View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18404_low_43 (Length: 467)
Name: NF18404_low_43
Description: NF18404
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18404_low_43 |
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Alignment Details
Target: chr7 (Bit Score: 433; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 433; E-Value: 0
Query Start/End: Original strand, 14 - 454
Target Start/End: Complemental strand, 25683361 - 25682921
Alignment:
| Q |
14 |
taacccttgtacttggctccgtttctttattaaaattcttatttgatgtttaaaacaaaattcctccaattttgagtagttaggaatgagaattaatgga |
113 |
Q |
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| T |
25683361 |
taacccttgtacttggctccgtttctttattaaaattcttatttgatgtttaaaacaaaattcctccaattttgagtagttaggaatgagaattaatgga |
25683262 |
T |
|
| Q |
114 |
gagactccaatgccaccatgcacgatgataaagttgacatatatatgctggagttagaacctactattatcaagaacctcgtgattgatagaaaatgaaa |
213 |
Q |
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| T |
25683261 |
gagactccaatgccaccatgcacgatgataaagttgacatatatatgctggagttagaacctactattatcaagaacctcgtgattgatagaaaatgaaa |
25683162 |
T |
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| Q |
214 |
agcaatttttccttttccatgcctttgttgagatgagtcatgcacgatccatgcatgcaaagaagatgcttcacacggttacgcacgagtgaggaatgaa |
313 |
Q |
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| T |
25683161 |
agcaatttttccttttccatgcctttgttgagatgagtcatgcacgatccatgcatgcaaagaagatgcttcacacggttacgcacgagtgaggaatgaa |
25683062 |
T |
|
| Q |
314 |
aaaggtacgtattgttttgccatctaccaaaatgcactctttttgaacctaaaaggaattgaagaatatatagacacagagagaggaaaattaatgagaa |
413 |
Q |
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| T |
25683061 |
aaaggtacgtattgttttgccatctaccaaaatgcactctttttgaacctaaaaggaattgaagaatatatagacacagagagaggaaaattaatgagca |
25682962 |
T |
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| Q |
414 |
aaattatatgaatgtaagtttcaatacttgcatatattcat |
454 |
Q |
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| T |
25682961 |
aaattaaatgaatgtaagtttcaatacttgcatatattcat |
25682921 |
T |
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