View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18406_high_68 (Length: 290)

Name: NF18406_high_68
Description: NF18406
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18406_high_68
NF18406_high_68
[»] scaffold0401 (1 HSPs)
scaffold0401 (1-194)||(8727-8918)
[»] chr1 (21 HSPs)
chr1 (1-194)||(14792518-14792709)
chr1 (7-194)||(18121509-18121694)
chr1 (8-186)||(38887049-38887225)
chr1 (1-194)||(44892355-44892546)
chr1 (33-194)||(41225441-41225600)
chr1 (33-194)||(41226694-41226853)
chr1 (35-128)||(21243746-21243838)
chr1 (1-152)||(24719466-24719615)
chr1 (43-146)||(39061275-39061375)
chr1 (42-153)||(21188030-21188138)
chr1 (152-194)||(21243841-21243883)
chr1 (7-61)||(24723312-24723366)
chr1 (42-158)||(11808187-11808288)
chr1 (1-61)||(16058262-16058329)
chr1 (6-58)||(51324544-51324596)
chr1 (128-194)||(8306510-8306577)
chr1 (151-194)||(17901905-17901948)
chr1 (95-138)||(40390112-40390155)
chr1 (151-195)||(6834074-6834118)
chr1 (151-194)||(21239146-21239189)
chr1 (89-152)||(12710814-12710877)
[»] chr6 (18 HSPs)
chr6 (1-194)||(7217199-7217389)
chr6 (1-194)||(22557154-22557344)
chr6 (1-194)||(23431395-23431593)
chr6 (1-194)||(18455028-18455219)
chr6 (33-194)||(25921907-25922066)
chr6 (45-194)||(31734613-31734760)
chr6 (1-194)||(32259751-32259941)
chr6 (89-194)||(23657994-23658099)
chr6 (42-144)||(1818909-1819008)
chr6 (1-61)||(21683030-21683090)
chr6 (42-123)||(25601326-25601406)
chr6 (36-110)||(31166230-31166302)
chr6 (42-153)||(18459253-18459362)
chr6 (151-194)||(29045170-29045213)
chr6 (1-78)||(28948597-28948672)
chr6 (37-81)||(13285767-13285809)
chr6 (75-144)||(18982371-18982439)
chr6 (89-153)||(24506157-24506220)
[»] chr4 (19 HSPs)
chr4 (1-194)||(19565873-19566064)
chr4 (1-194)||(46741105-46741296)
chr4 (7-194)||(12623222-12623407)
chr4 (1-194)||(33243242-33243440)
chr4 (35-194)||(40230212-40230369)
chr4 (42-194)||(44023599-44023749)
chr4 (89-194)||(33186808-33186913)
chr4 (100-194)||(12424345-12424439)
chr4 (1-109)||(26921464-26921570)
chr4 (1-144)||(2424342-2424483)
chr4 (42-194)||(18462929-18463079)
chr4 (42-144)||(14477588-14477687)
chr4 (1-144)||(26446163-26446304)
chr4 (42-144)||(13165089-13165188)
chr4 (61-109)||(45314096-45314144)
chr4 (128-194)||(16296777-16296844)
chr4 (22-89)||(26014295-26014360)
chr4 (33-122)||(9638987-9639075)
chr4 (95-138)||(20150787-20150830)
[»] chr3 (17 HSPs)
chr3 (1-194)||(53646007-53646205)
chr3 (62-194)||(54330321-54330453)
chr3 (94-194)||(14152446-14152546)
chr3 (95-194)||(5215552-5215651)
chr3 (42-153)||(21845648-21845756)
chr3 (1-137)||(15566706-15566848)
chr3 (42-144)||(48631288-48631387)
chr3 (126-194)||(15566418-15566486)
chr3 (3-58)||(24548911-24548966)
chr3 (33-98)||(50350803-50350866)
chr3 (42-153)||(3160623-3160731)
chr3 (8-55)||(24547243-24547290)
chr3 (22-78)||(11563747-11563801)
chr3 (1-32)||(6820237-6820268)
chr3 (151-194)||(45803440-45803483)
chr3 (33-61)||(14641535-14641563)
chr3 (33-61)||(49900767-49900795)
[»] scaffold0439 (1 HSPs)
scaffold0439 (1-194)||(4327-4518)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-194)||(9883-10074)
[»] chr5 (14 HSPs)
chr5 (1-194)||(8833161-8833352)
chr5 (9-194)||(14025770-14025953)
chr5 (1-194)||(26749938-26750128)
chr5 (33-194)||(8503875-8504034)
chr5 (45-194)||(26762308-26762455)
chr5 (9-147)||(1626881-1627017)
chr5 (1-56)||(660830-660885)
chr5 (42-144)||(21504096-21504195)
chr5 (1-61)||(21299992-21300059)
chr5 (1-36)||(20197613-20197648)
chr5 (95-138)||(24068191-24068234)
chr5 (33-62)||(19921680-19921709)
chr5 (33-61)||(21398631-21398659)
chr5 (42-105)||(21404080-21404141)
[»] scaffold0385 (1 HSPs)
scaffold0385 (3-194)||(251-440)
[»] chr8 (22 HSPs)
chr8 (1-194)||(17978371-17978562)
chr8 (1-194)||(22474662-22474853)
chr8 (33-194)||(12037151-12037310)
chr8 (33-194)||(21579193-21579352)
chr8 (33-194)||(29762855-29763014)
chr8 (45-194)||(41680132-41680279)
chr8 (33-194)||(22208174-22208334)
chr8 (18-173)||(36405104-36405257)
chr8 (33-194)||(22258293-22258453)
chr8 (1-144)||(4380572-4380713)
chr8 (1-58)||(36732367-36732424)
chr8 (1-61)||(5761570-5761630)
chr8 (42-138)||(20879435-20879528)
chr8 (1-61)||(21514728-21514788)
chr8 (1-61)||(22317866-22317926)
chr8 (22-61)||(20022016-20022055)
chr8 (42-92)||(20517032-20517080)
chr8 (95-138)||(22966772-22966815)
chr8 (1-61)||(22532087-22532147)
chr8 (1-61)||(22536772-22536832)
chr8 (100-138)||(21697512-21697550)
chr8 (1-61)||(42265464-42265524)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-194)||(33360-33551)
[»] scaffold0630 (1 HSPs)
scaffold0630 (1-194)||(8969-9159)
[»] chr7 (18 HSPs)
chr7 (1-194)||(14317978-14318168)
chr7 (33-194)||(14160843-14161002)
chr7 (62-194)||(9743093-9743225)
chr7 (45-194)||(15119306-15119453)
chr7 (33-194)||(43276731-43276890)
chr7 (100-191)||(8513806-8513898)
chr7 (1-144)||(4690618-4690759)
chr7 (1-144)||(43745612-43745753)
chr7 (42-122)||(42565829-42565907)
chr7 (1-58)||(48212682-48212739)
chr7 (42-156)||(33060383-33060494)
chr7 (1-85)||(8135193-8135275)
chr7 (100-147)||(8488147-8488194)
chr7 (15-61)||(15095606-15095652)
chr7 (1-61)||(24269901-24269962)
chr7 (33-61)||(58400-58428)
chr7 (33-61)||(12127150-12127178)
chr7 (33-61)||(19195648-19195676)
[»] scaffold0048 (1 HSPs)
scaffold0048 (1-194)||(56882-57070)
[»] scaffold0020 (1 HSPs)
scaffold0020 (45-194)||(174127-174274)
[»] scaffold0063 (1 HSPs)
scaffold0063 (42-194)||(62624-62774)
[»] chr2 (20 HSPs)
chr2 (47-194)||(23968624-23968769)
chr2 (33-194)||(14179715-14179874)
chr2 (33-194)||(14183453-14183612)
chr2 (50-194)||(24717925-24718067)
chr2 (42-127)||(19647206-19647289)
chr2 (42-156)||(20005967-20006078)
chr2 (1-78)||(19201155-19201230)
chr2 (42-144)||(28652548-28652648)
chr2 (42-122)||(45535903-45535981)
chr2 (1-59)||(149449-149514)
chr2 (7-72)||(18388151-18388214)
chr2 (7-61)||(23610663-23610717)
chr2 (1-61)||(22502008-22502075)
chr2 (1-61)||(22509942-22510009)
chr2 (128-194)||(149585-149652)
chr2 (1-109)||(12626374-12626488)
chr2 (65-144)||(25584280-25584358)
chr2 (151-194)||(12626535-12626578)
chr2 (33-61)||(17307523-17307551)
chr2 (33-61)||(21369330-21369358)
[»] scaffold0371 (2 HSPs)
scaffold0371 (45-194)||(10445-10592)
scaffold0371 (45-122)||(3853-3927)
[»] scaffold0108 (1 HSPs)
scaffold0108 (5-194)||(6322-6511)
[»] scaffold0431 (1 HSPs)
scaffold0431 (100-194)||(5536-5630)
[»] scaffold1437 (1 HSPs)
scaffold1437 (75-194)||(321-440)
[»] scaffold1160 (1 HSPs)
scaffold1160 (101-194)||(590-683)
[»] scaffold0261 (1 HSPs)
scaffold0261 (1-143)||(6375-6514)
[»] scaffold0121 (1 HSPs)
scaffold0121 (100-194)||(20105-20199)
[»] scaffold0092 (1 HSPs)
scaffold0092 (42-194)||(38438-38588)
[»] scaffold0021 (3 HSPs)
scaffold0021 (132-194)||(169346-169408)
scaffold0021 (40-127)||(17078-17163)
scaffold0021 (40-127)||(26609-26694)
[»] scaffold0217 (1 HSPs)
scaffold0217 (42-127)||(28686-28769)
[»] scaffold0165 (2 HSPs)
scaffold0165 (40-153)||(31877-31987)
scaffold0165 (46-110)||(32038-32100)
[»] scaffold0337 (1 HSPs)
scaffold0337 (42-153)||(3152-3260)
[»] scaffold0017 (2 HSPs)
scaffold0017 (42-153)||(23561-23669)
scaffold0017 (7-61)||(26764-26818)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-58)||(18315-18372)
[»] scaffold1256 (1 HSPs)
scaffold1256 (8-122)||(2162-2275)
[»] scaffold0516 (2 HSPs)
scaffold0516 (8-122)||(5267-5380)
scaffold0516 (8-61)||(5170-5223)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-61)||(328243-328303)
[»] scaffold1939 (1 HSPs)
scaffold1939 (44-189)||(38-181)
[»] scaffold0059 (1 HSPs)
scaffold0059 (1-144)||(49686-49827)
[»] scaffold0394 (1 HSPs)
scaffold0394 (42-153)||(7510-7618)
[»] scaffold0058 (1 HSPs)
scaffold0058 (42-153)||(59652-59760)
[»] scaffold0203 (1 HSPs)
scaffold0203 (1-144)||(17888-18036)
[»] scaffold1102 (1 HSPs)
scaffold1102 (42-126)||(1947-2029)
[»] scaffold0125 (1 HSPs)
scaffold0125 (35-122)||(28528-28614)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-61)||(158777-158837)
[»] scaffold1800 (1 HSPs)
scaffold1800 (42-156)||(552-663)
[»] scaffold0111 (1 HSPs)
scaffold0111 (1-61)||(12481-12548)
[»] scaffold0213 (1 HSPs)
scaffold0213 (33-150)||(19157-19272)
[»] scaffold0145 (1 HSPs)
scaffold0145 (95-138)||(8086-8129)
[»] scaffold0120 (1 HSPs)
scaffold0120 (95-138)||(29273-29316)
[»] scaffold0628 (1 HSPs)
scaffold0628 (22-61)||(1034-1073)
[»] scaffold0594 (1 HSPs)
scaffold0594 (151-194)||(2146-2189)
[»] scaffold0328 (1 HSPs)
scaffold0328 (1-61)||(18589-18655)
[»] scaffold0555 (1 HSPs)
scaffold0555 (22-58)||(8722-8758)


Alignment Details
Target: scaffold0401 (Bit Score: 155; Significance: 3e-82; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 8918 - 8727
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaaga 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||| |    
T  8918 agagtcagagaagagaaagcggtagaaccttgcgatcatctaacctaaggtaagggtggga--ctaaccttctttaatcataagtatgtaatcctgaaaa 8821  T
Q  101 agggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8820 agggtttaaccttgtagatgttaatcggttttgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 8727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 155; Significance: 3e-82; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 14792518 - 14792709
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaaga 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||| |    
T  14792518 agagtcagagaagagaaagcggtagaaccttgcgatcatctaacctaaggtaagggtggga--ctaaccttctttaatcataagtatgtaatcctgaaaa 14792615  T
Q  101 agggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  14792616 agggtttaaccttgtagttgttaataggtttcgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatctgatga 14792709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 7 - 194
Target Start/End: Complemental strand, 18121694 - 18121509
Alignment:
Q  7 agagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtt 106  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||   |||||||||||||||||||||||||||||||||| |||| ||    
T  18121694 agagaagagaaagcggtagaaccttgcgatcatctaacctaaggtaagggtgggat--taaccttctttaatcataagtatgtaatcctgaaaaaggatt 18121597  T
Q  107 taatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18121596 taaccttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtaaaaagagtagataatccgatga 18121509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 8 - 186
Target Start/End: Original strand, 38887049 - 38887225
Alignment:
Q  8 gagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggttt 107  Q
    |||||||||||||||||||| |||| |||||||||| ||||||||||||||  | |||||||||||||||||||||||||||||||||||| ||||||||    
T  38887049 gagaagagaaagcggtagaaacttgtgatcatctaacctaaggtaagggtg--aaactaaccttctttaatcataagtatgtaatcctgaaaaagggttt 38887146  T
Q  108 aatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataa 186  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  38887147 aatcttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaaagtgatcgtagaaagagtagataa 38887225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 44892546 - 44892355
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaaga 100  Q
    |||||| |||||||||||||||||||| ||||||||||||||| ||||| |||||||||||  |||||||||||||||||||||||||||||| |||| |    
T  44892546 agagtcggagaagagaaagcggtagaaccttgcgatcatctaacctaagttaagggtggga--ctaaccttctttaatcataagtatgtaatcttgaaaa 44892449  T
Q  101 agggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||| ||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  44892448 aggatttaaccttgtagttgttaataggttttgatattgtagaattagggtttgaaactaaaattgattgtagaaagagtagataatccgatga 44892355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 33 - 194
Target Start/End: Original strand, 41225441 - 41225600
Alignment:
Q  33 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggtttt 132  Q
    |||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||| |||||||||||    
T  41225441 cgatcatctaatttaaggtaagggtggga--ctaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgcagttgataataggtttt 41225538  T
Q  133 gatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||||||||||| ||| |||||||||||||||||||  |||||||||||||||||||||||||    
T  41225539 gatgttgtagagttagggtttgaaactaaaattgaatgtagaaagagtagataatccgatga 41225600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 33 - 194
Target Start/End: Original strand, 41226694 - 41226853
Alignment:
Q  33 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggtttt 132  Q
    |||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||| |||||||||||    
T  41226694 cgatcatctaatttaaggtaagggtggga--ctaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgcagttgataataggtttt 41226791  T
Q  133 gatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||||||||||| ||| |||||||||||||||||||  |||||||||||||||||||||||||    
T  41226792 gatgttgtagagttagggtttgaaactaaaattgaatgtagaaagagtagataatccgatga 41226853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 35 - 128
Target Start/End: Original strand, 21243746 - 21243838
Alignment:
Q  35 atcatctaatctaagg-taagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaatagg 128  Q
    |||||||||||||||| ||||||||  ||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||    
T  21243746 atcatctaatctaagggtaagggtg--agactaaccttctttaatcataaatatgtaatcctgaaaaagggtttaaccttgtagttgttaatagg 21243838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 24719466 - 24719615
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataag-tatgtaatcctgaag 99  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||   ||||| | |||| |||| ||  | | | |||| |||||     
T  24719466 agagtcagagaagagaaagcggtagaaccttgcgatcatctaacctatggtaagggtg---gactagctttctctaataatgggttgtataattctgaaa 24719562  T
Q  100 aagggtttaatcttgtagttgttaataggttttgatgttgtag-aattaaggtt 152  Q
    |||||||||| ||||||||||||| || ||||||||||| ||| ||||||||||    
T  24719563 aagggtttaaccttgtagttgttatta-gttttgatgttatagaaattaaggtt 24719615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 146
Target Start/End: Complemental strand, 39061375 - 39061275
Alignment:
Q  43 atctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtag 142  Q
    |||||||||||| ||||||  |||||||||| ||||||| ||||| |||| ||||| || ||||||| |||||||||||| ||| ||||||||||| |||    
T  39061375 atctaaggtaagagtggga--ctaaccttctgtaatcatgagtatataattctgaaaaaaggtttaaccttgtagttgttgata-gttttgatgttatag 39061279  T
Q  143 aatt 146  Q
    ||||    
T  39061278 aatt 39061275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 153
Target Start/End: Original strand, 21188030 - 21188138
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 141  Q
    ||||||||||||||||||||  |||||||| ||||||||| ||||| ||||  |||  |||| |||||| ||||||||||| ||| ||||||||||| ||    
T  21188030 aatctaaggtaagggtggga--ctaaccttttttaatcatgagtatataattttgagaaaggatttaattttgtagttgttgata-gttttgatgttata 21188126  T
Q  142 gaattaaggttt 153  Q
    ||| | ||||||    
T  21188127 gaagttaggttt 21188138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 21243841 - 21243883
Alignment:
Q  152 ttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  21243841 ttgaaactaaaattgattgtagaaagagtagataatccgatga 21243883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 24723312 - 24723366
Alignment:
Q  7 agagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtggga 61  Q
    ||||||||||||||||||||| ||||||||||   ||||||||||||||||||||    
T  24723312 agagaagagaaagcggtagaaccttgcgatcaatcaatctaaggtaagggtggga 24723366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 158
Target Start/End: Original strand, 11808187 - 11808288
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 141  Q
    |||| ||||||||||||  |||||||||||||||||||||||||||||||             ||||| ||||||||||||||||||||||||||||  |    
T  11808187 aatccaaggtaagggtg--agactaaccttctttaatcataagtatgtaa-------------tttaaccttgtagttgttaataggttttgatgtttca 11808271  T
Q  142 gaattaaggtttgaaac 158  Q
    |||||| | ||||||||    
T  11808272 gaattaggatttgaaac 11808288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16058262 - 16058329
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttg-------cgatcatctaatctaaggtaagggtggga 61  Q
    ||||||||||||||||||| ||||||||||||       |||||||||||||||||||||||||||||    
T  16058262 agagtcagagaagagaaagtggtagaatcttgtagagtccgatcatctaatctaaggtaagggtggga 16058329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 51324596 - 51324544
Alignment:
Q  6 cagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtg 58  Q
    |||||||||||||||||||||| ||||||||||   |||||||||||||||||    
T  51324596 cagagaagagaaagcggtagaaccttgcgatcaatcaatctaaggtaagggtg 51324544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 194
Target Start/End: Complemental strand, 8306577 - 8306510
Alignment:
Q  128 gttttgatgttgtagaa-ttaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||||||||||| ||||| ||| ||||||||| |||||||||| || |||||||||| |||||||||||    
T  8306577 gttttgatgttatagaaattagggtttgaaattaaaattgattgttgaaagagtaggtaatccgatga 8306510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 194
Target Start/End: Original strand, 17901905 - 17901948
Alignment:
Q  151 tttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  17901905 tttgaaactaaaattgattgttgaaagagtagataatccgatga 17901948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 138
Target Start/End: Complemental strand, 40390155 - 40390112
Alignment:
Q  95 tgaagaagggtttaatcttgtagttgttaataggttttgatgtt 138  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  40390155 tgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 40390112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 195
Target Start/End: Complemental strand, 6834118 - 6834074
Alignment:
Q  151 tttgaaactaaaattgatcgtagaaagagtagataatccgatgat 195  Q
    |||||||||||||||||| || |||||||||| ||||||||||||    
T  6834118 tttgaaactaaaattgattgttgaaagagtaggtaatccgatgat 6834074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 194
Target Start/End: Original strand, 21239146 - 21239189
Alignment:
Q  151 tttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    |||||||||||||||||| || |||||||||| |||||||||||    
T  21239146 tttgaaactaaaattgattgttgaaagagtaggtaatccgatga 21239189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 12710877 - 12710814
Alignment:
Q  89 taatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtag-aattaaggtt 152  Q
    |||| ||||| |||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  12710877 taattctgaaaaagggtttaatcttgtagttgttgtta-gttttgatgttatagaaattaaggtt 12710814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 147; Significance: 2e-77; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 7217199 - 7217389
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaaga 100  Q
    ||||||||| ||||||||||||||||| ||||||||||||||  ||||||||||||||  |||||||||||||||||||||||||||||||||||||| |    
T  7217199 agagtcagaaaagagaaagcggtagaaccttgcgatcatctagcctaaggtaagggtg--agactaaccttctttaatcataagtatgtaatcctgaaaa 7217296  T
Q  101 agggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7217297 agggtttaaccttgtagttgttaatagg-tttgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 7217389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 22557344 - 22557154
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaaga 100  Q
    |||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||||||||||||||||| |    
T  22557344 agagtcagagaagagaaagcagtagaaccttgcgatcatctaacctaaggtaagggtgggag--taaccttcttta-tcataagtatgtaatcctgaaaa 22557248  T
Q  101 agggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  22557247 agggtttaaccttgtagttgttaataggttttgatgttgtagaattcgggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 22557154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 23431395 - 23431593
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttg-------cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatc 93  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||    
T  23431395 agagtcagagaagagaaagcggtagaatcttgtagagtccgatcatctaatctaaggtaagcgtggga--ctaaccttctttaatcataagtatgtaatc 23431492  T
Q  94 ctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatg 193  Q
    ||||| |||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  23431493 ctgaaaaagggtttaaccttgtagttgctaataggttttgatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtagataatccgatg 23431592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 18455028 - 18455219
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaaga 100  Q
    ||||| ||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||| |    
T  18455028 agagttagagaagagaaagcggtagaaccttgtgatcatctaacctaaggtaagggtgggag--taaccttctttaatcataagtatgtaatcctgaaaa 18455125  T
Q  101 agggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||| ||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
T  18455126 aggttttaaccttgtagttgttaataggttttgatattgtagaattagggtttgaaactagaattgatagtagaaagagtagataatccgatga 18455219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 33 - 194
Target Start/End: Complemental strand, 25922066 - 25921907
Alignment:
Q  33 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggtttt 132  Q
    |||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||    
T  25922066 cgatcatctaatctaaggtaagggtggga--ctaaccttatttaatcataagtatgtaatcctaaaaaagggtttaaccttgtagttgttaataggtttt 25921969  T
Q  133 gatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||    
T  25921968 gatgttgtagaattaaggtttgaaactaaaattgattgtagaaagagtaaataatctgatga 25921907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 45 - 194
Target Start/End: Complemental strand, 31734760 - 31734613
Alignment:
Q  45 ctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa 144  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||| ||||| |||||||||| |||| |||||||||||||||||||||||||| ||    
T  31734760 ctaaggtaagggtggga--ctaaccttctttaatcataagtatgtaattctgaaaaagggtttaaccttgcagttgttaataggttttgatgttgtaaaa 31734663  T
Q  145 ttaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31734662 ttagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 31734613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 32259941 - 32259751
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaaga 100  Q
    ||||| |||| ||||||||||||||| || | ||   ||| ||||| ||||||||||| ||  ||||||||||||||||||||||||||||||||||| |    
T  32259941 agagttagaggagagaaagcggtagagtccttcgtcgatc-aatcttaggtaagggtgtga--ctaaccttctttaatcataagtatgtaatcctgaaaa 32259845  T
Q  101 agggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    || |||||| ||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32259844 agagtttaaccttgtagtttttaataagttttgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 32259751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 89 - 194
Target Start/End: Complemental strand, 23658099 - 23657994
Alignment:
Q  89 taatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatc 188  Q
    |||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||    
T  23658099 taattctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaataagggtttgaaactaaaattgattgtagaaagagtagataatc 23658000  T
Q  189 cgatga 194  Q
    ||||||    
T  23657999 cgatga 23657994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 144
Target Start/End: Complemental strand, 1819008 - 1818909
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 141  Q
    |||||||||||||||||  ||||||||||||||||||||| ||||| || | ||||| |||||||||| |||||||||||||||| ||||||||||| ||    
T  1819008 aatctaaggtaagggtg--agactaaccttctttaatcatgagtatatagttctgaaaaagggtttaagcttgtagttgttaata-gttttgatgttata 1818912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21683030 - 21683090
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtggga 61  Q
    |||||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||    
T  21683030 agagtcagagaagagaaagctgtaggaccttgcgatcatctaacctaaggtaagggtggga 21683090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 123
Target Start/End: Original strand, 25601326 - 25601406
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatc-ttgtagttgtta 123  Q
    ||||||||||||||| |  |||||||||||| ||||||||||| ||||||| ||||| |||||||||| | ||||||||||||    
T  25601326 aatctaaggtaagggag--agactaaccttcattaatcataagaatgtaattctgaaaaagggtttaacctttgtagttgtta 25601406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 31166302 - 31166230
Alignment:
Q  36 tcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaat 110  Q
    ||||| |||||||||||||||||  ||||||||| ||||||||||| ||| | |||| ||||| |||||||||||    
T  31166302 tcatccaatctaaggtaagggtg--agactaaccatctttaatcatgagtctataattctgaaaaagggtttaat 31166230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 153
Target Start/End: Complemental strand, 18459362 - 18459253
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctg-aagaagggtttaatcttgtagttgttaataggttttgatgttgt 140  Q
    ||||||||||||||||||  ||||||||| |||||||||| ||||| | || ||| || ||||||||||| || ||||| |||| | ||||||||||| |    
T  18459362 aatctaaggtaagggtgg--gactaacctactttaatcatgagtatatgattctgaaaaaagggtttaattttatagtttttaaca-gttttgatgttat 18459266  T
Q  141 agaattaaggttt 153  Q
    |||| | ||||||    
T  18459265 agaagttaggttt 18459253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 194
Target Start/End: Complemental strand, 29045213 - 29045170
Alignment:
Q  151 tttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    |||||||||||||||||| || |||||||||| |||||||||||    
T  29045213 tttgaaactaaaattgattgttgaaagagtaggtaatccgatga 29045170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 28948672 - 28948597
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaat 78  Q
    |||| ||||||| |||||||| ||||| ||||||||||   ||||||||||||||||  ||||||||| |||| ||||    
T  28948672 agagccagagaaaagaaagcgatagaaccttgcgatcaatcaatctaaggtaagggt--gagactaactttctctaat 28948597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 13285809 - 13285767
Alignment:
Q  37 catctaatctaaggtaagggtgggagactaaccttctttaatcat 81  Q
    |||||||||||||||||||||||  |||||||||||| |||||||    
T  13285809 catctaatctaaggtaagggtgg--gactaaccttctataatcat 13285767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 18982439 - 18982371
Alignment:
Q  75 taatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa 144  Q
    ||||||||||||| |  | ||||| ||||||||||| ||||||||||| ||| ||||||||| |||||||    
T  18982439 taatcataagtatatggttctgaaaaagggtttaattttgtagttgttgata-gttttgatgctgtagaa 18982371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 153
Target Start/End: Original strand, 24506157 - 24506220
Alignment:
Q  89 taatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggttt 153  Q
    |||| ||||| ||||||||||| ||||||||||| ||| ||||||||||| ||||| | ||||||    
T  24506157 taattctgaaaaagggtttaattttgtagttgttgata-gttttgatgttatagaagttaggttt 24506220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 147; Significance: 2e-77; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 19565873 - 19566064
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaaga 100  Q
    ||||| ||||||||||||||||||||| ||||||||||   |||||||||||||||||| |  ||||||||||||||||||||||||||||||||||| |    
T  19565873 agagtaagagaagagaaagcggtagaaccttgcgatcaatcaatctaaggtaagggtggta--ctaaccttctttaatcataagtatgtaatcctgaaaa 19565970  T
Q  101 agggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19565971 agggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 19566064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 46741296 - 46741105
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaaga 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||  |||||||||||||||||||| |||||||||||||| |    
T  46741296 agagtcagagaagagaaagcggtagaaccttgcgatcatctaacctaaggtaagtgtggga--ctaaccttctttaatcataaatatgtaatcctgaaaa 46741199  T
Q  101 agggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||    
T  46741198 agggtttaaccttgtagttgttaattggttttgatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtggataatccgatga 46741105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 7 - 194
Target Start/End: Complemental strand, 12623407 - 12623222
Alignment:
Q  7 agagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtt 106  Q
    ||||||||||||||||||||| ||||||||||   ||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||| |||||||    
T  12623407 agagaagagaaagcggtagaaccttgcgatcaatcaatctaaggtaagggtggga--ctaaccttctttaatcataggtatgtaatcctgaaaaagggtt 12623310  T
Q  107 taatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||    
T  12623309 taaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtagataatgcgatga 12623222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 33243242 - 33243440
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttg-------cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatc 93  Q
    |||||| |||||||||||||| ||||||||||       | ||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  33243242 agagtcggagaagagaaagcgttagaatcttgtagagtcccatcatctaatctaaggtaagggtg--agactaacattctttaatcataagtatgtaatc 33243339  T
Q  94 ctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatg 193  Q
     ||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  33243340 ttgaaatagggtttaatcttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtagataatccgatg 33243439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 35 - 194
Target Start/End: Complemental strand, 40230369 - 40230212
Alignment:
Q  35 atcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttga 134  Q
    |||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||| |||| ||||||||||  |||||||||||||||||||||||    
T  40230369 atcatctaatctaaggtaagggtggga--ctaactttctttaatcataagtatgtaatcttgaaaaagggtttaacattgtagttgttaataggttttga 40230272  T
Q  135 tgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  40230271 tgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 40230212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 42 - 194
Target Start/End: Original strand, 44023599 - 44023749
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 141  Q
    ||||||||||||||||| ||  |||||||||||||||||||||||||||||| |||| |||||||||| |||||| |||||| |||||||||||||||||    
T  44023599 aatctaaggtaagggtgcga--ctaaccttctttaatcataagtatgtaatcttgaaaaagggtttaaccttgtacttgttagtaggttttgatgttgta 44023696  T
Q  142 gaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  44023697 gaattagggtttgaaactaaaattgatcgtagaaagagtagataatctgatga 44023749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 89 - 194
Target Start/End: Complemental strand, 33186913 - 33186808
Alignment:
Q  89 taatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatc 188  Q
    |||| ||||| |||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  33186913 taattctgaaaaagggtttaaccttgtggttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtagataatc 33186814  T
Q  189 cgatga 194  Q
    ||||||    
T  33186813 cgatga 33186808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 100 - 194
Target Start/End: Original strand, 12424345 - 12424439
Alignment:
Q  100 aagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  12424345 aagggtttaactttgtagttgttaataggttttgatgttgtagaattagggtttggaactaaaattgatcgtagaaagagtagataatccgatga 12424439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 26921464 - 26921570
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaaga 100  Q
    |||||||||||||||||||||||| || |||| |||||||||| ||||||||||||| |  ||||||||||| ||||||||||||||||||| ||||| |    
T  26921464 agagtcagagaagagaaagcggtataaccttgtgatcatctaacctaaggtaagggtag--gactaaccttcattaatcataagtatgtaattctgaaaa 26921561  T
Q  101 agggtttaa 109  Q
    |||||||||    
T  26921562 agggtttaa 26921570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 2424342 - 2424483
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataag-tatgtaatcctgaag 99  Q
    ||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||  ||||||||| |||| ||||  |||| | | ||||  ||||     
T  2424342 agagtcagagaagagaaagcgttagaaccttgcgatcatctaacctaaggtaagggt--gagactaactttctctaattctaagttgtataattttgaaa 2424439  T
Q  100 aagggtttaatcttgtagttgttaataggttttgatgttgtagaa 144  Q
    |||||||||||||||||||||||| || ||||||||||| |||||    
T  2424440 aagggtttaatcttgtagttgttatta-gttttgatgttatagaa 2424483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 194
Target Start/End: Complemental strand, 18463079 - 18462929
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 141  Q
    |||||||||||| |||||||  |||||||||||||||||| ||||| |||| ||||| ||||||||||| ||||||||||||||| ||||||||||| ||    
T  18463079 aatctaaggtaaaggtggga--ctaaccttctttaatcatgagtatataattctgaaaaagggtttaattttgtagttgttaata-gttttgatgttata 18462983  T
Q  142 gaattaaggtttgaaacta-aaattgatcgtagaaagagtagataatccgatga 194  Q
     || | |||||| ||| || || ||||| || ||||| |||| |||||| ||||    
T  18462982 aaagttaggttttaaattacaatttgattgttgaaagtgtaggtaatccaatga 18462929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 144
Target Start/End: Complemental strand, 14477687 - 14477588
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 141  Q
    |||||||||||||||||| |  |||||||||||||||||| ||||| |||| ||||| |||||||| |||||||||| ||| ||| ||||||||||| ||    
T  14477687 aatctaaggtaagggtggca--ctaaccttctttaatcatgagtatataattctgaaaaagggtttgatcttgtagtcgttgata-gttttgatgttata 14477591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 26446304 - 26446163
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataag-tatgtaatcctgaag 99  Q
    |||||||||||||||| |||||||||| ||||||||||||||| |||| |||||||| |  ||||| | |||| |||| ||  | | | |||| |||||     
T  26446304 agagtcagagaagagagagcggtagaaccttgcgatcatctaacctaaagtaagggtag--gactagctttctctaataatgggttgtataattctgaaa 26446207  T
Q  100 aagggtttaatcttgtagttgttaataggttttgatgttgtagaa 144  Q
    || ||||||||||||||||||||  || ||||||||||| |||||    
T  26446206 aatggtttaatcttgtagttgttgtta-gttttgatgttatagaa 26446163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 144
Target Start/End: Complemental strand, 13165188 - 13165089
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 141  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||   ||  |||| ||||| ||||| || |||||||||||| ||||||||||| ||    
T  13165188 aatctaaggtaagggtggga--ctaaccttctttaatcatgagtataggattgtgaaaaaggggttaattttatagttgttaata-gttttgatgttata 13165092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 45314096 - 45314144
Alignment:
Q  61 agactaaccttctttaatcataagtatgtaatcctgaagaagggtttaa 109  Q
    |||||||||||| ||||||||||||||||||| ||||| ||||||||||    
T  45314096 agactaaccttcattaatcataagtatgtaattctgaaaaagggtttaa 45314144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 194
Target Start/End: Complemental strand, 16296844 - 16296777
Alignment:
Q  128 gttttgatgttgtagaa-ttaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||||||||||| ||||| ||| ||||||||| |||||||||| || |||||||||| |||||||||||    
T  16296844 gttttgatgttatagaaattagggtttgaaattaaaattgattgttgaaagagtaggtaatccgatga 16296777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 26014360 - 26014295
Alignment:
Q  22 gtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgt 89  Q
    |||||| ||| |||||||||||||||||||||||||||  |||||||||||  ||||| | |||||||    
T  26014360 gtagaaccttccgatcatctaatctaaggtaagggtgg--gactaaccttcaataatcttgagtatgt 26014295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 9639075 - 9638987
Alignment:
Q  33 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagta-tgtaatcctgaagaagggtttaatcttgtagttgtt 122  Q
    |||| ||||||||||||||||||||||||  ||| | |||| |||| || |||  |||||| ||||| |||||||||| ||||||||||||    
T  9639075 cgataatctaatctaaggtaagggtggga--ctagctttctctaataatgagttgtgtaattctgaaaaagggtttaaccttgtagttgtt 9638987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 138
Target Start/End: Complemental strand, 20150830 - 20150787
Alignment:
Q  95 tgaagaagggtttaatcttgtagttgttaataggttttgatgtt 138  Q
    |||| |||| ||||| ||||||||||||||||||||||||||||    
T  20150830 tgaaaaaggatttaaccttgtagttgttaataggttttgatgtt 20150787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 144; Significance: 9e-76; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 53646007 - 53646205
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgc-------gatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatc 93  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  53646007 agagtcagagaagagaaagcggtagaatcttgtagagtctgatcatctaatctaaggtaagggtggga--ctaaccttctttaatcataaatatgtaatc 53646104  T
Q  94 ctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatg 193  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  53646105 ctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatg 53646204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 62 - 194
Target Start/End: Original strand, 54330321 - 54330453
Alignment:
Q  62 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 161  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  54330321 gactaactttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa 54330420  T
Q  162 aattgatcgtagaaagagtagataatccgatga 194  Q
    |||||||||||||||||||||||||||||||||    
T  54330421 aattgatcgtagaaagagtagataatccgatga 54330453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 94 - 194
Target Start/End: Original strand, 14152446 - 14152546
Alignment:
Q  94 ctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatg 193  Q
    ||||| |||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||    
T  14152446 ctgaaaaagggtttaaccttgtagttgttagtaggttttgatgttgtagaattagggtttgaaactaaaattgattgtataaagagtagataatccgatg 14152545  T
Q  194 a 194  Q
    |    
T  14152546 a 14152546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 95 - 194
Target Start/End: Complemental strand, 5215651 - 5215552
Alignment:
Q  95 tgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    |||| |||||||||| ||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||    
T  5215651 tgaaaaagggtttaaccttgtagttattaataggttttgatgttgtagaattagggtttaaaactaaaattgattgtagatagagtagataatccgatga 5215552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 153
Target Start/End: Original strand, 21845648 - 21845756
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 141  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| || | ||||| |||||||||| |||||||||||||||| ||||||||||| ||    
T  21845648 aatctaaggtaagggtggga--ctaaccttctttaatcataagtatatagttctgaaaaagggtttaagcttgtagttgttaata-gttttgatgttata 21845744  T
Q  142 gaattaaggttt 153  Q
    ||| | ||||||    
T  21845745 gaaattaggttt 21845756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 15566848 - 15566706
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttg-------cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagta-tgtaat 92  Q
    ||||||||||||||||||||||||||||||||       ||||||| |||||||| ||||||||||||  ||||| |||| ||||  |||||  | ||||    
T  15566848 agagtcagagaagagaaagcggtagaatcttgttgagtccgatcatgtaatctaaagtaagggtggga--ctaactttctctaattctaagttgtataat 15566751  T
Q  93 cctgaagaagggtttaatcttgtagttgttaataggttttgatgt 137  Q
     ||||| |||||||||| |||||||||||||||||||||||||||    
T  15566750 tctgaaaaagggtttaaccttgtagttgttaataggttttgatgt 15566706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 144
Target Start/End: Complemental strand, 48631387 - 48631288
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 141  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||| || | ||||| |||||||||| |||||||||||||||| ||||||||||| ||    
T  48631387 aatctaaggtaagggtggga--ctaaccttctttaatcataaatatatagttctgaaaaagggtttaagcttgtagttgttaata-gttttgatgttata 48631291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 15566486 - 15566418
Alignment:
Q  126 aggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    |||||||||||| ||| ||||| ||||| |||||||||||||||||||||| ||||||||||| |||||    
T  15566486 aggttttgatgtggtaaaattagggtttaaaactaaaattgatcgtagaaatagtagataatctgatga 15566418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 24548911 - 24548966
Alignment:
Q  3 agtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtg 58  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||    
T  24548911 agtcagagaagagaaagcggtagaaccttgcgatcatctaacctaaagtaagggtg 24548966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 50350803 - 50350866
Alignment:
Q  33 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaa 98  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||| ||||| |||| |||||    
T  50350803 cgatcatctaatctaaggtaagggtgg--gactaaccttctttaatcatgagtatataattctgaa 50350866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 153
Target Start/End: Original strand, 3160623 - 3160731
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 141  Q
    |||||||||||||||||  ||||||||||||||||||||| ||||| |||| || || | ||||||||  ||||||||||| ||| |||||||| || ||    
T  3160623 aatctaaggtaagggtg--agactaaccttctttaatcatgagtatataattctaaaaatgggtttaactttgtagttgttgata-gttttgatattata 3160719  T
Q  142 gaattaaggttt 153  Q
    ||| | ||||||    
T  3160720 gaaattaggttt 3160731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 24547290 - 24547243
Alignment:
Q  8 gagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagg 55  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||    
T  24547290 gagaagagaaagcggtagaaccttgcgatcatctaacctaaggtaagg 24547243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 11563801 - 11563747
Alignment:
Q  22 gtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaat 78  Q
    |||||| ||| |||||||||||||||||||||||||||  |||||||||||| ||||    
T  11563801 gtagaaccttccgatcatctaatctaaggtaagggtgg--gactaaccttctctaat 11563747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 6820268 - 6820237
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  6820268 agagtcagagaagagaaagcggtagaatcttg 6820237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 194
Target Start/End: Original strand, 45803440 - 45803483
Alignment:
Q  151 tttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    |||||||||||||||||| || |||||||||| |||||||||||    
T  45803440 tttgaaactaaaattgattgttgaaagagtaggtaatccgatga 45803483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 61
Target Start/End: Original strand, 14641535 - 14641563
Alignment:
Q  33 cgatcatctaatctaaggtaagggtggga 61  Q
    |||||||||||||||||||||||||||||    
T  14641535 cgatcatctaatctaaggtaagggtggga 14641563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 61
Target Start/End: Complemental strand, 49900795 - 49900767
Alignment:
Q  33 cgatcatctaatctaaggtaagggtggga 61  Q
    |||||||||||||||||||||||||||||    
T  49900795 cgatcatctaatctaaggtaagggtggga 49900767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 143; Significance: 4e-75; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 4518 - 4327
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaaga 100  Q
    ||||||| |||||||||||||||| || ||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||| |||||| ||| |    
T  4518 agagtcacagaagagaaagcggtacaaccttgcgatcatctaacctaaggtaagggtggga--ctaaccttctttaatcataagtatataatcccgaaaa 4421  T
Q  101 agggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    | ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  4420 aaggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 4327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 143; Significance: 4e-75; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 9883 - 10074
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaaga 100  Q
    |||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||| ||||| |    
T  9883 agagtcggagaagagaaagcggtagaaccttgcgatcatctaacctaaggtaagggtggga--ctaaccttctttaatcataagtatgtaattctgaaaa 9980  T
Q  101 agggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||||||||  |||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  9981 agggtttagccttgtagtttctaataggttttgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 10074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 143; Significance: 4e-75; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 8833161 - 8833352
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaaga 100  Q
    |||||||||||||||||||| |||||| ||||||||||||||| ||| |||||||||||||  || |||||||||||||||||||||||||||||||| |    
T  8833161 agagtcagagaagagaaagctgtagaaccttgcgatcatctaacctagggtaagggtggga--ctgaccttctttaatcataagtatgtaatcctgaaaa 8833258  T
Q  101 agggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  8833259 agggtttaaccttatagttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatctgatga 8833352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 9 - 194
Target Start/End: Original strand, 14025770 - 14025953
Alignment:
Q  9 agaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggttta 108  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||    
T  14025770 agaaaagaaagcggtagaaccttgcgatcatctaatctaaggtaagggtggga--ctaaccttctttaatcataagtatgtaatcctgaaaaagggttta 14025867  T
Q  109 atcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    | ||||||||||||||||| ||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  14025868 accttgtagttgttaatagattttgatgttgtataattagggtttgaaactacaattgatcgtagaaagagtagataatccgatga 14025953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 26750128 - 26749938
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaaga 100  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||||| ||||||||||||||| |||||||||| |    
T  26750128 agagttagagaagagaaagcggtagaaccttgcgatcatctaacctaaggtaagggtg--agactaaccttttttaatcataagtatataatcctgaaaa 26750031  T
Q  101 agggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
     |||||||| |||||||||||||||| ||||||||||||||||||| ||| || ||||||||||||||| ||||||||||||||||||||||||    
T  26750030 ggggtttaaccttgtagttgttaataagttttgatgttgtagaatt-agggttaaaactaaaattgatcatagaaagagtagataatccgatga 26749938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 33 - 194
Target Start/End: Original strand, 8503875 - 8504034
Alignment:
Q  33 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggtttt 132  Q
    |||| ||||||| ||||||||||||||||  ||||||||||| ||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  8503875 cgattatctaatataaggtaagggtggga--ctaaccttcttcaatcataagtatgtaatcctgaacaagagtttaaccttgtagttgttaataggtttt 8503972  T
Q  133 gatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8503973 gatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 8504034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 45 - 194
Target Start/End: Complemental strand, 26762455 - 26762308
Alignment:
Q  45 ctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa 144  Q
    |||||||||||||||||  |||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  26762455 ctaaggtaagggtggga--ctaaccttctttaatcataattatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaa 26762358  T
Q  145 ttaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||| ||||||||||||||||||||||||||||||||| ||||| ||||||    
T  26762357 ttagggtttgaaactaaaattgatcgtagaaagagtaaataattcgatga 26762308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 1626881 - 1627017
Alignment:
Q  9 agaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggttta 108  Q
    ||||||||||||||||||| |||||||| |||||| |||||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||||||    
T  1626881 agaagagaaagcggtagaaccttgcgattatctaacctaaggtaagggtgtga--ctaaccttctttaatcataagtatgtaatcctgaaaaagggttta 1626978  T
Q  109 atcttgtagttgttaataggttttgatgttgtagaatta 147  Q
    | ||||||||||||||||||||||||||||||| |||||    
T  1626979 accttgtagttgttaataggttttgatgttgtaaaatta 1627017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 660885 - 660830
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaaggg 56  Q
    |||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  660885 agagtcggagaagagaaagcggtagaaccttgcgatcatctaacctaaggtaaggg 660830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 144
Target Start/End: Complemental strand, 21504195 - 21504096
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 141  Q
    |||||||||||| |||||||  |||||||||||||||||||||||| |  | ||||| ||||||||||  |||||||||||| || ||||||||||| ||    
T  21504195 aatctaaggtaaaggtggga--ctaaccttctttaatcataagtatatggttctgaaaaagggtttaagtttgtagttgttagta-gttttgatgttata 21504099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21299992 - 21300059
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttg-------cgatcatctaatctaaggtaagggtggga 61  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||    
T  21299992 agagtcagagaagagaaagcggtagaatcttgtagagtctgatcatctaatctaaggtaagggtggga 21300059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 20197613 - 20197648
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgat 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  20197613 agagtcagagaagagaaagcggtagaatcttgcgat 20197648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 138
Target Start/End: Complemental strand, 24068234 - 24068191
Alignment:
Q  95 tgaagaagggtttaatcttgtagttgttaataggttttgatgtt 138  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  24068234 tgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 24068191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 19921709 - 19921680
Alignment:
Q  33 cgatcatctaatctaaggtaagggtgggag 62  Q
    ||||||||||||||||||||||||||||||    
T  19921709 cgatcatctaatctaaggtaagggtgggag 19921680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 61
Target Start/End: Original strand, 21398631 - 21398659
Alignment:
Q  33 cgatcatctaatctaaggtaagggtggga 61  Q
    |||||||||||||||||||||||||||||    
T  21398631 cgatcatctaatctaaggtaagggtggga 21398659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 105
Target Start/End: Complemental strand, 21404141 - 21404080
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggt 105  Q
    |||||||||||||| |||||  |||||||||||||||||| ||| | |||| ||||| ||||||    
T  21404141 aatctaaggtaaggatggga--ctaaccttctttaatcatgagtctataattctgaaaaagggt 21404080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 141; Significance: 6e-74; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 3 - 194
Target Start/End: Complemental strand, 440 - 251
Alignment:
Q  3 agtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaag 102  Q
    ||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||  ||| ||| |||||||||||||||||||||||||||||| |||    
T  440 agtcagaaaagagaaagcggtagaaccttgcgatcatctaacctaaggtaagggtg--agattaatcttctttaatcataagtatgtaatcctgaaaaag 343  T
Q  103 ggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||    
T  342 ggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaaatttatagtagaaagagtagataatccgatga 251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 139; Significance: 9e-73; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 17978371 - 17978562
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaaga 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||  |||| ||||| |||||||||||||||||||||||| |    
T  17978371 agagtcagagaagagaaagcggtagaaccttgcgatcatctaaactaaggtaagggtggga--ctaaacttctataatcataagtatgtaatcctgaaaa 17978468  T
Q  101 agggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||| ||||||||||||||    
T  17978469 aggatttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgattatagaaagagcagataatccgatga 17978562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 22474853 - 22474662
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaaga 100  Q
    ||||||| ||||||||||||||||||| ||||||||||   ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |    
T  22474853 agagtcaaagaagagaaagcggtagaaccttgcgatcaatcaatctaaggtaagggtggga--ctaaccttctttaatcataagtatgtaatcctgaaaa 22474756  T
Q  101 agggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||| |||||    
T  22474755 agggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgattgtcgaaagagtagataatctgatga 22474662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 33 - 194
Target Start/End: Original strand, 12037151 - 12037310
Alignment:
Q  33 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggtttt 132  Q
    |||||||||||| ||||||||||||||||  |||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||    
T  12037151 cgatcatctaatataaggtaagggtggga--ctaaccttgtttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaatagctttt 12037248  T
Q  133 gatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||    
T  12037249 gatgttgtagaatcagggtttgaaactaaaattgattgtagaaagagtagataatccgatga 12037310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 33 - 194
Target Start/End: Original strand, 21579193 - 21579352
Alignment:
Q  33 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggtttt 132  Q
    |||||||||||| ||||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||    
T  21579193 cgatcatctaatttaaggtaagggtgtga--ctaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaatatgtttt 21579290  T
Q  133 gatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||    
T  21579291 gatgttgtagaattagggttcgaaactaaaattgattgtagaaagagtagataatccgatga 21579352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 33 - 194
Target Start/End: Original strand, 29762855 - 29763014
Alignment:
Q  33 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggtttt 132  Q
    |||||||||||| |||||||||||||  | |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||    
T  29762855 cgatcatctaatttaaggtaagggtg--aaactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataagtttt 29762952  T
Q  133 gatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    |||||||||||||||  ||||||||||||||||||| |||||||||||||||||| ||||||    
T  29762953 gatgttgtagaattagagtttgaaactaaaattgattgtagaaagagtagataatgcgatga 29763014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 45 - 194
Target Start/End: Original strand, 41680132 - 41680279
Alignment:
Q  45 ctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa 144  Q
    ||||||||| |||||||  ||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||    
T  41680132 ctaaggtaaaggtggga--ctaaccttctttaatcataagtatgtaatcctgataaagggtttaaccttgtagttgttaataggttttgatgttgtagaa 41680229  T
Q  145 ttaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||| |||||||||||||||||||  |||||| ||||||||||||||||||    
T  41680230 ttagggtttgaaactaaaattgactgtagaaggagtagataatccgatga 41680279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 33 - 194
Target Start/End: Complemental strand, 22208334 - 22208174
Alignment:
Q  33 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagta-tgtaatcctgaagaagggtttaatcttgtagttgttaataggttt 131  Q
    |||||||||||||||||||||||||||||  ||| | |||| |||| ||  ||  | |||| ||||| |||||||||| |||||||||||||||||||||    
T  22208334 cgatcatctaatctaaggtaagggtggga--ctagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttaataggttt 22208237  T
Q  132 tgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22208236 tgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 22208174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 18 - 173
Target Start/End: Original strand, 36405104 - 36405257
Alignment:
Q  18 agcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaat-cctgaagaagggtttaatcttgta 116  Q
    |||| ||||| ||||||||||   ||||||||||||||||| ||  ||||| ||||||||||||||||||||||| |||||| |||||||||| ||||||    
T  36405104 agcgatagaaccttgcgatcaatcaatctaaggtaagggtgtga--ctaactttctttaatcataagtatgtaatccctgaa-aagggtttaaccttgta 36405200  T
Q  117 gttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtag 173  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  36405201 gttgttaataggttttgatgtcgtagaattatggtttgaaactaaaattgattgtag 36405257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 194
Target Start/End: Original strand, 22258293 - 22258453
Alignment:
Q  33 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagta-tgtaatcctgaagaagggtttaatcttgtagttgttaataggttt 131  Q
    |||||||||||| |||||||||||||  |||||| | |||| |||| || |||  | |||| |  || |||||||||| |||| ||||||| ||||||||    
T  22258293 cgatcatctaatttaaggtaagggtg--agactagctttctctaataatgagttgtataattccaaaaaagggtttaaccttgcagttgttgataggttt 22258390  T
Q  132 tgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    |||||||||||||||| | ||||||||||||| |||| |||||||||||||||||||||||||    
T  22258391 tgatgttgtagaattaggttttgaaactaaaactgattgtagaaagagtagataatccgatga 22258453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 4380572 - 4380713
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataag-tatgtaatcctgaag 99  Q
    |||||| ||||||||||||| |||||| ||||||||||||||| |||||||||||||||  ||||||| |||| ||||  |||| | | |||| |||||     
T  4380572 agagtcggagaagagaaagccgtagaaccttgcgatcatctaacctaaggtaagggtgg--gactaactttctctaattctaagttgtataattctgaaa 4380669  T
Q  100 aagggtttaatcttgtagttgttaataggttttgatgttgtagaa 144  Q
    |||||||||| ||||||||||||  || ||||||||||| |||||    
T  4380670 aagggtttaaccttgtagttgttgtta-gttttgatgttatagaa 4380713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 36732367 - 36732424
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtg 58  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  36732367 agagtcagagaagagaaagcggtagaaccttgcgatcatctaacctaaggtaagggtg 36732424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 5761630 - 5761570
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtggga 61  Q
    |||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||    
T  5761630 agagtcagagaagagaaaacggtagaaccttgcgatcatctaacctaaggtaagggtggga 5761570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 138
Target Start/End: Complemental strand, 20879528 - 20879435
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgtt 138  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| |  | || || |||||||||| ||||||||| ||||| ||||||||||||    
T  20879528 aatctaaggtaagggtggga--ctaaccttctttaatcataagtatatggttctaaaaaagggtttaagcttgtagttattaat-ggttttgatgtt 20879435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21514788 - 21514728
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtggga 61  Q
    |||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||||    
T  21514788 agagtcggagaagagaaagcggtagaaccttgcgatcatctaacttaaggtaagggtggga 21514728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22317866 - 22317926
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtggga 61  Q
    |||||||||| |||||||||||||||| ||||||||||   ||||||||||||||||||||    
T  22317866 agagtcagaggagagaaagcggtagaaccttgcgatcaatcaatctaaggtaagggtggga 22317926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 20022016 - 20022055
Alignment:
Q  22 gtagaatcttgcgatcatctaatctaaggtaagggtggga 61  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  20022016 gtagaatcttccgatcatctaatctaaggtaagggtggga 20022055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 20517032 - 20517080
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaat 92  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  20517032 aatctaaggtaagggtggga--ctaaccttctttaatcataagtatataat 20517080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 138
Target Start/End: Complemental strand, 22966815 - 22966772
Alignment:
Q  95 tgaagaagggtttaatcttgtagttgttaataggttttgatgtt 138  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  22966815 tgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 22966772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22532087 - 22532147
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtggga 61  Q
    |||||||||||||||||| || ||||| || |||||||   ||||||||||||||||||||    
T  22532087 agagtcagagaagagaaaacgatagaacctcgcgatcaatcaatctaaggtaagggtggga 22532147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22536772 - 22536832
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtggga 61  Q
    |||||||||||||||||| || ||||| || |||||||   ||||||||||||||||||||    
T  22536772 agagtcagagaagagaaaacgatagaacctcgcgatcaatcaatctaaggtaagggtggga 22536832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 138
Target Start/End: Original strand, 21697512 - 21697550
Alignment:
Q  100 aagggtttaatcttgtagttgttaataggttttgatgtt 138  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  21697512 aagggtttaacattgtagttgttaataggttttgatgtt 21697550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 42265464 - 42265524
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtggga 61  Q
    ||||||||| || |||||||||| ||| ||||||||||   |||| |||||||||||||||    
T  42265464 agagtcagataaaagaaagcggtggaaccttgcgatcaatcaatccaaggtaagggtggga 42265524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 33551 - 33360
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaaga 100  Q
    ||||||||||||||||||||||||||| ||||||||||   ||||||||||||||||||||  |||||||||||||||||||||||| |||||||||| |    
T  33551 agagtcagagaagagaaagcggtagaaccttgcgatcaatcaatctaaggtaagggtggga--ctaaccttctttaatcataagtatttaatcctgaaaa 33454  T
Q  101 agggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||| |||||||||||||||||    
T  33453 agggtttaaacgtgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgattgttgaaatagtagataatccgatga 33360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 9159 - 8969
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaaga 100  Q
    |||||||||| ||||||||||||||| || | ||   ||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |    
T  9159 agagtcagaggagagaaagcggtagagtccttcgtcgatc-aatctaaggtaagggtggga--ctaaccttctttaatcataagtatgtaatcctgaaaa 9063  T
Q  101 agggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||    
T  9062 agggtttaatcttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtatataatgcgatga 8969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 131; Significance: 5e-68; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 14318168 - 14317978
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaaga 100  Q
    |||||||||||||||||||||||||| || | ||   ||| |||||||||||||||||||| |  ||||||||||||||||||||||||||||||||| |    
T  14318168 agagtcagagaagagaaagcggtagagtccttcgtcgatc-aatctaaggtaagggtgggaca--aaccttctttaatcataagtatgtaatcctgaaaa 14318072  T
Q  101 agggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14318071 agggtttaaccttgcagttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 14317978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 33 - 194
Target Start/End: Original strand, 14160843 - 14161002
Alignment:
Q  33 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggtttt 132  Q
    |||||||||||| |||| |||||||||||  ||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||    
T  14160843 cgatcatctaatttaagataagggtggga--ctaaccttctttaatcataagtatgtaatcctgaaaaggggtttaaccttgtagttgttaataggtttt 14160940  T
Q  133 gatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||    
T  14160941 gatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtagataattcgatga 14161002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 62 - 194
Target Start/End: Original strand, 9743093 - 9743225
Alignment:
Q  62 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 161  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  9743093 gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataagttttgatgttgtagaattagggtttgaaactaa 9743192  T
Q  162 aattgatcgtagaaagagtagataatccgatga 194  Q
    |||||||||||||||||||||||||||||||||    
T  9743193 aattgatcgtagaaagagtagataatccgatga 9743225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 45 - 194
Target Start/End: Original strand, 15119306 - 15119453
Alignment:
Q  45 ctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa 144  Q
    ||||||||||||| |||  |||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||| ||||||||||||||||    
T  15119306 ctaaggtaagggtagga--ctaaccttctttaatcataagtatgtaatcttgaaaaagggtttaaccttgtagttgttaatagattttgatgttgtagaa 15119403  T
Q  145 ttaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15119404 ttagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 15119453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 33 - 194
Target Start/End: Original strand, 43276731 - 43276890
Alignment:
Q  33 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagta-tgtaatcctgaagaagggtttaatcttgtagttgttaataggttt 131  Q
    |||||||||||| ||||||||||||||||  ||||| |||| |||| ||  ||  | |||| ||||| || ||||||| |||||||||||||||||||||    
T  43276731 cgatcatctaatttaaggtaagggtggga--ctaactttctctaataatgggttgtataattctgaa-aatggtttaaccttgtagttgttaataggttt 43276827  T
Q  132 tgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||    
T  43276828 tgatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtaaataatccgatga 43276890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 100 - 191
Target Start/End: Original strand, 8513806 - 8513898
Alignment:
Q  100 aagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtag-aaagagtagataatccga 191  Q
    |||||||||| |||||||||||| ||||||||||||| |||||||||| ||||||||||||||| | || |||| ||||||||||||||||||    
T  8513806 aagggtttaaccttgtagttgtttataggttttgatgctgtagaattagggtttgaaactaaaactaattgtagaaaagagtagataatccga 8513898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 4690618 - 4690759
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataag-tatgtaatcctgaag 99  Q
    ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| |||||  ||||||| |||| ||||  |||| | | |||| |||||     
T  4690618 agagtcagagaagagaaagcgatagaaccttgcgatcatctaacctaaggtaaaggtgg--gactaactttctctaattctaagttgtataattctgaaa 4690715  T
Q  100 aagggtttaatcttgtagttgttaataggttttgatgttgtagaa 144  Q
    |||||||||| ||||||||||||| ||  |||||||||| |||||    
T  4690716 aagggtttaaccttgtagttgttatta-cttttgatgttatagaa 4690759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 43745753 - 43745612
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataag-tatgtaatcctgaag 99  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||  ||||| | |||| |||| || || | | ||||  ||||     
T  43745753 agagtcagagaagagaaagcggtagaaccttgcgatcatctaacctaaggtaagggtgg--gactagctttctctaataatgagttgtataattatgaaa 43745656  T
Q  100 aagggtttaatcttgtagttgttaataggttttgatgttgtagaa 144  Q
    |||||||||| ||||||||||||  || ||||||||||| |||||    
T  43745655 aagggtttaaccttgtagttgttgtta-gttttgatgttatagaa 43745612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 42565829 - 42565907
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgtt 122  Q
    |||||||||||||||||  ||||||| ||||||||||||||| ||| |||| ||||| |||||||||||||||||||||||    
T  42565829 aatctaaggtaagggtg--agactaatcttctttaatcataaatatataattctgaaaaagggtttaatcttgtagttgtt 42565907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 48212682 - 48212739
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtg 58  Q
    ||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||    
T  48212682 agagtcagagaagagaaagtggtagaaccttgcgatcatctaacctaaggtaagggtg 48212739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 156
Target Start/End: Complemental strand, 33060494 - 33060383
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 141  Q
    ||||||||||||||||||||  |||||||||||||||||| ||| | |||| ||| | ||||||||||| |||| |||||| |||  |||||||||  ||    
T  33060494 aatctaaggtaagggtggga--ctaaccttctttaatcatgagtctataattctggaaaagggtttaattttgttgttgtttata-attttgatgtaata 33060398  T
Q  142 gaattaaggtttgaa 156  Q
    ||| | |||||||||    
T  33060397 gaagttaggtttgaa 33060383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 8135193 - 8135275
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagt 85  Q
    |||| ||||||||| |||||||||||| |||| |||||   ||||||||||||||||  |||||||||||||  ||||| |||||    
T  8135193 agagccagagaagataaagcggtagaaccttgtgatcaatcaatctaaggtaagggt--gagactaaccttcactaatcctaagt 8135275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 147
Target Start/End: Original strand, 8488147 - 8488194
Alignment:
Q  100 aagggtttaatcttgtagttgttaataggttttgatgttgtagaatta 147  Q
    |||||||||| ||| |||||||| ||||||||||||| ||||||||||    
T  8488147 aagggtttaaccttatagttgtttataggttttgatgctgtagaatta 8488194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 15095606 - 15095652
Alignment:
Q  15 gaaagcggtagaatcttgcgatcatctaatctaaggtaagggtggga 61  Q
    ||||||||||||| ||||||||||   ||||||||||||||||||||    
T  15095606 gaaagcggtagaaccttgcgatcaatcaatctaaggtaagggtggga 15095652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24269901 - 24269962
Alignment:
Q  1 agagtcagagaagagaaagc-ggtagaatcttgcgatcatctaatctaaggtaagggtggga 61  Q
    ||||||||||||||||||||  |||||| ||||  |||| | ||||||||||||||||||||    
T  24269901 agagtcagagaagagaaagcttgtagaaccttgtaatcaaccaatctaaggtaagggtggga 24269962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 61
Target Start/End: Original strand, 58400 - 58428
Alignment:
Q  33 cgatcatctaatctaaggtaagggtggga 61  Q
    |||||||||||||||||||||||||||||    
T  58400 cgatcatctaatctaaggtaagggtggga 58428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 61
Target Start/End: Original strand, 12127150 - 12127178
Alignment:
Q  33 cgatcatctaatctaaggtaagggtggga 61  Q
    |||||||||||||||||||||||||||||    
T  12127150 cgatcatctaatctaaggtaagggtggga 12127178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 61
Target Start/End: Complemental strand, 19195676 - 19195648
Alignment:
Q  33 cgatcatctaatctaaggtaagggtggga 61  Q
    |||||||||||||||||||||||||||||    
T  19195676 cgatcatctaatctaaggtaagggtggga 19195648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 57070 - 56882
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaaga 100  Q
    ||||||||||||||||||| ||||||| || |||||||| ||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||| |    
T  57070 agagtcagagaagagaaagtggtagaacctggcgatcatataacctaaggtaagggtggga--ctaaccttctttaatcataagtatgtaatcctgaaaa 56973  T
Q  101 agggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    |||   ||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||    
T  56972 agg---taaccttgtagatgttaataggttttgatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtagataattcgatga 56882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 45 - 194
Target Start/End: Complemental strand, 174274 - 174127
Alignment:
Q  45 ctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa 144  Q
    |||| ||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  174274 ctaaagtaagggtggga--ctaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaa 174177  T
Q  145 ttaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  174176 ttagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 174127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 42 - 194
Target Start/End: Complemental strand, 62774 - 62624
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 141  Q
    |||||||||||||| ||  |||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||    
T  62774 aatctaaggtaaggatg--agactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtggttgttaataggttttgatgttgta 62677  T
Q  142 gaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  62676 gaattagggtttgaaactaaaattgattgtagaaagagtagataatccgatga 62624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 117; Significance: 1e-59; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 47 - 194
Target Start/End: Original strand, 23968624 - 23968769
Alignment:
Q  47 aaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaatt 146  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||| || ||||||| |||||||| |||||||||||||||||||||||||||    
T  23968624 aaggtaagggtg--agactaaccttctttaatcataagtatgtaatcctgaaaaaaggtttaaccttgtagtcgttaataggttttgatgttgtagaatt 23968721  T
Q  147 aaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||    
T  23968722 agggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 23968769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 33 - 194
Target Start/End: Original strand, 14179715 - 14179874
Alignment:
Q  33 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggtttt 132  Q
    |||||||||||| ||||||||||||||||  |||||||||||||||||| |||||||||||||||| || ||||||  ||| || |||||||||| ||||    
T  14179715 cgatcatctaatataaggtaagggtggga--ctaaccttctttaatcatgagtatgtaatcctgaaaaaaggtttatccttatacttgttaatagatttt 14179812  T
Q  133 gatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    |||||||| |||||| |||||||||||||||||||| ||||||||||||||||||| |||||    
T  14179813 gatgttgtggaattagggtttgaaactaaaattgattgtagaaagagtagataatctgatga 14179874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 33 - 194
Target Start/End: Original strand, 14183453 - 14183612
Alignment:
Q  33 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggtttt 132  Q
    |||||||||||| ||||||||||||||||  |||||||||||||||||| |||||||||||||||| || | ||||  ||| || |||||||||||||||    
T  14183453 cgatcatctaatttaaggtaagggtggga--ctaaccttctttaatcatgagtatgtaatcctgaaaaaagatttatccttatacttgttaataggtttt 14183550  T
Q  133 gatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    |||||||| |||||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  14183551 gatgttgtggaattagggtttgaaactaaaattgattgtagaaagggtagataatccgatga 14183612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 50 - 194
Target Start/End: Complemental strand, 24718067 - 24717925
Alignment:
Q  50 gtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaag 149  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||||||| | |||||||| |||||| |||| ||||||||||||||||| ||||||  |    
T  24718067 gtaagggtggga--ctaacattctttaatcataagtatgtaatcctgaaaaggggtttaaccttgtatttgtcaataggttttgatgttgcagaattcgg 24717970  T
Q  150 gtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  24717969 gtttgaaactaaaattgattgtagaaagagtagataatccgatga 24717925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 42 - 127
Target Start/End: Complemental strand, 19647289 - 19647206
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaatag 127  Q
    ||||||||||| |||||  ||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||    
T  19647289 aatctaaggtatgggtg--agactaaccttctttaatcataagtatataattctgaaaaagggtttaatcttgtagttgttaatag 19647206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 156
Target Start/End: Original strand, 20005967 - 20006078
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 141  Q
    ||||||||||||||||||||  ||| |||||||||||||| ||| | |||| ||||| ||||||||||| |||| ||||||||||  |||||||||| ||    
T  20005967 aatctaaggtaagggtggga--ctagccttctttaatcatgagtctataattctgaaaaagggtttaattttgttgttgttaata-attttgatgttata 20006063  T
Q  142 gaattaaggtttgaa 156  Q
    ||| | |||||||||    
T  20006064 gaagttaggtttgaa 20006078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 19201155 - 19201230
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaat 78  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||  ||||||||| |||| ||||    
T  19201155 agagtcagagaagagaaagcggtagaaccttgcgatcatctaacctaagttaagggt--gagactaactttctctaat 19201230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 144
Target Start/End: Original strand, 28652548 - 28652648
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatc-ttgtagttgttaataggttttgatgttgt 140  Q
    ||||||||||||||||||||  ||||||||| ||||||||||||||||||| ||||| |||||||||  | |||||||||||  || ||||||||||| |    
T  28652548 aatctaaggtaagggtggga--ctaaccttcattaatcataagtatgtaattctgaaaaagggtttagcctttgtagttgttgtta-gttttgatgttat 28652644  T
Q  141 agaa 144  Q
    ||||    
T  28652645 agaa 28652648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 45535981 - 45535903
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgtt 122  Q
    ||||||||||||||||||||  |||||||||||||||||  ||| | |||| ||||| |||||||||||||||| ||||||    
T  45535981 aatctaaggtaagggtggga--ctaaccttctttaatcacgagtctataattctgaaaaagggtttaatcttgttgttgtt 45535903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 149449 - 149514
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttg-------cgatcatctaatctaaggtaagggtgg 59  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||    
T  149449 agagtcagagaagagaaagcggtagaatcttgtagagtccgatcatctaatctaaggtaagggtgg 149514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 18388151 - 18388214
Alignment:
Q  7 agagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttc 72  Q
    ||||||||||||||||||||| ||||||||||   ||||||||||||||||  |||||||||||||    
T  18388151 agagaagagaaagcggtagaaccttgcgatcaatcaatctaaggtaagggt--gagactaaccttc 18388214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 23610717 - 23610663
Alignment:
Q  7 agagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtggga 61  Q
    |||||||||||| |||||||| ||||||| ||||||| |||||||||||||||||    
T  23610717 agagaagagaaaacggtagaaccttgcgaacatctaacctaaggtaagggtggga 23610663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22502075 - 22502008
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttg-------cgatcatctaatctaaggtaagggtggga 61  Q
    ||||||||| ||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  22502075 agagtcagaaaagagaaagcggtagaatcttgtagagtccgatcatctaatctaaggtaagggtggga 22502008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22510009 - 22509942
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttg-------cgatcatctaatctaaggtaagggtggga 61  Q
    ||||||||| ||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  22510009 agagtcagaaaagagaaagcggtagaatcttgtagagtccgatcatctaatctaaggtaagggtggga 22509942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 194
Target Start/End: Original strand, 149585 - 149652
Alignment:
Q  128 gttttgatgttgtagaa-ttaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||||||||||| ||||| ||| ||||||||| |||||||||| || |||||||||| |||||||||||    
T  149585 gttttgatgttatagaaattagggtttgaaattaaaattgattgttgaaagagtaggtaatccgatga 149652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 12626374 - 12626488
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttg-------cgatcat-ctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaat 92  Q
    |||||| |||||||||||| ||||||||||||       ||||||| | ||| ||||||||||||||||  ||||||||| |||||||||||| | ||||    
T  12626374 agagtcggagaagagaaagtggtagaatcttgtagagtccgatcattcaaatgtaaggtaagggtggga--ctaaccttcattaatcataagtgtataat 12626471  T
Q  93 cctgaagaagggtttaa 109  Q
     ||||| ||||||||||    
T  12626472 tctgaaaaagggtttaa 12626488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 25584280 - 25584358
Alignment:
Q  65 taaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa 144  Q
    ||||||||||||||||| ||||| |||| ||||| |||||||||| ||||| |||| | ||| ||||||||||| |||||    
T  25584280 taaccttctttaatcatgagtatataattctgaaaaagggtttaaccttgtcgttgatgata-gttttgatgttatagaa 25584358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 194
Target Start/End: Original strand, 12626535 - 12626578
Alignment:
Q  151 tttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    |||||||||||||||||| || |||||||||| |||||||||||    
T  12626535 tttgaaactaaaattgattgttgaaagagtaggtaatccgatga 12626578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 61
Target Start/End: Complemental strand, 17307551 - 17307523
Alignment:
Q  33 cgatcatctaatctaaggtaagggtggga 61  Q
    |||||||||||||||||||||||||||||    
T  17307551 cgatcatctaatctaaggtaagggtggga 17307523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 61
Target Start/End: Complemental strand, 21369358 - 21369330
Alignment:
Q  33 cgatcatctaatctaaggtaagggtggga 61  Q
    |||||||||||||||||||||||||||||    
T  21369358 cgatcatctaatctaaggtaagggtggga 21369330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 45 - 194
Target Start/End: Original strand, 10445 - 10592
Alignment:
Q  45 ctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa 144  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||    
T  10445 ctaaggtaagggtggga--ctaaccttctttaatcataagtatgtaatcctgaaaaagggtttaacattgtagttgttaataggttttgatgttgtagaa 10542  T
Q  145 ttaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||| |||||||||||||||||||| |||||||||||||||||| ||||||    
T  10543 ttagggtttgaaactaaaattgattgtagaaagagtagataatacgatga 10592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 3927 - 3853
Alignment:
Q  45 ctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgtt 122  Q
    |||||||||||||| ||  | |||||||||||| |||||||||||||||||||| |||| ||||| | ||||||||||    
T  3927 ctaaggtaagggtgtga--ccaaccttctttaaacataagtatgtaatcctgaaaaaggatttaa-catgtagttgtt 3853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 5 - 194
Target Start/End: Complemental strand, 6511 - 6322
Alignment:
Q  5 tcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagta-tgtaatcctgaagaagg 103  Q
    ||||||||||||||||||||||| ||||||||||   ||||||||||||||||   |||||| | |||| |||| || |||  |||||| ||||| ||||    
T  6511 tcagagaagagaaagcggtagaaccttgcgatcaatcaatctaaggtaagggta--agactagctttctctaataatgagttgtgtaattctgaaaaagg 6414  T
Q  104 gtttaatcttgtagttgttaataggttttga-tgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    | ||||||||||||||||| ||||||||| | ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  6413 gattaatcttgtagttgtttataggtttttaatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtagataatccgatga 6322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 100 - 194
Target Start/End: Complemental strand, 5630 - 5536
Alignment:
Q  100 aagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  5630 aagggtttaactttgtagttgttaataggttttgatgttgtagaattagggtttggaactaaaattgatcgtagaaagagtagataatccgatga 5536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1437 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold1437
Description:

Target: scaffold1437; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 75 - 194
Target Start/End: Original strand, 321 - 440
Alignment:
Q  75 taatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtaga 174  Q
    ||||||||||||||| ||||  || ||||||||||  |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| || |    
T  321 taatcataagtatgtcatccaaaaaaagggtttaacattgtagttgttaataggttttgatgttgtaaaattaaggttggaaactaaaattgatcataaa 420  T
Q  175 aagagtagataatccgatga 194  Q
    |||| |||||||||||||||    
T  421 aagattagataatccgatga 440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1160 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 101 - 194
Target Start/End: Complemental strand, 683 - 590
Alignment:
Q  101 agggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    |||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  683 agggtttaacattgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgatcatagaaagagtatataatccgatga 590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 6375 - 6514
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaaga 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||  ||||||||||| ||||||||||||||||||| || || |    
T  6375 agagtcagagaagagaaagcggtagaaccttgcgatcatctaacctaaggtaagggtgg--gactaaccttcattaatcataagtatgtaattct-aaaa 6471  T
Q  101 agggtttaatc-ttgtagttgttaataggttttgatgttgtaga 143  Q
    ||||||||| | |||||||||||  || ||||||||||| ||||    
T  6472 agggtttaacctttgtagttgttgtta-gttttgatgttataga 6514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 100 - 194
Target Start/End: Complemental strand, 20199 - 20105
Alignment:
Q  100 aagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||| ||||||||| |||||||||||||||    
T  20199 aagggtttaaccttgtagttgttaataggttttgatgttttagaattagggtttgaaattaaaattgattgtagaaagaatagataatccgatga 20105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 42 - 194
Target Start/End: Original strand, 38438 - 38588
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 141  Q
    ||||||||||||||||| ||  |||||||||||||||||| ||||| |||| ||||| ||||||||||| ||||||||||||||| ||||||||||| ||    
T  38438 aatctaaggtaagggtgtga--ctaaccttctttaatcatgagtatataattctgaaaaagggtttaattttgtagttgttaata-gttttgatgttata 38534  T
Q  142 gaattaaggtttgaaacta-aaattgatcgtagaaagagtagataatccgatga 194  Q
    ||| | |||||| ||| || || ||||| || ||||| |||| |||||| ||||    
T  38535 gaagttaggttttaaattacaatttgattgttgaaagtgtaggtaatccaatga 38588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 59; Significance: 5e-25; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 169408 - 169346
Alignment:
Q  132 tgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  169408 tgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 169346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 40 - 127
Target Start/End: Complemental strand, 17163 - 17078
Alignment:
Q  40 ctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaatag 127  Q
    ||||||||||||||||||||||  | || ||||||||||||| ||||| |||| || || ||||||||||  ||||||||||| ||||    
T  17163 ctaatctaaggtaagggtggga--cgaatcttctttaatcatgagtatataattcttaaaaagggtttaactttgtagttgttgatag 17078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 40 - 127
Target Start/End: Complemental strand, 26694 - 26609
Alignment:
Q  40 ctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaatag 127  Q
    ||||||||||||||||||||||  | || ||||||||||||| ||||| |||| || || ||||||||||  ||||||||||| ||||    
T  26694 ctaatctaaggtaagggtggga--cgaatcttctttaatcatgagtatataattcttaaaaagggtttaactttgtagttgttgatag 26609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 127
Target Start/End: Complemental strand, 28769 - 28686
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaatag 127  Q
    ||||||||||||| ||||||  |||||||||||||||||||||||| |||| ||||| ||| ||||||||||||||||||||||||    
T  28769 aatctaaggtaagagtggga--ctaaccttctttaatcataagtatataattctgaaaaagcgtttaatcttgtagttgttaatag 28686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 40 - 153
Target Start/End: Complemental strand, 31987 - 31877
Alignment:
Q  40 ctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttg 139  Q
    |||||||||||||||||||  ||||||||| ||||||||||| ||||| | || ||||| ||||||||||| || |||||||||||| ||||||||||||    
T  31987 ctaatctaaggtaagggtg--agactaaccatctttaatcatgagtatatgattctgaaaaagggtttaattttatagttgttaata-gttttgatgttg 31891  T
Q  140 tagaattaaggttt 153  Q
    ||||| | ||||||    
T  31890 tagaagttaggttt 31877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 110
Target Start/End: Complemental strand, 32100 - 32038
Alignment:
Q  46 taaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaat 110  Q
    |||||||||||||||   |||||||||||||||||| ||||| | || ||||| |||||||||||    
T  32100 taaggtaagggtgggg--ctaaccttctttaatcatgagtatatgattctgaaaaagggtttaat 32038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 153
Target Start/End: Complemental strand, 3260 - 3152
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 141  Q
    ||||||||||||||||||||  |||||||||||||||||| ||||| ||||  |||| ||||||||||| ||||||||||| ||| ||||||||||| ||    
T  3260 aatctaaggtaagggtggga--ctaaccttctttaatcatgagtatataattatgaaaaagggtttaattttgtagttgttgata-gttttgatgttata 3164  T
Q  142 gaattaaggttt 153  Q
    ||| | ||||||    
T  3163 gaagttaggttt 3152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 153
Target Start/End: Complemental strand, 23669 - 23561
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 141  Q
    ||||||||||||||||||||  || ||||||||||||||| ||||| |||| || || ||||||||||| ||||||||||||||| ||||||||||| ||    
T  23669 aatctaaggtaagggtggga--ctgaccttctttaatcatgagtatataattctaaaaaagggtttaattttgtagttgttaata-gttttgatgttata 23573  T
Q  142 gaattaaggttt 153  Q
    ||| | ||||||    
T  23572 gaagttaggttt 23561  T

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Target: scaffold0017; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 26818 - 26764
Alignment:
Q  7 agagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtggga 61  Q
    ||||||||||||||||||||| ||||||||||   |||||| |||||||||||||    
T  26818 agagaagagaaagcggtagaaccttgcgatcaatcaatctacggtaagggtggga 26764  T

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Target: scaffold0056 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18372 - 18315
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtg 58  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  18372 agagtcagagaagagaaagcggtagaaccttgcgatcatctaacctaaggtaagggtg 18315  T

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Target: scaffold1256 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 2162 - 2275
Alignment:
Q  8 gagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataag-tatgtaatcctgaagaagggtt 106  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||  ||||||  |||| ||||  |||| | | |||| ||||| |||||||    
T  2162 gagaagagaaagcggtagaaccttgcgatcatctaacctaaggtaagggtgg--gactaattttctctaattctaagttgtataattctgaaaaagggtt 2259  T
Q  107 taatcttgtagttgtt 122  Q
    ||| ||||||||||||    
T  2260 taaccttgtagttgtt 2275  T

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Target: scaffold0516 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 5267 - 5380
Alignment:
Q  8 gagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagta-tgtaatcctgaagaagggtt 106  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||  ||||| |||| ||||  |||||  | |||| || || |||||||    
T  5267 gagaagagaaagcggtagaaccttgcgatcatctaacctaaggtaagggtggga--ctaactttctctaattttaagttgtataattcttaaaaagggtt 5364  T
Q  107 taatcttgtagttgtt 122  Q
    ||| ||||||||||||    
T  5365 taaccttgtagttgtt 5380  T

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Target: scaffold0516; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 5170 - 5223
Alignment:
Q  8 gagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtggga 61  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  5170 gagaagagaaagcggtagaaccttgcgatcatctaacctaaggtaagggtggga 5223  T

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Target: scaffold0004 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 328243 - 328303
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtggga 61  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  328243 agagtgagagaagagaaagcggtagaaccttgcgatcatctaacctaaggtaagggtggga 328303  T

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Target: scaffold1939 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 181 - 38
Alignment:
Q  44 tctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtaga 143  Q
    ||||||||||||||||||  |||||||||||||||||| ||||| |  | ||||| |||||||| |  ||||||||||||||| ||||||||||| ||||    
T  181 tctaaggtaagggtggga--ctaaccttctttaatcattagtatatggttctgaaaaagggttttaatttgtagttgttaata-gttttgatgttataga 85  T
Q  144 attaaggtttgaaact-aaaattgatcgtagaaagagtagataatcc 189  Q
    | | ||| || ||| | ||||||||| || |||||||||| ||||||    
T  84 agttagggttaaaattgaaaattgattgttgaaagagtaggtaatcc 38  T

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Target: scaffold0059 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 49827 - 49686
Alignment:
Q  1 agagtcagagaagagaaagcg-gtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaag 99  Q
    ||||||||||||||||||||  |||||| ||||  |||| | ||||||||||||||||||||  |||||||||||||||||| |||   |||| |||||     
T  49827 agagtcagagaagagaaagcttgtagaaccttgtaatcaaccaatctaaggtaagggtggga--ctaaccttctttaatcatgagtccataattctgaaa 49730  T
Q  100 aagggtttaatcttgtagttgttaataggttttgatgttgtagaa 144  Q
    ||||||||||| || |  ||||| ||| ||||||||||| |||||    
T  49729 aagggtttaattttatttttgttgata-gttttgatgttatagaa 49686  T

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Target: scaffold0394 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 153
Target Start/End: Original strand, 7510 - 7618
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 141  Q
    ||||||||||||||||||||  ||||||||||||||| || ||||| | || ||||| ||||||||||| || |||||||| ||| ||||||||||| ||    
T  7510 aatctaaggtaagggtggga--ctaaccttctttaattatgagtatatgattctgaaaaagggtttaattttatagttgttgata-gttttgatgttata 7606  T
Q  142 gaattaaggttt 153  Q
    ||| | ||||||    
T  7607 gaagttaggttt 7618  T

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Target: scaffold0058 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 153
Target Start/End: Original strand, 59652 - 59760
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 141  Q
    |||||||||||||||||||   |||||||||||||||||| ||||| |||| ||||| ||||||||||  ||||||||||| ||| |||||||| || ||    
T  59652 aatctaaggtaagggtgggt--ctaaccttctttaatcatgagtatataattctgaaaaagggtttaactttgtagttgttgata-gttttgatattata 59748  T
Q  142 gaattaaggttt 153  Q
    ||| | ||||||    
T  59749 gaaattaggttt 59760  T

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Target: scaffold0203 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 17888 - 18036
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttg-------cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataag-tatgtaat 92  Q
    |||||||||||||||||| |||||||||||||       |||||||||||||||||||||||||||  ||||||| |||| ||||  |||| | | ||||    
T  17888 agagtcagagaagagaaaacggtagaatcttgtagaatccgatcatctaatctaaggtaagggtgg--gactaactttctctaattctaagttgtataat 17985  T
Q  93 cctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa 144  Q
     ||||| |||| ||||| ||||||||||||  || ||||||||||| |||||    
T  17986 tctgaaaaaggatttaaccttgtagttgttgtta-gttttgatgttatagaa 18036  T

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Target: scaffold1102 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold1102
Description:

Target: scaffold1102; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 1947 - 2029
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaata 126  Q
    |||||||||||| |||||||  |||||||||||||||||| ||| | |||| ||||| ||||||||||| |||| ||||||||||    
T  1947 aatctaaggtaacggtggga--ctaaccttctttaatcatgagtctataattctgaaaaagggtttaattttgttgttgttaata 2029  T

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Target: scaffold0125 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 28614 - 28528
Alignment:
Q  35 atcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatc-ttgtagttgtt 122  Q
    |||||||||||||||||||| ||||||  ||||||||| |||||||| ||||| |||| ||||| |||||||||| | |||||||||||    
T  28614 atcatctaatctaaggtaagagtggga--ctaaccttccttaatcatgagtatataattctgaaaaagggtttaacctttgtagttgtt 28528  T

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Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 158777 - 158837
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttgcgatcatctaatctaaggtaagggtggga 61  Q
    |||||||||||||||||||||||| || ||||||||||   ||||||||||||||||||||    
T  158777 agagtcagagaagagaaagcggtaaaaccttgcgatcaatcaatctaaggtaagggtggga 158837  T

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Target: scaffold1800 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 156
Target Start/End: Complemental strand, 663 - 552
Alignment:
Q  42 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 141  Q
    ||||||||||||||||||||  |||||||||||||||||| ||| | |||| || || || |||||||| |||| |||||| |||  |||||||||| ||    
T  663 aatctaaggtaagggtggga--ctaaccttctttaatcatgagtctataattcttaaaaatggtttaattttgttgttgttgata-attttgatgttata 567  T
Q  142 gaattaaggtttgaa 156  Q
    ||| | |||||||||    
T  566 gaagttaggtttgaa 552  T

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Target: scaffold0111 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12481 - 12548
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttg-------cgatcatctaatctaaggtaagggtggga 61  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||| |||||||||||||||    
T  12481 agagtcagagaagagaaagcggtagaatcttgtagagtccgatcatctaatccaaggtaagggtggga 12548  T

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Target: scaffold0213 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 150
Target Start/End: Complemental strand, 19272 - 19157
Alignment:
Q  33 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagta-tgtaatcctgaagaagggtttaatcttgtagttgttaataggttt 131  Q
    |||| ||||||||||| ||||||||||||  ||||| |||| ||||  |||||  | |||| ||||| |||||||||| ||||||||||||| || ||||    
T  19272 cgatgatctaatctaacgtaagggtggga--ctaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttatta-gttt 19176  T
Q  132 tgatgttgtagaattaagg 150  Q
    ||||||| ||||| |||||    
T  19175 tgatgttatagaaataagg 19157  T

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Target: scaffold0145 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 138
Target Start/End: Complemental strand, 8129 - 8086
Alignment:
Q  95 tgaagaagggtttaatcttgtagttgttaataggttttgatgtt 138  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  8129 tgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 8086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 138
Target Start/End: Complemental strand, 29316 - 29273
Alignment:
Q  95 tgaagaagggtttaatcttgtagttgttaataggttttgatgtt 138  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  29316 tgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 29273  T

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Target: scaffold0628 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 1034 - 1073
Alignment:
Q  22 gtagaatcttgcgatcatctaatctaaggtaagggtggga 61  Q
    |||||| ||| |||||||||||||||||||||||||||||    
T  1034 gtagaaccttccgatcatctaatctaaggtaagggtggga 1073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 194
Target Start/End: Complemental strand, 2189 - 2146
Alignment:
Q  151 tttgaaactaaaattgatcgtagaaagagtagataatccgatga 194  Q
    |||||||||||||||||| || |||||||||| |||||||||||    
T  2189 tttgaaactaaaattgattgttgaaagagtaggtaatccgatga 2146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 18589 - 18655
Alignment:
Q  1 agagtcagagaagagaaagcggtagaatcttg-------cgatcatctaatctaaggtaagggtggga 61  Q
    |||||||||||||||||||||  |||||||||       |||||||||||||||||||||||||||||    
T  18589 agagtcagagaagagaaagcga-agaatcttgtagagtccgatcatctaatctaaggtaagggtggga 18655  T

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Target: scaffold0555 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 8722 - 8758
Alignment:
Q  22 gtagaatcttgcgatcatctaatctaaggtaagggtg 58  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  8722 gtagaaccttccgatcatctaatctaaggtaagggtg 8758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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