View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18406_low_103 (Length: 232)
Name: NF18406_low_103
Description: NF18406
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18406_low_103 |
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Alignment Details
Target: chr6 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 33759157 - 33759381
Alignment:
| Q |
1 |
tagtaatgctagaagttccaaatagtatagttagttgttcaggtttaacttgttaaagtattgaatataaggcagtgttgtcaagtagcggcaataacaa |
100 |
Q |
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| T |
33759157 |
tagtaatgctagaagttccaaatagtatagttagttgttcaggtttaacttgttaaagtattgaatacaaggcagtgttgtcaagtagcggcaataaaaa |
33759256 |
T |
|
| Q |
101 |
caatattgcaccgtagtactgtggagtttgaactaactgctttttccgtggtctggaaataacaacattgatatgaggtccctctagcacactcaactta |
200 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
33759257 |
cactattgcaccgtagtactgtggagtttgaactaactgctttttccgtggtctggaaataacaacattgatatgaggtccctctagcaaactcaactta |
33759356 |
T |
|
| Q |
201 |
ttgtttatcattggataatattctt |
225 |
Q |
| |
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||||||||||||||||||||||||| |
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| T |
33759357 |
ttgtttatcattggataatattctt |
33759381 |
T |
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