View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18404_high_142 (Length: 248)
Name: NF18404_high_142
Description: NF18404
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18404_high_142 |
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Alignment Details
Target: chr6 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 10306125 - 10306357
Alignment:
| Q |
1 |
aagaagaatcaatgtcctgagaaaaagagtttctggggtgcagttagtttgataattggtgcagcagttggccctggaatgttaggtttaccatcattga |
100 |
Q |
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| T |
10306125 |
aagaagaatcaatgtcctgagaaaaagagtttctggggtgcagttagtttgataattggtgcagcagttggtcctggaatgttaggtttaccatcattga |
10306224 |
T |
|
| Q |
101 |
caataaaatcaggaccattaccatcaacaatcataatcttgatttcatggctttatgtaatctcatcaataattcttgtagctgagctttgttttgatgc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10306225 |
caataaaatcaggaccattaccatcaacaatcataatcttgatttcatggctttatgtaatctcatcaataattcttgtagctgagctttgttttgatgc |
10306324 |
T |
|
| Q |
201 |
aatggaaaatgataatgttgatgaggttagttt |
233 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
10306325 |
aatggaaaatgataatgttgatgaggttagttt |
10306357 |
T |
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