View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18404_high_47 (Length: 441)

Name: NF18404_high_47
Description: NF18404
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18404_high_47
NF18404_high_47
[»] chr4 (10 HSPs)
chr4 (55-421)||(26331240-26331608)
chr4 (235-318)||(50516011-50516093)
chr4 (233-310)||(25516167-25516244)
chr4 (234-310)||(28070842-28070918)
chr4 (236-310)||(25537462-25537536)
chr4 (233-310)||(2033725-2033802)
chr4 (231-309)||(41902132-41902210)
chr4 (233-310)||(50065116-50065193)
chr4 (214-308)||(23623495-23623592)
chr4 (274-316)||(45609994-45610036)
[»] chr8 (22 HSPs)
chr8 (214-420)||(34969627-34969837)
chr8 (233-318)||(12768256-12768340)
chr8 (233-318)||(42711823-42711907)
chr8 (234-318)||(20047766-20047849)
chr8 (230-316)||(13958990-13959076)
chr8 (233-310)||(989194-989271)
chr8 (233-318)||(20030754-20030838)
chr8 (233-317)||(7788643-7788727)
chr8 (233-317)||(31574801-31574885)
chr8 (233-308)||(25036625-25036702)
chr8 (233-308)||(25050662-25050739)
chr8 (214-317)||(15834695-15834801)
chr8 (233-308)||(18882751-18882828)
chr8 (236-316)||(24095486-24095566)
chr8 (205-308)||(18252245-18252353)
chr8 (233-308)||(18233343-18233420)
chr8 (233-308)||(18242794-18242871)
chr8 (238-308)||(4843301-4843373)
chr8 (233-310)||(7838675-7838752)
chr8 (205-308)||(24634313-24634418)
chr8 (214-261)||(33591561-33591611)
chr8 (214-261)||(33601150-33601200)
[»] chr7 (7 HSPs)
chr7 (232-322)||(28344765-28344854)
chr7 (233-318)||(48709380-48709464)
chr7 (236-318)||(32818649-32818729)
chr7 (233-308)||(11634024-11634101)
chr7 (237-291)||(39377204-39377258)
chr7 (205-261)||(13875087-13875145)
chr7 (275-311)||(16494276-16494312)
[»] scaffold0021 (2 HSPs)
scaffold0021 (233-318)||(124561-124645)
scaffold0021 (205-299)||(100528-100624)
[»] chr3 (11 HSPs)
chr3 (233-318)||(13327820-13327904)
chr3 (233-318)||(23487685-23487769)
chr3 (230-316)||(4307398-4307483)
chr3 (233-310)||(36432176-36432253)
chr3 (233-310)||(35125888-35125965)
chr3 (231-293)||(9292155-9292217)
chr3 (217-308)||(19389390-19389484)
chr3 (205-308)||(54625231-54625337)
chr3 (231-317)||(7783348-7783434)
chr3 (233-310)||(37920615-37920692)
chr3 (214-261)||(24874723-24874773)
[»] chr2 (7 HSPs)
chr2 (233-318)||(35877978-35878062)
chr2 (233-318)||(35885467-35885551)
chr2 (233-318)||(36725180-36725264)
chr2 (233-317)||(14273851-14273935)
chr2 (214-308)||(22632985-22633081)
chr2 (253-299)||(37911204-37911250)
chr2 (214-278)||(3397584-3397651)
[»] chr6 (11 HSPs)
chr6 (233-318)||(17511749-17511833)
chr6 (233-316)||(8668419-8668501)
chr6 (214-308)||(25905300-25905398)
chr6 (241-318)||(2852103-2852179)
chr6 (214-298)||(23109746-23109831)
chr6 (214-318)||(18866033-18866144)
chr6 (233-310)||(30636831-30636908)
chr6 (233-275)||(10259521-10259562)
chr6 (236-269)||(13155215-13155248)
chr6 (236-269)||(13160071-13160104)
chr6 (233-269)||(13174814-13174850)
[»] chr1 (6 HSPs)
chr1 (210-316)||(29029457-29029562)
chr1 (232-310)||(23551578-23551657)
chr1 (215-316)||(36571173-36571275)
chr1 (233-317)||(26905612-26905696)
chr1 (214-308)||(25882543-25882640)
chr1 (214-261)||(21918876-21918926)
[»] scaffold0206 (1 HSPs)
scaffold0206 (233-318)||(2684-2768)
[»] scaffold0482 (1 HSPs)
scaffold0482 (233-317)||(4072-4156)
[»] chr5 (16 HSPs)
chr5 (233-317)||(42731961-42732045)
chr5 (233-310)||(2642382-2642459)
chr5 (230-310)||(11017597-11017677)
chr5 (233-317)||(26653393-26653477)
chr5 (233-317)||(26924978-26925062)
chr5 (233-299)||(2315449-2315515)
chr5 (233-318)||(11223954-11224040)
chr5 (214-318)||(35586753-35586858)
chr5 (233-308)||(24243738-24243815)
chr5 (233-308)||(24290362-24290439)
chr5 (233-308)||(24299873-24299950)
chr5 (205-299)||(31150132-31150228)
chr5 (233-278)||(20036682-20036727)
chr5 (233-278)||(20038846-20038891)
chr5 (243-308)||(13814958-13815025)
chr5 (214-261)||(22117514-22117562)
[»] scaffold0010 (1 HSPs)
scaffold0010 (233-308)||(257482-257559)
[»] scaffold0269 (1 HSPs)
scaffold0269 (214-308)||(23937-24034)
[»] scaffold0334 (1 HSPs)
scaffold0334 (214-261)||(11984-12034)
[»] scaffold0247 (1 HSPs)
scaffold0247 (233-308)||(25278-25354)


Alignment Details
Target: chr4 (Bit Score: 250; Significance: 1e-139; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 55 - 421
Target Start/End: Original strand, 26331240 - 26331608
Alignment:
Q  55 taagttttgtgagtgaattagcaatgaatagcttccattgccacatcctctggttctttgtgaggcccctacaaaagttttatatttcannnnnnn--gc 152  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || | |||||||||||||||         ||    
T  26331240 taagttttgtgagtgaattagcaatgaatagcttccattgccacatcctctggttctttgtgagaccc-taaacaagttttatatttcatatttttttgc 26331338  T
Q  153 ctaataaaaaatcaaaccatttacctttagataagaaacacagcagcgtaacctgaggtaacaataaatgtcgcaagaaaggggtttgaattgtgaccat 252  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |    
T  26331339 ctaacaaaaaatcaaaccatttatctttagataagaaacacagcagcgtaacctgaggtagcaataaacgtcgcaagaaaggggtttgaattgtgaccct 26331438  T
Q  253 ttttaaatttaatcctaaaactttaacaagtttatatactcaag-aaatttcttggtaaaggttagaaaaatgtaagattatatatttttgatataaagc 351  Q
    ||||||||||||| || ||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||| |||||||| ||||||||||| |     
T  26331439 ttttaaatttaattctgaaactttaacaagtttatatactcacgaaaatttcttggtaaaggttagacaaatgtaaaattatatagttttgatataaggt 26331538  T
Q  352 aaccgttatatcaagaacctgtatattctggattaaataaagtttataagaatcttttaactaggaccat 421  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26331539 aaccgttatatcaagaagctgtatattctagattaaataaagtttataagaatcttttaactaggaccat 26331608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 235 - 318
Target Start/End: Original strand, 50516011 - 50516093
Alignment:
Q  235 ggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggttaga 318  Q
    |||||||||||||||| ||||||||||||||| | |||| ||||||||||||| ||||||||||| | |||| |||| ||||||    
T  50516011 ggtttgaattgtgaccctttttaaatttaatcgtgaaac-ttaacaagtttatgtactcaagaaaatccttgataaatgttaga 50516093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 233 - 310
Target Start/End: Complemental strand, 25516244 - 25516167
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaa 310  Q
    |||||||||||| ||||| |||| ||| ||| |||| |||||| || |||||||||||||||||||| ||||||||||    
T  25516244 ggggtttgaattatgacccttttaaaaattattcctcaaacttaaataagtttatatactcaagaaagttcttggtaa 25516167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 310
Target Start/End: Complemental strand, 28070918 - 28070842
Alignment:
Q  234 gggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaa 310  Q
    ||||||||||||||||  |||| ||| ||| | ||||||||| ||||||||||||||||||||||| || |||||||    
T  28070918 gggtttgaattgtgacacttttaaaaattatttctaaaacttaaacaagtttatatactcaagaaagttattggtaa 28070842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 236 - 310
Target Start/End: Original strand, 25537462 - 25537536
Alignment:
Q  236 gtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaa 310  Q
    ||||||||||||||| |||| ||| ||| || | |||||| || |||||||||||||||||||| ||||||||||    
T  25537462 gtttgaattgtgacccttttaaaaattattcttcaaacttaaataagtttatatactcaagaaagttcttggtaa 25537536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 233 - 310
Target Start/End: Complemental strand, 2033802 - 2033725
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaa 310  Q
    |||||||||| ||||||| |||| ||| ||| |||| |||||| || |||||||||||||||||||| || |||||||    
T  2033802 ggggtttgaactgtgacccttttaaaaattattcctcaaacttaaataagtttatatactcaagaaagttattggtaa 2033725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 309
Target Start/End: Original strand, 41902132 - 41902210
Alignment:
Q  231 aaggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaa-gtttatatactcaagaaatttcttggta 309  Q
    |||||||||||| ||||||| ||||||| |||||| || |||||| ||||| |||||| ||||||||||| |||||||||    
T  41902132 aaggggtttgaactgtgaccttttttaa-tttaattctgaaacttaaacaaagtttatgtactcaagaaaattcttggta 41902210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 233 - 310
Target Start/End: Original strand, 50065116 - 50065193
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaa 310  Q
    |||||||||||||| ||  |||| ||| ||| | || |||||| || |||||||||||||||||||| ||||||||||    
T  50065116 ggggtttgaattgtaactcttttaaaaattatttctcaaacttaaataagtttatatactcaagaaagttcttggtaa 50065193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 23623592 - 23623495
Alignment:
Q  214 caataaatgtcgcaagaaagggg--tttgaattgtgaccatttt-taaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggt 308  Q
    ||||||| ||| |||||||||||  |||||||||||||| ||||  ||||||| |||| |||||| || |||| ||||  ||||||||| ||||||||    
T  23623592 caataaacgtcacaagaaaggggggtttgaattgtgacccttttaaaaatttattcctgaaacttaaataagtatataggctcaagaaaattcttggt 23623495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 316
Target Start/End: Complemental strand, 45610036 - 45609994
Alignment:
Q  274 tttaacaagtttatatactcaagaaatttcttggtaaaggtta 316  Q
    |||||||||||||| ||||||||||| |||||||| |||||||    
T  45610036 tttaacaagtttatgtactcaagaaaattcttggtgaaggtta 45609994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 6e-38; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 214 - 420
Target Start/End: Original strand, 34969627 - 34969837
Alignment:
Q  214 caataaatgtcgcaagaaagggg---tttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactc-aagaaatttcttggta 309  Q
    ||||||| | |||||||||||||   |||||||||||||  ||||||| |||||||| ||||||||||||||||| ||||||| || |||||||||||||    
T  34969627 caataaacgccgcaagaaaggggaagtttgaattgtgacactttttaattttaatccaaaaactttaacaagtttttatactctaaaaaatttcttggta 34969726  T
Q  310 aaggttagaaaaatgtaagattatatatttttgatataaagcaaccgttatatcaagaacctgtatattctggattaaataaagtttataagaatctttt 409  Q
    ||||||||| ||||  || ||||||||||||| |||||||||||  ||||||||||| | |   ||||| ||||||||| ||||||||||   | |||||    
T  34969727 aaggttagacaaatacaatattatatattttttatataaagcaattgttatatcaaggagcaaaatattttggattaaacaaagtttatagacagctttt 34969826  T
Q  410 aactaggacca 420  Q
    ||||| |||||    
T  34969827 aactaagacca 34969837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 233 - 318
Target Start/End: Complemental strand, 12768340 - 12768256
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggttaga 318  Q
    |||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| ||||||||||| ||||||||||| ||||||    
T  12768340 ggggtttgaattgtgaccctttttaaatttaatcctgaaac-ttaacaagtttatgtactcaagaaaattcttggtaaatgttaga 12768256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 233 - 318
Target Start/End: Original strand, 42711823 - 42711907
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggttaga 318  Q
    |||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| ||||||||||| ||||||||||| ||||||    
T  42711823 ggggtttgaattgtgaccctttttaaatttaatcctgaaac-ttaacaagtttatgtactcaagaaaattcttggtaaatgttaga 42711907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 234 - 318
Target Start/End: Complemental strand, 20047849 - 20047766
Alignment:
Q  234 gggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggttaga 318  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||||| ||||||||||||||||| ||||||||||| ||||||    
T  20047849 gggtttgaattgtgaccctttttaaatttaatcctgaaac-ttaacaactttatatactcaagaaaattcttggtaaatgttaga 20047766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 230 - 316
Target Start/End: Original strand, 13958990 - 13959076
Alignment:
Q  230 aaaggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggtta 316  Q
    |||||||||||||||||||||||||| ||| ||| |||| |||||| || |||||||||||||||||||| ||||||||||| ||||    
T  13958990 aaaggggtttgaattgtgaccattttaaaaattattcctcaaacttaaataagtttatatactcaagaaagttcttggtaaaagtta 13959076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 233 - 310
Target Start/End: Complemental strand, 989271 - 989194
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaa 310  Q
    |||||||||||||||||| |||| ||| ||| ||||||||||| || |||||||||||||||||||| ||||||||||    
T  989271 ggggtttgaattgtgacccttttaaaaattattcctaaaacttaaataagtttatatactcaagaaagttcttggtaa 989194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 233 - 318
Target Start/End: Complemental strand, 20030838 - 20030754
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggttaga 318  Q
    ||||||||||||||||||  |||||||||||||||| |||| ||||||| ||||||||||||| ||| ||||||||||| ||||||    
T  20030838 ggggtttgaattgtgaccccttttaaatttaatcctgaaac-ttaacaactttatatactcaataaaattcttggtaaatgttaga 20030754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 233 - 317
Target Start/End: Original strand, 7788643 - 7788727
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggttag 317  Q
    |||||||||||||||||| |||| ||||||| ||||  ||||| ||||||| |||||||||||||| |||||||||||| |||||    
T  7788643 ggggtttgaattgtgacccttttaaaatttagtcctgcaacttaaacaagtatatatactcaagaagtttcttggtaaatgttag 7788727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 233 - 317
Target Start/End: Original strand, 31574801 - 31574885
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggttag 317  Q
    |||||||||||||||||| |||| ||||||| ||||  ||||| || |||| ||||||||||||||| ||||||||||| |||||    
T  31574801 ggggtttgaattgtgacccttttaaaatttagtcctgcaacttaaataagtatatatactcaagaaagttcttggtaaatgttag 31574885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 233 - 308
Target Start/End: Original strand, 25036625 - 25036702
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaa--caagtttatatactcaagaaatttcttggt 308  Q
    |||||||||||||||||| |||||||| ||| |||| |||||||||  ||||||||||||||||||||  ||||||||    
T  25036625 ggggtttgaattgtgaccctttttaaaattattcctgaaactttaaatcaagtttatatactcaagaatgttcttggt 25036702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 233 - 308
Target Start/End: Original strand, 25050662 - 25050739
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaa--caagtttatatactcaagaaatttcttggt 308  Q
    |||||||||||||||||| |||||||| ||| |||| |||||||||  ||||||||||||||||||||  ||||||||    
T  25050662 ggggtttgaattgtgaccctttttaaaattattcctgaaactttaaatcaagtttatatactcaagaatgttcttggt 25050739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 214 - 317
Target Start/End: Complemental strand, 15834801 - 15834695
Alignment:
Q  214 caataaatgtcgcaagaaagggg---tttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaa 310  Q
    ||||||| ||||||||||| |||   |||||||||||| | |||| ||||||| |||| |||||| || |||||||||||||||||||   |||||||||    
T  15834801 caataaacgtcgcaagaaatgggaggtttgaattgtgaaccttttaaaatttattcctgaaacttaaataagtttatatactcaagaaggctcttggtaa 15834702  T
Q  311 aggttag 317  Q
    | |||||    
T  15834701 atgttag 15834695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 233 - 308
Target Start/End: Original strand, 18882751 - 18882828
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaa--caagtttatatactcaagaaatttcttggt 308  Q
    |||||||||||||||||| |||||||| ||| |||| |||||||||  ||||| ||||||||||||||  ||||||||    
T  18882751 ggggtttgaattgtgaccctttttaaaattattcctgaaactttaaatcaagtatatatactcaagaatgttcttggt 18882828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 316
Target Start/End: Original strand, 24095486 - 24095566
Alignment:
Q  236 gtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggtta 316  Q
    ||||||||||||||| |||| ||||||| ||||  ||||| || |||||||||||||||||||  |||| |||||| ||||    
T  24095486 gtttgaattgtgacccttttaaaatttagtcctgcaacttaaataagtttatatactcaagaaggttctgggtaaatgtta 24095566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 308
Target Start/End: Complemental strand, 18252353 - 18252245
Alignment:
Q  205 ctgaggtaacaataaatgtcgcaagaaagggg---tttgaattgtgaccatttttaaatttaatcctaaaactttaa--caagtttatatactcaagaaa 299  Q
    |||| ||| ||||||  |||||||||||||||   |||||||||||||| |||||||| ||| |||| |||||||||  ||||| ||| ||||||||||     
T  18252353 ctgaagtagcaataatcgtcgcaagaaagggggggtttgaattgtgaccctttttaaaattattcctgaaactttaaatcaagtatatgtactcaagaat 18252254  T
Q  300 tttcttggt 308  Q
     ||||||||    
T  18252253 gttcttggt 18252245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 308
Target Start/End: Complemental strand, 18233420 - 18233343
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaa--caagtttatatactcaagaaatttcttggt 308  Q
    |||||||||||||||||| |||||||| ||| |||| |||||||||  ||||| ||| ||||||||||  ||||||||    
T  18233420 ggggtttgaattgtgaccctttttaaaattattcctgaaactttaaatcaagtatatgtactcaagaatgttcttggt 18233343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 308
Target Start/End: Complemental strand, 18242871 - 18242794
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaa--caagtttatatactcaagaaatttcttggt 308  Q
    |||||||||||||||||| |||||||| ||| |||| |||||||||  ||||| ||| ||||||||||  ||||||||    
T  18242871 ggggtttgaattgtgaccctttttaaaattattcctgaaactttaaatcaagtatatgtactcaagaatgttcttggt 18242794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 238 - 308
Target Start/End: Original strand, 4843301 - 4843373
Alignment:
Q  238 ttgaattgtgaccatttttaaatttaatcctaaaactttaa--caagtttatatactcaagaaatttcttggt 308  Q
    ||||||||||| | |||||||| ||| |||| |||||||||  ||||||||||||||||||||  ||||||||    
T  4843301 ttgaattgtgagcctttttaaaattattcctgaaactttaaatcaagtttatatactcaagaatgttcttggt 4843373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 310
Target Start/End: Complemental strand, 7838752 - 7838675
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaa 310  Q
    |||||||||||||||||| |||| ||| ||| |  | |||||| || |||||||||||||| ||||| || |||||||    
T  7838752 ggggtttgaattgtgacccttttaaaaattatttatgaaacttaaataagtttatatactctagaaagttattggtaa 7838675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 308
Target Start/End: Complemental strand, 24634418 - 24634313
Alignment:
Q  205 ctgaggtaacaataaatgtcgcaagaaaggg---gtttgaattgtgaccatttttaaatttaatcctaaaactttaa-caagtttatatactcaagaaat 300  Q
    |||| ||| ||||||||||| ||||||||||   |||||||||||||||  ||||||| ||| | || |||||||||  |||||| |||||||||||||     
T  24634418 ctgaagtagcaataaatgtcacaagaaagggggtgtttgaattgtgacc-cttttaaaattatttctgaaactttaattaagttt-tatactcaagaaaa 24634321  T
Q  301 ttcttggt 308  Q
    ||||||||    
T  24634320 ttcttggt 24634313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 33591561 - 33591611
Alignment:
Q  214 caataaatgtcgcaagaaagggg---tttgaattgtgaccatttttaaatt 261  Q
    ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  33591561 caataaatgtcacaagaaagggggggtttgaattgtgaccctttttaaatt 33591611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 33601150 - 33601200
Alignment:
Q  214 caataaatgtcgcaagaaagggg---tttgaattgtgaccatttttaaatt 261  Q
    ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  33601150 caataaatgtcacaagaaagggggggtttgaattgtgaccctttttaaatt 33601200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 232 - 322
Target Start/End: Complemental strand, 28344854 - 28344765
Alignment:
Q  232 aggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggttagaaaaa 322  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  28344854 aggggtttgaattgtgaccatttttaaatttaatcctgaaac-ttaacaagtttatgtactcaagaaaattcttggtaaatgttagaaaaa 28344765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 233 - 318
Target Start/End: Original strand, 48709380 - 48709464
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggttaga 318  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||  |||| ||||| ||||| ||||| ||||||    
T  48709380 ggggtttgaattgtgaccctttttaaatttaatcctaaaac-ttaacaagtttatgcactcgagaaaattcttagtaaatgttaga 48709464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 236 - 318
Target Start/End: Complemental strand, 32818729 - 32818649
Alignment:
Q  236 gtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggttaga 318  Q
    |||||||||| |||| |||| |||||||||||| |||||| ||||||||||| ||||| ||||| ||||||||||| ||||||    
T  32818729 gtttgaattgcgaccctttt-aaatttaatcctgaaactt-aacaagtttatgtactcgagaaaattcttggtaaatgttaga 32818649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 308
Target Start/End: Original strand, 11634024 - 11634101
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaa--caagtttatatactcaagaaatttcttggt 308  Q
    |||||||||||||||||| |||||||| ||| |||| |||||||||  ||||| ||| ||||||||||  ||||||||    
T  11634024 ggggtttgaattgtgaccctttttaaaattattcctgaaactttaaatcaagtatatgtactcaagaatgttcttggt 11634101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 291
Target Start/End: Original strand, 39377204 - 39377258
Alignment:
Q  237 tttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatac 291  Q
    ||||||||||||||||||||||||||||| ||  ||||||||||| |||| ||||    
T  39377204 tttgaattgtgaccatttttaaatttaattctggaactttaacaaatttacatac 39377258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 13875145 - 13875087
Alignment:
Q  205 ctgaggtaacaataaatgtcgcaagaaa--ggggtttgaattgtgaccatttttaaatt 261  Q
    |||| ||| ||||||||||| |||||||  |||||||||||||||||| ||||||||||    
T  13875145 ctgaagtagcaataaatgtcacaagaaatgggggtttgaattgtgaccctttttaaatt 13875087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 311
Target Start/End: Complemental strand, 16494312 - 16494276
Alignment:
Q  275 ttaacaagtttatatactcaagaaatttcttggtaaa 311  Q
    ||||||||||||||||||||||||| || ||||||||    
T  16494312 ttaacaagtttatatactcaagaaaatttttggtaaa 16494276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 233 - 318
Target Start/End: Complemental strand, 124645 - 124561
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggttaga 318  Q
    |||||||||||||||||| ||||||||||||||||| |||| ||||||| ||||||||||||||||| ||||||||||| ||||||    
T  124645 ggggtttgaattgtgaccctttttaaatttaatcctgaaac-ttaacaactttatatactcaagaaaattcttggtaaatgttaga 124561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 205 - 299
Target Start/End: Complemental strand, 100624 - 100528
Alignment:
Q  205 ctgaggtaacaataaatgtcgcaagaaagggg--tttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaa 299  Q
    |||| ||||||||||| ||| |||||||||||  |||||||||||||| |||| ||||||| |||| |||||| || |||| ||||  |||||||||    
T  100624 ctgaagtaacaataaacgtcacaagaaaggggggtttgaattgtgacccttttaaaatttattcctgaaacttaaataagtatataagctcaagaaa 100528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 233 - 318
Target Start/End: Original strand, 13327820 - 13327904
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggttaga 318  Q
    |||||||||||||||||| ||||||||||||||||| |||| ||||||| ||||||||||||||||| ||||||||||| ||||||    
T  13327820 ggggtttgaattgtgaccctttttaaatttaatcctgaaac-ttaacaactttatatactcaagaaaattcttggtaaatgttaga 13327904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 233 - 318
Target Start/End: Complemental strand, 23487769 - 23487685
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggttaga 318  Q
    |||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| ||||||||||| ||||||||||| ||||||    
T  23487769 ggggtttgaattgtgaccctttttaaatttaatcctgaaac-ttaacaagtttatgtactcaagaaaattcttggtaaatgttaga 23487685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 230 - 316
Target Start/End: Original strand, 4307398 - 4307483
Alignment:
Q  230 aaaggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggtta 316  Q
    ||||||||||||||||||||| |||| ||||| | |||| |||||||||||||||||||||||||||||| || |||||||| ||||    
T  4307398 aaaggggtttgaattgtgacccttttaaaatt-attcctgaaactttaacaagtttatatactcaagaaagtttttggtaaatgtta 4307483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 233 - 310
Target Start/End: Original strand, 36432176 - 36432253
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaa 310  Q
    |||||||||||||||||| |||| ||| ||| |||| |||||| || |||||||||||||||||||| ||||||||||    
T  36432176 ggggtttgaattgtgacccttttaaaaattattccttaaacttgaataagtttatatactcaagaaagttcttggtaa 36432253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 233 - 310
Target Start/End: Complemental strand, 35125965 - 35125888
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaa 310  Q
    |||||||||||||||||| |||| ||| ||| | || |||||| || |||||||||||||||||||| ||||||||||    
T  35125965 ggggtttgaattgtgacccttttaaaaattatttctcaaacttaaataagtttatatactcaagaaagttcttggtaa 35125888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 231 - 293
Target Start/End: Original strand, 9292155 - 9292217
Alignment:
Q  231 aaggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactc 293  Q
    |||||||||||||||| ||| |||| ||||||| ||||||||||| || ||||||||||||||    
T  9292155 aaggggtttgaattgtaacccttttaaaatttattcctaaaacttaaataagtttatatactc 9292217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 308
Target Start/End: Complemental strand, 19389484 - 19389390
Alignment:
Q  217 taaatgtcgcaagaaagggg---tttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggt 308  Q
    |||| |||||||||||||||   |||||||||| ||| |||| ||| ||| ||||||||||| ||  | ||||||||||||||||| ||||||||    
T  19389484 taaacgtcgcaagaaagggggagtttgaattgtaacccttttaaaaattattcctaaaacttaaatcaatttatatactcaagaaagttcttggt 19389390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 308
Target Start/End: Complemental strand, 54625337 - 54625231
Alignment:
Q  205 ctgaggtaacaataaatgtcgcaagaaa--ggggtttgaattgtgaccatttt-taaatttaatcctaaaactttaacaagtttatatactcaagaaatt 301  Q
    |||| ||| ||||||| ||| |||||||  |||||||||||||||||| ||||  ||||||| |||| |||||| || |||| ||||  ||||||||| |    
T  54625337 ctgaagtagcaataaacgtcacaagaaaagggggtttgaattgtgacccttttaaaaatttattcctgaaacttaaataagtatataggctcaagaaaat 54625238  T
Q  302 tcttggt 308  Q
    |||||||    
T  54625237 tcttggt 54625231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 7783348 - 7783434
Alignment:
Q  231 aaggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggttag 317  Q
    |||||||||||||| ||||| |||| ||||||| ||||  ||||| || |||| | ||| ||||||||  ||||||||||| |||||    
T  7783348 aaggggtttgaattatgacccttttaaaatttagtcctgcaacttaaataagtatgtatgctcaagaagattcttggtaaatgttag 7783434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 310
Target Start/End: Complemental strand, 37920692 - 37920615
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaa 310  Q
    |||||||||||||||||  |||| ||| ||| || | |||||| || |||||||||||||||| ||| || |||||||    
T  37920692 ggggtttgaattgtgactcttttaaaaattattcatcaaacttaaataagtttatatactcaaaaaagtttttggtaa 37920615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 24874723 - 24874773
Alignment:
Q  214 caataaatgtcgcaagaaagggg---tttgaattgtgaccatttttaaatt 261  Q
    ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  24874723 caataaatgtcacaagaaagggggggtttgaattgtgaccctttttaaatt 24874773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 3e-24; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 233 - 318
Target Start/End: Complemental strand, 35878062 - 35877978
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggttaga 318  Q
    |||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| ||||||||||| ||||||||||| ||||||    
T  35878062 ggggtttgaattgtgaccctttttaaatttaatcctgaaac-ttaacaagtttatgtactcaagaaaattcttggtaaatgttaga 35877978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 233 - 318
Target Start/End: Complemental strand, 35885551 - 35885467
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggttaga 318  Q
    |||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| ||||||||||| ||||||||||| ||||||    
T  35885551 ggggtttgaattgtgaccctttttaaatttaatcctgaaac-ttaacaagtttatgtactcaagaaaattcttggtaaatgttaga 35885467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 233 - 318
Target Start/End: Complemental strand, 36725264 - 36725180
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggttaga 318  Q
    |||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| ||||||||||| ||||||||||| ||||||    
T  36725264 ggggtttgaattgtgaccctttttaaatttaatcctgaaac-ttaacaagtttatgtactcaagaaaattcttggtaaatgttaga 36725180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 317
Target Start/End: Complemental strand, 14273935 - 14273851
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggttag 317  Q
    ||||||| |||||||||| |||| ||||||||||||  ||||| || |||| ||||||||||||||  ||||||||||| |||||    
T  14273935 ggggtttaaattgtgacccttttaaaatttaatcctgcaacttaaataagtatatatactcaagaaggttcttggtaaatgttag 14273851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 22633081 - 22632985
Alignment:
Q  214 caataaatgtcgcaagaaagggg--tttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggt 308  Q
    ||||||||||| |||||||||||  |||||||||||||| |||| ||||||| |||| |||||| |  |||| ||||  ||||||||| ||||||||    
T  22633081 caataaatgtcacaagaaaggggggtttgaattgtgacccttttaaaatttattcctgaaacttaagtaagtatataagctcaagaaaattcttggt 22632985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 299
Target Start/End: Complemental strand, 37911250 - 37911204
Alignment:
Q  253 ttttaaatttaatcctaaaactttaacaagtttatatactcaagaaa 299  Q
    |||||||| ||||||||||||||||| | | ||||||||||||||||    
T  37911250 ttttaaatgtaatcctaaaactttaaaatgcttatatactcaagaaa 37911204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 278
Target Start/End: Complemental strand, 3397651 - 3397584
Alignment:
Q  214 caataaatgtcgcaagaaagggg---tttgaattgtgaccatttttaaatttaatcctaaaactttaa 278  Q
    ||||||| ||| |||||||||||   |||||||||||||| |||||||| ||| |||| |||||||||    
T  3397651 caataaacgtcacaagaaagggggagtttgaattgtgaccctttttaaaattattcctgaaactttaa 3397584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 7e-22; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 233 - 318
Target Start/End: Original strand, 17511749 - 17511833
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggttaga 318  Q
    ||||||||||||||||||||||||||||||||| || |||| ||||||| ||||||||||||||||| ||||||| ||| ||||||    
T  17511749 ggggtttgaattgtgaccatttttaaatttaattctgaaac-ttaacaactttatatactcaagaaaattcttggcaaatgttaga 17511833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 8668419 - 8668501
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggtta 316  Q
    |||||||||||||||||| |||| |||||||||||| |||| ||||||||||||| ||||||||||| ||||||||||| ||||    
T  8668419 ggggtttgaattgtgacccttttaaaatttaatcctgaaac-ttaacaagtttatgtactcaagaaaattcttggtaaatgtta 8668501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 25905398 - 25905300
Alignment:
Q  214 caataaatgtcgcaagaaaggg--gtttgaattgtgaccatttttaaatttaatcctaaaactttaa--caagtttatatactcaagaaatttcttggt 308  Q
    |||||| |||||||||||||||  ||||||||||||||| |||||||| ||| | || |||||||||  ||||| ||||||||||||||||||||||||    
T  25905398 caataattgtcgcaagaaagggaggtttgaattgtgaccctttttaaaattattactgaaactttaaatcaagtatatatactcaagaaatttcttggt 25905300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 241 - 318
Target Start/End: Complemental strand, 2852179 - 2852103
Alignment:
Q  241 aattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggttaga 318  Q
    |||||||||| ||||||| ||||||||| |||||| ||||||||||| ||||||||||| |||||| |||| ||||||    
T  2852179 aattgtgaccctttttaattttaatcctgaaactt-aacaagtttatgtactcaagaaaattcttgataaatgttaga 2852103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 214 - 298
Target Start/End: Original strand, 23109746 - 23109831
Alignment:
Q  214 caataaatgtcgcaagaaagggg-tttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaa 298  Q
    |||||||||||| |||||||||| |||||||  ||||| ||||||| ||||||||| |||| | || |||||||||||||||||||    
T  23109746 caataaatgtcgtaagaaagggggtttgaatgatgaccctttttaattttaatcctgaaacctaaaaaagtttatatactcaagaa 23109831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 18866033 - 18866144
Alignment:
Q  214 caataaatgtcgcaagaaagggg---tttgaattgtgaccatttttaaatttaatcctaaaacttt-aacaagtttatatactcaag---aaatttcttg 306  Q
    ||||||| |||||||||||||||   |||||||||||||| ||||||| ||||||| | ||||||| ||  ||||||||||||||||   ||| ||||||    
T  18866033 caataaacgtcgcaagaaagggggagtttgaattgtgaccctttttaattttaatcttgaaactttaaatgagtttatatactcaagaataaagttcttg 18866132  T
Q  307 gtaaaggttaga 318  Q
    |||| |||||||    
T  18866133 gtaatggttaga 18866144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 233 - 310
Target Start/End: Complemental strand, 30636908 - 30636831
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaa 310  Q
    |||||||||||||||||| |||| ||| ||| | || |||||| || || ||||||||||||||||| ||||||||||    
T  30636908 ggggtttgaattgtgacccttttaaaaattatttctgaaacttaaataaatttatatactcaagaaagttcttggtaa 30636831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 275
Target Start/End: Original strand, 10259521 - 10259562
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactt 275  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  10259521 ggggtttgaattgtgacc-tttttaaatttaatcctaaaactt 10259562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 236 - 269
Target Start/End: Complemental strand, 13155248 - 13155215
Alignment:
Q  236 gtttgaattgtgaccatttttaaatttaatccta 269  Q
    ||||||||||||||||||||||||||||||||||    
T  13155248 gtttgaattgtgaccatttttaaatttaatccta 13155215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 236 - 269
Target Start/End: Complemental strand, 13160104 - 13160071
Alignment:
Q  236 gtttgaattgtgaccatttttaaatttaatccta 269  Q
    ||||||||||||||||||||||||||||||||||    
T  13160104 gtttgaattgtgaccatttttaaatttaatccta 13160071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 269
Target Start/End: Complemental strand, 13174850 - 13174814
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatccta 269  Q
    ||||||||||||||||| |||||||||||||||||||    
T  13174850 ggggtttgaattgtgactatttttaaatttaatccta 13174814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 5e-20; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 210 - 316
Target Start/End: Original strand, 29029457 - 29029562
Alignment:
Q  210 gtaacaataaatgtcgcaagaaaggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggta 309  Q
    ||||||||||  || ||||||| |||||||||||||| ||| ||||||| |||||| || |||||||||||| ||| ||||||||||||||||||| |||    
T  29029457 gtaacaataatcgttgcaagaa-ggggtttgaattgttaccctttttaattttaattctgaaactttaacaaatttttatactcaagaaatttcttagta 29029555  T
Q  310 aaggtta 316  Q
    || ||||    
T  29029556 aatgtta 29029562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 310
Target Start/End: Complemental strand, 23551657 - 23551578
Alignment:
Q  232 aggggtttgaattgtgaccatttttaaatttaatcctaaaactttaac-aagtttatatactcaagaaatttcttggtaa 310  Q
    ||||||||||||||||||| |||| ||| ||| |||| |||||| ||  |||||||||||||||||||| ||||||||||    
T  23551657 aggggtttgaattgtgacccttttaaaaattattcctcaaacttaaaataagtttatatactcaagaaaattcttggtaa 23551578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 215 - 316
Target Start/End: Original strand, 36571173 - 36571275
Alignment:
Q  215 aataaatgtcgcaagaaag---gggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaa 311  Q
    |||||| ||||||||||||   ||||||||||||||||| |||||||||| | || | |||||| | ||| ||||||||||||||||| |||||||||||    
T  36571173 aataaacgtcgcaagaaagagagggtttgaattgtgaccctttttaaatt-attcttgaaacttaatcaa-tttatatactcaagaaaattcttggtaaa 36571270  T
Q  312 ggtta 316  Q
     ||||    
T  36571271 tgtta 36571275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 233 - 317
Target Start/End: Original strand, 26905612 - 26905696
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggttag 317  Q
    |||||||||||||||||| |||| ||| ||| |||| |||||| |  ||||||||||||||||||   ||||||||||| |||||    
T  26905612 ggggtttgaattgtgacccttttaaaaattattcctgaaacttaagtaagtttatatactcaagatggttcttggtaaatgttag 26905696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 25882640 - 25882543
Alignment:
Q  214 caataaatgtcgcaagaaagggg--tttgaattgtgaccatttt-taaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggt 308  Q
    ||||||| ||| |||||||||||  |||||||||||||| ||||  ||||||| |||| |||||| ||| ||| ||||  ||||||||| ||||||||    
T  25882640 caataaacgtcacaagaaaggggggtttgaattgtgacccttttaaaaatttattcctgaaacttaaactagtatataagctcaagaaaattcttggt 25882543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 21918876 - 21918926
Alignment:
Q  214 caataaatgtcgcaagaaagggg---tttgaattgtgaccatttttaaatt 261  Q
    ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  21918876 caataaatgtcacaagaaagggggggtttgaattgtgaccctttttaaatt 21918926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 233 - 318
Target Start/End: Complemental strand, 2768 - 2684
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggttaga 318  Q
    ||||||||||||||||||  |||||||||||||||| |||| ||||||| ||||||||||||| ||| ||||||||||| ||||||    
T  2768 ggggtttgaattgtgaccccttttaaatttaatcctgaaac-ttaacaactttatatactcaataaaattcttggtaaatgttaga 2684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 233 - 317
Target Start/End: Complemental strand, 4156 - 4072
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggttag 317  Q
    |||||||||||||||||| |||| ||||||| ||||  ||||| ||||||| |||||||||||||| |||||||||||| |||||    
T  4156 ggggtttgaattgtgacccttttaaaatttagtcctgcaacttaaacaagtatatatactcaagaagtttcttggtaaatgttag 4072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 233 - 317
Target Start/End: Original strand, 42731961 - 42732045
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggttag 317  Q
    |||||||||||||||||| |||| ||||||| ||||  ||||| || |||| ||||||||||||||| ||||||||||| |||||    
T  42731961 ggggtttgaattgtgacccttttaaaatttagtcctgcaacttaaataagtatatatactcaagaaaattcttggtaaatgttag 42732045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 233 - 310
Target Start/End: Complemental strand, 2642459 - 2642382
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaa 310  Q
    |||||||||||||||||| |||| ||| ||| |||| |||||| |  |||||||||||||||||||| ||||||||||    
T  2642459 ggggtttgaattgtgacccttttaaaaattattcctcaaacttaagtaagtttatatactcaagaaagttcttggtaa 2642382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 230 - 310
Target Start/End: Original strand, 11017597 - 11017677
Alignment:
Q  230 aaaggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaa 310  Q
    ||||||||||||||||||||| |||| ||| ||| |||| |||||| || |||||||| ||||||||||| ||||| ||||    
T  11017597 aaaggggtttgaattgtgacccttttaaaaattagtcctgaaacttaaataagtttatctactcaagaaagttcttagtaa 11017677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 317
Target Start/End: Complemental strand, 26653477 - 26653393
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggttag 317  Q
    |||||||||||||||||| |||| ||||||| ||||  ||||| || |||| ||||||||||||||  ||||||||||| |||||    
T  26653477 ggggtttgaattgtgacccttttaaaatttagtcctgcaacttaaataagtatatatactcaagaaggttcttggtaaatgttag 26653393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 317
Target Start/End: Complemental strand, 26925062 - 26924978
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggttag 317  Q
    |||||||||||||||||| |||| ||||||| ||||  ||||| || |||| ||||||||||||||  ||||||||||| |||||    
T  26925062 ggggtttgaattgtgacccttttaaaatttagtcctgcaacttaaataagtatatatactcaagaaggttcttggtaaatgttag 26924978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 233 - 299
Target Start/End: Complemental strand, 2315515 - 2315449
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaa 299  Q
    |||||||||||||||||| |||| ||| ||| |||| |||||| || ||||||||||||||||||||    
T  2315515 ggggtttgaattgtgacccttttaaaaattattcctcaaacttaaataagtttatatactcaagaaa 2315449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 233 - 318
Target Start/End: Complemental strand, 11224040 - 11223954
Alignment:
Q  233 ggggtttgaattgtgacc--atttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaaggttaga 318  Q
    ||||||||||||||||||   |||||   ||||||||| |||| ||||||| ||||||||||||||||| ||||||||||| ||||||    
T  11224040 ggggtttgaattgtgaccctttttttttttttaatcctgaaac-ttaacaactttatatactcaagaaaattcttggtaaatgttaga 11223954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 35586858 - 35586753
Alignment:
Q  214 caataaatgtcgcaagaaa--ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggtaaa 311  Q
    |||||||  ||||||||||  ||||||||||| |||||| ||||||| ||||||||| |||||| |  | |||||| ||||||||||| ||||||||  |    
T  35586858 caataaacatcgcaagaaataggggtttgaatggtgaccctttttaa-tttaatcctgaaacttgacaaggtttatgtactcaagaaaattcttggttga 35586760  T
Q  312 ggttaga 318  Q
    |||||||    
T  35586759 ggttaga 35586753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 308
Target Start/End: Original strand, 24243738 - 24243815
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaa--caagtttatatactcaagaaatttcttggt 308  Q
    |||||||||||||||||| |||||||| ||| |||| |||||||||  ||||| ||| ||||||||||  ||||||||    
T  24243738 ggggtttgaattgtgaccctttttaaaattattcctgaaactttaaatcaagtatatgtactcaagaatgttcttggt 24243815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 308
Target Start/End: Original strand, 24290362 - 24290439
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaa--caagtttatatactcaagaaatttcttggt 308  Q
    |||||||||||||||||| |||||||| ||| |||| |||||||||  ||||| ||| ||||||||||  ||||||||    
T  24290362 ggggtttgaattgtgaccctttttaaaattattcctgaaactttaaatcaagtatatgtactcaagaatgttcttggt 24290439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 308
Target Start/End: Original strand, 24299873 - 24299950
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaa--caagtttatatactcaagaaatttcttggt 308  Q
    |||||||||||||||||| |||||||| ||| |||| |||||||||  ||||| ||| ||||||||||  ||||||||    
T  24299873 ggggtttgaattgtgaccctttttaaaattattcctgaaactttaaatcaagtatatgtactcaagaatgttcttggt 24299950  T

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Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 299
Target Start/End: Original strand, 31150132 - 31150228
Alignment:
Q  205 ctgaggtaacaataaatgtcgcaagaaagggg--tttgaattgtgaccatttttaaatttaatcctaaaactttaacaagtttatatactcaagaaa 299  Q
    |||| ||| ||||||| ||| |||||||||||  |||||||||||||| |||| ||||||| |||| |||||| || |||| ||||  |||||||||    
T  31150132 ctgaagtagcaataaacgtcacaagaaaggggggtttgaattgtgacccttttaaaatttattcctgaaacttaaataagtatataagctcaagaaa 31150228  T

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Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 20036727 - 20036682
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaa 278  Q
    |||||||||||||||||| |||||||| ||| |||| |||||||||    
T  20036727 ggggtttgaattgtgaccttttttaaaattattcctgaaactttaa 20036682  T

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Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 20038891 - 20038846
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaa 278  Q
    |||||||||||||||||| |||||||| ||| |||| |||||||||    
T  20038891 ggggtttgaattgtgaccctttttaaaattattcctgaaactttaa 20038846  T

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Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 308
Target Start/End: Original strand, 13814958 - 13815025
Alignment:
Q  243 ttgtgaccatttttaaatttaatcctaaaactttaa--caagtttatatactcaagaaatttcttggt 308  Q
    |||||||| |||||| | ||| |||| |||||||||  ||||||||||||||||||||  ||||||||    
T  13814958 ttgtgaccctttttagaattattcctgaaactttaaatcaagtttatatactcaagaatgttcttggt 13815025  T

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Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 22117514 - 22117562
Alignment:
Q  214 caataaatgtcgcaagaaagggg-tttgaattgtgaccatttttaaatt 261  Q
    ||||||| ||||||||||||||| |||||||||||||| |||| |||||    
T  22117514 caataaacgtcgcaagaaagggggtttgaattgtgacccttttaaaatt 22117562  T

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Target: scaffold0010 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 233 - 308
Target Start/End: Complemental strand, 257559 - 257482
Alignment:
Q  233 ggggtttgaattgtgaccatttttaaatttaatcctaaaactttaa--caagtttatatactcaagaaatttcttggt 308  Q
    |||||||||||||||||| |||||||| ||| |||| |||||||||  ||||| ||||||||||||||  ||||||||    
T  257559 ggggtttgaattgtgaccctttttaaaattattcctgaaactttaaatcaagtatatatactcaagaatgttcttggt 257482  T

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Target: scaffold0269 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 23937 - 24034
Alignment:
Q  214 caataaatgtcgcaagaaagggg--tttgaattgtgaccatttttaa-atttaatcctaaaactttaacaagtttatatactcaagaaatttcttggt 308  Q
    ||||||| ||| |||||||||||  |||||||||||||| |||| || ||||| |||| |||||| || |||| ||||  ||||||||| ||||||||    
T  23937 caataaacgtcacaagaaaggggggtttgaattgtgacccttttaaatatttattcctgaaacttaaataagtatataggctcaagaaaattcttggt 24034  T

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Target: scaffold0334 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 11984 - 12034
Alignment:
Q  214 caataaatgtcgcaagaaagggg---tttgaattgtgaccatttttaaatt 261  Q
    ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  11984 caataaatgtcacaagaaagggggggtttgaattgtgaccctttttaaatt 12034  T

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Target: scaffold0247 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 308
Target Start/End: Complemental strand, 25354 - 25278
Alignment:
Q  233 ggggtttgaattgtgaccatttt-taaatttaatcctaaaactttaacaagtttatatactcaagaaatttcttggt 308  Q
    |||||||||||||||||| ||||  ||||||| |||| |||||| || |||| ||||  ||||||||| ||||||||    
T  25354 ggggtttgaattgtgacccttttaaaaatttattcctgaaacttaaataagtatataatctcaagaaaattcttggt 25278  T

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