View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18404_high_104 (Length: 298)

Name: NF18404_high_104
Description: NF18404
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18404_high_104
NF18404_high_104
[»] chr7 (7 HSPs)
chr7 (1-152)||(26153517-26153675)
chr7 (154-281)||(26152151-26152278)
chr7 (106-220)||(29248949-29249063)
chr7 (25-217)||(44225701-44225892)
chr7 (38-217)||(24503753-24503931)
chr7 (148-279)||(12869205-12869334)
chr7 (37-86)||(23943096-23943145)
[»] chr8 (9 HSPs)
chr8 (37-242)||(15893089-15893292)
chr8 (25-225)||(24619165-24619364)
chr8 (106-242)||(30944634-30944769)
chr8 (133-225)||(29671092-29671184)
chr8 (116-225)||(22208811-22208920)
chr8 (29-217)||(5075498-5075685)
chr8 (133-185)||(6662276-6662328)
chr8 (133-185)||(6742678-6742730)
chr8 (25-81)||(29671227-29671283)
[»] chr5 (9 HSPs)
chr5 (25-177)||(33937007-33937158)
chr5 (25-198)||(26506185-26506357)
chr5 (25-249)||(6374562-6374782)
chr5 (25-217)||(17344169-17344360)
chr5 (25-217)||(35049410-35049601)
chr5 (25-217)||(38739806-38739997)
chr5 (25-217)||(20883605-20883796)
chr5 (116-226)||(20159769-20159879)
chr5 (115-227)||(20421329-20421441)
[»] chr3 (3 HSPs)
chr3 (25-221)||(27934058-27934249)
chr3 (102-225)||(30531081-30531204)
chr3 (28-172)||(20514273-20514416)
[»] chr1 (7 HSPs)
chr1 (136-248)||(38810462-38810573)
chr1 (27-85)||(7318385-7318443)
chr1 (25-81)||(25818532-25818588)
chr1 (29-86)||(23943034-23943091)
chr1 (25-81)||(30703688-30703744)
chr1 (25-81)||(12067420-12067476)
chr1 (25-85)||(38810370-38810430)
[»] chr4 (6 HSPs)
chr4 (106-242)||(41784613-41784748)
chr4 (116-226)||(54254158-54254268)
chr4 (133-225)||(21178308-21178400)
chr4 (29-86)||(156735-156792)
chr4 (116-227)||(5317973-5318084)
chr4 (25-79)||(50334706-50334760)
[»] chr2 (9 HSPs)
chr2 (25-170)||(35004139-35004283)
chr2 (25-172)||(26224768-26224914)
chr2 (25-217)||(19379446-19379637)
chr2 (133-225)||(41634286-41634377)
chr2 (133-226)||(19507070-19507164)
chr2 (25-77)||(28758867-28758919)
chr2 (154-226)||(31101119-31101191)
chr2 (149-226)||(8756090-8756167)
chr2 (25-86)||(9827313-9827374)
[»] scaffold0015 (1 HSPs)
scaffold0015 (25-125)||(32931-33030)
[»] chr6 (2 HSPs)
chr6 (115-227)||(8356540-8356652)
chr6 (25-77)||(1031098-1031150)


Alignment Details
Target: chr7 (Bit Score: 99; Significance: 7e-49; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 26153675 - 26153517
Alignment:
Q  1 cataaaatagttgtacaaatatc--------tatgtaatcaatgtcgctatcatcttcgataagttgtggaaaataaacggtcttccaaaagtcaccttc 92  Q
    |||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  26153675 cataaaatagttgtacaaatatcatttctcatatgtaatcaatgtcgctatcatcttcgataagttgtggaaaatatacggtcttccaaaagtcatcttc 26153576  T
Q  93 tctatcatccccccaagtccatgcatgacacatgtactcctacatgagatgttctatgat 152  Q
    | |||| | ||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  26153575 tttatcct-cccccaagtccatgcatgacacatgtactcctacatgagatattctttgat 26153517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 26152278 - 26152151
Alignment:
Q  154 ttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtctagcttgtcggtgggggttaaaaaagactttaattttctttttcacgcggct 253  Q
    |||||||||||||| || |||||| |||| || |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  26152278 ttcaccaatatggaaaaggtatctcttaaattgtgtcttaaactcgtctagcttgtcagtgggggttaaaaaagactttaatcttctttttcacgcggct 26152179  T
Q  254 tatcgaacatgatcctcaactggaacct 281  Q
     || |||||||||| |||||| ||||||    
T  26152178 cattgaacatgatcttcaactcgaacct 26152151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 106 - 220
Target Start/End: Original strand, 29248949 - 29249063
Alignment:
Q  106 caagtccatgcatgacacatgtactcctacatgagatgttctatgatgttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtctagc 205  Q
    ||||||||  |||| ||||| | ||||||||||||||||||| |||| ||||||||||| || ||||||| |||| |||| || ||| |||||||| | |    
T  29248949 caagtccacacatggcacatatgctcctacatgagatgttctttgattttcaccaatatcgacaaagtatttgttgagttgtgccttcaactcgtccaac 29249048  T
Q  206 ttgtcggtgggggtt 220  Q
    |||||| ||||||||    
T  29249049 ttgtcgatgggggtt 29249063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 217
Target Start/End: Complemental strand, 44225892 - 44225701
Alignment:
Q  25 atgtaatcaatgtcgctatcatcttcgataagttgtggaaaataaacggtcttccaaaagtcaccttctctatcatccccccaagtccatgcatgacaca 124  Q
    |||||||||| ||| |||||||||| ||  |||||||||||||| ||||||||||||  |||  ||||  |||| | |||||||||||| || ||  ||     
T  44225892 atgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcttccaacggtcctcttccttatcct-cccccaagtccacgcctggaact 44225794  T
Q  125 tgtactcctacatgagatgttctatgatgttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtctagcttgtcggtgggg 217  Q
    |||||| |||||| | ||||||| |||| |  |||||||||||||||| |   || ||||| || ||| |||||||| | |||||||||||||    
T  44225793 tgtactactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagttttgccttcaactcgtccaacttgtcggtgggg 44225701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 217
Target Start/End: Complemental strand, 24503931 - 24503753
Alignment:
Q  38 cgctatcatcttcgataagttgtggaaaataaacggtcttccaaaagtcaccttctctatcatccccccaagtccatgcatgacacatgtactcctacat 137  Q
    |||||||||||| || ||||||||||||||| |||||||| ||||| ||  ||||  |||| | |||||||||||| || || ||||| ||||  |||||    
T  24503931 cgctatcatctttgagaagttgtggaaaatatacggtctttcaaaattcctcttccttatcct-cccccaagtccacgcttggcacatctactattacat 24503833  T
Q  138 gagatgttctatgatgttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtctagcttgtcggtgggg 217  Q
     | ||||||| |||| |  |||||||||||||||| |   || ||||| | |||| ||| |||| | |||||||||||||    
T  24503832 cacatgttctttgatttgaaccaatatggataaagaagtcgtcaagttttctcttcaacacgtccaacttgtcggtgggg 24503753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 279
Target Start/End: Complemental strand, 12869334 - 12869205
Alignment:
Q  148 atgatgttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtctagcttgtcggtgggggttaaaaaagactttaattttctttttcac 247  Q
    ||||| ||||||| |||||||||| ||||||||||||  |||||| |||||||| |  ||||||||||||  | |||||||  ||||| |||||||||||    
T  12869334 atgattttcaccagtatggataaaatatctgttaagtcgtgtcttcaactcgtcca-tttgtcggtgggg--ttaaaaagagattaatcttctttttcac 12869238  T
Q  248 -gcggcttatcgaacatgatcctcaactggaac 279  Q
     ||| | ||||  |||||| | |||||||||||    
T  12869237 agcgacgtatcagacatgagcttcaactggaac 12869205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 23943145 - 23943096
Alignment:
Q  37 tcgctatcatcttcgataagttgtggaaaataaacggtcttccaaaagtc 86  Q
    ||||||||||||| || |||||||||| |||| ||||||||||| |||||    
T  23943145 tcgctatcatctttgagaagttgtggataatacacggtcttccagaagtc 23943096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 2e-43; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 37 - 242
Target Start/End: Original strand, 15893089 - 15893292
Alignment:
Q  37 tcgctatcatcttcgataagttgtggaaaataaacggtcttccaaaagtcaccttctctatcatccccccaagtccatgcatgacacatgtactcctaca 136  Q
    ||||||||||||| || ||||||||||||||| |||||||||||||||||| ||||  |||| ||||| |||||||| ||||| | ||||||||  ||||    
T  15893089 tcgctatcatctttgacaagttgtggaaaatacacggtcttccaaaagtcatcttccttatcctcccc-caagtccacgcatggcgcatgtactattaca 15893187  T
Q  137 tgagatgttctatgatgttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtctagcttgtcggtgggggttaaaaaagactttaatt 236  Q
    ||||||||||| |||| ||||||| ||||||||||||| | |||||||| || ||| |||||||| | ||||||||||| |||| |||||||| |||||     
T  15893188 tgagatgttctttgattttcaccactatggataaagtagccgttaagttgtgccttcaactcgtccaacttgtcggtggaggtt-aaaaagaccttaatc 15893286  T
Q  237 ttcttt 242  Q
    ||||||    
T  15893287 ttcttt 15893292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 25 - 225
Target Start/End: Original strand, 24619165 - 24619364
Alignment:
Q  25 atgtaatcaatgtcgctatcatcttcgataagttgtggaaaataaacggtcttccaaaagtcaccttctctatcatccccccaagtccatgcatgacaca 124  Q
    |||||||||| ||| |||||||||| || |||||||||| |||| ||| |||| ||||||||  ||||  |||| |||||| |||||||||||||||||     
T  24619165 atgtaatcaacgtcactatcatctttgaaaagttgtggataatacacgatctttcaaaagtcctcttccttatcctccccc-aagtccatgcatgacacc 24619263  T
Q  125 tgtactcctacatgagatgttctatgatgttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtctagcttgtcggtgggggttaaaa 224  Q
    |||||    |||||||||||||| |||| ||||||||||| ||||||||||| ||||| || || ||| |||| ||| | |||||| | |||||||||||    
T  24619264 tgtacaatgacatgagatgttctttgattttcaccaatatcgataaagtatcagttaacttgtgccttcaacttgtccaacttgtcagcgggggttaaaa 24619363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 106 - 242
Target Start/End: Complemental strand, 30944769 - 30944634
Alignment:
Q  106 caagtccatgcatgacacatgtactcctacatgagatgttctatgatgttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtctagc 205  Q
    ||||||||  |||| ||||| | ||||||||||||||||||| |||| ||||||||||| || ||||||| |||| |||| || ||| |||||||| | |    
T  30944769 caagtccacacatggcacatatgctcctacatgagatgttctttgattttcaccaatatcgacaaagtatttgttgagttgtgccttcaactcgtccaac 30944670  T
Q  206 ttgtcggtgggggttaaaaaagactttaattttcttt 242  Q
    |||||| ||||||||| ||||||| ||||| ||||||    
T  30944669 ttgtcgatgggggtta-aaaagaccttaatcttcttt 30944634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 225
Target Start/End: Complemental strand, 29671184 - 29671092
Alignment:
Q  133 tacatgagatgttctatgatgttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtctagcttgtcggtgggggttaaaaa 225  Q
    ||||||||||||||| |||| |||||||||||||| ||||||||| ||||||| || | | |||||||| | |||||| ||||||| ||||||    
T  29671184 tacatgagatgttctttgattttcaccaatatggacaaagtatctattaagttgtgccatcaactcgtccaacttgtcagtggggggtaaaaa 29671092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 225
Target Start/End: Complemental strand, 22208920 - 22208811
Alignment:
Q  116 catgacacatgtactcctacatgagatgttctatgatgttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtctagcttgtcggtgg 215  Q
    ||||||||||||||    |||||||||||||| |||| ||||| || ||||| ||||||| ||||||||| || ||| ||||  || | ||||| |||||    
T  22208920 catgacacatgtacaaacacatgagatgttctttgattttcactaagatggacaaagtatttgttaagttgtgccttcaacttatccaacttgttggtgg 22208821  T
Q  216 gggttaaaaa 225  Q
    ||||||||||    
T  22208820 gggttaaaaa 22208811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 217
Target Start/End: Complemental strand, 5075685 - 5075498
Alignment:
Q  29 aatcaatgtcgctatcatcttcgataagttgtggaaaataaacggtcttccaaaagtcaccttctctatcatccccccaagtccatgcatgacacatgta 128  Q
    |||||| |||||||||||||| || |||||||||| |||| ||||| ||||| |||||| ||||  | || | |||||||||| | || |||||||| ||    
T  5075685 aatcaacgtcgctatcatctttgagaagttgtggataatacacggttttccagaagtcatcttccttctcct-cccccaagtctaggcctgacacattta 5075587  T
Q  129 ctcctacatgagatgttctatgatgttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtctagcttgtcggtgggg 217  Q
    ||   ||| ||  ||||||||||| |  |||||| ||||||||| | |  | ||||| || ||| |||||||| | |||||| ||||||    
T  5075586 ctatgacaagatgtgttctatgatttgaaccaatttggataaagaagccatcaagttttgccttcaactcgtccaacttgtccgtgggg 5075498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 6662276 - 6662328
Alignment:
Q  133 tacatgagatgttctatgatgttcaccaatatggataaagtatctgttaagtt 185  Q
    ||||||||||||  |||||| |||||||| ||||| ||||||| |||||||||    
T  6662276 tacatgagatgtagtatgattttcaccaagatggacaaagtatttgttaagtt 6662328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 6742678 - 6742730
Alignment:
Q  133 tacatgagatgttctatgatgttcaccaatatggataaagtatctgttaagtt 185  Q
    ||||||||||||  |||||| |||||||| ||||| ||||||| |||||||||    
T  6742678 tacatgagatgtagtatgattttcaccaagatggacaaagtatttgttaagtt 6742730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 29671283 - 29671227
Alignment:
Q  25 atgtaatcaatgtcgctatcatcttcgataagttgtggaaaataaacggtcttccaa 81  Q
    |||||||| |||| || |||||| | ||||| |||||||||||| ||||||||||||    
T  29671283 atgtaatcgatgttgccatcatcatggataacttgtggaaaatacacggtcttccaa 29671227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 9e-36; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 25 - 177
Target Start/End: Complemental strand, 33937158 - 33937007
Alignment:
Q  25 atgtaatcaatgtcgctatcatcttcgataagttgtggaaaataaacggtcttccaaaagtcaccttctctatcatccccccaagtccatgcatgacaca 124  Q
    |||||||||||||| ||||||| ||||||||||||||||||||| |  ||||||||||||||  ||||| |||| |||| | ||||||| |  |||||||    
T  33937158 atgtaatcaatgtcactatcattttcgataagttgtggaaaatatatcgtcttccaaaagtcctcttctttatcctccctc-aagtccacgtttgacaca 33937060  T
Q  125 tgtactcctacatgagatgttctatgatgttcaccaatatggataaagtatct 177  Q
    |||||| |||||||||||||||| ||||  |||||||||||||||||||||||    
T  33937059 tgtactactacatgagatgttctttgattgtcaccaatatggataaagtatct 33937007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 198
Target Start/End: Original strand, 26506185 - 26506357
Alignment:
Q  25 atgtaatcaatgtcgctatcatcttcgataagttgtggaaaataaacggtcttccaaaagtcaccttctctatcatccccccaagtccatgcatgacaca 124  Q
    |||||| ||| ||||||||||||||||| ||||||||||||||| |||||||| |||||||   ||||| |||| | ||| ||||||||||| |||||||    
T  26506185 atgtaagcaacgtcgctatcatcttcgacaagttgtggaaaatacacggtctttcaaaagtgctcttctttatcct-ccctcaagtccatgcctgacaca 26506283  T
Q  125 tgtactcctacatgagatgttctatgatgttcaccaatatggataaagtatctgttaagttatgtcttaaactc 198  Q
    | ||||  || || | ||||||| |||| |  |||||||||||||||| |||||| ||||| || ||| |||||    
T  26506284 tttactattatatcacatgttctttgatttgaaccaatatggataaagcatctgtcaagttttgcctttaactc 26506357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 25 - 249
Target Start/End: Complemental strand, 6374782 - 6374562
Alignment:
Q  25 atgtaatcaatgtcgctatcatcttcgataagttgtggaaaataaacggtcttccaaaagtcaccttctctatcatccccccaagtccatgcatgacaca 124  Q
    |||||||||| |||||| ||||||| || |||||||||| |||| ||||||||| |||| ||   |||  |||| |||||| ||||||| |||| ||||     
T  6374782 atgtaatcaacgtcgctgtcatctttgacaagttgtggataatatacggtcttcaaaaaatcctattccttatcctccccc-aagtccacgcataacacc 6374684  T
Q  125 tgtactcctacatgagatgttctatgatgttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtctagcttgtcggtgggggttaaaa 224  Q
    | | ||  |||||||||| |||| |||| ||||  |||||||||||||||| ||||||  | || ||| |||||||| | |||||| ||||||||| |||    
T  6374683 tct-ctgttacatgagatattctttgattttcatgaatatggataaagtatttgttaa-atgtgccttcaactcgtccaacttgtcagtgggggtt-aaa 6374587  T
Q  225 aagactttaattttctttttcacgc 249  Q
    ||||| ||||| |||||| ||||||    
T  6374586 aagaccttaatcttctttctcacgc 6374562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 217
Target Start/End: Complemental strand, 17344360 - 17344169
Alignment:
Q  25 atgtaatcaatgtcgctatcatcttcgataagttgtggaaaataaacggtcttccaaaagtcaccttctctatcatccccccaagtccatgcatgacaca 124  Q
    |||||||||  |||| |||||||||||| ||||||||||||||| |||||||| |||||||   ||||  |||| | |||||||||||| || || || |    
T  17344360 atgtaatcagcgtcggtatcatcttcgacaagttgtggaaaatacacggtctttcaaaagttctcttccttatcct-cccccaagtccacgcttggcata 17344262  T
Q  125 tgtactcctacatgagatgttctatgatgttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtctagcttgtcggtgggg 217  Q
    | ||||  ||||| | ||||||| |||| |  |||||||||||||||| |   || ||||| || ||| |||||||| | ||| |||||||||    
T  17344261 tttactattacatcacatgttctttgatttgaaccaatatggataaagaagtcgtcaagttttgccttcaactcgtccaacttctcggtgggg 17344169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 217
Target Start/End: Original strand, 35049410 - 35049601
Alignment:
Q  25 atgtaatcaatgtcgctatcatcttcgataagttgtggaaaataaacggtcttccaaaagtcaccttctctatcatccccccaagtccatgcatgacaca 124  Q
    |||||||||| ||| |||||||||| ||  ||||||||||||||  |||||||||||  |||  ||||  |||| | ||| |||||||| || ||  ||     
T  35049410 atgtaatcaacgtcactatcatctttgactagttgtggaaaatacgcggtcttccaacggtcctcttccttatcct-cccacaagtccacgcctggaact 35049508  T
Q  125 tgtactcctacatgagatgttctatgatgttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtctagcttgtcggtgggg 217  Q
    |||||| |||||| | ||||||| |||| |  |||||||||||||||| |   || ||||| |||||| |||||||| | |||||||||||||    
T  35049509 tgtactactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagttttgtcttcaactcgtccaacttgtcggtgggg 35049601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 217
Target Start/End: Complemental strand, 38739997 - 38739806
Alignment:
Q  25 atgtaatcaatgtcgctatcatcttcgataagttgtggaaaataaacggtcttccaaaagtcaccttctctatcatccccccaagtccatgcatgacaca 124  Q
    |||||||||| ||| |||||||||| ||  |||||||||||||| ||||||||||||  |||  ||||  |||| | |||||||||||| || ||  ||     
T  38739997 atgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcttccaacggtcctcttccttatcct-cccccaagtccacgcctggaact 38739899  T
Q  125 tgtactcctacatgagatgttctatgatgttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtctagcttgtcggtgggg 217  Q
    |||||| |||||| | ||||||| |||| |  |||||||||||||||| |   || ||||| || ||| |||||||| | |||||| ||||||    
T  38739898 tgtactactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagttttgccttcaactcgtccaacttgtcagtgggg 38739806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 217
Target Start/End: Original strand, 20883605 - 20883796
Alignment:
Q  25 atgtaatcaatgtcgctatcatcttcgataagttgtggaaaataaacggtcttccaaaagtcaccttctctatcatccccccaagtccatgcatgacaca 124  Q
    |||||||||| ||| |||||||||| ||  |||||||||||||| ||||||||||||  |||  ||||  |||| | |||||||||||| || ||| ||     
T  20883605 atgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcttccaacggtcctcttccttatcct-cccccaagtccacgcctgaaact 20883703  T
Q  125 tgtactcctacatgagatgttctatgatgttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtctagcttgtcggtgggg 217  Q
    |||||| |||||| | ||||| | |||| |  |||||||  ||||||| |   || ||||| || ||| |||||||| | |||||||||||||    
T  20883704 tgtactactacataatatgttatgtgatttgaaccaatactgataaagaagtcgtcaagttttgccttcaactcgtccaacttgtcggtgggg 20883796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 226
Target Start/End: Original strand, 20159769 - 20159879
Alignment:
Q  116 catgacacatgtactcctacatgagatgttctatgatgttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtctagcttgtcggtgg 215  Q
    |||||||| |||||   ||||||||||| ||| |||| |||||||| ||||  ||||||||||| ||||| |||||| ||||| || |  ||||  ||||    
T  20159769 catgacacctgtacaaatacatgagatgctctttgattttcaccaagatgggaaaagtatctgtcaagttgtgtcttcaactcatccaatttgttagtgg 20159868  T
Q  216 gggttaaaaaa 226  Q
    |||||||||||    
T  20159869 gggttaaaaaa 20159879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 227
Target Start/End: Complemental strand, 20421441 - 20421329
Alignment:
Q  115 gcatgacacatgtactcctacatgagatgttctatgatgttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtctagcttgtcggtg 214  Q
    ||||||||| |||||   ||||||||||||||| |||| |||||||| ||| | ||||||| || |||||| || ||| ||||| || |  ||||| |||    
T  20421441 gcatgacacttgtacgaatacatgagatgttctttgattttcaccaagatgtacaaagtatttgctaagttgtgccttcaactcatcgaaattgtcagtg 20421342  T
Q  215 ggggttaaaaaag 227  Q
     ||||||||||||    
T  20421341 tgggttaaaaaag 20421329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 221
Target Start/End: Complemental strand, 27934249 - 27934058
Alignment:
Q  25 atgtaatcaatgtcgctatcatcttcgataagttgtggaaaataaacggtcttccaaaagtcaccttctctatcatccccccaagtccatgcatgacaca 124  Q
    |||||| ||| ||||||||||||||||| ||||||||||||||| | |||||||||||||||   |||  ||||     ||||||| || || |||||||    
T  27934249 atgtaagcaacgtcgctatcatcttcgacaagttgtggaaaatatatggtcttccaaaagtccttttccttatc-----cccaagttcacgcctgacaca 27934155  T
Q  125 tgtactcctacatgagatgttctatgatgttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtctagcttgtcggtgggggtta 221  Q
    | |||| |||||| ||||||||| |||| | |||||| |||||||||||||| || ||||| || ||| |||||||| | |||||||||| ||||||    
T  27934154 tttactactacatcagatgttctttgatttgcaccaacatggataaagtatccgtcaagttgtgccttcaactcgtcgaacttgtcggtgagggtta 27934058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 30531204 - 30531081
Alignment:
Q  102 cccccaagtccatgcatgacacatgtactcctacatgagatgttctatgatgttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtc 201  Q
    |||||||||||| ||||| ||| ||||||  ||||||||||||||| |||| |||| ||||||||||||| ||  ||||||||| || ||| ||||| ||    
T  30531204 cccccaagtccacgcatggcacttgtactattacatgagatgttctttgattttcatcaatatggataaaatagttgttaagttgtgccttcaactcatc 30531105  T
Q  202 tagcttgtcggtgggggttaaaaa 225  Q
     | |||||||||||| ||||||||    
T  30531104 caacttgtcggtgggagttaaaaa 30531081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 20514273 - 20514416
Alignment:
Q  28 taatcaatgtcgctatcatcttcgataagttgtggaaaataaacggtcttccaaaagtcaccttctctatcatccccccaagtccatgcatgacacatgt 127  Q
    ||||||| |||||||||||||| ||  |||||||||||| | ||||||||||||  |||  ||||  |||| | |||||||||||| || ||  || |||    
T  20514273 taatcaacgtcgctatcatctttgactagttgtggaaaaaacacggtcttccaacggtcctcttcattatcct-cccccaagtccacgcctggtacttgt 20514371  T
Q  128 actcctacatgagatgttctatgatgttcaccaatatggataaag 172  Q
    ||| |||||| | ||||||| |||| |  ||||||||||||||||    
T  20514372 actactacataatatgttctgtgatttgaaccaatatggataaag 20514416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 3e-26; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 136 - 248
Target Start/End: Original strand, 38810462 - 38810573
Alignment:
Q  136 atgagatgttctatgatgttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtctagcttgtcggtgggggttaaaaaagactttaat 235  Q
    |||||||||||| |||| |||||||||||||||||||||| ||||||||| ||  || |||||||| | |||||||||||||||| |||||||| |||||    
T  38810462 atgagatgttctttgattttcaccaatatggataaagtatatgttaagttgtgctttcaactcgtcaaccttgtcggtgggggtt-aaaaagaccttaat 38810560  T
Q  236 tttctttttcacg 248  Q
     ||||||||||||    
T  38810561 attctttttcacg 38810573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 7318385 - 7318443
Alignment:
Q  27 gtaatcaatgtcgctatcatcttcgataagttgtggaaaataaacggtcttccaaaagt 85  Q
    |||| ||| ||||||||||||||||| ||||||||||||||| || |||||||||||||    
T  7318385 gtaagcaacgtcgctatcatcttcgagaagttgtggaaaatacacagtcttccaaaagt 7318443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 25818588 - 25818532
Alignment:
Q  25 atgtaatcaatgtcgctatcatcttcgataagttgtggaaaataaacggtcttccaa 81  Q
    |||||||||| |||||||||||||| ||  |||||||||||||| ||||||||||||    
T  25818588 atgtaatcaacgtcgctatcatctttgactagttgtggaaaatacacggtcttccaa 25818532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 23943091 - 23943034
Alignment:
Q  29 aatcaatgtcgctatcatcttcgataagttgtggaaaataaacggtcttccaaaagtc 86  Q
    |||||| |||||||||||||| || |||||||||| |||| ||||||||||| |||||    
T  23943091 aatcaacgtcgctatcatctttgagaagttgtggataatacacggtcttccagaagtc 23943034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 30703688 - 30703744
Alignment:
Q  25 atgtaatcaatgtcgctatcatcttcgataagttgtggaaaataaacggtcttccaa 81  Q
    |||||||||| ||| |||||||||| ||  |||||||||||||| ||||||||||||    
T  30703688 atgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcttccaa 30703744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 12067476 - 12067420
Alignment:
Q  25 atgtaatcaatgtcgctatcatcttcgataagttgtggaaaataaacggtcttccaa 81  Q
    |||||||||| ||| |||| ||||| ||  |||||||||||||| ||||||||||||    
T  12067476 atgtaatcaacgtcactattatctttgactagttgtggaaaatacacggtcttccaa 12067420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 38810370 - 38810430
Alignment:
Q  25 atgtaatcaatgtcgctatcatcttcgataagttgtggaaaataaacggtcttccaaaagt 85  Q
    ||||||||||||| |||||| | || |||| ||| ||||||||| ||||||||| ||||||    
T  38810370 atgtaatcaatgttgctatcgtttttgatacgttatggaaaatacacggtcttctaaaagt 38810430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 106 - 242
Target Start/End: Complemental strand, 41784748 - 41784613
Alignment:
Q  106 caagtccatgcatgacacatgtactcctacatgagatgttctatgatgttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtctagc 205  Q
    ||||||||  |||| ||||| | || |||||||||||||||| |||| ||||||||||| || ||||||| |||| |||| || ||| |||||||| | |    
T  41784748 caagtccactcatggcacatatgcttctacatgagatgttctttgattttcaccaatatcgacaaagtatttgttgagttgtgccttcaactcgtccaac 41784649  T
Q  206 ttgtcggtgggggttaaaaaagactttaattttcttt 242  Q
    |||||||||||||||| ||||||| ||||| ||||||    
T  41784648 ttgtcggtgggggtta-aaaagaccttaatcttcttt 41784613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 226
Target Start/End: Complemental strand, 54254268 - 54254158
Alignment:
Q  116 catgacacatgtactcctacatgagatgttctatgatgttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtctagcttgtcggtgg 215  Q
    ||||||||||||||   ||||||||||||| | |||| ||||| || ||||||||| ||| ||||||||| |||||| ||||| |  | || ||||||||    
T  54254268 catgacacatgtacaaatacatgagatgttatttgatcttcactaagatggataaaatatttgttaagttgtgtcttcaactcatgcaactcgtcggtgg 54254169  T
Q  216 gggttaaaaaa 226  Q
    |||||||||||    
T  54254168 gggttaaaaaa 54254158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 133 - 225
Target Start/End: Complemental strand, 21178400 - 21178308
Alignment:
Q  133 tacatgagatgttctatgatgttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtctagcttgtcggtgggggttaaaaa 225  Q
    ||||||||||||||| |||| |||||||| ||||| ||| ||||||||||||| || ||| ||||| || | ||||||| | ||||| |||||    
T  21178400 tacatgagatgttctttgattttcaccaagatggacaaaatatctgttaagttgtgcctttaactcatccaacttgtcgataggggtcaaaaa 21178308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 156735 - 156792
Alignment:
Q  29 aatcaatgtcgctatcatcttcgataagttgtggaaaataaacggtcttccaaaagtc 86  Q
    |||||| |||||||||||||| || |||||||||| |||| ||||||||||| |||||    
T  156735 aatcaacgtcgctatcatctttgagaagttgtggataatacacggtcttccagaagtc 156792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 227
Target Start/End: Complemental strand, 5318084 - 5317973
Alignment:
Q  116 catgacacatgtactcctacatgagatgttctatgatgttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtctagcttgtcggtgg 215  Q
    |||||||| |||||   |||||||||| |||| |||| ||| |||| ||||| ||| ||||||||||||| || ||| ||||| || |  || |||||||    
T  5318084 catgacacttgtacaaatacatgagatattctttgattttcgccaagatggacaaattatctgttaagttgtgccttcaactcatccaaattttcggtgg 5317985  T
Q  216 gggttaaaaaag 227  Q
     |||||||||||    
T  5317984 aggttaaaaaag 5317973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 50334706 - 50334760
Alignment:
Q  25 atgtaatcaatgtcgctatcatcttcgataagttgtggaaaataaacggtcttcc 79  Q
    |||||||||| ||| |||||||||| ||  |||||||||||||| ||||||||||    
T  50334706 atgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcttcc 50334760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 35004283 - 35004139
Alignment:
Q  25 atgtaatcaatgtcgctatcatcttcgataagttgtggaaaataaacggtcttccaaaagtcaccttctctatcatccccccaagtccatgcatgacaca 124  Q
    |||||||||| ||||||||||| || || |||||||| |||||| |||||||||||||||||  ||||  |||| | ||||||||||||  | || |||     
T  35004283 atgtaatcaacgtcgctatcatatttgacaagttgtgaaaaatacacggtcttccaaaagtcttcttccttatcct-cccccaagtccactcctggcact 35004185  T
Q  125 tgtactcctacatgagatgttctatgatgttcaccaatatggataa 170  Q
    |||||| |||||| | |||||||||||| |  | ||||||||||||    
T  35004184 tgtactactacataacatgttctatgatttgaatcaatatggataa 35004139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 172
Target Start/End: Original strand, 26224768 - 26224914
Alignment:
Q  25 atgtaatcaatgtcgctatcatcttcgataagttgtggaaaataaacggtcttccaaaagtcaccttctctatcatccccccaagtccatgcatgacaca 124  Q
    |||||||||| ||| ||||||||||||| ||||| | ||||||| | |||||||||||||||  ||||  |||| | | |||||||||| || |||||||    
T  26224768 atgtaatcaacgtcactatcatcttcgacaagttctagaaaatacaaggtcttccaaaagtcctcttccttatcct-ctcccaagtccacgcctgacaca 26224866  T
Q  125 tgtactcctacatgagatgttctatgatgttcaccaatatggataaag 172  Q
    | ||||   |||| |  ||||||||||| |  ||||||||||||||||    
T  26224867 tttactatcacatcacgtgttctatgatttgaaccaatatggataaag 26224914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 217
Target Start/End: Complemental strand, 19379637 - 19379446
Alignment:
Q  25 atgtaatcaatgtcgctatcatcttcgataagttgtggaaaataaacggtcttccaaaagtcaccttctctatcatccccccaagtccatgcatgacaca 124  Q
    |||||||||| ||| |||||||||| ||  |||||||||||||| ||||||||||||  |||| ||||  |||| | |||||||| ||| || ||  ||     
T  19379637 atgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcttccaacggtcatcttccttatcct-cccccaagcccacgcctggaact 19379539  T
Q  125 tgtactcctacatgagatgttctatgatgttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtctagcttgtcggtgggg 217  Q
    |||||| |||||| | ||||||| |||| |  ||||| |||||||||  |   || ||||| || ||| |||||||| | |||||||||||||    
T  19379538 tgtactactacataatatgttctgtgatttgaaccaacatggataaataagtcgtcaagttttgccttcaactcgtccaacttgtcggtgggg 19379446  T

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Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 133 - 225
Target Start/End: Original strand, 41634286 - 41634377
Alignment:
Q  133 tacatgagatgttctatgatgttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtctagcttgtcggtgggggttaaaaa 225  Q
    ||||||||||||| | | || |||||||| ||||||||||||||| |||| || |||||| ||||| || | ||| |||||||||||||||||    
T  41634286 tacatgagatgtttttt-attttcaccaagatggataaagtatcttttaaattgtgtcttcaactcatccaacttatcggtgggggttaaaaa 41634377  T

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Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 19507164 - 19507070
Alignment:
Q  133 tacatgagatgttctatgatgttc-accaatatggataaagtatctgttaagttatgtcttaaactcgtctagcttgtcggtgggggttaaaaaa 226  Q
    ||||||||||||||| |||| ||| ||||| || || ||| ||||||||||||| || ||| ||||| |  | ||||||||||||||||||||||    
T  19507164 tacatgagatgttctttgattttccaccaagattgacaaaatatctgttaagttgtgccttcaactcattcaacttgtcggtgggggttaaaaaa 19507070  T

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Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 28758919 - 28758867
Alignment:
Q  25 atgtaatcaatgtcgctatcatcttcgataagttgtggaaaataaacggtctt 77  Q
    |||||||||| |||||||||||||| || |||||||||| |||| ||||||||    
T  28758919 atgtaatcaacgtcgctatcatctttgagaagttgtggataatacacggtctt 28758867  T

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Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 31101191 - 31101119
Alignment:
Q  154 ttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtctagcttgtcggtgggggttaaaaaa 226  Q
    ||||| || ||||| ||||||| | ||||||| |||||||||||| || | |||||||| |||||||||||||    
T  31101191 ttcacaaagatggacaaagtatttattaagttgtgtcttaaactcatccaacttgtcggcgggggttaaaaaa 31101119  T

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Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 8756167 - 8756090
Alignment:
Q  149 tgatgttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtctagcttgtcggtgggggttaaaaaa 226  Q
    |||| ||| |||| ||||||||| ||| |||||||||  ||||||||||| || | ||||||| |||||| |||||||    
T  8756167 tgattttctccaagatggataaaatatttgttaagttgcgtcttaaactcttccaacttgtcgatgggggataaaaaa 8756090  T

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Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 9827313 - 9827374
Alignment:
Q  25 atgtaatcaatgtcgctatcatcttcgataagttgtggaaaataaacggtcttccaaaagtc 86  Q
    |||||||||| |||||||||||||| || ||||||| || |||| || |||||||| |||||    
T  9827313 atgtaatcaacgtcgctatcatctttgagaagttgttgataatacacagtcttccagaagtc 9827374  T

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Target: scaffold0015 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 33030 - 32931
Alignment:
Q  25 atgtaatcaatgtcgctatcatcttcgataagttgtggaaaataaacggtcttccaaaagtcaccttctctatcatccccccaagtccatgcatgacaca 124  Q
    |||||||||| ||||||||| |||| || || ||||||| |||| ||||||||||  |||||  ||||  |||| |||||| |||||||||| |||||||    
T  33030 atgtaatcaacgtcgctatcgtctttgaaaaattgtggataatacacggtcttcctgaagtcttcttccttatcctccccc-aagtccatgcctgacaca 32932  T

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Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 227
Target Start/End: Complemental strand, 8356652 - 8356540
Alignment:
Q  115 gcatgacacatgtactcctacatgagatgttctatgatgttcaccaatatggataaagtatctgttaagttatgtcttaaactcgtctagcttgtcggtg 214  Q
    ||||||||| |||||   ||||||||||||| | |||| |||||||| ||| | ||| ||||||||||||| || ||| ||||| |||| | ||| | ||    
T  8356652 gcatgacacctgtacaaatacatgagatgttatttgattttcaccaagatgaacaaaatatctgttaagttgtgccttcaactcatctaacctgttgatg 8356553  T
Q  215 ggggttaaaaaag 227  Q
     ||||||||||||    
T  8356552 agggttaaaaaag 8356540  T

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Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 1031150 - 1031098
Alignment:
Q  25 atgtaatcaatgtcgctatcatcttcgataagttgtggaaaataaacggtctt 77  Q
    |||||||||| ||| |||||||||| ||  |||||||||||||| ||||||||    
T  1031150 atgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtctt 1031098  T

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