View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18404_high_19 (Length: 616)

Name: NF18404_high_19
Description: NF18404
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18404_high_19
NF18404_high_19
[»] chr7 (55 HSPs)
chr7 (262-478)||(26154190-26154401)
chr7 (194-306)||(26154064-26154177)
chr7 (51-156)||(26153807-26153912)
chr7 (194-302)||(12869407-12869516)
chr7 (8-86)||(28861998-28862076)
chr7 (88-169)||(29248788-29248869)
chr7 (1-86)||(30982255-30982340)
chr7 (1-61)||(5978664-5978724)
chr7 (1-61)||(12102635-12102695)
chr7 (1-45)||(19426665-19426709)
chr7 (1-45)||(28596962-28597006)
chr7 (1-45)||(37392128-37392172)
chr7 (239-305)||(12168716-12168783)
chr7 (104-167)||(44225903-44225966)
chr7 (316-400)||(12869647-12869732)
chr7 (1-45)||(2469777-2469821)
chr7 (2-42)||(6655562-6655602)
chr7 (1-45)||(18157127-18157171)
chr7 (1-45)||(22330573-22330617)
chr7 (477-533)||(25075021-25075077)
chr7 (15-63)||(26153759-26153807)
chr7 (1-45)||(30862721-30862765)
chr7 (1-45)||(35212899-35212943)
chr7 (1-45)||(36990126-36990170)
chr7 (5-61)||(46651761-46651817)
chr7 (1-44)||(5378712-5378755)
chr7 (196-267)||(29248724-29248794)
chr7 (1-44)||(31982142-31982185)
chr7 (23-86)||(32171024-32171087)
chr7 (1-44)||(34348970-34349013)
chr7 (1-86)||(41254861-41254942)
chr7 (1-44)||(46148251-46148294)
chr7 (6-44)||(2414153-2414191)
chr7 (1-43)||(22331155-22331197)
chr7 (360-406)||(29256155-29256201)
chr7 (1-43)||(47424929-47424971)
chr7 (293-362)||(2986991-2987060)
chr7 (4-45)||(21839075-21839116)
chr7 (479-547)||(26154425-26154491)
chr7 (4-45)||(27688725-27688766)
chr7 (1-38)||(40842490-40842527)
chr7 (4-61)||(44894400-44894457)
chr7 (5-45)||(7390716-7390756)
chr7 (5-45)||(7807145-7807185)
chr7 (262-306)||(12869534-12869578)
chr7 (1-45)||(19510299-19510343)
chr7 (1-45)||(25940609-25940653)
chr7 (1-45)||(30180592-30180636)
chr7 (5-61)||(33684769-33684825)
chr7 (5-45)||(37325761-37325801)
chr7 (1-45)||(42204668-42204712)
chr7 (1-45)||(45607109-45607153)
chr7 (1-45)||(47193012-47193056)
chr7 (1-45)||(47905058-47905102)
chr7 (1-45)||(48866872-48866916)
[»] chr8 (66 HSPs)
chr8 (194-311)||(24618831-24618949)
chr8 (242-358)||(29671387-29671505)
chr8 (194-311)||(15892894-15893012)
chr8 (1-86)||(426186-426270)
chr8 (88-169)||(15893004-15893085)
chr8 (95-169)||(4472778-4472852)
chr8 (95-160)||(27187760-27187825)
chr8 (6-86)||(42996552-42996632)
chr8 (1-60)||(37101613-37101672)
chr8 (88-169)||(30944849-30944930)
chr8 (5-45)||(9895095-9895135)
chr8 (1-45)||(11879432-11879476)
chr8 (1-45)||(11896848-11896892)
chr8 (1-61)||(22767215-22767275)
chr8 (5-45)||(28570349-28570389)
chr8 (5-45)||(28577942-28577982)
chr8 (1-45)||(30925596-30925640)
chr8 (2-86)||(43873592-43873676)
chr8 (1-44)||(3650198-3650241)
chr8 (1-63)||(21418516-21418578)
chr8 (286-400)||(27187441-27187560)
chr8 (5-63)||(27836269-27836327)
chr8 (242-303)||(27187653-27187714)
chr8 (104-165)||(33228410-33228471)
chr8 (1-42)||(40713656-40713697)
chr8 (1-42)||(41703404-41703445)
chr8 (1-45)||(1796568-1796612)
chr8 (1-45)||(7678817-7678861)
chr8 (5-45)||(16011859-16011899)
chr8 (5-61)||(21273636-21273692)
chr8 (1-61)||(23258117-23258177)
chr8 (1-45)||(28473487-28473531)
chr8 (1-61)||(28927766-28927826)
chr8 (87-167)||(29671277-29671357)
chr8 (1-45)||(31665932-31665976)
chr8 (1-45)||(37524370-37524414)
chr8 (1-44)||(20473864-20473907)
chr8 (1-44)||(21648874-21648917)
chr8 (1-44)||(34474034-34474077)
chr8 (1-44)||(40102108-40102151)
chr8 (6-45)||(42689875-42689914)
chr8 (6-45)||(44672175-44672214)
chr8 (5-63)||(3988994-3989052)
chr8 (1-43)||(9000958-9001000)
chr8 (1-43)||(22836083-22836125)
chr8 (1-43)||(33692806-33692848)
chr8 (4-45)||(3394644-3394685)
chr8 (5-42)||(9047015-9047052)
chr8 (326-406)||(24618590-24618673)
chr8 (278-311)||(24618640-24618673)
chr8 (317-362)||(24618828-24618873)
chr8 (262-311)||(27187587-27187636)
chr8 (269-302)||(32076613-32076646)
chr8 (218-318)||(33228491-33228591)
chr8 (238-305)||(5015891-5015958)
chr8 (479-547)||(5155442-5155510)
chr8 (1-45)||(6005029-6005073)
chr8 (1-45)||(6825219-6825263)
chr8 (5-45)||(9963775-9963815)
chr8 (1-45)||(14548767-14548811)
chr8 (1-45)||(24946087-24946131)
chr8 (196-264)||(30944924-30944991)
chr8 (1-45)||(40719586-40719630)
chr8 (5-61)||(42941613-42941669)
chr8 (1-45)||(43587726-43587770)
chr8 (1-45)||(45101481-45101525)
[»] chr1 (57 HSPs)
chr1 (269-412)||(38810020-38810166)
chr1 (195-311)||(38810192-38810309)
chr1 (1-63)||(34187349-34187411)
chr1 (5-45)||(14002684-14002724)
chr1 (1-61)||(22389451-22389511)
chr1 (1-45)||(25061818-25061862)
chr1 (1-45)||(30439335-30439379)
chr1 (1-45)||(49425822-49425866)
chr1 (1-63)||(25302569-25302631)
chr1 (1-63)||(50659116-50659178)
chr1 (1-45)||(4604614-4604658)
chr1 (5-45)||(8391280-8391320)
chr1 (1-45)||(23554836-23554880)
chr1 (1-45)||(25098730-25098774)
chr1 (1-45)||(27352715-27352759)
chr1 (1-61)||(31290134-31290194)
chr1 (1-45)||(35043662-35043706)
chr1 (1-61)||(39010899-39010959)
chr1 (1-45)||(40595996-40596040)
chr1 (1-61)||(40610314-40610374)
chr1 (1-45)||(43612024-43612068)
chr1 (1-45)||(45272102-45272146)
chr1 (1-45)||(47059832-47059876)
chr1 (1-45)||(48872464-48872508)
chr1 (1-45)||(50527999-50528043)
chr1 (1-45)||(51339642-51339686)
chr1 (104-167)||(25818599-25818662)
chr1 (1-44)||(28253100-28253143)
chr1 (2-45)||(43640929-43640972)
chr1 (276-314)||(33401829-33401867)
chr1 (278-311)||(1181137-1181170)
chr1 (4-61)||(5477089-5477146)
chr1 (278-311)||(12067639-12067672)
chr1 (1-86)||(16836016-16836100)
chr1 (4-45)||(16987535-16987576)
chr1 (1-38)||(31427906-31427943)
chr1 (1-42)||(31436905-31436946)
chr1 (87-128)||(38810335-38810376)
chr1 (1-42)||(50797865-50797906)
chr1 (1-45)||(4618729-4618773)
chr1 (1-45)||(8464455-8464499)
chr1 (1-45)||(15061930-15061974)
chr1 (1-45)||(17167934-17167978)
chr1 (5-45)||(17526509-17526549)
chr1 (1-45)||(25995545-25995589)
chr1 (1-45)||(29294033-29294077)
chr1 (5-45)||(30530516-30530556)
chr1 (1-45)||(30631787-30631831)
chr1 (1-45)||(35846261-35846305)
chr1 (1-45)||(36669312-36669356)
chr1 (5-45)||(37516001-37516041)
chr1 (5-45)||(37843374-37843414)
chr1 (1-45)||(37947162-37947206)
chr1 (5-45)||(43105194-43105234)
chr1 (1-45)||(43196031-43196075)
chr1 (1-45)||(44730729-44730773)
chr1 (1-45)||(48325307-48325351)
[»] chr5 (69 HSPs)
chr5 (194-302)||(6374850-6374959)
chr5 (217-305)||(16109654-16109745)
chr5 (194-304)||(8736267-8736378)
chr5 (1-60)||(10232584-10232643)
chr5 (1-60)||(12661874-12661933)
chr5 (1-87)||(42909804-42909890)
chr5 (215-311)||(28197020-28197116)
chr5 (267-362)||(8736153-8736248)
chr5 (90-177)||(8736362-8736449)
chr5 (194-288)||(16109555-16109650)
chr5 (1-61)||(5130304-5130364)
chr5 (4-86)||(471902-471984)
chr5 (87-169)||(6374776-6374858)
chr5 (1-63)||(19376056-19376118)
chr5 (87-165)||(33937152-33937230)
chr5 (262-311)||(18263318-18263367)
chr5 (194-267)||(33937226-33937299)
chr5 (104-169)||(38740008-38740073)
chr5 (1-61)||(39595359-39595419)
chr5 (1-44)||(12910869-12910912)
chr5 (1-44)||(17063950-17063993)
chr5 (269-363)||(6375049-6375143)
chr5 (1-63)||(29402267-29402329)
chr5 (5-63)||(33910012-33910070)
chr5 (269-311)||(33937407-33937449)
chr5 (1-42)||(2863634-2863675)
chr5 (1-42)||(12349866-12349907)
chr5 (194-318)||(17344428-17344552)
chr5 (262-295)||(20421576-20421609)
chr5 (4-61)||(20719941-20719998)
chr5 (4-45)||(33243683-33243724)
chr5 (1-45)||(7077281-7077325)
chr5 (1-45)||(9636100-9636144)
chr5 (5-45)||(13613906-13613946)
chr5 (4-44)||(31284337-31284377)
chr5 (1-45)||(34381097-34381141)
chr5 (5-61)||(34767343-34767399)
chr5 (5-45)||(41460205-41460245)
chr5 (5-44)||(14206478-14206517)
chr5 (1-39)||(14647646-14647684)
chr5 (4-86)||(21575716-21575798)
chr5 (5-63)||(31329050-31329108)
chr5 (276-314)||(34016393-34016431)
chr5 (8-61)||(2117566-2117619)
chr5 (4-45)||(6865729-6865770)
chr5 (1-74)||(8087884-8087957)
chr5 (4-45)||(11666267-11666308)
chr5 (88-169)||(16109482-16109563)
chr5 (104-169)||(17344371-17344436)
chr5 (104-169)||(20883529-20883594)
chr5 (1-42)||(25038165-25038206)
chr5 (194-318)||(26505993-26506117)
chr5 (269-363)||(28197190-28197292)
chr5 (104-169)||(35049334-35049399)
chr5 (1-45)||(91300-91344)
chr5 (5-45)||(4434560-4434600)
chr5 (5-45)||(7927440-7927480)
chr5 (1-45)||(10522860-10522904)
chr5 (1-45)||(11767932-11767976)
chr5 (1-61)||(12718306-12718366)
chr5 (1-61)||(12779532-12779592)
chr5 (5-45)||(13734302-13734342)
chr5 (275-311)||(16109773-16109809)
chr5 (1-45)||(24431560-24431604)
chr5 (1-45)||(24792538-24792581)
chr5 (5-45)||(28811517-28811557)
chr5 (5-45)||(40566159-40566199)
chr5 (1-45)||(41192672-41192716)
chr5 (1-45)||(43153002-43153046)
[»] chr4 (61 HSPs)
chr4 (87-169)||(41784827-41784909)
chr4 (196-267)||(41784903-41784974)
chr4 (1-89)||(46794401-46794487)
chr4 (1-44)||(36792417-36792460)
chr4 (1-63)||(51717208-51717270)
chr4 (104-165)||(1938792-1938853)
chr4 (1-61)||(9162151-9162211)
chr4 (1-45)||(54036471-54036515)
chr4 (1-40)||(940217-940256)
chr4 (1-44)||(6953331-6953374)
chr4 (479-533)||(43138668-43138722)
chr4 (479-516)||(1605294-1605331)
chr4 (262-295)||(21178639-21178672)
chr4 (4-45)||(23690319-23690360)
chr4 (1-42)||(51039061-51039102)
chr4 (1-45)||(4896442-4896486)
chr4 (5-45)||(12074093-12074133)
chr4 (1-45)||(30778206-30778250)
chr4 (4-60)||(31240736-31240792)
chr4 (1-45)||(35017238-35017282)
chr4 (1-45)||(37977200-37977244)
chr4 (275-311)||(41785088-41785124)
chr4 (1-61)||(42915145-42915205)
chr4 (1-44)||(22257139-22257182)
chr4 (1-44)||(39241246-39241289)
chr4 (7-86)||(41119427-41119506)
chr4 (1-84)||(49194968-49195050)
chr4 (3-45)||(1987655-1987697)
chr4 (5-63)||(24337280-24337338)
chr4 (1-43)||(31413730-31413772)
chr4 (104-162)||(50006869-50006927)
chr4 (1-38)||(3286903-3286940)
chr4 (4-61)||(31658007-31658064)
chr4 (4-45)||(41952916-41952957)
chr4 (1-42)||(46173622-46173663)
chr4 (4-45)||(46567017-46567058)
chr4 (1-42)||(48099895-48099936)
chr4 (4-45)||(48148456-48148497)
chr4 (4-61)||(51389404-51389461)
chr4 (1-42)||(54801081-54801122)
chr4 (1-42)||(55642550-55642591)
chr4 (5-61)||(1580209-1580265)
chr4 (1-45)||(1796450-1796494)
chr4 (5-45)||(16004268-16004308)
chr4 (5-45)||(16508919-16508959)
chr4 (1-45)||(18874866-18874910)
chr4 (5-45)||(29577378-29577418)
chr4 (1-45)||(34027981-34028025)
chr4 (6-86)||(34974543-34974623)
chr4 (1-45)||(38952774-38952818)
chr4 (1-45)||(39844200-39844244)
chr4 (1-45)||(40721906-40721950)
chr4 (1-45)||(43982982-43983026)
chr4 (1-45)||(45678348-45678392)
chr4 (5-45)||(46844183-46844223)
chr4 (5-77)||(46911987-46912059)
chr4 (1-45)||(47134782-47134826)
chr4 (1-45)||(47998679-47998723)
chr4 (1-45)||(53292235-53292279)
chr4 (1-37)||(54615453-54615489)
chr4 (1-45)||(56025341-56025385)
[»] chr3 (70 HSPs)
chr3 (87-169)||(30531234-30531316)
chr3 (1-59)||(32457683-32457741)
chr3 (238-305)||(32125083-32125151)
chr3 (1-45)||(6126539-6126583)
chr3 (1-45)||(51464214-51464258)
chr3 (1-44)||(51650439-51650482)
chr3 (249-311)||(9193989-9194051)
chr3 (1-63)||(35272112-35272174)
chr3 (1-59)||(39604174-39604232)
chr3 (1-59)||(46473213-46473271)
chr3 (4-45)||(27198096-27198137)
chr3 (4-45)||(29800491-29800532)
chr3 (1-45)||(981555-981599)
chr3 (1-45)||(1901868-1901912)
chr3 (1-45)||(1911314-1911358)
chr3 (1-45)||(7949873-7949917)
chr3 (1-45)||(8066440-8066484)
chr3 (1-45)||(25959484-25959528)
chr3 (479-551)||(30259817-30259889)
chr3 (1-61)||(30839542-30839602)
chr3 (5-45)||(32687902-32687942)
chr3 (1-45)||(33007445-33007489)
chr3 (5-45)||(34271430-34271470)
chr3 (1-61)||(37215157-37215217)
chr3 (1-45)||(37303016-37303060)
chr3 (1-45)||(42475919-42475963)
chr3 (5-45)||(43169695-43169735)
chr3 (6-61)||(5188326-5188381)
chr3 (317-364)||(9194009-9194056)
chr3 (1-44)||(36869780-36869823)
chr3 (2-45)||(41717349-41717392)
chr3 (1-44)||(41877554-41877597)
chr3 (1-44)||(44096513-44096556)
chr3 (1-63)||(14957921-14957983)
chr3 (1-43)||(26279969-26280011)
chr3 (194-260)||(27934319-27934385)
chr3 (5-43)||(29057737-29057775)
chr3 (197-267)||(30531311-30531381)
chr3 (325-406)||(30531562-30531646)
chr3 (3-45)||(31326795-31326837)
chr3 (1-43)||(48117421-48117463)
chr3 (1-43)||(50745634-50745676)
chr3 (1-43)||(55195432-55195474)
chr3 (5-59)||(55344224-55344278)
chr3 (104-169)||(20514194-20514259)
chr3 (1-58)||(28269891-28269948)
chr3 (4-45)||(33971971-33972012)
chr3 (4-45)||(36799486-36799527)
chr3 (4-45)||(39540323-39540364)
chr3 (1-38)||(46003790-46003827)
chr3 (1-42)||(46953031-46953072)
chr3 (5-45)||(1765482-1765522)
chr3 (5-61)||(3483208-3483264)
chr3 (1-61)||(11173535-11173595)
chr3 (1-45)||(27162409-27162453)
chr3 (5-61)||(29705992-29706048)
chr3 (277-305)||(30531562-30531590)
chr3 (1-45)||(32656060-32656104)
chr3 (1-45)||(32795921-32795965)
chr3 (1-45)||(34628017-34628061)
chr3 (1-45)||(35554057-35554101)
chr3 (1-45)||(37710489-37710533)
chr3 (5-45)||(41309089-41309129)
chr3 (5-45)||(43900861-43900901)
chr3 (5-45)||(44127134-44127174)
chr3 (5-45)||(44695100-44695140)
chr3 (1-45)||(44855336-44855380)
chr3 (1-61)||(49130939-49130999)
chr3 (5-45)||(49457654-49457694)
chr3 (5-45)||(51385382-51385422)
[»] chr2 (58 HSPs)
chr2 (1-61)||(13711146-13711206)
chr2 (1-86)||(37085120-37085207)
chr2 (6-60)||(12065999-12066053)
chr2 (111-169)||(22728379-22728437)
chr2 (1-63)||(42251844-42251906)
chr2 (5-61)||(11164302-11164358)
chr2 (1-45)||(19913869-19913913)
chr2 (196-267)||(28758989-28759060)
chr2 (1-63)||(1889232-1889294)
chr2 (1-63)||(6639396-6639458)
chr2 (5-87)||(28014045-28014127)
chr2 (4-61)||(41353423-41353480)
chr2 (1-61)||(3091826-3091886)
chr2 (1-45)||(5167684-5167728)
chr2 (1-45)||(5455395-5455439)
chr2 (1-61)||(12600133-12600193)
chr2 (1-61)||(13104564-13104624)
chr2 (5-45)||(13553232-13553272)
chr2 (1-45)||(23880180-23880224)
chr2 (1-45)||(26321639-26321683)
chr2 (1-61)||(32750083-32750143)
chr2 (1-61)||(36133059-36133119)
chr2 (5-45)||(45515541-45515581)
chr2 (6-45)||(13850126-13850165)
chr2 (1-44)||(28165214-28165257)
chr2 (277-311)||(19478974-19479008)
chr2 (269-311)||(28759168-28759210)
chr2 (9-63)||(31296767-31296821)
chr2 (1-43)||(35705861-35705903)
chr2 (87-165)||(36342434-36342512)
chr2 (1-43)||(41156947-41156989)
chr2 (1-63)||(43650471-43650533)
chr2 (1-86)||(15141547-15141632)
chr2 (1-42)||(32688489-32688530)
chr2 (104-169)||(35004294-35004359)
chr2 (4-45)||(39133810-39133851)
chr2 (4-45)||(40951278-40951319)
chr2 (3-43)||(1574540-1574580)
chr2 (1-45)||(3196029-3196073)
chr2 (1-45)||(3959981-3960025)
chr2 (479-551)||(4865634-4865706)
chr2 (1-45)||(5067583-5067627)
chr2 (5-45)||(7428518-7428558)
chr2 (1-45)||(11229263-11229307)
chr2 (4-44)||(12962474-12962514)
chr2 (6-46)||(15019111-15019151)
chr2 (1-45)||(19523343-19523387)
chr2 (1-45)||(19631473-19631517)
chr2 (1-45)||(19668129-19668173)
chr2 (1-45)||(19828374-19828418)
chr2 (5-61)||(22390241-22390297)
chr2 (5-45)||(25801753-25801793)
chr2 (1-45)||(29795521-29795565)
chr2 (1-45)||(30413674-30413718)
chr2 (1-45)||(30856892-30856936)
chr2 (1-45)||(34249665-34249709)
chr2 (1-45)||(34913173-34913217)
chr2 (1-45)||(43725290-43725334)
[»] scaffold0070 (1 HSPs)
scaffold0070 (87-169)||(45736-45818)
[»] chr6 (27 HSPs)
chr6 (1-63)||(31517104-31517166)
chr6 (4-44)||(10628352-10628392)
chr6 (1-60)||(9954633-9954692)
chr6 (194-318)||(1031218-1031343)
chr6 (249-311)||(7647961-7648023)
chr6 (104-169)||(1031161-1031226)
chr6 (4-45)||(34490435-34490476)
chr6 (1-45)||(16533202-16533246)
chr6 (11-63)||(31480760-31480812)
chr6 (4-63)||(29383645-29383704)
chr6 (5-44)||(32253869-32253908)
chr6 (1-43)||(2165244-2165286)
chr6 (1-43)||(2176877-2176919)
chr6 (87-165)||(7648080-7648158)
chr6 (2-59)||(1688301-1688358)
chr6 (1-42)||(2163776-2163817)
chr6 (1-42)||(2175409-2175450)
chr6 (1-42)||(3179948-3179989)
chr6 (1-42)||(21443773-21443814)
chr6 (5-86)||(25554334-25554415)
chr6 (5-42)||(28548966-28549003)
chr6 (1-45)||(9188888-9188932)
chr6 (5-61)||(16336996-16337052)
chr6 (1-45)||(17835697-17835741)
chr6 (1-45)||(32457194-32457238)
chr6 (1-45)||(32644697-32644741)
chr6 (5-61)||(32853070-32853126)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-86)||(31502-31586)
[»] scaffold0241 (1 HSPs)
scaffold0241 (1-45)||(5314-5358)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-45)||(34491-34535)
[»] scaffold0060 (1 HSPs)
scaffold0060 (1-44)||(6902-6945)
[»] scaffold0018 (1 HSPs)
scaffold0018 (4-45)||(36087-36128)
[»] scaffold0115 (2 HSPs)
scaffold0115 (1-45)||(15130-15174)
scaffold0115 (1-43)||(35437-35479)
[»] scaffold0501 (1 HSPs)
scaffold0501 (1-44)||(10459-10502)
[»] scaffold0286 (2 HSPs)
scaffold0286 (1-43)||(17123-17165)
scaffold0286 (1-42)||(18592-18633)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-43)||(3028-3070)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-63)||(219588-219650)
[»] scaffold0522 (1 HSPs)
scaffold0522 (1-45)||(2446-2490)
[»] scaffold0508 (1 HSPs)
scaffold0508 (1-45)||(11478-11522)
[»] scaffold0204 (1 HSPs)
scaffold0204 (1-45)||(27424-27468)
[»] scaffold0166 (1 HSPs)
scaffold0166 (1-45)||(34921-34964)
[»] scaffold0057 (1 HSPs)
scaffold0057 (5-45)||(38968-39008)
[»] scaffold0036 (1 HSPs)
scaffold0036 (5-45)||(18093-18133)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-61)||(113710-113770)
[»] scaffold0002 (1 HSPs)
scaffold0002 (5-45)||(440807-440847)


Alignment Details
Target: chr7 (Bit Score: 101; Significance: 9e-50; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 262 - 478
Target Start/End: Original strand, 26154190 - 26154401
Alignment:
Q  262 tgtgtatttaacaacgaatttgtgtaatttggatcgtttatgtgtaattacgtaattaacaacgaatttgttaaatttggatcgattatgtgtgatta-- 359  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||   |||||||| ||| |||||| ||||||||||| |||||||| |||||      
T  26154190 tgtgtatttaacgacgaatttgtgtaatttggatcgtttatgtgtgattctctaattaacgacgcatttgtgaaatttggatcaattatgtgagattatg 26154289  T
Q  360 -tgttaaactggtgtaattcgggtcaattatgagagtgtaaaaattacaaatcaatgaatcattaatgacttggttaatttcattcaatgctattctgct 458  Q
     ||||||||||||||||||||| | | |||| || || |||||||||||        |||||||||||||||||||||| ||||||||||||||||||||    
T  26154290 ttgttaaactggtgtaattcggataagttataagtgtataaaaattaca--------aatcattaatgacttggttaatgtcattcaatgctattctgct 26154381  T
Q  459 cctatatcagtacccaacat 478  Q
    |||||||| ||| |||||||    
T  26154382 cctatatctgtagccaacat 26154401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 194 - 306
Target Start/End: Original strand, 26154064 - 26154177
Alignment:
Q  194 ttaacgtgtaataatgtattgtgttcgaatttgtgtctctaactttgaatttgaatgaatttgtgttatgtgt-atttaacaacgaatttgtgtaatttg 292  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||| | ||||||||||||||||    
T  26154064 ttaacgtgtaataatgtaatgtgttcgaatttgtgtctctaacgttgaattttaatgaatttgtgttatgtgtaatttaacgatgaatttgtgtaatttg 26154163  T
Q  293 gatcgtttatgtgt 306  Q
    ||||||||||||||    
T  26154164 gatcgtttatgtgt 26154177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 51 - 156
Target Start/End: Original strand, 26153807 - 26153912
Alignment:
Q  51 aagttgtcacatatggttgctcaaatatcactactcattacatatttagattaatggttcaaaataacattttatgtctttatctccgatccattgaagt 150  Q
    |||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  26153807 aagttgtctcatatgtttgttcaaatatcactactcattacatatttagattaatggttcaaaataacattttatctctttatgtccgatccattgaagt 26153906  T
Q  151 ctaata 156  Q
     |||||    
T  26153907 gtaata 26153912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 194 - 302
Target Start/End: Original strand, 12869407 - 12869516
Alignment:
Q  194 ttaacgtgtaataatgtattgtgttcgaatttgtgtctctaactttgaatttgaatgaatttgtgttatgtgta-tttaacaacgaatttgtgtaatttg 292  Q
    |||||| |||||| |||| |||||| |||||||||||  |||   | ||||| ||||||||| ||||||||||| |||||| |||| |||||||||||||    
T  12869407 ttaacgcgtaatagtgtaatgtgtttgaatttgtgtccataataatcaattttaatgaatttatgttatgtgtaatttaacgacgagtttgtgtaatttg 12869506  T
Q  293 gatcgtttat 302  Q
    ||||||||||    
T  12869507 gatcgtttat 12869516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 28862076 - 28861998
Alignment:
Q  8 ttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacatatggttgctcaaatatcactactc 86  Q
    |||||||||||||  |||||||| |||||||||| |||   ||||||||||||| ||| ||| ||||||||||||||||    
T  28862076 ttctctctccattgtttttaaccgatgaaaagagggaaaaaagaagttgtcacaaatgattgttcaaatatcactactc 28861998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 88 - 169
Target Start/End: Complemental strand, 29248869 - 29248788
Alignment:
Q  88 ttacatatttagattaatggttcaaaataacattttatgtctttatctccgatccattgaagtctaatatttattaacgtgt 169  Q
    |||||| ||||  ||||||||| |||||||||||||   ||||||| || ||||||||||||| |||||||||| |||||||    
T  29248869 ttacatgtttaatttaatggttgaaaataacattttgcatctttatgtctgatccattgaagtgtaatatttatgaacgtgt 29248788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 30982340 - 30982255
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacatatggttgctcaaatatcactactc 86  Q
    ||||||||||||| || |||| |||| |||||| ||||||||| |   ||||||||||| | ||||||| ||||||||||||||||    
T  30982340 ttcctttttctctttcaattattttttaccaataaaaagagaggaaaaagaagttgtcaaaaatggttgttcaaatatcactactc 30982255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5978664 - 5978724
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||   |||||||||||||    
T  5978664 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaatagaagttgtcaca 5978724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 12102695 - 12102635
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||||||||||  |||||||||||||||||||||||   | |||||||||||    
T  12102695 ttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaataagttgtcaca 12102635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19426665 - 19426709
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||    
T  19426665 ttcctttttctctctccattatttttatccaatgaaaagagagaa 19426709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28596962 - 28597006
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  28596962 ttcctttttctctctccattgtttttaaccaatgaaaagagagaa 28597006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 37392128 - 37392172
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  37392128 ttcctttttctctctccattgtttttaaccaatgaaaagagagaa 37392172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 305
Target Start/End: Complemental strand, 12168783 - 12168716
Alignment:
Q  239 tgaatttgaatgaatttgtgttatgtgta-tttaacaacgaatttgtgtaatttggatcgtttatgtg 305  Q
    ||||||| |||||||||||||| |||||| |||||| | ||||||||||||||| || ||||||||||    
T  12168783 tgaattttaatgaatttgtgttgtgtgtaatttaacgatgaatttgtgtaattttgaccgtttatgtg 12168716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 44225903 - 44225966
Alignment:
Q  104 atggttcaaaataacattttatgtctttatctccgatccattgaagtctaatatttattaacgt 167  Q
    |||||| |||||||| |||||  ||||||| |||||||| ||||||| ||||||||||||||||    
T  44225903 atggttgaaaataaccttttacatctttatgtccgatccgttgaagtgtaatatttattaacgt 44225966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 316 - 400
Target Start/End: Original strand, 12869647 - 12869732
Alignment:
Q  316 attaacaacgaatttgttaaatttggatcgattatgtg-tgattatgttaaactggtgtaattcgggtcaattatgagagtgtaaa 400  Q
    |||| |||| ||||||| ||| |||||||||||||||| | ||  |||||||||| |||||||||| ||||||| ||| |||||||    
T  12869647 attatcaacaaatttgtgaaaattggatcgattatgtgattatgttgttaaactgatgtaattcggttcaattacgagtgtgtaaa 12869732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 2469777 - 2469821
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||| |||| ||||||||||| ||||||    
T  2469777 ttcctttttctctctccattattttttaccaatgaaaatagagaa 2469821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 6655602 - 6655562
Alignment:
Q  2 tcctttttctctctccattaattttaaccaatgaaaagaga 42  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  6655602 tcctttttctctctccattgtttttaaccaatgaaaagaga 6655562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 18157171 - 18157127
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  18157171 ttcctttttctctctccattgtttttgaccaatgaaaagagagaa 18157127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 22330617 - 22330573
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||    
T  22330617 ttcctttttctctctccattgtttttatccaatgaaaagagagaa 22330573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 533
Target Start/End: Original strand, 25075021 - 25075077
Alignment:
Q  477 atttaagtcacgttgaatttaatacctgcgtgacttaagtaatgttgaaggtatttt 533  Q
    ||||||||||||||| |||||| | |||||||||||||||  ||| |||||||||||    
T  25075021 atttaagtcacgttggatttaacatctgcgtgacttaagttgtgtggaaggtatttt 25075077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 26153759 - 26153807
Alignment:
Q  15 tccattaattttaaccaatgaaaagagagaattgagaagttgtcacata 63  Q
    |||||| ||||||| | |||||||||||||| |||||||||||||||||    
T  26153759 tccattgattttaaacgatgaaaagagagaaatgagaagttgtcacata 26153807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 30862721 - 30862765
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||| |||| |||||| |||||||||||    
T  30862721 ttcctttttctctctccattatttttgaccaataaaaagagagaa 30862765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35212943 - 35212899
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||| |||| ||||||||||||| |||||||||    
T  35212943 ttcctttttctctctctattatttttaaccaatgagaagagagaa 35212899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 36990126 - 36990170
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||| ||||||||||| |||| ||||||    
T  36990126 ttcctttttctctctccattatttttaaccaataaaaaaagagaa 36990170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 46651761 - 46651817
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||||||  |||| ||||||||||||||||||   |||||||||||||    
T  46651761 tttttctctctccattgtttttgaccaatgaaaagagagaaaatagaagttgtcaca 46651817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 5378712 - 5378755
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagaga 44  Q
    ||||||||||||||||||||  |||| |||||||||||||||||    
T  5378712 ttcctttttctctctccattgtttttgaccaatgaaaagagaga 5378755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 267
Target Start/End: Complemental strand, 29248794 - 29248724
Alignment:
Q  196 aacgtgtaataatgtattgtgttcgaatttgtgtctctaactttgaatttgaatgaatttgtgttatgtgta 267  Q
    ||||||||||| |||| ||| ||| ||||||||||  |||  |||||||| |||||||||||||||||||||    
T  29248794 aacgtgtaatagtgtaatgt-ttccaatttgtgtccgtaatgttgaatttaaatgaatttgtgttatgtgta 29248724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31982142 - 31982185
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagaga 44  Q
    ||||||||||||||||||||  |||| |||||||||||||||||    
T  31982142 ttcctttttctctctccattgtttttgaccaatgaaaagagaga 31982185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 32171087 - 32171024
Alignment:
Q  23 ttttaaccaatgaaaagagagaattgagaagttgtcacatatggttgctcaaatatcactactc 86  Q
    |||| ||||||||||||||||||   |||| ||||| || ||||||| ||||||||||||||||    
T  32171087 ttttgaccaatgaaaagagagaaaaaagaaattgtctcaaatggttgttcaaatatcactactc 32171024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 34349013 - 34348970
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagaga 44  Q
    ||||||||||||||||||||  |||| |||||||||||||||||    
T  34349013 ttcctttttctctctccattgttttttaccaatgaaaagagaga 34348970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 41254861 - 41254942
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacatatggttgctcaaatatcactactc 86  Q
    |||||||||| ||||| |||  |||||||||||||||||||||||   | ||||||||||| |  |||| ||||||||||||||||    
T  41254861 ttcctttttccctctctattgtttttaaccaatgaaaagagagaa---aaaagttgtcaca-aaagttgttcaaatatcactactc 41254942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 46148251 - 46148294
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagaga 44  Q
    ||||||||||||||||||||  |||| |||||||||||||||||    
T  46148251 ttcctttttctctctccattgtttttgaccaatgaaaagagaga 46148294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 2414153 - 2414191
Alignment:
Q  6 ttttctctctccattaattttaaccaatgaaaagagaga 44  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  2414153 ttttctctctccattgtttttaaccaatgaaaagagaga 2414191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22331197 - 22331155
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagag 43  Q
    ||||||||||||||||||||  |||| ||||||||||||||||    
T  22331197 ttcctttttctctctccattgttttttaccaatgaaaagagag 22331155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 360 - 406
Target Start/End: Complemental strand, 29256201 - 29256155
Alignment:
Q  360 tgttaaactggtgtaattcgggtcaattatgagagtgtaaaaattac 406  Q
    ||||||||||| ||||||||| ||||||||||| ||||||| |||||    
T  29256201 tgttaaactggcgtaattcggttcaattatgagtgtgtaaagattac 29256155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 47424971 - 47424929
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagag 43  Q
    ||||||||||||||||||||  ||||||||||| |||||||||    
T  47424971 ttcctttttctctctccattgtttttaaccaataaaaagagag 47424929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 362
Target Start/End: Complemental strand, 2987060 - 2986991
Alignment:
Q  293 gatcgtttatgtgtaattacgtaattaacaacgaatttgttaaatttggatcgattatgtgtgattatgt 362  Q
    |||||||||||||| ||| ||| || ||| | ||||||||  ||||||||||| |||||| |||||||||    
T  2987060 gatcgtttatgtgtgattgcgtgataaacgatgaatttgtgtaatttggatcgtttatgtatgattatgt 2986991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 21839116 - 21839075
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||||  |||||||||||||||| ||||||    
T  21839116 ctttttctctctccattgtttttaaccaatgaaaaaagagaa 21839075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 547
Target Start/End: Original strand, 26154425 - 26154491
Alignment:
Q  479 ttaagtcacgttgaatttaatacctgcgtgacttaagtaatgttgaaggtatttttatcggtttgtatg 547  Q
    ||||||||| |||| | ||| ||||||||||||||||| |  |||| ||||||||||||||||| ||||    
T  26154425 ttaagtcacattgagtctaacacctgcgtgacttaagtca--ttgagggtatttttatcggtttctatg 26154491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 27688725 - 27688766
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||||  |||| ||||||||||||||||||    
T  27688725 ctttttctctctccattgtttttgaccaatgaaaagagagaa 27688766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 40842490 - 40842527
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaa 38  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  40842490 ttcctttttctctctccattgtttttaaccaatgaaaa 40842527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 44894457 - 44894400
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    |||||||||||||||||  |||| |||||||||||||||||    |||||||||||||    
T  44894457 ctttttctctctccattgttttttaccaatgaaaagagagataaaagaagttgtcaca 44894400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 7390756 - 7390716
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||| |||||| |||| |||||||||||    
T  7390756 tttttctctctccattatttttaatcaataaaaagagagaa 7390716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 7807145 - 7807185
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||| |||||  |||||||||||||||||||||||    
T  7807145 tttttctctcaccattgtttttaaccaatgaaaagagagaa 7807185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 262 - 306
Target Start/End: Original strand, 12869534 - 12869578
Alignment:
Q  262 tgtgtatttaacaacgaatttgtgtaatttggatcgtttatgtgt 306  Q
    |||||||||||| |||||||||| |||||| ||||| ||||||||    
T  12869534 tgtgtatttaacgacgaatttgtataattttgatcgattatgtgt 12869578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 19510343 - 19510299
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| | ||||||||||||||||    
T  19510343 ttcctttttctctctccattgtttttgatcaatgaaaagagagaa 19510299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25940653 - 25940609
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||| |||  |||| ||||||||||||||||||    
T  25940653 ttcctttttctctctcaattgtttttgaccaatgaaaagagagaa 25940609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 30180592 - 30180636
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||| ||||||||||||||    
T  30180592 ttcctttttctctctccattgtttttgacccatgaaaagagagaa 30180636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 33684769 - 33684825
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||||||  |||| ||||||||||||| ||||   |||||||||||||    
T  33684769 tttttctctctccattgttttttaccaatgaaaagatagaaaaaagaagttgtcaca 33684825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 37325801 - 37325761
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||  ||||||||||| |||||||||||    
T  37325801 tttttctctctccattgtttttaaccaataaaaagagagaa 37325761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 42204712 - 42204668
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||| ||||  |||| ||||||||||||||||||    
T  42204712 ttcctttttctctcttcattgtttttgaccaatgaaaagagagaa 42204668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 45607109 - 45607153
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| |||||||||||| |||||    
T  45607109 ttcctttttctctctccattgtttttgaccaatgaaaagtgagaa 45607153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 47193012 - 47193056
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| |||||||||||| |||||    
T  47193012 ttcctttttctctctccattgtttttgaccaatgaaaagtgagaa 47193056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 47905102 - 47905058
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||| ||| ||||||||| |||| ||||||||||||||||||    
T  47905102 ttcctttctctttctccattattttttaccaatgaaaagagagaa 47905058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 48866916 - 48866872
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| || |||||||||||||||    
T  48866916 ttcctttttctctctccattgtttttgactaatgaaaagagagaa 48866872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 1e-36; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 194 - 311
Target Start/End: Complemental strand, 24618949 - 24618831
Alignment:
Q  194 ttaacgtgtaataatgtattgtgttcgaatttgtgtctctaactttgaatttgaatgaatttgtgttatgtgt-atttaacaacgaatttgtgtaatttg 292  Q
    ||||||||||||| |||| ||||||||||||||||||| |||  |||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||    
T  24618949 ttaacgtgtaatagtgtaatgtgttcgaatttgtgtctgtaatgttgaattttaatgaatttgtgttatgtgtaatttaacgacgaatttgtgtaatttg 24618850  T
Q  293 gatcgtttatgtgtaatta 311  Q
    |||||||||||||| ||||    
T  24618849 gatcgtttatgtgtgatta 24618831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 242 - 358
Target Start/End: Original strand, 29671387 - 29671505
Alignment:
Q  242 atttgaatgaatttgtgttatgtgtatttaacaacgaatttgtgtaatttggatcgtttatgtgtaattac--gtaattaacaacgaatttgttaaattt 339  Q
    |||| ||||||||||||   |||||||||||| |||||||||||||||||||||| ||||||||| |||||  || |||||| ||||||||||  |||||    
T  29671387 attttaatgaatttgtggattgtgtatttaacgacgaatttgtgtaatttggatcatttatgtgtgattacgtgtgattaacgacgaatttgtgtaattt 29671486  T
Q  340 ggatcgattatgtgtgatt 358  Q
    | |||||||||||||||||    
T  29671487 gaatcgattatgtgtgatt 29671505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 194 - 311
Target Start/End: Complemental strand, 15893012 - 15892894
Alignment:
Q  194 ttaacgtgtaataatgtattgtgttcgaatttgtgtctctaactttgaatttgaatgaatttgtgttatgtgt-atttaacaacgaatttgtgtaatttg 292  Q
    ||||||||||||| |||| |||||| |||||||| ||  |||  |||||||| |||||||||||||||||||| ||||||| ||||| || |||||||||    
T  15893012 ttaacgtgtaatagtgtaatgtgtttgaatttgtttccgtaatgttgaattttaatgaatttgtgttatgtgtaatttaacgacgaaattttgtaatttg 15892913  T
Q  293 gatcgtttatgtgtaatta 311  Q
    ||| ||||||||| |||||    
T  15892912 gattgtttatgtgcaatta 15892894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 426186 - 426270
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacatatggttgctcaaatatcactactc 86  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||   |||||||||||||||  |||| ||||||||||||||||    
T  426186 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacata-agttgttcaaatatcactactc 426270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 88 - 169
Target Start/End: Complemental strand, 15893085 - 15893004
Alignment:
Q  88 ttacatatttagattaatggttcaaaataacattttatgtctttatctccgatccattgaagtctaatatttattaacgtgt 169  Q
    |||||| ||||| ||||||||| ||||||||||||||  ||||||| || ||||| ||||||| ||||||||||||||||||    
T  15893085 ttacatgtttaggttaatggttgaaaataacattttacatctttatgtctgatccgttgaagtgtaatatttattaacgtgt 15893004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 4472852 - 4472778
Alignment:
Q  95 tttagattaatggttcaaaataacattttatgtctttatctccgatccattgaagtctaatatttattaacgtgt 169  Q
    ||||| ||||||||| ||||||||||||||  ||||| | || ||||||||||||| ||||||||||||||||||    
T  4472852 tttagtttaatggttgaaaataacattttacatctttgtgtctgatccattgaagtgtaatatttattaacgtgt 4472778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 160
Target Start/End: Complemental strand, 27187825 - 27187760
Alignment:
Q  95 tttagattaatggttcaaaataacattttatgtctttatctccgatccattgaagtctaatattta 160  Q
    ||||| ||||||||| |||||||||||||| |||||||| | ||||||||| ||||||||||||||    
T  27187825 tttaggttaatggttgaaaataacattttacgtctttatgttcgatccattaaagtctaatattta 27187760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 42996552 - 42996632
Alignment:
Q  6 ttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacatatggttgctcaaatatcactactc 86  Q
    |||||||||||||||| |||| ||||||||||||||||||   |||||||||| ||| || ||| ||||||| ||||||||    
T  42996552 ttttctctctccattatttttgaccaatgaaaagagagaaaaaagaagttgtctcatttgattgttcaaataacactactc 42996632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 37101672 - 37101613
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcac 60  Q
    ||||||||||||||||||||  |||||||||||||||||||||||   ||||||||||||    
T  37101672 ttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtcac 37101613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 88 - 169
Target Start/End: Original strand, 30944849 - 30944930
Alignment:
Q  88 ttacatatttagattaatggttcaaaataacattttatgtctttatctccgatccattgaagtctaatatttattaacgtgt 169  Q
    |||||| ||||  ||||||||| |||||||||||||   ||||||| || ||||||||||||| |||||||||| |||||||    
T  30944849 ttacatgtttaatttaatggttgaaaataacattttgcatctttatgtctgatccattgaagtgtaatatttatgaacgtgt 30944930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 9895095 - 9895135
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  9895095 tttttctctctccattatttttaaccaatgaaaagagagaa 9895135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11879476 - 11879432
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||    
T  11879476 ttcctttttctctctccattatttttaaccaatcaaaagagagaa 11879432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11896892 - 11896848
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||    
T  11896892 ttcctttttctctctccattatttttaaccaatcaaaagagagaa 11896848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22767215 - 22767275
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||   |||||||||||||    
T  22767215 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcaca 22767275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 28570389 - 28570349
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  28570389 tttttctctctccattatttttaaccaatgaaaagagagaa 28570349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 28577982 - 28577942
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  28577982 tttttctctctccattatttttaaccaatgaaaagagagaa 28577942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30925640 - 30925596
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  30925640 ttcctttttctctctccattgtttttaaccaatgaaaagagagaa 30925596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 43873676 - 43873592
Alignment:
Q  2 tcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacatatggttgctcaaatatcactactc 86  Q
    |||||||||||||||||||| ||||||| |||  |||||||| |   ||||||||||| | ||| ||| ||||||||||||||||    
T  43873676 tcctttttctctctccattatttttaactaatagaaagagaggaaaaagaagttgtcaaaaatgattgttcaaatatcactactc 43873592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3650198 - 3650241
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagaga 44  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  3650198 ttcctttttctctctccaatatttttaaccaatgaaaagagaga 3650241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 21418578 - 21418516
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacata 63  Q
    |||||||||||||||||||| |||||||||||| |||||| ||||   | |||||||||||||    
T  21418578 ttcctttttctctctccattgattttaaccaataaaaagatagaaaaaataagttgtcacata 21418516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 400
Target Start/End: Complemental strand, 27187560 - 27187441
Alignment:
Q  286 taatttggatcgtttatgtgtaattacgtaatt--aacaacgaatttgttaaatttggatcgattatgtgtgattatgtt---aaactggtgtaattcgg 380  Q
    ||||||||||||||||||||| |||| || |||  |   |||||||| | |||||| ||| ||||| |||||||||||||   ||| ||||||||||| |    
T  27187560 taatttggatcgtttatgtgtgattatgtgattttagtcacgaatttatgaaatttcgattgattacgtgtgattatgttgttaaaatggtgtaattcag 27187461  T
Q  381 gtcaattatgagagtgtaaa 400  Q
     ||||||||||| |||||||    
T  27187460 atcaattatgagtgtgtaaa 27187441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 27836269 - 27836327
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacata 63  Q
    |||||||||||| ||||||||| |||||||||||||||||    |||||||||||||||    
T  27836269 tttttctctctctattaattttgaccaatgaaaagagagagaaaagaagttgtcacata 27836327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 242 - 303
Target Start/End: Complemental strand, 27187714 - 27187653
Alignment:
Q  242 atttgaatgaatttgtgttatgtgtatttaacaacgaatttgtgtaatttggatcgtttatg 303  Q
    |||| ||||||||||||   |||||||||| | ||||||| |||||||||||||||||||||    
T  27187714 attttaatgaatttgtggattgtgtatttagcgacgaattagtgtaatttggatcgtttatg 27187653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 33228410 - 33228471
Alignment:
Q  104 atggttcaaaataacattttatgtctttatctccgatccattgaagtctaatatttattaac 165  Q
    |||||| ||||||||||||||  ||||||  |||||||  ||||||||||||||||||||||    
T  33228410 atggttgaaaataacattttacatctttacgtccgatctgttgaagtctaatatttattaac 33228471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 40713697 - 40713656
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagaga 42  Q
    |||||||||||||||||||| ||||| |||||||||||||||    
T  40713697 ttcctttttctctctccattgattttgaccaatgaaaagaga 40713656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 41703404 - 41703445
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagaga 42  Q
    |||||||||||||||| |||| ||||||||||||||||||||    
T  41703404 ttcctttttctctctctattatttttaaccaatgaaaagaga 41703445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 1796568 - 1796612
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  1796568 ttcctttttctctctccattgtttttgaccaatgaaaagagagaa 1796612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7678817 - 7678861
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||| ||||||||||  |||||||||||||||||||||||    
T  7678817 ttcctttttttctctccattgtttttaaccaatgaaaagagagaa 7678861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 16011899 - 16011859
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  16011899 tttttctctctccattgtttttaaccaatgaaaagagagaa 16011859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 21273692 - 21273636
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    |||||||||||| |||  |||||||||||||||||||||||  || |||||||||||    
T  21273692 tttttctctctctattgtttttaaccaatgaaaagagagaaaagaaaagttgtcaca 21273636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 23258117 - 23258177
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||| ||||||  |||| ||||||||||||||||||   |||||||||||||    
T  23258117 ttcctttttctctttccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcaca 23258177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 28473531 - 28473487
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  28473531 ttcctttttctctctccattgttttttaccaatgaaaagagagaa 28473487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28927766 - 28927826
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||||||||||  |||| |||||||||||||||||    |||||||||||||    
T  28927766 ttcctttttctctctccattgtttttgaccaatgaaaagagagagaaaagaagttgtcaca 28927826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 87 - 167
Target Start/End: Original strand, 29671277 - 29671357
Alignment:
Q  87 attacatatttagattaatggttcaaaataacattttatgtctttatctccgatccattgaagtctaatatttattaacgt 167  Q
    ||||||| ||||| ||||||||| |||||||  |||||  ||||||| |  ||||||||||||| |||||| |||||||||    
T  29671277 attacatttttaggttaatggttaaaaataaatttttacatctttatgtttgatccattgaagtgtaatatatattaacgt 29671357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 31665976 - 31665932
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||| ||| |||| ||||||||||||||||||    
T  31665976 ttcctttttctctctcctttatttttgaccaatgaaaagagagaa 31665932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37524414 - 37524370
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  37524414 ttcctttttctctctccattgtttttgaccaatgaaaagagagaa 37524370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20473864 - 20473907
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagaga 44  Q
    ||||||||||| ||||||||  ||||||||||||||||||||||    
T  20473864 ttcctttttctgtctccattgtttttaaccaatgaaaagagaga 20473907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 21648917 - 21648874
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagaga 44  Q
    |||||||||||||||||| |  ||||||||||||||||||||||    
T  21648917 ttcctttttctctctccaatgtttttaaccaatgaaaagagaga 21648874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 34474034 - 34474077
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagaga 44  Q
    ||||||||||||||||||||  |||||||||||||||| |||||    
T  34474034 ttcctttttctctctccattgtttttaaccaatgaaaaaagaga 34474077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 40102108 - 40102151
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagaga 44  Q
    ||||||||||||||||||||  |||| |||||||||||||||||    
T  40102108 ttcctttttctctctccatttttttttaccaatgaaaagagaga 40102151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 45
Target Start/End: Original strand, 42689875 - 42689914
Alignment:
Q  6 ttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  42689875 ttttctctctccattgtttttaaccaatgaaaagagagaa 42689914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 44672214 - 44672175
Alignment:
Q  6 ttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  44672214 ttttctctctccattgtttttaaccaatgaaaagagagaa 44672175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 3988994 - 3989052
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacata 63  Q
    ||||||||||||||||  |||| || |||||||||||||||   |||||||||||||||    
T  3988994 tttttctctctccattgtttttgactaatgaaaagagagaaaaaagaagttgtcacata 3989052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 9001000 - 9000958
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagag 43  Q
    ||||||||||||||||||||  |||| ||||||||||||||||    
T  9001000 ttcctttttctctctccattgtttttgaccaatgaaaagagag 9000958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22836125 - 22836083
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagag 43  Q
    ||||||||||||||||||||  |||| ||||||||||||||||    
T  22836125 ttcctttttctctctccattgtttttgaccaatgaaaagagag 22836083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 33692806 - 33692848
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagag 43  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||    
T  33692806 ttcctttttttctctccattatttttgaccaatgaaaagagag 33692848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 3394685 - 3394644
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||||| |||||| |||||| |||||||||    
T  3394685 ctttttctctctccattatttttaatcaatgagaagagagaa 3394644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 9047052 - 9047015
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagaga 42  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  9047052 tttttctctctccattatttttaaccaataaaaagaga 9047015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 406
Target Start/End: Complemental strand, 24618673 - 24618590
Alignment:
Q  326 aatttgttaaatttggatcgattatgtgtgattatgtt---aaactggtgtaattcgggtcaattatgagagtgtaaaaattac 406  Q
    |||||||  ||||||||||| |||||||||||||||||   ||||| | ||||||| | ||||||||||| ||| ||| |||||    
T  24618673 aatttgtgtaatttggatcgtttatgtgtgattatgttgtgaaacttgcgtaattcagttcaattatgagtgtgcaaagattac 24618590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 24618673 - 24618640
Alignment:
Q  278 aatttgtgtaatttggatcgtttatgtgtaatta 311  Q
    ||||||||||||||||||||||||||||| ||||    
T  24618673 aatttgtgtaatttggatcgtttatgtgtgatta 24618640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 362
Target Start/End: Complemental strand, 24618873 - 24618828
Alignment:
Q  317 ttaacaacgaatttgttaaatttggatcgattatgtgtgattatgt 362  Q
    ||||| ||||||||||  ||||||||||| ||||||||||||||||    
T  24618873 ttaacgacgaatttgtgtaatttggatcgtttatgtgtgattatgt 24618828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 311
Target Start/End: Complemental strand, 27187636 - 27187587
Alignment:
Q  262 tgtgtatttaacaacgaatttgtgtaatttggatcgtttatgtgtaatta 311  Q
    |||||||||||  | |||||||||||||||||||| ||||||||| ||||    
T  27187636 tgtgtatttaatgatgaatttgtgtaatttggatcatttatgtgtcatta 27187587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 302
Target Start/End: Original strand, 32076613 - 32076646
Alignment:
Q  269 ttaacaacgaatttgtgtaatttggatcgtttat 302  Q
    ||||| ||||||||||||||||||||||||||||    
T  32076613 ttaacgacgaatttgtgtaatttggatcgtttat 32076646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 318
Target Start/End: Original strand, 33228491 - 33228591
Alignment:
Q  218 tcgaatttgtgtctctaactttgaatttgaatgaatttgtg-ttatgtgtatttaacaacgaatttgtgtaatttggatcgtttatgtgtaattacgtaa 316  Q
    |||||||||||||| ||   |||||||| |||||||||||| ||||||  ||||||| | ||||||| |||||||| | ||||||||||  |||| ||||    
T  33228491 tcgaatttgtgtctgtattattgaattttaatgaatttgtgtttatgt-aatttaacgatgaatttgggtaatttgaaccgtttatgtgagattatgtaa 33228589  T
Q  317 tt 318  Q
    ||    
T  33228590 tt 33228591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 238 - 305
Target Start/End: Complemental strand, 5015958 - 5015891
Alignment:
Q  238 ttgaatttgaatgaatttgtgttatgtgt-atttaacaacgaatttgtgtaatttggatcgtttatgtg 305  Q
    |||||||| |||||||||||||| ||||| ||||||| | ||||||| ||||||| || ||||||||||    
T  5015958 ttgaattttaatgaatttgtgtt-tgtgtaatttaacgatgaatttgggtaattttgaccgtttatgtg 5015891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 479 - 547
Target Start/End: Original strand, 5155442 - 5155510
Alignment:
Q  479 ttaagtcacgttgaatttaatacctgcgtgacttaagtaatgttgaaggtatttttatcggtttgtatg 547  Q
    ||||||||||||| || ||| ||||||||||||||||  | || |||||||||||  || |||||||||    
T  5155442 ttaagtcacgttggatataacacctgcgtgacttaagacacgtggaaggtattttcgtcagtttgtatg 5155510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 6005029 - 6005073
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||| ||||||||||  |||| ||||||||||||||||||    
T  6005029 ttcctttttttctctccattgtttttgaccaatgaaaagagagaa 6005073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 6825263 - 6825219
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  ||||||||||| | |||||||||    
T  6825263 ttcctttttctctctccattgtttttaaccaataagaagagagaa 6825219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 9963775 - 9963815
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||| ||||||  |||||||||||||||||||||||    
T  9963775 tttttctctttccattgtttttaaccaatgaaaagagagaa 9963815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 14548811 - 14548767
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| |||||||| |||||||||    
T  14548811 ttcctttttctctctccattgttttttaccaatgagaagagagaa 14548767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24946087 - 24946131
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| |||||||||||| |||||    
T  24946087 ttcctttttctctctccattgtttttgaccaatgaaaagtgagaa 24946131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 30944924 - 30944991
Alignment:
Q  196 aacgtgtaataatgtattgtgttcgaatttgtgtctctaactttgaatttgaatgaatttgtgttatgt 264  Q
    ||||||||||| |||| ||| ||| ||||||||||  |||  |||||||| ||||||||||||||||||    
T  30944924 aacgtgtaatagtgtaatgttttc-aatttgtgtccgtaatgttgaatttaaatgaatttgtgttatgt 30944991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40719630 - 40719586
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||| |||| |||| |||||| |||||||||||    
T  40719630 ttcctttttctctctctattatttttgaccaatcaaaagagagaa 40719586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 42941669 - 42941613
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||||||| || |||||||| ||||| |||||   |||||||||||||    
T  42941669 tttttctctctccattatttctaaccaataaaaagtgagaaaaaagaagttgtcaca 42941613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 43587726 - 43587770
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| |||||| |||||||||||    
T  43587726 ttcctttttctctctccattgctttttaccaatcaaaagagagaa 43587770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 45101481 - 45101525
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||| |||||||  ||||| |||||||||||||||||    
T  45101481 ttcctttttctccctccattgtttttatccaatgaaaagagagaa 45101525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 5e-33; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 269 - 412
Target Start/End: Complemental strand, 38810166 - 38810020
Alignment:
Q  269 ttaacaacgaatttgtgtaatttggatcgtttatgtgtaattacgtaattaacaacgaatttgttaaatttggatcgattatgtgtgatta---tgttaa 365  Q
    ||||| || ||||||||||||||||||||||||||||| |||  || |||||| |||||||||| ||||||||||||||||||||||||||   ||||||    
T  38810166 ttaacgacaaatttgtgtaatttggatcgtttatgtgtgattgtgtgattaacgacgaatttgtgaaatttggatcgattatgtgtgattatgttgttaa 38810067  T
Q  366 actggtgtaattcgggtcaattatgagagtgtaaaaattacaaatca 412  Q
    |||||||||||||   |||||||| || ||||||| |||| ||||||    
T  38810066 actggtgtaattcaaatcaattataagtgtgtaaagattagaaatca 38810020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 195 - 311
Target Start/End: Complemental strand, 38810309 - 38810192
Alignment:
Q  195 taacgtgtaataatgtattgtgttcgaatttgtgtctctaactttgaatttgaatgaatttgtgttatgtgt-atttaacaacgaatttgtgtaatttgg 293  Q
    |||| ||||||| |||| |||||||||||||||| ||  ||  |||||||| |||||||||||||||||||| ||||||| |  |||||||||||||||     
T  38810309 taacatgtaatagtgtaatgtgttcgaatttgtgcctgcaatgttgaattttaatgaatttgtgttatgtgtaatttaacgataaatttgtgtaatttga 38810210  T
Q  294 atcgtttatgtgtaatta 311  Q
    ||||||||||||| ||||    
T  38810209 atcgtttatgtgtcatta 38810192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 34187349 - 34187411
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacata 63  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||  ||||||||||||||||    
T  34187349 ttcctttttctctctccattgattttgaccaatgaaaagagagaaaagagaagttgtcacata 34187411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 14002724 - 14002684
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  14002724 tttttctctctccattatttttaaccaatgaaaagagagaa 14002684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22389511 - 22389451
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||   |||||||||||||    
T  22389511 ttcctttttctttctccattatttttgaccaatgaaaagagagaaaaaagaagttgtcaca 22389451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 25061818 - 25061862
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  25061818 ttcctttttctctctccattgtttttaaccaatgaaaagagagaa 25061862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 30439335 - 30439379
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||||||| || |||||||||||||||||||||    
T  30439335 ttcctttttctctctccattgatcttaaccaatgaaaagagagaa 30439379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 49425822 - 49425866
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  49425822 ttcctttttctctctccattgtttttaaccaatgaaaagagagaa 49425866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 25302631 - 25302569
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacata 63  Q
    |||||||||||||||| |||  |||||||||||||||||||||||   | |||||||||||||    
T  25302631 ttcctttttctctctctattgtttttaaccaatgaaaagagagaaaaaaaaagttgtcacata 25302569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 50659178 - 50659116
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacata 63  Q
    ||||||||||||||||||||  |||| |||||||||||||||||    |||||||||||||||    
T  50659178 ttcctttttctctctccattgtttttgaccaatgaaaagagagagaaaagaagttgtcacata 50659116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 4604614 - 4604658
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  4604614 ttcctttttctctctccattgtttttgaccaatgaaaagagagaa 4604658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 8391320 - 8391280
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  8391320 tttttctctctccattatttttatccaatgaaaagagagaa 8391280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 23554836 - 23554880
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  ||||||||||||||| |||||||    
T  23554836 ttcctttttctctctccattgtttttaaccaatgaaaggagagaa 23554880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25098774 - 25098730
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  25098774 ttcctttttctctctccattgtttttgaccaatgaaaagagagaa 25098730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27352715 - 27352759
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  27352715 ttcctttttctctctccattgtttttgaccaatgaaaagagagaa 27352759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 31290194 - 31290134
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||||||||||  |||||||||||||||| ||||||   | |||||||||||    
T  31290194 ttcctttttctctctccattgtttttaaccaatgaaaaaagagaaaaaataagttgtcaca 31290134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35043706 - 35043662
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||| ||||||||||| ||||||||||| |||||||||||    
T  35043706 ttcctttttatctctccattatttttaaccaataaaaagagagaa 35043662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 39010899 - 39010959
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||   | |||||||||||    
T  39010899 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcaca 39010959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40596040 - 40595996
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  40596040 ttcctttttctctctccattgtttttgaccaatgaaaagagagaa 40595996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 40610314 - 40610374
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||||||||||  |||| |||||||||||||||||    |||||||||||||    
T  40610314 ttcctttttctctctccattgtttttgaccaatgaaaagagagagaaaagaagttgtcaca 40610374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 43612068 - 43612024
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  43612068 ttcctttttctctctccattgtttttgaccaatgaaaagagagaa 43612024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 45272146 - 45272102
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||| ||||||||  |||||||||||||||||||||||    
T  45272146 ttcctttttctatctccattgtttttaaccaatgaaaagagagaa 45272102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 47059876 - 47059832
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  47059876 ttcctttttctctctccattgtttttgaccaatgaaaagagagaa 47059832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 48872464 - 48872508
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  48872464 ttcctttttctctctccattgtttttgaccaatgaaaagagagaa 48872508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 50528043 - 50527999
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  50528043 ttcctttttctctctccattgtttttgaccaatgaaaagagagaa 50527999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 51339686 - 51339642
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  51339686 ttcctttttctctctccattgtttttgaccaatgaaaagagagaa 51339642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 25818599 - 25818662
Alignment:
Q  104 atggttcaaaataacattttatgtctttatctccgatccattgaagtctaatatttattaacgt 167  Q
    |||||| |||||||| |||||  ||||||| |||||||| ||||||| | ||||||||||||||    
T  25818599 atggttgaaaataaccttttacatctttatgtccgatccgttgaagtgtgatatttattaacgt 25818662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28253100 - 28253143
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagaga 44  Q
    ||||||||||||||||||||  |||| |||||||||||||||||    
T  28253100 ttcctttttctctctccattgtttttgaccaatgaaaagagaga 28253143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 43640972 - 43640929
Alignment:
Q  2 tcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||||||  |||| ||||||||||||||||||    
T  43640972 tcctttttctctctccattgtttttgaccaatgaaaagagagaa 43640929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 276 - 314
Target Start/End: Complemental strand, 33401867 - 33401829
Alignment:
Q  276 cgaatttgtgtaatttggatcgtttatgtgtaattacgt 314  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  33401867 cgaatttgtgaaatttggatcgtttatgtgtgattacgt 33401829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 1181137 - 1181170
Alignment:
Q  278 aatttgtgtaatttggatcgtttatgtgtaatta 311  Q
    ||||||||||||||||||||||||||||| ||||    
T  1181137 aatttgtgtaatttggatcgtttatgtgtcatta 1181170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 5477146 - 5477089
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    |||||||||||||||||  |||| |||||| |||||||||||   |||||||||||||    
T  5477146 ctttttctctctccattgtttttgaccaataaaaagagagaaaaaagaagttgtcaca 5477089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 12067639 - 12067672
Alignment:
Q  278 aatttgtgtaatttggatcgtttatgtgtaatta 311  Q
    ||||||||||||||||||||||||||||| ||||    
T  12067639 aatttgtgtaatttggatcgtttatgtgtcatta 12067672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 16836100 - 16836016
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacatatggttgctcaaatatcactactc 86  Q
    ||||||||| ||||||||||  |||| ||||||||||||  ||||   ||||||||||||| |  |||| ||||||||||||||||    
T  16836100 ttcctttttttctctccattgtttttgaccaatgaaaagtaagaaaaaagaagttgtcaca-aaagttgttcaaatatcactactc 16836016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 16987535 - 16987576
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||||  |||| ||||||||||||||||||    
T  16987535 ctttttctctctccattgtttttgaccaatgaaaagagagaa 16987576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 31427943 - 31427906
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaa 38  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  31427943 ttcctttttctctctccattatttttgaccaatgaaaa 31427906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 31436905 - 31436946
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagaga 42  Q
    ||||||||||||||||||||  |||| |||||||||||||||    
T  31436905 ttcctttttctctctccattgtttttgaccaatgaaaagaga 31436946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 38810376 - 38810335
Alignment:
Q  87 attacatatttagattaatggttcaaaataacattttatgtc 128  Q
    ||||||| ||||| ||||||||||||||||||| ||||||||    
T  38810376 attacatgtttaggttaatggttcaaaataacactttatgtc 38810335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 50797865 - 50797906
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagaga 42  Q
    ||||||||||||||||||||| |||| |||||| ||||||||    
T  50797865 ttcctttttctctctccattatttttgaccaataaaaagaga 50797906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 4618729 - 4618773
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||| ||||||||||| |||| ||||||||||| ||||||    
T  4618729 ttcctttttttctctccattatttttgaccaatgaaaaaagagaa 4618773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 8464499 - 8464455
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||| |||  |||||| |||||||||||    
T  8464499 ttcctttttctctctccattattttggaccaataaaaagagagaa 8464455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15061930 - 15061974
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  ||||| ||||| |||||||||||    
T  15061930 ttcctttttctctctccattgtttttatccaataaaaagagagaa 15061974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 17167934 - 17167978
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||| |||  |||| ||||||||||||||||||    
T  17167934 ttcctttttctctctctattgttttttaccaatgaaaagagagaa 17167978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 17526509 - 17526549
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||| |||| |||||| |||||||||||    
T  17526509 tttttctctctccattatttttgaccaataaaaagagagaa 17526549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 25995545 - 25995589
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| |||||| |||||||||||    
T  25995545 ttcctttttctctctccattgtttttgaccaataaaaagagagaa 25995589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 29294033 - 29294077
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||| |||||||||||  ||||| ||||||||||||||||||    
T  29294033 ttcctttctctctctccatcgattttgaccaatgaaaagagagaa 29294077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 30530556 - 30530516
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||  |||| ||||||||||||||||||    
T  30530556 tttttctctctccattgtttttgaccaatgaaaagagagaa 30530516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30631831 - 30631787
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| |||||||||||| |||||    
T  30631831 ttcctttttctctctccattgtttttgaccaatgaaaagtgagaa 30631787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35846305 - 35846261
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| |||||||||||| |||||    
T  35846305 ttcctttttctctctccattgtttttgaccaatgaaaagtgagaa 35846261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36669356 - 36669312
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||| |||| |||||| | |||||||||    
T  36669356 ttcctttttctctctccattatttttgaccaataagaagagagaa 36669312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 37516001 - 37516041
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||| ||||||||||||  ||||||||||||||||||||||    
T  37516001 ttttcctctctccattatatttaaccaatgaaaagagagaa 37516041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 37843414 - 37843374
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||| |||||||  |||||||||||||||||||||||    
T  37843414 tttttctcactccattgtttttaaccaatgaaaagagagaa 37843374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37947206 - 37947162
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| |||||||| |||||||||    
T  37947206 ttcctttttctctctccattgtttttgaccaatgagaagagagaa 37947162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 43105194 - 43105234
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||| |||| |||||| |||||||||||    
T  43105194 tttttctctctccattatttttgaccaataaaaagagagaa 43105234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 43196075 - 43196031
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| |||||| |||||||||||    
T  43196075 ttcctttttctctctccattgtttttgaccaatcaaaagagagaa 43196031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 44730729 - 44730773
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||| ||  |||||||||||||||| ||||||    
T  44730729 ttcctttttctctctcctttgtttttaaccaatgaaaaaagagaa 44730773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 48325307 - 48325351
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| |||||||| |||||||||    
T  48325307 ttcctttttctctctccattgtttttgaccaatgagaagagagaa 48325351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 1e-21; HSPs: 69)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 194 - 302
Target Start/End: Original strand, 6374850 - 6374959
Alignment:
Q  194 ttaacgtgtaataatgtattgtgttcgaatttgtgtctctaactttgaatttgaatgaatttgtgttatgtgt-atttaacaacgaatttgtgtaatttg 292  Q
    |||| |||||||| |||| ||||||||||||| ||||  |||  |||||||| ||| |||||||||||||||| ||||||  ||||||||||||||||||    
T  6374850 ttaatgtgtaatagtgtaatgtgttcgaatttatgtcagtaatgttgaattttaataaatttgtgttatgtgtaatttaatgacgaatttgtgtaatttg 6374949  T
Q  293 gatcgtttat 302  Q
    ||||||||||    
T  6374950 gatcgtttat 6374959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 217 - 305
Target Start/End: Original strand, 16109654 - 16109745
Alignment:
Q  217 ttcgaatttgtgtctctaactttgaatttgaatgaatttgtgttatgtgt-atttaacaacgaatttgtgtaat--ttggatcgtttatgtg 305  Q
    ||||||||||||||| |||  |||||||| |||||||||||||||||||| ||||||| | |||||||||||||  ||||||||||||||||    
T  16109654 ttcgaatttgtgtctgtaatgttgaattttaatgaatttgtgttatgtgtaatttaacgatgaatttgtgtaatagttggatcgtttatgtg 16109745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 8736378 - 8736267
Alignment:
Q  194 ttaacgtgtaataatgtattgtgttcgaatttgtgtctctaactttgaatttgaatgaatttgtgttatgtgt-atttaacaacgaatttgtgtaatttg 292  Q
    |||||||||||||||||| || |||||||||||||| | |||  |||||||| |||||||||||||||| ||| ||||||| |  ||||||| ||| |||    
T  8736378 ttaacgtgtaataatgtaatgcgttcgaatttgtgtttgtaatgttgaattttaatgaatttgtgttatatgtaatttaacgaaaaatttgtataacttg 8736279  T
Q  293 gatcgtttatgt 304  Q
    |||| |||||||    
T  8736278 gatcatttatgt 8736267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 10232584 - 10232643
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcac 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||    
T  10232584 ttcctttttctctctccattaattttaaccaatgaaaagagagaaaaaagaagttgtcac 10232643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 12661933 - 12661874
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcac 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||    
T  12661933 ttcctttttctctctccattaattttaaccaatgaaaagagagaaaaaagaagttgtcac 12661874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 42909804 - 42909890
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacatatggttgctcaaatatcactactca 87  Q
    ||||||||||||||||||||  |||| |||||||||||||||||    |||||||||| |||||||||| ||||||| |||||||||    
T  42909804 ttcctttttctctctccattgtttttgaccaatgaaaagagagagaaaagaagttgtctcatatggttgttcaaataacactactca 42909890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 215 - 311
Target Start/End: Original strand, 28197020 - 28197116
Alignment:
Q  215 tgttcgaatttgtgtctctaactttgaatttgaatgaatttgtgttatgtgtatttaacaacgaatttgtgtaatttggatcgtttatgtgtaatta 311  Q
    |||| |||||||||| | |||  ||| |||| ||||||||||||   | ||||||| || |||||||||||||||||||||||||||||||||||||    
T  28197020 tgtttgaatttgtgtatgtaatgttgcattttaatgaatttgtggactatgtatttgacgacgaatttgtgtaatttggatcgtttatgtgtaatta 28197116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 267 - 362
Target Start/End: Complemental strand, 8736248 - 8736153
Alignment:
Q  267 atttaacaacgaatttgtgtaatttggatcgtttatgtgtaattacgtaattaacaacgaatttgttaaatttggatcgattatgtgtgattatgt 362  Q
    ||||||| || ||||||||||||||| ||||||||||||| |||  || |||||| ||||||||||  ||||| ||||| ||||||| ||||||||    
T  8736248 atttaacgacaaatttgtgtaatttgaatcgtttatgtgtgattgtgtgattaacgacgaatttgtgtaattttgatcgtttatgtgcgattatgt 8736153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 8736449 - 8736362
Alignment:
Q  90 acatatttagattaatggttcaaaataacattttatgtctttatctccgatccattgaagtctaatatttattaacgtgtcataatgt 177  Q
    |||||||||| ||||||||| ||||||||||||||  | ||||| || ||| ||| ||||| |||||||||||||||||| |||||||    
T  8736449 acatatttaggttaatggttgaaaataacattttacatttttatgtctgattcatcgaagtgtaatatttattaacgtgtaataatgt 8736362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 194 - 288
Target Start/End: Original strand, 16109555 - 16109650
Alignment:
Q  194 ttaacgtgtaataatgtattgtgttcgaatttgtgtctctaactttgaatttgaatgaatttgtgttatgtgt-atttaacaacgaatttgtgtaa 288  Q
    |||| |||||||  |||| ||| ||||||||||||||| |||  |||||||| |||||||||||||||||||| ||||||| | ||||||||||||    
T  16109555 ttaaagtgtaattgtgtaatgttttcgaatttgtgtctgtaatgttgaattttaatgaatttgtgttatgtgtaatttaacgatgaatttgtgtaa 16109650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 5130364 - 5130304
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||||||||||  |||||||||||||||||||||||   |||||||||||||    
T  5130364 ttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtcaca 5130304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 471902 - 471984
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacatatggttgctcaaatatcactactc 86  Q
    |||||||||||||||||  |||| | ||||||||||||||||   |||||||||| |||||| ||| ||||||| ||||||||    
T  471902 ctttttctctctccattgtttttgatcaatgaaaagagagaaaaaagaagttgtctcatatgattgttcaaataacactactc 471984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 6374776 - 6374858
Alignment:
Q  87 attacatatttagattaatggttcaaaataacattttatgtctttatctccgatccattgaagtctaatatttattaacgtgt 169  Q
    ||||||| ||||| ||||||||| ||||||| ||||||  ||||||| || ||||| ||||||| ||||||||||||| ||||    
T  6374776 attacatgtttaggttaatggttaaaaataatattttacatctttatgtctgatccgttgaagtgtaatatttattaatgtgt 6374858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 19376118 - 19376056
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacata 63  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||   |||||||||||||||    
T  19376118 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacata 19376056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 87 - 165
Target Start/End: Original strand, 33937152 - 33937230
Alignment:
Q  87 attacatatttagattaatggttcaaaataacattttatgtctttatctccgatccattgaagtctaatatttattaac 165  Q
    ||||||| ||||||||||||||| ||||||| ||||||  ||||||| | || || |||||||| ||||||||||||||    
T  33937152 attacatgtttagattaatggttgaaaataatattttacttctttatgttcggtctattgaagtgtaatatttattaac 33937230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 262 - 311
Target Start/End: Complemental strand, 18263367 - 18263318
Alignment:
Q  262 tgtgtatttaacaacgaatttgtgtaatttggatcgtttatgtgtaatta 311  Q
    |||||||||||| |||||||| |||||||||||||| |||||||||||||    
T  18263367 tgtgtatttaacgacgaatttatgtaatttggatcgattatgtgtaatta 18263318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 194 - 267
Target Start/End: Original strand, 33937226 - 33937299
Alignment:
Q  194 ttaacgtgtaataatgtattgtgttcgaatttgtgtctctaactttgaatttgaatgaatttgtgttatgtgta 267  Q
    ||||| ||||||| |||| ||||||| ||||||| ||| |||  |||||||| |||||||||||||||||||||    
T  33937226 ttaacatgtaatagtgtaatgtgttcaaatttgtctctgtaatgttgaattttaatgaatttgtgttatgtgta 33937299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 104 - 169
Target Start/End: Original strand, 38740008 - 38740073
Alignment:
Q  104 atggttcaaaataacattttatgtctttatctccgatccattgaagtctaatatttattaacgtgt 169  Q
    |||||| |||||||  |||||  ||||||| |||||||| ||||||||||||||||||||||||||    
T  38740008 atggttgaaaataatcttttacatctttatgtccgatccgttgaagtctaatatttattaacgtgt 38740073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 39595359 - 39595419
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||   |||||||||||||    
T  39595359 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcaca 39595419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12910869 - 12910912
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagaga 44  Q
    |||||||||||||| |||||| ||||||||||||||||||||||    
T  12910869 ttcctttttctctcaccattatttttaaccaatgaaaagagaga 12910912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 17063950 - 17063993
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagaga 44  Q
    ||||||||||||||||||||  ||||||||||||||||||||||    
T  17063950 ttcctttttctctctccattgtttttaaccaatgaaaagagaga 17063993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 363
Target Start/End: Original strand, 6375049 - 6375143
Alignment:
Q  269 ttaacaacgaatttgtgtaatttggatcgtttatgtgtaattacgtaattaacaacgaatttgttaaatttggatcgattatgtgtgattatgtt 363  Q
    ||||| || ||||||| |||||| |||||||||||||| |||| || |||||| |  |||||||  ||||| ||||| ||||||| |||||||||    
T  6375049 ttaacgacaaatttgtctaatttagatcgtttatgtgtgattatgttattaacgataaatttgtgtaatttagatcgtttatgtgcgattatgtt 6375143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 29402267 - 29402329
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacata 63  Q
    |||||||||||||||||||| ||||| |||||| |||||| ||||   |||||||||||||||    
T  29402267 ttcctttttctctctccattgattttgaccaataaaaagaaagaaaaaagaagttgtcacata 29402329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 33910070 - 33910012
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacata 63  Q
    ||||||||||||||||| |||||| |||||||||||||||    |||||||||||||||    
T  33910070 tttttctctctccattatttttaatcaatgaaaagagagagaaaagaagttgtcacata 33910012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 33937407 - 33937449
Alignment:
Q  269 ttaacaacgaatttgtgtaatttggatcgtttatgtgtaatta 311  Q
    ||||| |||||||||||||||||||||||||||||||| ||||    
T  33937407 ttaacgacgaatttgtgtaatttggatcgtttatgtgtcatta 33937449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 2863634 - 2863675
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagaga 42  Q
    ||||||||||||||||||||| |||| |||||||||||||||    
T  2863634 ttcctttttctctctccattatttttgaccaatgaaaagaga 2863675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 12349866 - 12349907
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagaga 42  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  12349866 ttcctttttctctctccattgattttaactaatgaaaagaga 12349907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 194 - 318
Target Start/End: Original strand, 17344428 - 17344552
Alignment:
Q  194 ttaacgtgtaataatgtattgtgttcgaatttgtgtctctaactttgaatttgaatgaatttgt-gttatgtgtatttaacaacgaatttgtgtaatttg 292  Q
    |||||||||||||  ||| | ||||||||||||||||| ||   |||||||| ||||||||||| ||||| |  ||||||| | |||||||||||||||     
T  17344428 ttaacgtgtaatatcgtaatttgttcgaatttgtgtctgtattgttgaattttaatgaatttgtggttatat-aatttaacgatgaatttgtgtaatttt 17344526  T
Q  293 gatcgtttatgtgtaattacgtaatt 318  Q
    || | ||||||||  |||| ||||||    
T  17344527 gaccatttatgtgagattatgtaatt 17344552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 262 - 295
Target Start/End: Original strand, 20421576 - 20421609
Alignment:
Q  262 tgtgtatttaacaacgaatttgtgtaatttggat 295  Q
    ||||||||||||||||||||||||||||||||||    
T  20421576 tgtgtatttaacaacgaatttgtgtaatttggat 20421609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 20719998 - 20719941
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    |||||||||||||||||| |||| |||||||||||||||||    |||||||||||||    
T  20719998 ctttttctctctccattatttttgaccaatgaaaagagagagaaaagaagttgtcaca 20719941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 33243724 - 33243683
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  33243724 ctttttctctctccattgtttttaaccaatgaaaagagagaa 33243683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 7077325 - 7077281
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||| |||| |||||| |||||||||||    
T  7077325 ttcctttttctctctccattatttttgaccaatcaaaagagagaa 7077281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 9636144 - 9636100
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  9636144 ttcctttttctctctccattgtttttgaccaatgaaaagagagaa 9636100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 13613946 - 13613906
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  13613946 tttttctctctccattgtttttaaccaatgaaaagagagaa 13613906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 31284377 - 31284337
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagaga 44  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  31284377 ctttttctctctccattgtttttaaccaatgaaaagagaga 31284337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 34381097 - 34381141
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  34381097 ttcctttttctctctccattgtttttgaccaatgaaaagagagaa 34381141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 34767399 - 34767343
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||||||| |||| |||||||||||||||||    |||||||||||||    
T  34767399 tttttctctctccattatttttgaccaatgaaaagagagagaaaagaagttgtcaca 34767343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 41460205 - 41460245
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  41460205 tttttctctctccattgtttttaaccaatgaaaagagagaa 41460245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 14206478 - 14206517
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagaga 44  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  14206478 tttttctctctccattgtttttaaccaatgaaaagagaga 14206517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 14647646 - 14647684
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaag 39  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  14647646 ttcctttttctctctccattatttttaaccaataaaaag 14647684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 21575798 - 21575716
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacatatggttgctcaaatatcactactc 86  Q
    ||||||||||||| |||  |||  ||||||||||||| ||||   |||||||||| || ||||||| |||||||||| |||||    
T  21575798 ctttttctctctctattgttttccaccaatgaaaagaaagaaaatagaagttgtctcaaatggttgttcaaatatcattactc 21575716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 31329108 - 31329050
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacata 63  Q
    |||||||||||| ||| ||||| | ||||||||||||| |||  |||||||||||||||    
T  31329108 tttttctctctctattgattttgatcaatgaaaagagaaaataaagaagttgtcacata 31329050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 276 - 314
Target Start/End: Complemental strand, 34016431 - 34016393
Alignment:
Q  276 cgaatttgtgtaatttggatcgtttatgtgtaattacgt 314  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  34016431 cgaatttgtgaaatttggatcgtttatgtgtgattacgt 34016393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 2117619 - 2117566
Alignment:
Q  8 ttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    |||||||||||||  |||||||||||||||| ||||||   |||||||||||||    
T  2117619 ttctctctccattgtttttaaccaatgaaaaaagagaaaaaagaagttgtcaca 2117566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 6865770 - 6865729
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||||  |||| ||||||||||||||||||    
T  6865770 ctttttctctctccattgtttttgaccaatgaaaagagagaa 6865729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8087884 - 8087957
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacatatggttgctcaa 74  Q
    ||||||| ||||||||||||  |||| ||||||||||||||||||   |||| ||||| ||| |||||| ||||    
T  8087884 ttcctttgtctctctccattgtttttgaccaatgaaaagagagaagaaagaaattgtctcatttggttgttcaa 8087957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 11666267 - 11666308
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||||  |||| ||||||||||||||||||    
T  11666267 ctttttctctctccattgtttttgaccaatgaaaagagagaa 11666308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 169
Target Start/End: Original strand, 16109482 - 16109563
Alignment:
Q  88 ttacatatttagattaatggttcaaaataacattttatgtctttatctccgatccattgaagtctaatatttattaacgtgt 169  Q
    ||||||||||||  | |||||| | |||||||||||   ||||||| || ||||| ||||||| ||||||||||||| ||||    
T  16109482 ttacatatttagcgtgatggttgagaataacattttccatctttatgtctgatccgttgaagtgtaatatttattaaagtgt 16109563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 169
Target Start/End: Original strand, 17344371 - 17344436
Alignment:
Q  104 atggttcaaaataacattttatgtctttatctccgatccattgaagtctaatatttattaacgtgt 169  Q
    |||||| ||||||||| |||   ||||||  || ||||||||||||| ||||||||||||||||||    
T  17344371 atggttgaaaataacactttgaatctttacgtctgatccattgaagtgtaatatttattaacgtgt 17344436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 169
Target Start/End: Complemental strand, 20883594 - 20883529
Alignment:
Q  104 atggttcaaaataacattttatgtctttatctccgatccattgaagtctaatatttattaacgtgt 169  Q
    |||||| |||||||| |||||  ||||||| ||| |||| ||||| | ||||||||||||||||||    
T  20883594 atggttgaaaataaccttttacatctttatgtccaatccgttgaaatttaatatttattaacgtgt 20883529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 25038165 - 25038206
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagaga 42  Q
    |||||||||||||||| |||| ||||||||||| ||||||||    
T  25038165 ttcctttttctctctctattatttttaaccaatcaaaagaga 25038206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 318
Target Start/End: Complemental strand, 26506117 - 26505993
Alignment:
Q  194 ttaacgtgtaataatgtattgtgttcgaatttgtgtctctaactttgaatttgaatgaatttgtg-ttatgtgtatttaacaacgaatttgtgtaatttg 292  Q
    ||||| ||||||| |||| | ||||||||||||| ||  ||   |||||||| |||||||||||| |||||| |||||||| | ||||||||||| |||     
T  26506117 ttaacatgtaatagtgtaatttgttcgaatttgtatccgtattgttgaattttaatgaatttgtgtttatgt-tatttaacgatgaatttgtgtattttt 26506019  T
Q  293 gatcgtttatgtgtaattacgtaatt 318  Q
     | ||||||||||  |||| ||||||    
T  26506018 taccgtttatgtgagattatgtaatt 26505993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 363
Target Start/End: Original strand, 28197190 - 28197292
Alignment:
Q  269 ttaacaacgaatttgtgtaatttggatcgtttatgtgtaattacgtaatt--------aacaacgaatttgttaaatttggatcgattatgtgtgattat 360  Q
    ||||| ||||||||||||||||| |||| ||||||||| |||| || |||        ||  ||||||||||  |||||||||||||||||| |||||||    
T  28197190 ttaacgacgaatttgtgtaatttagatcatttatgtgtgattatgtgattgtgtaatcaatgacgaatttgtgtaatttggatcgattatgtatgattat 28197289  T
Q  361 gtt 363  Q
    |||    
T  28197290 gtt 28197292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 169
Target Start/End: Complemental strand, 35049399 - 35049334
Alignment:
Q  104 atggttcaaaataacattttatgtctttatctccgatccattgaagtctaatatttattaacgtgt 169  Q
    |||||| |||||||  |||||  ||||||| |||||||| ||||||| ||||||||||||| ||||    
T  35049399 atggttgaaaataatcttttacatctttatgtccgatccgttgaagtgtaatatttattaatgtgt 35049334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 91300 - 91344
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||| ||||  |||| ||||||||||||||||||    
T  91300 ttcctttttctctcttcattgtttttgaccaatgaaaagagagaa 91344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 4434560 - 4434600
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||  |||||||||||||||| ||||||    
T  4434560 tttttctctctccattgtttttaaccaatgaaaaaagagaa 4434600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 7927440 - 7927480
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||| ||||| ||||| |||||||||||||||||||||||    
T  7927440 tttttttctcttcattatttttaaccaatgaaaagagagaa 7927480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 10522860 - 10522904
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||| |||| |||||| | |||||||||    
T  10522860 ttcctttttctctctccattatttttgaccaataagaagagagaa 10522904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11767976 - 11767932
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  ||| ||||||||||||| |||||    
T  11767976 ttcctttttctctctccatttttttaaaccaatgaaaagtgagaa 11767932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 12718366 - 12718306
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||||||||||  |||| ||||||||||||| |||    |||||||||||||    
T  12718366 ttcctttttctctctccattgtttttgaccaatgaaaagaaagagaaaagaagttgtcaca 12718306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 12779592 - 12779532
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||||||||||  |||| ||||||||||||| |||    |||||||||||||    
T  12779592 ttcctttttctctctccattgtttttgaccaatgaaaagaaagagaaaagaagttgtcaca 12779532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 13734342 - 13734302
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||  |||| ||||||||||||||||||    
T  13734342 tttttctctctccattgtttttgaccaatgaaaagagagaa 13734302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 311
Target Start/End: Original strand, 16109773 - 16109809
Alignment:
Q  275 acgaatttgtgtaatttggatcgtttatgtgtaatta 311  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  16109773 acgaattggtgtaatttggatcgtttatgtgtcatta 16109809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 24431604 - 24431560
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||||| |   ||||||||||||||||||||||    
T  24431604 ttcctttttctctctccaatgtgtttaaccaatgaaaagagagaa 24431560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24792538 - 24792581
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  24792538 ttcctttttctctctccatt-gttttgaccaatgaaaagagagaa 24792581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 28811517 - 28811557
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||  |||| ||||||||||||||||||    
T  28811517 tttttctctctccattgtttttgaccaatgaaaagagagaa 28811557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 40566199 - 40566159
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||  |||| ||||||||||||||||||    
T  40566199 tttttctctctccattgtttttgaccaatgaaaagagagaa 40566159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 41192672 - 41192716
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| |||||| |||||||||||    
T  41192672 ttcctttttctctctccattgtttttgaccaatcaaaagagagaa 41192716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 43153046 - 43153002
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| |||||||| |||||||||    
T  43153046 ttcctttttctctctccattgtttttgaccaatgagaagagagaa 43153002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 2e-17; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 41784827 - 41784909
Alignment:
Q  87 attacatatttagattaatggttcaaaataacattttatgtctttatctccgatccattgaagtctaatatttattaacgtgt 169  Q
    ||||||| ||||| ||||||||| ||||||||||||||  ||||||| || ||||||||||||| |||||||||| |||||||    
T  41784827 attacatgtttagtttaatggttgaaaataacattttacatctttatgtctgatccattgaagtgtaatatttatgaacgtgt 41784909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 196 - 267
Target Start/End: Original strand, 41784903 - 41784974
Alignment:
Q  196 aacgtgtaataatgtattgtgttcgaatttgtgtctctaactttgaatttgaatgaatttgtgttatgtgta 267  Q
    ||||||||||| |||| ||||||||||||||||||  |||  |||||||| |||||||||||||||||||||    
T  41784903 aacgtgtaatagtgtaatgtgttcgaatttgtgtccttaatgttgaatttaaatgaatttgtgttatgtgta 41784974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 46794487 - 46794401
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacatatggttgctcaaatatcactactcatt 89  Q
    ||||||||||||||||||||  |||| ||||||||||||||| ||   |||||||||| ||| |||||| ||||||| |||||||||||    
T  46794487 ttcctttttctctctccattgtttttgaccaatgaaaagagaaaa--aagaagttgtctcatttggttgttcaaataacactactcatt 46794401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 36792417 - 36792460
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagaga 44  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  36792417 ttcctttttctctctccattatttttaaccaatgaaaagagaga 36792460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 51717270 - 51717208
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacata 63  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||   |||| ||||||||||    
T  51717270 ttcctttttctctctccattgattttgaccaatgaaaagagagaaaaaagaaattgtcacata 51717208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 1938792 - 1938853
Alignment:
Q  104 atggttcaaaataacattttatgtctttatctccgatccattgaagtctaatatttattaac 165  Q
    |||||| |||||||| |||||  ||||||| |||||||||||||||| ||||||||||||||    
T  1938792 atggttgaaaataaccttttacatctttatgtccgatccattgaagtgtaatatttattaac 1938853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 9162151 - 9162211
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||   |||||||||||||    
T  9162151 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcaca 9162211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 54036515 - 54036471
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  54036515 ttcctttttctctctccattgtttttaaccaatgaaaagagagaa 54036471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 940256 - 940217
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaaga 40  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  940256 ttcctttttctctctccattatttttaaccaatgaaaaga 940217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6953374 - 6953331
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagaga 44  Q
    ||||||||||||||||||||  ||||||||||||||||||||||    
T  6953374 ttcctttttctctctccattgtttttaaccaatgaaaagagaga 6953331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 479 - 533
Target Start/End: Original strand, 43138668 - 43138722
Alignment:
Q  479 ttaagtcacgttgaatttaatacctgcgtgacttaagtaatgttgaaggtatttt 533  Q
    ||||||||||||| |||||| || |||||||||||||| ||| ||||||||||||    
T  43138668 ttaagtcacgttgcatttaacacttgcgtgacttaagtcatgctgaaggtatttt 43138722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 479 - 516
Target Start/End: Complemental strand, 1605331 - 1605294
Alignment:
Q  479 ttaagtcacgttgaatttaatacctgcgtgacttaagt 516  Q
    |||||||||||||||||||| |||||||||||||||||    
T  1605331 ttaagtcacgttgaatttaacacctgcgtgacttaagt 1605294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 262 - 295
Target Start/End: Original strand, 21178639 - 21178672
Alignment:
Q  262 tgtgtatttaacaacgaatttgtgtaatttggat 295  Q
    ||||||||||||||||||||||||||||||||||    
T  21178639 tgtgtatttaacaacgaatttgtgtaatttggat 21178672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 23690319 - 23690360
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  23690319 ctttttctctctccattatttttgaccaatgaaaagagagaa 23690360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 51039102 - 51039061
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagaga 42  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  51039102 ttcctttttctctctccattgtttttaaccaatgaaaagaga 51039061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 4896486 - 4896442
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  4896486 ttcctttttctctctccattgtttttgaccaatgaaaagagagaa 4896442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 12074133 - 12074093
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  12074133 tttttctctctccattgattttgaccaatgaaaagagagaa 12074093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30778250 - 30778206
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  ||||||||||| |||||||||||    
T  30778250 ttcctttttctctctccattgtttttaaccaataaaaagagagaa 30778206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 31240736 - 31240792
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcac 60  Q
    |||||||||||| ||||  |||||||||||||||||||||||   ||||||||||||    
T  31240736 ctttttctctcttcattgtttttaaccaatgaaaagagagaaaaaagaagttgtcac 31240792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35017238 - 35017282
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||||||| ||||| | ||||||||||||||||    
T  35017238 ttcctttttctctctccattgattttgatcaatgaaaagagagaa 35017282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 37977200 - 37977244
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||| |||| || |||||||||||||||    
T  37977200 ttcctttttctctctccattattttttactaatgaaaagagagaa 37977244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 311
Target Start/End: Original strand, 41785088 - 41785124
Alignment:
Q  275 acgaatttgtgtaatttggatcgtttatgtgtaatta 311  Q
    |||||||||||||||||||||||||||||||| ||||    
T  41785088 acgaatttgtgtaatttggatcgtttatgtgtgatta 41785124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 42915205 - 42915145
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||| || |||  |||||||||||||||||||||||   |||||||||||||    
T  42915205 ttcctttttctctttctattgtttttaaccaatgaaaagagagaaaaaagaagttgtcaca 42915145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 22257182 - 22257139
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagaga 44  Q
    |||||||||||||||| |||  ||||||||||||||||||||||    
T  22257182 ttcctttttctctctctattgtttttaaccaatgaaaagagaga 22257139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 39241289 - 39241246
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagaga 44  Q
    |||||||||||||||||| |  ||||||||||||||||||||||    
T  39241289 ttcctttttctctctccaatgtttttaaccaatgaaaagagaga 39241246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 41119506 - 41119427
Alignment:
Q  7 tttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacatatggttgctcaaatatcactactc 86  Q
    ||||||||||||||  |||| |||||||||||||||| |   | |||||||| ||| |||||| ||||||| ||||||||    
T  41119506 tttctctctccattgtttttgaccaatgaaaagagaggaaaaaaaagttgtctcatttggttgttcaaataacactactc 41119427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 49194968 - 49195050
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacatatggttgctcaaatatcactac 84  Q
    ||||| ||||||||||||||  |||| |||||| ||||||||||    |||||||||||||||  |||| ||||||||||||||    
T  49194968 ttcctctttctctctccattgtttttgaccaataaaaagagagagaaaagaagttgtcacata-agttgttcaaatatcactac 49195050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 1987697 - 1987655
Alignment:
Q  3 cctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||  |||| ||||||||||||||||||    
T  1987697 cctttttctctctccattgtttttgaccaatgaaaagagagaa 1987655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 24337338 - 24337280
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacata 63  Q
    ||||||||||||||||  |||| ||||||||||||||||||   ||||| |||||||||    
T  24337338 tttttctctctccattttttttgaccaatgaaaagagagaaaaaagaagctgtcacata 24337280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 31413772 - 31413730
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagag 43  Q
    ||||||||||||||||||||| |||| |||||| |||||||||    
T  31413772 ttcctttttctctctccattatttttgaccaataaaaagagag 31413730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 50006927 - 50006869
Alignment:
Q  104 atggttcaaaataacattttatgtctttatctccgatccattgaagtctaatatttatt 162  Q
    |||||| |||||||| |||||  ||||||| |||||||| ||||||| |||||||||||    
T  50006927 atggttgaaaataaccttttacatctttatgtccgatccgttgaagtgtaatatttatt 50006869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 3286903 - 3286940
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaa 38  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  3286903 ttcctttttctctctccattgtttttaaccaatgaaaa 3286940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 31658007 - 31658064
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    |||||||||||||||||  |||| |||||||||||| |||||   |||||||||||||    
T  31658007 ctttttctctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgtcaca 31658064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 41952916 - 41952957
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||||  |||||| ||||||||||||||||    
T  41952916 ctttttctctctccattgtttttaatcaatgaaaagagagaa 41952957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 46173622 - 46173663
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagaga 42  Q
    ||||||||||||||||||||  |||| |||||||||||||||    
T  46173622 ttcctttttctctctccattgttttttaccaatgaaaagaga 46173663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 46567017 - 46567058
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||||  |||| ||||||||||||||||||    
T  46567017 ctttttctctctccattgtttttgaccaatgaaaagagagaa 46567058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 48099895 - 48099936
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagaga 42  Q
    ||||||||||||||||||||  ||||||||||| ||||||||    
T  48099895 ttcctttttctctctccattgtttttaaccaataaaaagaga 48099936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 48148456 - 48148497
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||||| |||| | ||||||||||||||||    
T  48148456 ctttttctctctccattattttttatcaatgaaaagagagaa 48148497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 51389404 - 51389461
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    |||||||||||||||||  |||| || |||||||||||||||   |||||||||||||    
T  51389404 ctttttctctctccattgttttttactaatgaaaagagagaaaaaagaagttgtcaca 51389461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 54801081 - 54801122
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagaga 42  Q
    ||||||||||||||||||||| |||| |||||| ||||||||    
T  54801081 ttcctttttctctctccattatttttgaccaataaaaagaga 54801122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 55642591 - 55642550
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagaga 42  Q
    ||||||||||||||||||||| |||| |||||| ||||||||    
T  55642591 ttcctttttctctctccattattttttaccaataaaaagaga 55642550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 1580265 - 1580209
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||||||  ||||| |||||||||||||||||   | |||||||||||    
T  1580265 tttttctctctccattgtttttatccaatgaaaagagagaaaaaaaaagttgtcaca 1580209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 1796450 - 1796494
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||| |||| |||||| | |||||||||    
T  1796450 ttcctttttctctctccattatttttgaccaataagaagagagaa 1796494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 16004308 - 16004268
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||| ||||| |||| ||||||||||||||||||    
T  16004308 tttttctctcttcattatttttgaccaatgaaaagagagaa 16004268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 16508959 - 16508919
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||| |||| |||| ||||||||||||||||||    
T  16508959 tttttctctctctattatttttgaccaatgaaaagagagaa 16508919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 18874910 - 18874866
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| |||||||| |||||||||    
T  18874910 ttcctttttctctctccattgtttttgaccaatgagaagagagaa 18874866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 29577418 - 29577378
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||  |||| ||||||||||||||||||    
T  29577418 tttttctctctccattgtttttgaccaatgaaaagagagaa 29577378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 34027981 - 34028025
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| |||||||| |||||||||    
T  34027981 ttcctttttctctctccattgtttttgaccaatgagaagagagaa 34028025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 34974543 - 34974623
Alignment:
Q  6 ttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacatatggttgctcaaatatcactactc 86  Q
    |||| ||||||||||  |||| |||||||||||| |||||   |||||||||||||  | |||| |||||||||| |||||    
T  34974543 ttttttctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgtcacaattagttgttcaaatatcattactc 34974623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 38952774 - 38952818
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||| ||||||    
T  38952774 ttcctttttctctctccattgtttttgaccaatgaaaaaagagaa 38952818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 39844244 - 39844200
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| |||||| |||||||||||    
T  39844244 ttcctttttctctctccattgtttttgaccaataaaaagagagaa 39844200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40721950 - 40721906
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||| |||| |||||| |||| ||||||    
T  40721950 ttcctttttctctctccattatttttgaccaataaaaaaagagaa 40721906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 43982982 - 43983026
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| |||||||| |||||||||    
T  43982982 ttcctttttctctctccattgtttttgaccaatgagaagagagaa 43983026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 45678348 - 45678392
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| |||||| |||||||||||    
T  45678348 ttcctttttctctctccattgtttttgaccaataaaaagagagaa 45678392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 46844223 - 46844183
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||  ||||||||||| |||||||||||    
T  46844223 tttttctctctccattgtttttaaccaataaaaagagagaa 46844183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 46911987 - 46912059
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacatatggttgctcaaata 77  Q
    ||||||| |||| |||  |||| ||||||||||||||||||   | |||||||| |||||||||| |||||||    
T  46911987 tttttctttctcaattgtttttgaccaatgaaaagagagaaaaaataagttgtctcatatggttgttcaaata 46912059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 47134826 - 47134782
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||| ||||| ||||| ||||| |||||||||||    
T  47134826 ttcctttttctctcttcattacttttatccaataaaaagagagaa 47134782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 47998679 - 47998723
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||| ||||    
T  47998679 ttcctttttctctctccattgtttttgaccaatgaaaagaaagaa 47998723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 53292235 - 53292279
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  ||||||||||| |||||| ||||    
T  53292235 ttcctttttctctctccattgtttttaaccaataaaaagatagaa 53292279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 54615489 - 54615453
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaa 37  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  54615489 ttcctttttctttctccattgattttaaccaatgaaa 54615453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 56025341 - 56025385
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| |||||| |||||||||||    
T  56025341 ttcctttttctctctccattgtttttgaccaatcaaaagagagaa 56025385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 2e-17; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 30531234 - 30531316
Alignment:
Q  87 attacatatttagattaatggttcaaaataacattttatgtctttatctccgatccattgaagtctaatatttattaacgtgt 169  Q
    ||||||| ||||| ||||||||| ||||||||||||||  ||||||| |||||||| ||||||| ||||||||||| ||||||    
T  30531234 attacatgtttaggttaatggttgaaaataacattttacatctttatgtccgatccgttgaagtgtaatatttatttacgtgt 30531316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 32457741 - 32457683
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtca 59  Q
    ||||||||||||||||||||| |||||||||||||||||||||||   |||||||||||    
T  32457741 ttcctttttctctctccattatttttaaccaatgaaaagagagaaaaaagaagttgtca 32457683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 238 - 305
Target Start/End: Complemental strand, 32125151 - 32125083
Alignment:
Q  238 ttgaatttgaatgaatttgtgttatgtgta-tttaacaacgaatttgtgtaatttggatcgtttatgtg 305  Q
    |||||||| ||| |||||| |||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  32125151 ttgaattttaatcaatttgggttatgtgtagtttaacgacgaatttgtgtaatttggttcgtttatgtg 32125083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 6126539 - 6126583
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  6126539 ttcctttttctctctccattgtttttaaccaatgaaaagagagaa 6126583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 51464258 - 51464214
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  51464258 ttcctttttctctctccattgtttttaaccaatgaaaagagagaa 51464214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 51650439 - 51650482
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagaga 44  Q
    ||||||||||||||||||||  ||||||||||||||||||||||    
T  51650439 ttcctttttctctctccattgtttttaaccaatgaaaagagaga 51650482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 311
Target Start/End: Original strand, 9193989 - 9194051
Alignment:
Q  249 tgaatttgtgttatgtgtatttaacaacgaatttgtgtaatttggatcgtttatgtgtaatta 311  Q
    ||||||||||   |||||||||||| ||||||||||||||||| ||||| |||||||| ||||    
T  9193989 tgaatttgtggattgtgtatttaacgacgaatttgtgtaatttagatcgattatgtgtgatta 9194051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 35272112 - 35272174
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacata 63  Q
    ||||||||||||||||||||  |||| |||||| |||||||||||   |||||||||||||||    
T  35272112 ttcctttttctctctccattgtttttgaccaataaaaagagagaaaaaagaagttgtcacata 35272174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 39604232 - 39604174
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtca 59  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||   |||||||||||    
T  39604232 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtca 39604174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 46473213 - 46473271
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtca 59  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||   |||||||||||    
T  46473213 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtca 46473271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 27198137 - 27198096
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  27198137 ctttttctctctccattgtttttaaccaatgaaaagagagaa 27198096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 29800532 - 29800491
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  29800532 ctttttctctctccattatttttgaccaatgaaaagagagaa 29800491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 981555 - 981599
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||| |||||| |||| ||||||||||||||||||    
T  981555 ttcctttttctctccccattatttttgaccaatgaaaagagagaa 981599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 1901912 - 1901868
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  1901912 ttcctttttctctctccattgtttttgaccaatgaaaagagagaa 1901868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 1911358 - 1911314
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  1911358 ttcctttttctctctccattgtttttgaccaatgaaaagagagaa 1911314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7949873 - 7949917
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  ||||||||||| |||||||||||    
T  7949873 ttcctttttctctctccattttttttaaccaatcaaaagagagaa 7949917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8066440 - 8066484
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  8066440 ttcctttttctctctccattgtttttgaccaatgaaaagagagaa 8066484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25959528 - 25959484
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  25959528 ttcctttttctctctccattgtttttgaccaatgaaaagagagaa 25959484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 479 - 551
Target Start/End: Original strand, 30259817 - 30259889
Alignment:
Q  479 ttaagtcacgttgaatttaatacctgcgtgacttaagtaatgttgaaggtatttttatcggtttgtatgggag 551  Q
    |||||||||||||  ||||| ||||||||||| ||||| |||| |  |||||||| ||| |||||||||||||    
T  30259817 ttaagtcacgttgggtttaacacctgcgtgacataagtcatgtggtgggtattttgatcagtttgtatgggag 30259889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 30839542 - 30839602
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||||||| ||| ||||  |||||||||||||||||   |||||||||||||    
T  30839542 ttcctttttctctctcctttatttttcgccaatgaaaagagagaaaatagaagttgtcaca 30839602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 32687942 - 32687902
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  32687942 tttttctctctccattgtttttaaccaatgaaaagagagaa 32687902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 33007445 - 33007489
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  33007445 ttcctttttctctctccattgtttttgaccaatgaaaagagagaa 33007489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 34271470 - 34271430
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  34271470 tttttctctctccattatttttgaccaatgaaaagagagaa 34271430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 37215217 - 37215157
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||   | |||||||||||    
T  37215217 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcaca 37215157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37303060 - 37303016
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  37303060 ttcctttttctctctccattgttttttaccaatgaaaagagagaa 37303016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 42475963 - 42475919
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  42475963 ttcctttttctctctccattggttttgaccaatgaaaagagagaa 42475919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 43169735 - 43169695
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  43169735 tttttctctctccattgtttttaaccaatgaaaagagagaa 43169695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 5188326 - 5188381
Alignment:
Q  6 ttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    |||| ||||||||||  |||||||||||||||||||||||   |||||||||||||    
T  5188326 ttttttctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtcaca 5188381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 364
Target Start/End: Original strand, 9194009 - 9194056
Alignment:
Q  317 ttaacaacgaatttgttaaatttggatcgattatgtgtgattatgtta 364  Q
    ||||| ||||||||||  ||||| ||||||||||||||||||||||||    
T  9194009 ttaacgacgaatttgtgtaatttagatcgattatgtgtgattatgtta 9194056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36869823 - 36869780
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagaga 44  Q
    ||||||||||||||||||||  |||| |||||||||||||||||    
T  36869823 ttcctttttctctctccattgtttttgaccaatgaaaagagaga 36869780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 41717349 - 41717392
Alignment:
Q  2 tcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||||||  |||| ||||||||||||||||||    
T  41717349 tcctttttctctctccattgtttttgaccaatgaaaagagagaa 41717392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41877597 - 41877554
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagaga 44  Q
    ||||||||||||||||||||  |||| |||||||||||||||||    
T  41877597 ttcctttttctctctccattgtttttgaccaatgaaaagagaga 41877554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 44096556 - 44096513
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagaga 44  Q
    ||||||||||||||||||||  ||||||| ||||||||||||||    
T  44096556 ttcctttttctctctccattgtttttaacgaatgaaaagagaga 44096513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 14957921 - 14957983
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacata 63  Q
    ||||||||||||||||||||| |||| |||||||||||| | |||   ||| |||||||||||    
T  14957921 ttcctttttctctctccattatttttgaccaatgaaaagggcgaaaaaagaggttgtcacata 14957983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 26279969 - 26280011
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagag 43  Q
    ||||||||||||||||||||  |||| ||||||||||||||||    
T  26279969 ttcctttttctctctccattgtttttgaccaatgaaaagagag 26280011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 194 - 260
Target Start/End: Original strand, 27934319 - 27934385
Alignment:
Q  194 ttaacgtgtaataatgtattgtgttcgaatttgtgtctctaactttgaatttgaatgaatttgtgtt 260  Q
    |||| |||||||| |||| ||||||| ||||||||||| ||   |||||||| ||||||||||||||    
T  27934319 ttaatgtgtaatagtgtaatgtgttcaaatttgtgtctgtattgttgaattttaatgaatttgtgtt 27934385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 29057737 - 29057775
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagag 43  Q
    |||||||||| ||||| ||||||||||||||||||||||    
T  29057737 tttttctctccccattgattttaaccaatgaaaagagag 29057775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 197 - 267
Target Start/End: Original strand, 30531311 - 30531381
Alignment:
Q  197 acgtgtaataatgtattgtgttcgaatttgtgtctctaactttgaatttgaatgaatttgtgttatgtgta 267  Q
    |||||||||| |||| |||||| |||||| ||| | |||  |||||||| ||||||||||||| |||||||    
T  30531311 acgtgtaatagtgtaatgtgtttgaatttatgtttgtaatgttgaattttaatgaatttgtgtcatgtgta 30531381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 325 - 406
Target Start/End: Original strand, 30531562 - 30531646
Alignment:
Q  325 gaatttgttaaatttggatcgattatgtgtgattatgtt---aaactggtgtaattcgggtcaattatgagagtgtaaaaattac 406  Q
    ||||||||  ||||||||||| ||||||| |||||||||   ||||||  ||||||||| |||||||| || ||||||| |||||    
T  30531562 gaatttgtgtaatttggatcgtttatgtgcgattatgttgtgaaactgacgtaattcggatcaattattagtgtgtaaagattac 30531646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 31326795 - 31326837
Alignment:
Q  3 cctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||  |||| ||||||||||||||||||    
T  31326795 cctttttctctctccattgtttttgaccaatgaaaagagagaa 31326837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 48117421 - 48117463
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagag 43  Q
    ||||||||||||||||||||  |||| ||||||||||||||||    
T  48117421 ttcctttttctctctccattgtttttgaccaatgaaaagagag 48117463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 50745634 - 50745676
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagag 43  Q
    ||||||||||||||||||||  |||| ||||||||||||||||    
T  50745634 ttcctttttctctctccattgtttttgaccaatgaaaagagag 50745676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 55195432 - 55195474
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagag 43  Q
    ||||||||||||||||||||  |||||||| ||||||||||||    
T  55195432 ttcctttttctctctccattgtttttaaccgatgaaaagagag 55195474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 55344278 - 55344224
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtca 59  Q
    |||||||||||| |||  |||||||||||||||||||||||  || |||||||||    
T  55344278 tttttctctctctattgtttttaaccaatgaaaagagagaaaagaaaagttgtca 55344224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 169
Target Start/End: Complemental strand, 20514259 - 20514194
Alignment:
Q  104 atggttcaaaataacattttatgtctttatctccgatccattgaagtctaatatttattaacgtgt 169  Q
    |||||| |||||||| |||||  | ||||  || ||||||||||||| ||||||||||||||||||    
T  20514259 atggttgaaaataaccttttacatatttacgtcagatccattgaagtgtaatatttattaacgtgt 20514194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 28269891 - 28269948
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtc 58  Q
    ||||||||||||||||||||  |||| ||||||||||||| ||||   ||||||||||    
T  28269891 ttcctttttctctctccattgtttttgaccaatgaaaagatagaaaaaagaagttgtc 28269948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 33971971 - 33972012
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||||  ||||||||||||| |||||||||    
T  33971971 ctttttctctctccattgtttttaaccaatgagaagagagaa 33972012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 36799486 - 36799527
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||||  |||| ||||||||||||||||||    
T  36799486 ctttttctctctccattgtttttgaccaatgaaaagagagaa 36799527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 39540323 - 39540364
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||||  |||| ||||||||||||||||||    
T  39540323 ctttttctctctccattttttttgaccaatgaaaagagagaa 39540364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 46003790 - 46003827
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaa 38  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  46003790 ttcctttttctctctccattgtttttaaccaatgaaaa 46003827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 46953031 - 46953072
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagaga 42  Q
    ||||||||||||||| ||||| |||||||| |||||||||||    
T  46953031 ttcctttttctctcttcattatttttaaccgatgaaaagaga 46953072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 1765482 - 1765522
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||| |||| |||||||||||| |||||    
T  1765482 tttttctctctccattattttttaccaatgaaaagtgagaa 1765522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 3483208 - 3483264
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||||||| |||| | ||||||||||||||||   | |||||||||||    
T  3483208 tttttctctctccattattttttatcaatgaaaagagagaaaaaaaaagttgtcaca 3483264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11173535 - 11173595
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||||  ||||  |||| ||||||||||||||||||   |||||||||||||    
T  11173535 ttcctttttctctcaacattgtttttgaccaatgaaaagagagaaaaaagaagttgtcaca 11173595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 27162453 - 27162409
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||| ||||||||||| ||||||||||| |||||| ||||    
T  27162453 ttcctttttttctctccattatttttaaccaataaaaagatagaa 27162409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 29705992 - 29706048
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||| ||||||  |||| ||||||||||||||||||   |||||||||||||    
T  29705992 tttttctctatccattgttttttaccaatgaaaagagagaaaaaagaagttgtcaca 29706048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 305
Target Start/End: Original strand, 30531562 - 30531590
Alignment:
Q  277 gaatttgtgtaatttggatcgtttatgtg 305  Q
    |||||||||||||||||||||||||||||    
T  30531562 gaatttgtgtaatttggatcgtttatgtg 30531590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 32656060 - 32656104
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||| ||||    
T  32656060 ttcctttttctctctccattgtttttgaccaatgaaaagaaagaa 32656104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 32795921 - 32795965
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| |||||| |||||||||||    
T  32795921 ttcctttttctctctccattgtttttgaccaataaaaagagagaa 32795965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34628061 - 34628017
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||| |||||||  |||| ||||||||||||||||||    
T  34628061 ttcctttttctccctccattgtttttgaccaatgaaaagagagaa 34628017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35554101 - 35554057
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||| ||||||  |||| ||||||||||||||||||    
T  35554101 ttcctttttctctttccattgtttttgaccaatgaaaagagagaa 35554057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 37710489 - 37710533
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||| |||| |||| |||||| |||||||||||    
T  37710489 ttcctttttctctctctattatttttgaccaataaaaagagagaa 37710533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 41309089 - 41309129
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||  |||||||||||||||||| ||||    
T  41309089 tttttctctctccattgtttttaaccaatgaaaagatagaa 41309129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 43900861 - 43900901
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||| ||||||||||| | |||||||||    
T  43900861 tttttctctctccattatttttaaccaataagaagagagaa 43900901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 44127174 - 44127134
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||  ||||||||||||| |||||||||    
T  44127174 tttttctctctccattgtttttaaccaatgagaagagagaa 44127134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 44695100 - 44695140
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||  |||||||||||||||| ||||||    
T  44695100 tttttctctctccattgtttttaaccaatgaaaaaagagaa 44695140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 44855336 - 44855380
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  ||||||||||| | |||||||||    
T  44855336 ttcctttttctctctccattttttttaaccaataagaagagagaa 44855380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 49130939 - 49130999
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||||||||||  |||| || ||||||||||||||    |||||||||||||    
T  49130939 ttcctttttctctctccattgtttttgactaatgaaaagagagagaaaagaagttgtcaca 49130999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 49457654 - 49457694
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||  |||| ||||||||||||||||||    
T  49457654 tttttctctctccattgtttttgaccaatgaaaagagagaa 49457694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 51385422 - 51385382
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||  |||| ||||||||||||||||||    
T  51385422 tttttctctctccattgtttttgaccaatgaaaagagagaa 51385382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 13711146 - 13711206
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||||||||||  |||||||||||||||||||||||   |||||||||||||    
T  13711146 ttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtcaca 13711206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 37085207 - 37085120
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcac--atatggttgctcaaatatcactactc 86  Q
    ||||||||||||| || ||||||||| |||||| |||||||||||   ||||||||||||  |||| |||| ||||||||||||||||    
T  37085207 ttcctttttctctttctattaattttgaccaataaaaagagagaaaaaagaagttgtcacatatatagttgttcaaatatcactactc 37085120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 12065999 - 12066053
Alignment:
Q  6 ttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcac 60  Q
    ||||||||||||||| ||||||||||||||||||||||||   ||||||||||||    
T  12065999 ttttctctctccattgattttaaccaatgaaaagagagaaaaaagaagttgtcac 12066053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 22728437 - 22728379
Alignment:
Q  111 aaaataacattttatgtctttatctccgatccattgaagtctaatatttattaacgtgt 169  Q
    ||||||||||||||  ||||||| |||||||| ||||||| ||||||||||||||||||    
T  22728437 aaaataacattttacatctttatgtccgatccgttgaagtgtaatatttattaacgtgt 22728379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 42251906 - 42251844
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacata 63  Q
    ||||||||||||| |||||| ||||| ||||||||||||||||||   |||||||||||||||    
T  42251906 ttcctttttctctttccattgattttgaccaatgaaaagagagaaaaaagaagttgtcacata 42251844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 11164358 - 11164302
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||||||  |||||||||||||||||||||||   |||||||||||||    
T  11164358 tttttctctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtcaca 11164302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19913869 - 19913913
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  19913869 ttcctttttctctctccattgtttttaaccaatgaaaagagagaa 19913913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 196 - 267
Target Start/End: Original strand, 28758989 - 28759060
Alignment:
Q  196 aacgtgtaataatgtattgtgttcgaatttgtgtctctaactttgaatttgaatgaatttgtgttatgtgta 267  Q
    ||||||||||| | || ||||||||||||||||||| ||    ||||||| |||||||||||||||||||||    
T  28758989 aacgtgtaatagtataatgtgttcgaatttgtgtctatagtgatgaatttaaatgaatttgtgttatgtgta 28759060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 1889232 - 1889294
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacata 63  Q
    |||||||||||||| |||||  |||| ||||||||||||||||||   |||||||||||||||    
T  1889232 ttcctttttctctcaccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacata 1889294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 6639458 - 6639396
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacata 63  Q
    ||||||||||||||||||||  |||| |||||||||||||||||    |||||||||||||||    
T  6639458 ttcctttttctctctccattgttttttaccaatgaaaagagagagaaaagaagttgtcacata 6639396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 28014045 - 28014127
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacatatggttgctcaaatatcactactca 87  Q
    |||||||||||||| || ||||||||||||||||||||||    | ||||||||  | ||||||| | |||||||||||||||    
T  28014045 tttttctctctccaatatttttaaccaatgaaaagagagagaaaataagttgtcttaaatggttgttaaaatatcactactca 28014127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 41353480 - 41353423
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    |||||||||||||||||| ||||||||||| |||| ||||||   |||||||||||||    
T  41353480 ctttttctctctccattatttttaaccaataaaaaaagagaaaaaagaagttgtcaca 41353423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3091826 - 3091886
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||| ||||||||||  |||| ||||||||||||||||||   |||||||||||||    
T  3091826 ttcctttttttctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcaca 3091886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5167728 - 5167684
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  5167728 ttcctttttctctctccattgtttttgaccaatgaaaagagagaa 5167684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5455439 - 5455395
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||| ||||||||  |||||||||||||||||||||||    
T  5455439 ttcctttttctttctccattgtttttaaccaatgaaaagagagaa 5455395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12600133 - 12600193
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||| ||||||  | |||||||||||||||||||||   |||||||||||||    
T  12600133 ttcctttttctctttccattgttcttaaccaatgaaaagagagaaaaaagaagttgtcaca 12600193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 13104564 - 13104624
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||   | |||||||||||    
T  13104564 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcaca 13104624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 13553232 - 13553272
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  13553232 tttttctctctccattatttttgaccaatgaaaagagagaa 13553272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 23880180 - 23880224
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  23880180 ttcctttttctctctccatttttttttaccaatgaaaagagagaa 23880224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 26321683 - 26321639
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||| |||  |||||||||||||||||||||||    
T  26321683 ttcctttttctctctcaattgtttttaaccaatgaaaagagagaa 26321639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 32750083 - 32750143
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||   | |||||||||||    
T  32750083 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcaca 32750143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 36133059 - 36133119
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||| ||||||  | |||||||||||||||||||||   |||||||||||||    
T  36133059 ttcctttttctctttccattgttcttaaccaatgaaaagagagaaaaaagaagttgtcaca 36133119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 45515581 - 45515541
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  45515581 tttttctctctccattgtttttaaccaatgaaaagagagaa 45515541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 13850165 - 13850126
Alignment:
Q  6 ttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  13850165 ttttctctctccattatttttgaccaatgaaaagagagaa 13850126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28165214 - 28165257
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagaga 44  Q
    ||||||||||||||||||||| |||| |||||| ||||||||||    
T  28165214 ttcctttttctctctccattatttttgaccaataaaaagagaga 28165257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 311
Target Start/End: Complemental strand, 19479008 - 19478974
Alignment:
Q  277 gaatttgtgtaatttggatcgtttatgtgtaatta 311  Q
    |||||||||||||||||||||||||||||| ||||    
T  19479008 gaatttgtgtaatttggatcgtttatgtgtgatta 19478974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 28759168 - 28759210
Alignment:
Q  269 ttaacaacgaatttgtgtaatttggatcgtttatgtgtaatta 311  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||    
T  28759168 ttaacgacgaatttgtgtaatttggatcgtttatatgtgatta 28759210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 31296821 - 31296767
Alignment:
Q  9 tctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacata 63  Q
    |||||||||||| ||||| ||||||||||||||||||   |||| ||||||||||    
T  31296821 tctctctccattgattttgaccaatgaaaagagagaaaaaagaaattgtcacata 31296767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 35705903 - 35705861
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagag 43  Q
    ||||||||||||||||||||  |||| ||||||||||||||||    
T  35705903 ttcctttttctctctccattgtttttgaccaatgaaaagagag 35705861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 87 - 165
Target Start/End: Original strand, 36342434 - 36342512
Alignment:
Q  87 attacatatttagattaatggttcaaaataacattttatgtctttatctccgatccattgaagtctaatatttattaac 165  Q
    ||||||| ||||| ||||||||| |||||||||| |||  ||||| | | | |||||||||| | ||||||||||||||    
T  36342434 attacatgtttaggttaatggttaaaaataacatattacatctttgtgttctatccattgaaatgtaatatttattaac 36342512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 41156989 - 41156947
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagag 43  Q
    ||||||||||||||||||||  |||| ||||||||||||||||    
T  41156989 ttcctttttctctctccattgcttttgaccaatgaaaagagag 41156947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 43650533 - 43650471
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacata 63  Q
    ||||||||||||| |||||| ||||| |||||| |||||||||||   |||| ||||||||||    
T  43650533 ttcctttttctctttccattgattttgaccaataaaaagagagaaaaaagaaattgtcacata 43650471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 15141547 - 15141632
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacatatggttgctcaaatatcactactc 86  Q
    ||||||||||| ||||||||  |||| || ||||||||||||||    |||||||||| || |||| || |||||| |||||||||    
T  15141547 ttcctttttctttctccattgtttttgactaatgaaaagagagagaaaagaagttgtctcaaatggatgttcaaatgtcactactc 15141632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 32688530 - 32688489
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagaga 42  Q
    ||||||||||||||||||||  |||| |||||||||||||||    
T  32688530 ttcctttttctctctccattgtttttgaccaatgaaaagaga 32688489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 169
Target Start/End: Original strand, 35004294 - 35004359
Alignment:
Q  104 atggttcaaaataacattttatgtctttatctccgatccattgaagtctaatatttattaacgtgt 169  Q
    |||||| | ||||||||| ||  ||||||| |||||||  ||||||| ||||||||||||||||||    
T  35004294 atggttgagaataacattctacatctttatgtccgatctgttgaagtgtaatatttattaacgtgt 35004359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 39133810 - 39133851
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||||| ||||||||||| |||| ||||||    
T  39133810 ctttttctctctccattatttttaaccaataaaaaaagagaa 39133851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 40951278 - 40951319
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||||  |||| ||||||||||||||||||    
T  40951278 ctttttctctctccattgttttttaccaatgaaaagagagaa 40951319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 1574540 - 1574580
Alignment:
Q  3 cctttttctctctccattaattttaaccaatgaaaagagag 43  Q
    ||||||||||||||||||  |||| ||||||||||||||||    
T  1574540 cctttttctctctccattttttttgaccaatgaaaagagag 1574580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 3196073 - 3196029
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||| |||| |||||| | |||||||||    
T  3196073 ttcctttttctctctccattatttttgaccaataagaagagagaa 3196029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 3959981 - 3960025
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| | ||||||||||||||||    
T  3959981 ttcctttttctctctccattgtttttgatcaatgaaaagagagaa 3960025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 479 - 551
Target Start/End: Original strand, 4865634 - 4865706
Alignment:
Q  479 ttaagtcacgttgaatttaatacctgcgtgacttaagtaatgttgaaggtatttttatcggtttgtatgggag 551  Q
    ||||||||||||| |||||| ||||| || |||||||| |||| |  ||||||||  || |||||||||||||    
T  4865634 ttaagtcacgttggatttaacacctgtgtaacttaagtcatgtgggtggtattttggtcagtttgtatgggag 4865706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5067627 - 5067583
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| |||||||||||| |||||    
T  5067627 ttcctttttctctctccattgtttttgaccaatgaaaagtgagaa 5067583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 7428518 - 7428558
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||  |||||| ||||||||||||||||    
T  7428518 tttttctctctccattgtttttaatcaatgaaaagagagaa 7428558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11229307 - 11229263
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| |||||||||||| |||||    
T  11229307 ttcctttttctctctccattgtttttgaccaatgaaaagtgagaa 11229263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 12962474 - 12962514
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagaga 44  Q
    |||||||||||||||||  ||||||||||| ||||||||||    
T  12962474 ctttttctctctccattgtttttaaccaattaaaagagaga 12962514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 15019151 - 15019111
Alignment:
Q  6 ttttctctctccattaattttaaccaatgaaaagagagaat 46  Q
    |||||||||||||||  ||||||||||| ||||||||||||    
T  15019151 ttttctctctccattgtttttaaccaataaaaagagagaat 15019111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 19523387 - 19523343
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| |||||| |||||||||||    
T  19523387 ttcctttttctctctccattgtttttgaccaataaaaagagagaa 19523343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19631473 - 19631517
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  ||||||||||| | |||||||||    
T  19631473 ttcctttttctctctccattgtttttaaccaataagaagagagaa 19631517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 19668173 - 19668129
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||| ||||||  |||| ||||||||||||||||||    
T  19668173 ttcctttttctctatccattgtttttgaccaatgaaaagagagaa 19668129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19828374 - 19828418
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  ||||||||||| | |||||||||    
T  19828374 ttcctttttctctctccattgtttttaaccaataagaagagagaa 19828418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 22390241 - 22390297
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||||||  |||| |||||||||||||||||    |||||||||||||    
T  22390241 tttttctctctccattgtttttgaccaatgaaaagagagagaaaagaagttgtcaca 22390297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 25801793 - 25801753
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||  |||| ||||||||||||||||||    
T  25801793 tttttctctctccattgtttttgaccaatgaaaagagagaa 25801753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 29795521 - 29795565
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||| ||||||||||  |||| ||||||||||||||||||    
T  29795521 ttcctttttatctctccattgtttttgaccaatgaaaagagagaa 29795565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30413718 - 30413674
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| |||||| |||||||||||    
T  30413718 ttcctttttctctctccattgtttttgaccaatcaaaagagagaa 30413674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 30856892 - 30856936
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||| ||||||  |||| ||||||||||||||||||    
T  30856892 ttcctttttctctatccattgtttttgaccaatgaaaagagagaa 30856936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 34249665 - 34249709
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||| |||||||||  |||| ||||||||||||||||||    
T  34249665 ttcctttttccctctccattgtttttgaccaatgaaaagagagaa 34249709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 34913173 - 34913217
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||| |||| | |||||| |||||||||    
T  34913173 ttcctttttctctctccattatttttgaacaatgagaagagagaa 34913217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 43725290 - 43725334
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| |||||||||||| |||||    
T  43725290 ttcctttttctctctccattgtttttgaccaatgaaaagtgagaa 43725334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 87 - 169
Target Start/End: Complemental strand, 45818 - 45736
Alignment:
Q  87 attacatatttagattaatggttcaaaataacattttatgtctttatctccgatccattgaagtctaatatttattaacgtgt 169  Q
    ||||||| ||||| ||||||||| ||||||||||||||  ||||| | |||| ||||||||||| |||||| |||| ||||||    
T  45818 attacatgtttaggttaatggttgaaaataacattttacatctttgtgtccgctccattgaagtgtaatatgtattgacgtgt 45736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 31517166 - 31517104
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacata 63  Q
    |||||||||||||||||||| || ||||||||| |||||||||||   |||||||||||||||    
T  31517166 ttcctttttctctctccattgatcttaaccaataaaaagagagaaaaaagaagttgtcacata 31517104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 10628352 - 10628392
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagaga 44  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  10628352 ctttttctctctccattgattttaaccaatgaaaagagaga 10628392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 9954633 - 9954692
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcac 60  Q
    |||| |||||||||||||||  |||||||||||||||||||||||   ||||||||||||    
T  9954633 ttccgttttctctctccattgtttttaaccaatgaaaagagagaaagaagaagttgtcac 9954692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 318
Target Start/End: Original strand, 1031218 - 1031343
Alignment:
Q  194 ttaacgtgtaataatgtattgtgttc-gaatttgtgtctctaactttgaatttgaatgaatttgtgtt-atgtgtatttaacaacgaatttgtgtaattt 291  Q
    ||||||||||||| |||| ||| ||| |||||||||||  || | |||||||| |||||||||||||| ||||  ||||||| | ||||||| |||||||    
T  1031218 ttaacgtgtaatagtgtaatgttttccgaatttgtgtccgtatcgttgaattttaatgaatttgtgttgatgt-aatttaacgatgaatttgggtaattt 1031316  T
Q  292 ggatcgtttatgtgtaattacgtaatt 318  Q
     || ||||||||||  |||| ||||||    
T  1031317 tgaccgtttatgtgagattatgtaatt 1031343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 311
Target Start/End: Complemental strand, 7648023 - 7647961
Alignment:
Q  249 tgaatttgtgttatgtgtatttaacaacgaatttgtgtaatttggatcgtttatgtgtaatta 311  Q
    ||||||||||   |||||||||||| |||||||||||||||||| ||| ||||||||| ||||    
T  7648023 tgaatttgtggattgtgtatttaacgacgaatttgtgtaatttgtatcctttatgtgtgatta 7647961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 104 - 169
Target Start/End: Original strand, 1031161 - 1031226
Alignment:
Q  104 atggttcaaaataacattttatgtctttatctccgatccattgaagtctaatatttattaacgtgt 169  Q
    |||||| |||||||| |||||  ||||||| |||||| | ||||||| ||||||||||||||||||    
T  1031161 atggttgaaaataaccttttacatctttatgtccgatgcgttgaagtgtaatatttattaacgtgt 1031226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 34490435 - 34490476
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  34490435 ctttttctctctccattatttttgaccaatgaaaagagagaa 34490476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 16533246 - 16533202
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  16533246 ttcctttttctctctccattgttttttaccaatgaaaagagagaa 16533202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 31480812 - 31480760
Alignment:
Q  11 tctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacata 63  Q
    |||||||||| |||||||||||| |||||||||||   |||||||||||||||    
T  31480812 tctctccattgattttaaccaataaaaagagagaaaaaagaagttgtcacata 31480760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 29383645 - 29383704
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacata 63  Q
    ||||||| |||||||||  |||| ||||||||||||||||||   |||||||||||||||    
T  29383645 ctttttccctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacata 29383704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 32253869 - 32253908
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagaga 44  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  32253869 tttttctctctccattgtttttaaccaatgaaaagagaga 32253908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 2165286 - 2165244
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagag 43  Q
    ||||||||||||||||||||  |||| ||||||||||||||||    
T  2165286 ttcctttttctctctccattgtttttgaccaatgaaaagagag 2165244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 2176919 - 2176877
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagag 43  Q
    ||||||||||||||||||||  |||| ||||||||||||||||    
T  2176919 ttcctttttctctctccattgtttttgaccaatgaaaagagag 2176877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 87 - 165
Target Start/End: Complemental strand, 7648158 - 7648080
Alignment:
Q  87 attacatatttagattaatggttcaaaataacattttatgtctttatctccgatccattgaagtctaatatttattaac 165  Q
    ||||||| ||||| |||||| || ||||||||||||||| | ||  | | || ||||||||||| ||||||||||||||    
T  7648158 attacatgtttaggttaatgcttgaaaataacattttatatattcgtgttcgctccattgaagtgtaatatttattaac 7648080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 1688358 - 1688301
Alignment:
Q  2 tcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtca 59  Q
    |||||||||||||||||||  ||||||||||| ||||||||| |   |||||||||||    
T  1688358 tcctttttctctctccattgtttttaaccaataaaaagagaggaaaaagaagttgtca 1688301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 2163776 - 2163817
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagaga 42  Q
    |||||||||||||||||| |  ||||||||||||||||||||    
T  2163776 ttcctttttctctctccaatgtttttaaccaatgaaaagaga 2163817  T

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Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 2175409 - 2175450
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagaga 42  Q
    |||||||||||||||||| |  ||||||||||||||||||||    
T  2175409 ttcctttttctctctccaatgtttttaaccaatgaaaagaga 2175450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 3179989 - 3179948
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagaga 42  Q
    ||||||||||||||||||||  ||||||||||| ||||||||    
T  3179989 ttcctttttctctctccattgcttttaaccaataaaaagaga 3179948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 21443773 - 21443814
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagaga 42  Q
    ||||||||||||||||||||  |||| |||||||||||||||    
T  21443773 ttcctttttctctctccattgtttttgaccaatgaaaagaga 21443814  T

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Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 25554334 - 25554415
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacatatggttgctcaaatatcactactc 86  Q
    ||||||||||||  ||| |||| ||||||  ||||||||||    |||||||||| | ||||||| ||||||||||||||||    
T  25554334 tttttctctctcttttatttttgaccaatagaaagagagaaaaatgaagttgtcaaaaatggttgttcaaatatcactactc 25554415  T

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Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 28549003 - 28548966
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagaga 42  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  28549003 tttttctctctccattgtttttaaccaatgaaaagaga 28548966  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 9188932 - 9188888
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||| |||| |||||| | |||||||||    
T  9188932 ttcctttttctctctccattatttttgaccaataagaagagagaa 9188888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 16337052 - 16336996
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    ||||||||||||||||  |||| |||||||||||||||||    |||||||||||||    
T  16337052 tttttctctctccattgtttttgaccaatgaaaagagagagaatagaagttgtcaca 16336996  T

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Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 17835697 - 17835741
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  ||||||||||| | |||||||||    
T  17835697 ttcctttttctctctccattgtttttaaccaataagaagagagaa 17835741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 32457238 - 32457194
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||| ||||||    
T  32457238 ttcctttttctctctccattgtttttgaccaatgaaaaaagagaa 32457194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 32644697 - 32644741
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| |||||||| |||||||||    
T  32644697 ttcctttttctctctccattgttttttaccaatgagaagagagaa 32644741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 32853126 - 32853070
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    |||||||||||| |||  |||||||||||||||| ||||||   |||||||||||||    
T  32853126 tttttctctctcaattgtttttaaccaatgaaaaaagagaaaaaagaagttgtcaca 32853070  T

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Target: scaffold0054 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 31586 - 31502
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacatatggttgctcaaatatcactactc 86  Q
    ||||||||||||||||||||  |||||||||||||||||||||||   | ||||||||||| |   ||| ||||||||||||||||    
T  31586 ttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaaaaagttgtcaca-aaaattgttcaaatatcactactc 31502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5314 - 5358
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||    
T  5314 ttcctttttctctctccattatttttaaccaatgagaagagagaa 5358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 34491 - 34535
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  34491 ttcctttttctctctccattgtttttaaccaatgaaaagagagaa 34535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 6902 - 6945
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagaga 44  Q
    ||||||||||||||||||||  ||||||||||||||||||||||    
T  6902 ttcctttttctctctccattgtttttaaccaatgaaaagagaga 6945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 36087 - 36128
Alignment:
Q  4 ctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  36087 ctttttctctctccattatttttgaccaatgaaaagagagaa 36128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 15174 - 15130
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||||||||||||||| ||||||    
T  15174 ttcctttttctctctccattgtttttaaccaatgaaaaaagagaa 15130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 35479 - 35437
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagag 43  Q
    ||||||||||||||||||||| |||| |||||| |||||||||    
T  35479 ttcctttttctctctccattatttttgaccaatcaaaagagag 35437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 10502 - 10459
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagaga 44  Q
    ||||||||||||||||||||  |||| |||||||||||||||||    
T  10502 ttcctttttctctctccattgtttttgaccaatgaaaagagaga 10459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 17123 - 17165
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagag 43  Q
    ||||||||||||||||||||  |||| ||||||||||||||||    
T  17123 ttcctttttctctctccattgtttttgaccaatgaaaagagag 17165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 18633 - 18592
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagaga 42  Q
    |||||||||||||||||| |  ||||||||||||||||||||    
T  18633 ttcctttttctctctccaatgtttttaaccaatgaaaagaga 18592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 3028 - 3070
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagag 43  Q
    ||||||||||||||||||||  |||| ||||||||||||||||    
T  3028 ttcctttttctctctccattgtttttgaccaatgaaaagagag 3070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 219650 - 219588
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcacata 63  Q
    ||||||| ||||||||||||  |||| |||||||||||||||||    |||||||||||||||    
T  219650 ttcctttatctctctccattgtttttgaccaatgaaaagagagagaaaagaagttgtcacata 219588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2490 - 2446
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    |||||| |||||||||||||| |||| |||||| |||||||||||    
T  2490 ttccttcttctctctccattatttttgaccaataaaaagagagaa 2446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11522 - 11478
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| |||||||||||| |||||    
T  11522 ttcctttttctctctccattgtttttgaccaatgaaaagtgagaa 11478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27424 - 27468
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||| ||| |||||||  ||||||||||    
T  27424 ttcctttttctctctccattattttcaaccaatagaaagagagaa 27468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 34921 - 34964
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  34921 ttcctttttctctctccatt-gttttgaccaatgaaaagagagaa 34964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 38968 - 39008
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||| ||||||||| |||| ||||||||||||||||||    
T  38968 tttttctatctccattattttttaccaatgaaaagagagaa 39008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 18093 - 18133
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||| ||||||||||  |||||||||||||||||||||||    
T  18093 tttttatctctccattgtttttaaccaatgaaaagagagaa 18133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 113710 - 113770
Alignment:
Q  1 ttcctttttctctctccattaattttaaccaatgaaaagagagaattgagaagttgtcaca 61  Q
    |||||||| |||||||| ||  |||| ||||||||||||||||||  |||| |||||||||    
T  113710 ttccttttactctctccgttgtttttgaccaatgaaaagagagaaaagagaggttgtcaca 113770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 440807 - 440847
Alignment:
Q  5 tttttctctctccattaattttaaccaatgaaaagagagaa 45  Q
    ||||||||||||||||  |||| ||||||||||||||||||    
T  440807 tttttctctctccattgttttttaccaatgaaaagagagaa 440847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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