View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18406_high_7 (Length: 583)
Name: NF18406_high_7
Description: NF18406
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18406_high_7 |
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Alignment Details
Target: chr6 (Bit Score: 529; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 529; E-Value: 0
Query Start/End: Original strand, 24 - 572
Target Start/End: Complemental strand, 20366953 - 20366405
Alignment:
| Q |
24 |
gcgcacccgaaatagtagggtaattcctgtagattttgttgatttaccaacaatcgttcagaccatttgctgttagatacttttttcattgtagttttgc |
123 |
Q |
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| T |
20366953 |
gcgcacccgaaatagtagggtaattcctgtagattttgttgatttaccaacaatcgttcagactatttgctgttagatacttttttcattgtagttttgc |
20366854 |
T |
|
| Q |
124 |
aagtggatgaaatttattttgctgctgtctttctatgcatttttgggtttatttatgtaactattctcctttggttggaaaaatgctgtgacctttgaat |
223 |
Q |
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| T |
20366853 |
aagtggatgaaatttattttgctgttgtctttctatgcatttttgggtttatttatgtaactattctcctttggttggaaaaatgctgtgacctttgaat |
20366754 |
T |
|
| Q |
224 |
atgattgaagataattagaaatggggattcttccctattccatgcaccaaaaatagattggtttagaatttgcataatgtctttaaataatcgatggtaa |
323 |
Q |
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| T |
20366753 |
atgattgaagataattagaaatggggattcttccctattccatgcaccaaaaatagattggtttagaatttgcataatgtctttaaataatcgatggtaa |
20366654 |
T |
|
| Q |
324 |
taaaattggtttgtctttggaaagaaacttttaatgtgagtttaaaagaattggtattgtttaaatagtaaagaagaatcacttctatggagatactgac |
423 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
20366653 |
taaaattggtttgtctttggaaagaaacttttaatgtgagtttaaaagaattggtattgtttaaatagtaaagaagaatcacttctaaggagatactgac |
20366554 |
T |
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| Q |
424 |
ttttctcaaaatcaatttcagtcaaaatgatttttcaacctaaatataaccaaacatcttcttaccttacaaccacatttattttgaccaaaacttaatt |
523 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20366553 |
ttttctcaaaatcaatttcagtcaaaatgatttttcaacttaaatataaccaaacatcttcttaccttacaaccacatttattttgaccaaaacttaatt |
20366454 |
T |
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| Q |
524 |
tctagccaaactaactaactctacgacattgttaatttgttataccttt |
572 |
Q |
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| T |
20366453 |
tctagccaaacaaactaactctacgacattgttaatttgttataccttt |
20366405 |
T |
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