View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18404_high_123 (Length: 266)
Name: NF18404_high_123
Description: NF18404
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18404_high_123 |
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Alignment Details
Target: chr3 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 12 - 252
Target Start/End: Original strand, 51573653 - 51573887
Alignment:
| Q |
12 |
gaacctgtgagaggaaagaagttattgtcaactttcaatttgggaacatgtagtaataataattaataactctgattgttctgttcagtagaggcttact |
111 |
Q |
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| T |
51573653 |
gaacctgtgagaggaaagaagttattgtcaactttcaatttgggaacatgtagtaataataa-------ctctgattgttctgctcagtagaggcttact |
51573745 |
T |
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| Q |
112 |
acacttccaattaagag-gccttttgctgataacaacaattccttccgaacttcggttaagaagccaaaggtgtatgtgaggaggttggtcgataggcca |
210 |
Q |
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| T |
51573746 |
acacttccaattaagagtgccttttgctgataacaacaattccttccgcacttcggttaagaagccaaaggtgtatgtgaggaggttggtcgataggcca |
51573845 |
T |
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| Q |
211 |
ttttctgtgaggatgaatcacataaagagaggatttgatatg |
252 |
Q |
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| T |
51573846 |
ttttctgtgaggatgaatcacataaagagagaatttgatatg |
51573887 |
T |
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