View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18404_low_175 (Length: 230)
Name: NF18404_low_175
Description: NF18404
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18404_low_175 |
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Alignment Details
Target: chr4 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 4052133 - 4051922
Alignment:
| Q |
4 |
ttctgcttcttcattttgtttcataagactagtgcatgtttggattaacgattgactgaattagagtgtgttaccgttgttttgacaaaaattggatttg |
103 |
Q |
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| T |
4052133 |
ttctgcttcttaattttgtttcataagactagtgcatgtttggattaacgattgactgaattagagtgtgttaccgttgttttgacaaaaattgaatttg |
4052034 |
T |
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| Q |
104 |
aagtttcaacaaattaaaattacggtgtcactgtaattttgtcaaaatttattgctaatttaagcaatgaatcctctttggttgatttttggctattttg |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4052033 |
aagtttcaacaaattaaaattacggtgtcactgtaattttgtcaaaatttattgctaatttaagcaatgaatcctctttggttgatttttggctattttg |
4051934 |
T |
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| Q |
204 |
ttacagtttgtg |
215 |
Q |
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|||||||||||| |
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| T |
4051933 |
ttacagtttgtg |
4051922 |
T |
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