View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18404_high_78 (Length: 358)
Name: NF18404_high_78
Description: NF18404
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18404_high_78 |
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Alignment Details
Target: chr7 (Bit Score: 329; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 14 - 342
Target Start/End: Original strand, 28274689 - 28275017
Alignment:
| Q |
14 |
agcagagacaaatttctcagacatggtcacgggtagtatgcttacttcagatatgaaaactgctgatgtggaaaactattcatctggttttcaagttggt |
113 |
Q |
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| T |
28274689 |
agcagagacaaatttctcagacatggtcacgggtagtatgcttacttcagatatgaaaactgctgatgtggaaaactattcatctggttttcaagttggt |
28274788 |
T |
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| Q |
114 |
acttctgttaatcacaagaaatctgaagattcctgttgcacagatggagtagtaaatatttctaagggcgtttcaagcaccaattctgttcaatcgtcaa |
213 |
Q |
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| T |
28274789 |
acttctgttaatcacaagaaatctgaagattcctgttgcacagatggagtagtaaatatttctaagggcgtttcaagcaccaattctgttcaatcgtcaa |
28274888 |
T |
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| Q |
214 |
attttgttccatttattggttttccaatgtctaaagagaaaaattggtcatcagattctggaagctttgaacagagaagtaagaagcagcgttgctcgcc |
313 |
Q |
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| T |
28274889 |
attttgttccatttattggttttccaatgtctaaagagaaaaattggtcatcagattctggaagctttgaacagagaagtaagaagcagcgttgctcgcc |
28274988 |
T |
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| Q |
314 |
gatagaatcaaaagaagagaagttaaatt |
342 |
Q |
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| T |
28274989 |
gatagaatcaaaagaagagaagttaaatt |
28275017 |
T |
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