatttgaatatgaacatccaatgggtggtctaactattccttg 27469598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 244 - 286
Target Start/End: Original strand, 27473988 - 27474030
Alignment:
Q  244 aatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    |||||| |||||||||||| |||||||||||||| ||||||||    
T  27473988 aatttgaatatgatcatccaatgggtggtctcaccattccttg 27474030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 286
Target Start/End: Original strand, 27495620 - 27495674
Alignment:
Q  232 aagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    |||| |||||||| ||||||| | ||||||| |||||||||||||| ||||||||    
T  27495620 aagctgaagaagagtttggatttaatcatccaatgggtggtctcaccattccttg 27495674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 237 - 283
Target Start/End: Original strand, 27577407 - 27577453
Alignment:
Q  237 gaagaagaatttggatatgatcatcctatgggtggtctcacaattcc 283  Q
    ||||||||||||||||   |||| |||||||||||||||||||||||    
T  27577407 gaagaagaatttggattcaatcaccctatgggtggtctcacaattcc 27577453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 286
Target Start/End: Complemental strand, 1756913 - 1756759
Alignment:
Q  132 ccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatc 231  Q
    ||||| |||||||| |||||| ||||||| || | |  ||  ||||||||||| ||| |||||||||||||||||||||  |||||| | ||  | | ||    
T  1756913 ccaaagggctatcttgcagtgaatgttggagagaaacagaagcggtttgtgatcccaatatcatacttgaaccaaccatcgtttcaatacttgttgagtc 1756814  T
Q  232 aagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    |||| ||||||||||||||||||||||| || |||||||| ||||| ||||||||    
T  1756813 aagctgaagaagaatttggatatgatcaccccatgggtggcctcaccattccttg 1756759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 286
Target Start/End: Complemental strand, 1754397 - 1754243
Alignment:
Q  132 ccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatc 231  Q
    |||||||| ||||| || || |||||||| ||   |||||  ||||||||||| ||  ||||||||||||||||| | | ||||||| |||| |||||      
T  1754397 ccaaaaggatatctagctgtatatgttggagaagaaatgaagcggtttgtgatccccgtatcatacttgaaccaatcgtcatttcaaaaattgctaaaca 1754298  T
Q  232 aagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    || | || ||| | |||| |||||||||||| |||||||||||||| ||||||||    
T  1754297 aatctgaggaacagtttgaatatgatcatccgatgggtggtctcactattccttg 1754243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 283
Target Start/End: Complemental strand, 1756166 - 1756000
Alignment:
Q  117 aagggacttgaagtcccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttc 216  Q
    |||||| ||||||||   |||||||| || ||||| |||||||  ||| ||||||  | | | |||||| || ||||||||||||| ||||| | |||||    
T  1756166 aagggatttgaagtctagaaaggctaccttgcagtctatgttgaagatcgaatgaagcagatagtgatttcaatatcatacttgaatcaaccttaatttc 1756067  T
Q  217 aagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattcc 283  Q
    |||||||||||   |||||||||||  ||||  ||||||||||||| |  | |||||||||||||||    
T  1756066 aagaattactatgccaagcagaagagcaattcagatatgatcatccaactgttggtctcacaattcc 1756000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 3e-20; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 132 - 286
Target Start/End: Original strand, 55084770 - 55084924
Alignment:
Q  132 ccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatc 231  Q
    |||||||| | ||| |||||||||||||| || | |||||  ||||||||||| ||  | || |||||||||||||||| ||||||||| ||  | | ||    
T  55084770 ccaaaagggtgtcttgcagtgtatgttggagagaaaatgaagcggtttgtgatccctatgtcttacttgaaccaaccatcatttcaagacttgttgagtc 55084869  T
Q  232 aagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
      || || |||||||||||||| |||||||| |||||||| ||||||||||||||    
T  55084870 gggcggaggaagaatttggatacgatcatccaatgggtggcctcacaattccttg 55084924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 38032260 - 38032417
Alignment:
Q  126 gaagtcccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattac 225  Q
    ||||| |||||||||||||| |||||||||||||| || | ||||||| ||||| |||||||| |||||| ||||||  | || |||||||||||||| |    
T  38032260 gaagttccaaaaggctatcttgcagtgtatgttggagagaaaatgagaaggtttatgattccagtatcattcttgaatgagcctttatttcaagaattgc 38032359  T
Q  226 taaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattcc 283  Q
    | |  ||| | ||||| ||||| || |||  |||||| ||||| ||||| ||||||||    
T  38032360 ttagccaatctgaagaggaattcggttattgtcatccaatgggcggtcttacaattcc 38032417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 38035033 - 38035190
Alignment:
Q  126 gaagtcccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattac 225  Q
    ||||||||||||||| |||| || ||||||||||| || | |||| || ||||  |||||||| |||||| ||||||  | || |||||||||||||| |    
T  38035033 gaagtcccaaaaggccatcttgcggtgtatgttggagagaaaatgcgaaggttcatgattccaatatcattcttgaatgagcctttatttcaagaattgc 38035132  T
Q  226 taaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattcc 283  Q
    | |  ||||| ||||| ||||| || |||  |||||| ||||||||||||||||||||    
T  38035133 ttagccaagctgaagaggaattcggttattgtcatccaatgggtggtctcacaattcc 38035190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 38038525 - 38038682
Alignment:
Q  126 gaagtcccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattac 225  Q
    ||||||||||||||| |||| |||||||||||||| || | ||||||| ||||  |||||||| |||||| ||||||  | || |||||||||||||| |    
T  38038525 gaagtcccaaaaggccatcttgcagtgtatgttggagagaaaatgagaaggttcatgattccaatatcattcttgaatgagcctttatttcaagaattgc 38038624  T
Q  226 taaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattcc 283  Q
    | |  ||||| ||||| ||||| || |||  |||||| ||||| ||||| ||||||||    
T  38038625 ttagccaagctgaagaggaattcggttattgtcatccaatgggaggtcttacaattcc 38038682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 50913474 - 50913631
Alignment:
Q  126 gaagtcccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattac 225  Q
    |||||||||||||||||||| |||||||||||||| || | |||||   ||||  |||||||| |||||| ||||||  | || |||||||||||||| |    
T  50913474 gaagtcccaaaaggctatcttgcagtgtatgttggagagaaaatgaagaggttcttgattccaatatcattcttgaatgagcctttatttcaagaattgc 50913573  T
Q  226 taaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattcc 283  Q
    | |  ||||| ||||| |||||||| ||   |||||| ||||||||||| ||||||||    
T  50913574 ttagccaagctgaagaggaatttggctactgtcatccaatgggtggtcttacaattcc 50913631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 38027433 - 38027590
Alignment:
Q  126 gaagtcccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattac 225  Q
    ||||| ||||||||| |||| |||||||||||||| || | ||||||| ||||| |||||||  |||||| ||||||  | || |||||||||||||| |    
T  38027433 gaagttccaaaaggccatcttgcagtgtatgttggagagaaaatgagaaggtttatgattcccgtatcattcttgaatgagcctttatttcaagaattgc 38027532  T
Q  226 taaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattcc 283  Q
    | |  ||| | ||||| ||||| || |||  |||||| ||||||||||| ||||||||    
T  38027533 ttagccaatctgaagaggaattcggttattgtcatccaatgggtggtcttacaattcc 38027590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 286
Target Start/End: Original strand, 38043929 - 38044041
Alignment:
Q  174 cggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtc 273  Q
    ||||||||||| ||  | ||||||||||| ||| | |  |||||||| || || | ||||||||| ||||||||||||||||||||||| ||||| || |    
T  38043929 cggtttgtgatccctatgtcatacttgaatcaaacttcgtttcaagacttgctgagtcaagcagaggaagaatttggatatgatcatccaatgggcggcc 38044028  T
Q  274 tcacaattccttg 286  Q
    |||||||||||||    
T  38044029 tcacaattccttg 38044041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 286
Target Start/End: Complemental strand, 38025031 - 38024877
Alignment:
Q  132 ccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatc 231  Q
    ||||| |||||||| ||||| |||||||| ||   |||||  |||||||| || ||  | ||||||||||||||| | |  |||||| | ||| | | ||    
T  38025031 ccaaagggctatcttgcagtatatgttggagagcaaatgaagcggtttgttatccccatgtcatacttgaaccaagcttcctttcaaaacttattgagtc 38024932  T
Q  232 aagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    ||||||| |||||||||||||||||||| || |||||||| ||||| ||||||||    
T  38024931 aagcagaggaagaatttggatatgatcacccaatgggtggcctcacgattccttg 38024877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 286
Target Start/End: Complemental strand, 38031483 - 38031329
Alignment:
Q  132 ccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatc 231  Q
    ||||| |||||||| ||||| |||||||| ||   |||||  |||||||| || ||  | ||||||||||||||| | |  |||||| | ||| | | ||    
T  38031483 ccaaagggctatcttgcagtatatgttggagagcaaatgaagcggtttgttatccccatgtcatacttgaaccaagcttcctttcaaaacttattgagtc 38031384  T
Q  232 aagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    ||||||| |||||||||||||||||||| || |||||||| ||||| ||||||||    
T  38031383 aagcagaggaagaatttggatatgatcacccaatgggtggcctcacgattccttg 38031329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 286
Target Start/End: Original strand, 50910004 - 50910098
Alignment:
Q  192 tcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    ||||||||||||||| | | ||||||| | ||  | |||||||  || ||||||||||||||||||||||| |||||||| ||||||||||||||    
T  50910004 tcatacttgaaccaagcttcatttcaaaacttgttgaatcaagtggaggaagaatttggatatgatcatccaatgggtggcctcacaattccttg 50910098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 286
Target Start/End: Complemental strand, 50912025 - 50911871
Alignment:
Q  132 ccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatc 231  Q
    ||||| |||||||| || || |||||||| || |  |||| |||||||||||| ||    ||||||||||||||| | | ||||||| | ||  | | ||    
T  50912025 ccaaagggctatcttgcggtatatgttggagacaagatgaaacggtttgtgatccccaagtcatacttgaaccaagcttcatttcaaaacttgttgagtc 50911926  T
Q  232 aagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    ||||||| |||||||||||||||||||| || |||||||| || |||||||||||    
T  50911925 aagcagaggaagaatttggatatgatcacccaatgggtggcctaacaattccttg 50911871  T

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Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 286
Target Start/End: Complemental strand, 48840759 - 48840714
Alignment:
Q  241 aagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||    
T  48840759 aagaatttggatatgatcatccaatgggtggcctcacaattccttg 48840714  T

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Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 286
Target Start/End: Complemental strand, 38028824 - 38028768
Alignment:
Q  230 tcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    |||||| || ||||||||||||||||| ||||| ||||| || ||||||||||||||    
T  38028824 tcaagccgaggaagaatttggatatgaccatccaatgggcggcctcacaattccttg 38028768  T

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Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 286
Target Start/End: Complemental strand, 50904885 - 50904794
Alignment:
Q  195 tacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    |||||||||||| | | ||||||||| ||  | | || |||||| || ||||| |||||||||||||| |||||||| ||||| ||||||||    
T  50904885 tacttgaaccaaacttcatttcaagacttgttgagtcgagcagaggatgaattcggatatgatcatccaatgggtggcctcaccattccttg 50904794  T

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Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 286
Target Start/End: Complemental strand, 38036949 - 38036795
Alignment:
Q  132 ccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattactaaatc 231  Q
    ||||| |||||||| |||||||| ||||| ||   ||||| |||||||||  | ||  |  |||||||||||||| | | ||||||| | ||  | | ||    
T  38036949 ccaaagggctatcttgcagtgtacgttggagagcaaatgaaacggtttgttgtccccatgccatacttgaaccaagcttcatttcaaaatttgttgagtc 38036850  T
Q  232 aagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    |||| || |||||||| |||||||| ||||| ||||| || ||||||||||||||    
T  38036849 aagccgaggaagaattcggatatgaccatccaatgggcggcctcacaattccttg 38036795  T

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Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 286
Target Start/End: Complemental strand, 38040139 - 38040083
Alignment:
Q  230 tcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    |||||| || |||||||| |||||||| ||||| ||||| || ||||||||||||||    
T  38040139 tcaagccgaggaagaattcggatatgaccatccaatgggcggcctcacaattccttg 38040083  T

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Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 21608235 - 21608392
Alignment:
Q  126 gaagtcccaaaaggctatctcgcagtgtatgttggcgatagaatgagacggtttgtgattccattatcatacttgaaccaaccattatttcaagaattac 225  Q
    ||||| |||||||||||||| |||||||||||||| || | ||||||| ||||  |||||||| |||||| ||||||  | || |||||||||||||| |    
T  21608235 gaagttccaaaaggctatcttgcagtgtatgttggagagaaaatgagaaggttcatgattccaatatcattcttgaatgagcctttatttcaagaattgc 21608334  T
Q  226 taaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattcc 283  Q
    | |  ||||| ||||| ||||| || |||  |||||| ||||| ||||| ||||||||    
T  21608335 ttagccaagctgaagaggaattcggttattgtcatccaatgggaggtcttacaattcc 21608392  T

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Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 286
Target Start/End: Original strand, 21634608 - 21634681
Alignment:
Q  213 tttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    |||||||| || || | ||||||||| ||||||||||||||||||||||  ||||| ||  |||||||||||||    
T  21634608 tttcaagacttgctgagtcaagcagaggaagaatttggatatgatcatcgaatgggcggcttcacaattccttg 21634681  T

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Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 286
Target Start/End: Complemental strand, 21607354 - 21607298
Alignment:
Q  230 tcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    ||||||||| |||||||||||||||||||| || |||||||| |||||  |||||||    
T  21607354 tcaagcagaggaagaatttggatatgatcacccaatgggtggcctcacggttccttg 21607298  T

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Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 286
Target Start/End: Original strand, 3073613 - 3073707
Alignment:
Q  192 tcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaattccttg 286  Q
    ||||||||||||||| | | ||||||| | || || | ||  ||||| |||||||| ||||| |||||||| |||||||| ||||||||||||||    
T  3073613 tcatacttgaaccaaacttcatttcaatacttgctgagtcgggcagaggaagaattcggatacgatcatccaatgggtggcctcacaattccttg 3073707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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