View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18406_low_104 (Length: 227)
Name: NF18406_low_104
Description: NF18406
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18406_low_104 |
 | |
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| [»] chr2 (3 HSPs) |
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| [»] chr4 (5 HSPs) |
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| [»] chr3 (7 HSPs) |
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| [»] chr7 (9 HSPs) |
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| [»] chr6 (6 HSPs) |
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| [»] scaffold0006 (1 HSPs) |
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| [»] scaffold0842 (1 HSPs) |
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| [»] chr8 (6 HSPs) |
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| [»] chr1 (5 HSPs) |
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| [»] scaffold0197 (1 HSPs) |
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| [»] scaffold0028 (1 HSPs) |
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| [»] chr5 (9 HSPs) |
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| [»] scaffold0188 (1 HSPs) |
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| [»] scaffold0078 (1 HSPs) |
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| [»] scaffold0355 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 183; Significance: 4e-99; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 10446411 - 10446637
Alignment:
| Q |
1 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
10446411 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcataagcaaggtcacttcaagaaggattgcctggataaagg |
10446510 |
T |
|
| Q |
101 |
gggcaatagtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaa |
200 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
10446511 |
gggcaatggtagtcattccgttcaagttgcggaggcaaccaatgacgatggttatgagagtgcgggtgcactagtggtcacaagttgggaaccggagaag |
10446610 |
T |
|
| Q |
201 |
agttgggttttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
10446611 |
agttgggttttggactcgggatgctct |
10446637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 227
Target Start/End: Complemental strand, 25402743 - 25402525
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||| ||||||| |||||| || |
|
|
| T |
25402743 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaggattgtccggataaggggggcgatg |
25402644 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| ||| || |||||||||||||| || ||||||| ||||||||||||||||||||||||||||| | |||||||||||| ||||| |||||||| |
|
|
| T |
25402643 |
gtagtccttcggtccaagttgcggaggcatcaaatgaagaaggttatgagagtgcgggtgcactagtggttacaagttgggaaccagagaagagttgggt |
25402544 |
T |
|
| Q |
209 |
tttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
25402543 |
tttggactcgggatgctct |
25402525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 9 - 227
Target Start/End: Complemental strand, 19348370 - 19348153
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
19348370 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataa-gggggcgatg |
19348272 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || ||||||| |||||||||||||| ||||| |||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
19348271 |
gtagtccttcggttcaagttgcggaggcttcaaatgaagaaggttatgagagtgcaggtgcgctagtggtaacaagttgggaaccggagaagagttgggt |
19348172 |
T |
|
| Q |
209 |
tttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
19348171 |
tttggactcgggatgctct |
19348153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 179; Significance: 9e-97; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 16624979 - 16625205
Alignment:
| Q |
1 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
16624979 |
gcaaggggaagtcgaggtccaagggctttgaaaaatcaaagtataaatgctttctttgtcataagcaaggtcatttcaagaaggattgcccggataaagg |
16625078 |
T |
|
| Q |
101 |
gggcaatagtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaa |
200 |
Q |
| |
|
||||||| |||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
16625079 |
gggcaatcgtagtccttccgttcaagttgcggaggcgtccaatgaagatggttctgagagtgcgggtgcactagtggttacaagttgggaaccggagaag |
16625178 |
T |
|
| Q |
201 |
agttgggttttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
16625179 |
agttgggttttggactcgggatgctct |
16625205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 15 - 227
Target Start/End: Complemental strand, 5146988 - 5146776
Alignment:
| Q |
15 |
aggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaatagtagtc |
114 |
Q |
| |
|
|||||||| ||||||||||||| ||||||||| || ||||||||||||| |||||||||||||||||||||||| ||||||||||||| || |||||| |
|
|
| T |
5146988 |
aggtccaaaggctttgacaaataaaagtataagtgttttctttgtcataagcaaggtcacttcaagaaggattgtccggataaagggggtgatggtagtc |
5146889 |
T |
|
| Q |
115 |
attccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggttttgga |
214 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||| || ||||||| |
|
|
| T |
5146888 |
cgtccgttcaagttgcggaggcatcaaatgaagatggttatgagagtgcgggtgcactagtggtcacaagttgggaactggagaagagtcggtttttgga |
5146789 |
T |
|
| Q |
215 |
ctcgggatgctct |
227 |
Q |
| |
|
||| ||||||||| |
|
|
| T |
5146788 |
ctcaggatgctct |
5146776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 9 - 227
Target Start/End: Original strand, 9225398 - 9225616
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
9225398 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgatg |
9225497 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| || ||||||||| ||||| | || ||||||| ||||||||||||| ||||||||||||||| | |||||||||||||||||| || ||||| |
|
|
| T |
9225498 |
gtagtccctcggttcaagttacggagacttcaaatgaagaaggttatgagagtgagggtgcactagtggtaacaagttgggaaccggagaagagctgggt |
9225597 |
T |
|
| Q |
209 |
tttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
9225598 |
tttggactcgggatgctct |
9225616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 18241734 - 18241801
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcactt |
76 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||| |
|
|
| T |
18241734 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcataagcaatgtcactt |
18241801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 174
Target Start/End: Original strand, 21549803 - 21549835
Alignment:
| Q |
142 |
atgaagatggttatgagagtgcgggtgcactag |
174 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |
|
|
| T |
21549803 |
atgaagatggttatgagagtgggggtgcactag |
21549835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 171; Significance: 6e-92; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 3324522 - 3324748
Alignment:
| Q |
1 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| || ||||||| |
|
|
| T |
3324522 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcataagcaaggtcacttcaagaaggattgcccgaataaagg |
3324621 |
T |
|
| Q |
101 |
gggcaatagtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaa |
200 |
Q |
| |
|
||||||| ||| || |||||| ||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
3324622 |
gggcaatggtaatccttccgtgcaagttgcgaaggcgtccaatgaagatggttatgagagggcgggtgcactagtggtcacaagttgggaaccggagaag |
3324721 |
T |
|
| Q |
201 |
agttgggttttggactcgggatgctct |
227 |
Q |
| |
|
|||||||| |||||||||||||||||| |
|
|
| T |
3324722 |
agttgggtgttggactcgggatgctct |
3324748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 10 - 227
Target Start/End: Original strand, 9602842 - 9603059
Alignment:
| Q |
10 |
agtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaatag |
109 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||| || ||||||| | |
|
|
| T |
9602842 |
agtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcataagcaaggtcacttcaagaaggattttccggatagagagggcaatgg |
9602941 |
T |
|
| Q |
110 |
tagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggtt |
209 |
Q |
| |
|
| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
9602942 |
ttgtccttccgttcaagttgcggaggcgtcaaatgaagatggttatgagagtgcgggtgcactagtggtcacaagttgggaaccggagaagagttgggtt |
9603041 |
T |
|
| Q |
210 |
ttggactcgggatgctct |
227 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
9603042 |
ttggactcgggatgctct |
9603059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 9 - 227
Target Start/End: Complemental strand, 16263456 - 16263237
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcactt-caagaaggattgctcggataaagggggcaat |
107 |
Q |
| |
|
||||| |||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||| || ||||||||||||| |||||||||||||||| |
|
|
| T |
16263456 |
aagtctaggtcccagggctttgacaaatcaaagtataaatgctttctttgtcataagcaaggtcattttcaagaaggattgccaggataaagggggcaat |
16263357 |
T |
|
| Q |
108 |
agtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttggg |
207 |
Q |
| |
|
|||||| ||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||| | |||||||||| ||||||| ||||||| |
|
|
| T |
16263356 |
ggtagtccttccgttcaagttgcggaggcttcaaatgaagatggttttgagagtgcgggtgcactagtggttacaagttgggaatcggagaagagttggg |
16263257 |
T |
|
| Q |
208 |
ttttggactcgggatgctct |
227 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
16263256 |
ttttggactcgggatgctct |
16263237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 227
Target Start/End: Complemental strand, 8516187 - 8515969
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
8516187 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgatg |
8516088 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| |||| ||| |
|
|
| T |
8516087 |
gtagtccttcggttcaagttgcggaggcttcgaatgaagaaggttatgagagtgcgggtgcactagtggtaacaagttgggaaccggagaagagttaggt |
8515988 |
T |
|
| Q |
209 |
tttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
8515987 |
tttggactcgggatgctct |
8515969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 227
Target Start/End: Complemental strand, 32479433 - 32479215
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
32479433 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgatg |
32479334 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || ||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
32479333 |
gtagtccttcggttcaagttgcggaggcttcgaatgaagaaggttatgagagtgcgggtgcgctagtggtaacaagttgggaaccggagaagagttgggt |
32479234 |
T |
|
| Q |
209 |
tttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
32479233 |
tttggactcgggatgctct |
32479215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 9 - 227
Target Start/End: Original strand, 28490168 - 28490385
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| || |||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| |||| ||||||| |||||| || |
|
|
| T |
28490168 |
aagtctagatccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattttccggataa-gggggcgatg |
28490266 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| ||| ||||||||| ||||||| || ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| || || || |
|
|
| T |
28490267 |
gtagtccttcggttcaagttacggaggcttcaaatgaagagggttatgagagtgcgggtgcactagtggtaacaagttgggaaccggagaagagctgagt |
28490366 |
T |
|
| Q |
209 |
tttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
28490367 |
tttggactcgggatgctct |
28490385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 120 - 227
Target Start/End: Original strand, 2673325 - 2673432
Alignment:
| Q |
120 |
gttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggttttggactcgg |
219 |
Q |
| |
|
||||||||||||||||| || ||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
2673325 |
gttcaagttgcggaggcttcgaatgaagaaggttatgagagtgcgggtgcgctagtggtaacaagttgggaaccggagaagagttaggttttggactcgg |
2673424 |
T |
|
| Q |
220 |
gatgctct |
227 |
Q |
| |
|
|||||||| |
|
|
| T |
2673425 |
gatgctct |
2673432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 167; Significance: 1e-89; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 49090790 - 49090564
Alignment:
| Q |
1 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagg |
100 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||| ||||||| | |||| ||||| |
|
|
| T |
49090790 |
gcaatgggaagtcgaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcataagcaaggtcatttcaataaggatttcccggacaaagg |
49090691 |
T |
|
| Q |
101 |
gggcaatagtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaa |
200 |
Q |
| |
|
||| ||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
49090690 |
gggaaatggtagtccttccgttcaagttgcggaggcgtccaatgaagatggttatgagagtgcgggtgcactagtggtcacaagttgggaaccggagaag |
49090591 |
T |
|
| Q |
201 |
agttgggttttggactcgggatgctct |
227 |
Q |
| |
|
||||| ||||||||||||||||||||| |
|
|
| T |
49090590 |
agttgagttttggactcgggatgctct |
49090564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 9186131 - 9186357
Alignment:
| Q |
1 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagg |
100 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||| |||| ||||| |
|
|
| T |
9186131 |
gcaaggggcagtcgagatccaagggctttgacaaatcaaagtataaatgctttctttgtcataagcaaggtcatttcaagaaggattgcccggacaaagg |
9186230 |
T |
|
| Q |
101 |
gggcaatagtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaa |
200 |
Q |
| |
|
||||||| |||||| |||||||||||||| |||||| || ||||||| |||||||||||| |||||||||||||||| | |||||||||||||||||| |
|
|
| T |
9186231 |
gggcaatggtagtccttccgttcaagttgtggaggcttcaaatgaagaaggttatgagagtacgggtgcactagtggttacaagttgggaaccggagaag |
9186330 |
T |
|
| Q |
201 |
agttgggttttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
9186331 |
agttgggttttggactcgggatgctct |
9186357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 9 - 227
Target Start/End: Complemental strand, 21988013 - 21987795
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||| |||||||||||||||||||||||||||||| || |
|
|
| T |
21988013 |
aagtctaggtccaagggctttgacaaatcaaagtataagtattttctttgtcataagcaaggtcatttcaagaaggattgctcggataaagggggcgatg |
21987914 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||| ||| |
|
|
| T |
21987913 |
gtagtccgtccgttcaagttgcggaggcgtcaaatgaagatggttatgagagtgcgggtgcactagtggtcacaagttgggaaccagagaagagttaggt |
21987814 |
T |
|
| Q |
209 |
tttggactcgggatgctct |
227 |
Q |
| |
|
||||||||| ||||||||| |
|
|
| T |
21987813 |
tttggactcaggatgctct |
21987795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 21645138 - 21644912
Alignment:
| Q |
1 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||| ||||||| || |
|
|
| T |
21645138 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaggattgtccggataaggg |
21645039 |
T |
|
| Q |
101 |
gggcaatagtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaa |
200 |
Q |
| |
|
||| || |||||| ||| || |||||||||||||| || ||||||| ||||||||||||||||||||||||||||| | ||||||||||| |||||| |
|
|
| T |
21645038 |
cggcgatggtagtccttcggtccaagttgcggaggcttcaaatgaagaaggttatgagagtgcgggtgcactagtggttacaagttgggaactggagaag |
21644939 |
T |
|
| Q |
201 |
agttgggttttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
21644938 |
agttgggttttggactcgggatgctct |
21644912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 227
Target Start/End: Complemental strand, 16884020 - 16883802
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
16884020 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgatg |
16883921 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || ||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
16883920 |
gtagtccttcggttcaagttgcggaggcttcgaatgaagaaggttatgagagtgcgggtgcgctagtggtaacaagttgggaaccggagaagagttgggt |
16883821 |
T |
|
| Q |
209 |
tttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
16883820 |
tttggactcgggatgctct |
16883802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 227
Target Start/End: Original strand, 24262317 - 24262535
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
24262317 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgatg |
24262416 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || ||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
24262417 |
gtagtccttcggttcaagttgcggaggcttcgaatgaagaaggttatgagagtgcgggtgcgctagtggtaacaagttgggaaccggagaagagttgggt |
24262516 |
T |
|
| Q |
209 |
tttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
24262517 |
tttggactcgggatgctct |
24262535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 9 - 227
Target Start/End: Complemental strand, 12405430 - 12405212
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
12405430 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgatg |
12405331 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || ||||||| ||||||||||||| ||||||||||||||| | |||||||||||||||||| ||||| || |
|
|
| T |
12405330 |
gtagtccttcggttcaagttgcggaggcttcaaatgaagaaggttatgagagtgtgggtgcactagtggtaacaagttgggaaccggagaagagttgagt |
12405231 |
T |
|
| Q |
209 |
tttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
12405230 |
tttggactcgggatgctct |
12405212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 9 - 227
Target Start/End: Complemental strand, 18412751 - 18412533
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||| |||||||||||||| || |
|
|
| T |
18412751 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaggattgtccggataaagggggcgatg |
18412652 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| ||| || |||||||||||||| || ||||||| |||||||||||| |||||||||||||||| | ||||||| || ||||||| |||||||| |
|
|
| T |
18412651 |
gtagtccttcggtccaagttgcggaggcttcaaatgaagaaggttatgagagtacgggtgcactagtggttacaagttggaaatcggagaagagttgggt |
18412552 |
T |
|
| Q |
209 |
tttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
18412551 |
tttggactcgggatgctct |
18412533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 17 - 220
Target Start/End: Original strand, 5818188 - 5818391
Alignment:
| Q |
17 |
gtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaatagtagtcat |
116 |
Q |
| |
|
||||||||| ||||||||||| || |||| ||||||||||||| || ||| ||||||| |||||||| ||| |||||||||| | || || | |
|
|
| T |
5818188 |
gtccaaggggcttgacaaatcattgttacaatgctttctttgtcataagcccggtgacttcaacaaggattgtctggacaaagggggcagtggtggttct |
5818287 |
T |
|
| Q |
117 |
tccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggttttggact |
216 |
Q |
| |
|
||||||||| || || | |||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| || ||||||||||||| |
|
|
| T |
5818288 |
tccgttcaaactgtggtgacgtctaatgaagatggttatgagagtgcgggtgcattagtggtcacaagttgggaaccggagaagaggtgggttttggact |
5818387 |
T |
|
| Q |
217 |
cggg |
220 |
Q |
| |
|
|||| |
|
|
| T |
5818388 |
cggg |
5818391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 159; Significance: 8e-85; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 9 - 227
Target Start/End: Complemental strand, 29485667 - 29485449
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||| ||| ||||||||||||| |
|
|
| T |
29485667 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcataagcaaggtcatttcaagaaggattgcccggctaaagggggcaatg |
29485568 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| ||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
29485567 |
gtagtccatccgttcaagttgcggaggtgtccaatgaagattgttatgagagtgcgggtgcactagtggttacaagttgggaaccggagaagagttgggt |
29485468 |
T |
|
| Q |
209 |
tttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
29485467 |
tttggactcgggatgctct |
29485449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 227
Target Start/End: Original strand, 14738566 - 14738784
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
14738566 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgatg |
14738665 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| || ||||| |
|
|
| T |
14738666 |
gtagtccttcggttcaagttgcggaggcttcaaatgaagaaggttatgagagtgcgggtgcactagtggtaacaagttgggaaccggagaagagctgggt |
14738765 |
T |
|
| Q |
209 |
tttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
14738766 |
tttggactcgggatgctct |
14738784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 9 - 227
Target Start/End: Original strand, 24432315 - 24432533
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||||||||||| ||||||||||| | ||| |||||||||||||||||| | |||||| |||||||||| |
|
|
| T |
24432315 |
aagtctaggtccaagggttttgacaaatcaaagtataaatgctttctttgtcacaaacaatgtcacttcaagaaggattacccggatagagggggcaatg |
24432414 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
||||| ||||||||||||||||| ||| || ||||||||| ||||||||||| ||||||||||| |||||||||||||||||| ||||| |||||||| |
|
|
| T |
24432415 |
ctagtccttccgttcaagttgcggtggcatctgatgaagatgtttatgagagtgtgggtgcactagcggtcataagttgggaaccagagaagagttgggt |
24432514 |
T |
|
| Q |
209 |
tttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
24432515 |
tttggactcgggatgctct |
24432533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 65 - 227
Target Start/End: Original strand, 33332126 - 33332288
Alignment:
| Q |
65 |
gcaaggtcacttcaagaaggattgctcggataaagggggcaatagtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcg |
164 |
Q |
| |
|
||||||||| |||||||| ||||| ||||||| |||||| | ||| ||| || ||||||||||||||||| || ||||||| ||||||||||||||| |
|
|
| T |
33332126 |
gcaaggtcatttcaagaaagattgtccggataaggggggcgaaagtggtccctcggttcaagttgcggaggcttcaaatgaagaaggttatgagagtgcg |
33332225 |
T |
|
| Q |
165 |
ggtgcactagtggtcataagttgggaaccggagaaaagttgggttttggactcgggatgctct |
227 |
Q |
| |
|
||||| |||||||| | |||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
33332226 |
ggtgcgctagtggtaacaagttgggaaccggagaagagttgggttttggactcgggatgctct |
33332288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 227
Target Start/End: Complemental strand, 24078012 - 24077805
Alignment:
| Q |
20 |
caagggctttgacaaatcaaagtataaatgatttc-tttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaatagtagtcattc |
118 |
Q |
| |
|
|||||| ||||| |||||||||||| || ||||| ||||||||| || |||||||||||||||||||| | || || || || ||| ||||| ||| |
|
|
| T |
24078012 |
caaggggtttgataaatcaaagtatcgat-atttcatttgtcataaacatggtcacttcaagaaggattgtcctgacaagggaggaaatggtagttcttc |
24077914 |
T |
|
| Q |
119 |
cgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggttttggactcg |
218 |
Q |
| |
|
||| ||||||| ||||||| ||||||||||||||||||||||||||||| ||| | ||| |||||||||| | ||||| |||||||| |||||||| |
|
|
| T |
24077913 |
tgtttaagttgcaatggcgtccgatgaagatggttatgagagtgcgggtgcattagcgatcacaagttgggaatcagagaagagttgggtcttggactca |
24077814 |
T |
|
| Q |
219 |
ggatgctct |
227 |
Q |
| |
|
|| |||||| |
|
|
| T |
24077813 |
gggtgctct |
24077805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 33331440 - 33331492
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtca |
61 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
33331440 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtca |
33331492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 9 - 227
Target Start/End: Complemental strand, 1600 - 1382
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| |||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||| | || |||||||||||||| |
|
|
| T |
1600 |
aagtctaggtcccagggctttgacaaatcaaagtataaatgctttctttgtcataagcaaggtcacttaaagaaggatttcccgaataaagggggcaatg |
1501 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| |||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |
|
|
| T |
1500 |
gtagtccttccgttcaagttgttgtggcgtccgatgaagatggttatgagagtgcgggtgcactagtggtcacaagttgggaaccggagaagagttgggt |
1401 |
T |
|
| Q |
209 |
tttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
1400 |
tttggactcgggatgctct |
1382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0842 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: scaffold0842
Description:
Target: scaffold0842; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 9 - 227
Target Start/End: Original strand, 4188 - 4406
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
4188 |
aagtctaggtccaagagctttgacaaatcaaagtataaatgctttctttgtcataagcaaggtcatttcaagaaggattgcccggataaagggggcaatg |
4287 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| |||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||| | ||||||| || ||||||| |||||||| |
|
|
| T |
4288 |
gtagtccttccgttcaatttgcagaggcgtcaaatgaagatggttatgagagtgcgggtgcactagtggttacaagttggaaatcggagaagagttgggt |
4387 |
T |
|
| Q |
209 |
tttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
4388 |
tttggactcgggatgctct |
4406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 151; Significance: 5e-80; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 26300451 - 26300225
Alignment:
| Q |
1 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
26300451 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaggattgttcggataaagg |
26300352 |
T |
|
| Q |
101 |
gggcaatagtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaa |
200 |
Q |
| |
|
|||| || |||||| ||| || |||||||||||||| || |||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
26300351 |
gggcgatggtagtccttcggtccaagttgcggaggcttcaagtgaagaaggttatgagagtgcgggtgcactagtggttacaagttgggaaccggagaag |
26300252 |
T |
|
| Q |
201 |
agttgggttttggactcgggatgctct |
227 |
Q |
| |
|
|||||||||||||||| |||||||||| |
|
|
| T |
26300251 |
agttgggttttggacttgggatgctct |
26300225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 18856261 - 18856487
Alignment:
| Q |
1 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| || |
|
|
| T |
18856261 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggg |
18856360 |
T |
|
| Q |
101 |
gggcaatagtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaa |
200 |
Q |
| |
|
|||| || |||||| ||| || |||||||||||||| || ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
18856361 |
gggcgatggtagtccttcggtccaagttgcggaggcttcaaatgaagaaggttatgagagtgcgggtgcactagtggttacaagttgggaaccggagaag |
18856460 |
T |
|
| Q |
201 |
agttgggttttggactcgggatgctct |
227 |
Q |
| |
|
|| |||||||||||||||||||||||| |
|
|
| T |
18856461 |
agctgggttttggactcgggatgctct |
18856487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 227
Target Start/End: Original strand, 23800511 - 23800730
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagg-gggcaat |
107 |
Q |
| |
|
||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
23800511 |
aagtctaggtccaagggcttttacaaatcaaagtataaatgctttctttgtcataagcaaggccacttcaagaaggattgcctggataaaggagggcaat |
23800610 |
T |
|
| Q |
108 |
agtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttggg |
207 |
Q |
| |
|
|||||| ||||||||||||||| | || |||| || || ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
23800611 |
ggtagtccttccgttcaagttgcagtggtgtccgattaacatggttatgagagtgcgggtgcactagtggtcacaagttgggaaccggagaagagttggg |
23800710 |
T |
|
| Q |
208 |
ttttggactcgggatgctct |
227 |
Q |
| |
|
||||| |||||||||||||| |
|
|
| T |
23800711 |
ttttgaactcgggatgctct |
23800730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 227
Target Start/End: Original strand, 10685258 - 10685476
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
10685258 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgatg |
10685357 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || ||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
10685358 |
gtagtccttcggttcaagttgcggaggcttcgaatgaagaaggttatgagagtgcgggtgcgctagtggtaacaagttgggaaccggagaagagttgggt |
10685457 |
T |
|
| Q |
209 |
tttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
10685458 |
tttggactcgggatgctct |
10685476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 18866656 - 18866882
Alignment:
| Q |
1 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| | ||||| || |
|
|
| T |
18866656 |
gcaaggggaagtcgaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccagataaggg |
18866755 |
T |
|
| Q |
101 |
gggcaatagtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaa |
200 |
Q |
| |
|
|||| || |||||| ||| || |||||||||||||| || ||||||| |||||||||||||| |||||||||||||| | |||||||||||||||||| |
|
|
| T |
18866756 |
gggcgatggtagtccttcggtccaagttgcggaggcttcaaatgaagaaggttatgagagtgcaggtgcactagtggttacaagttgggaaccggagaag |
18866855 |
T |
|
| Q |
201 |
agttgggttttggactcgggatgctct |
227 |
Q |
| |
|
|| |||||||||||||||||||||||| |
|
|
| T |
18866856 |
agctgggttttggactcgggatgctct |
18866882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 9 - 226
Target Start/End: Complemental strand, 35744483 - 35744266
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
35744483 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgatg |
35744384 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || ||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
35744383 |
gtagtccttcggttcaagttgcggaggcttcaaatgaagaaggttatgagagtgcgggtgcgctagtggtaacaagttgggaaccggagaagagttgggt |
35744284 |
T |
|
| Q |
209 |
tttggactcgggatgctc |
226 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
35744283 |
tttggactcgggatgctc |
35744266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 147; Significance: 1e-77; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 9 - 227
Target Start/End: Original strand, 19359832 - 19360050
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||| | |||||||||||||| || |
|
|
| T |
19359832 |
aagtcaaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcattagcaaggtcatttcaagaaggatttcccggataaagggggcgatg |
19359931 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| |||||| |||||||||||||| || ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
19359932 |
gtagtccttccgtccaagttgcggaggcttcaaatgaagaaggttatgagagtgcgggtgcactagtggttacaagttgggaaccggagaagagttgggt |
19360031 |
T |
|
| Q |
209 |
tttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
19360032 |
tttggactcgggatgctct |
19360050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 9 - 215
Target Start/End: Original strand, 47099812 - 47100018
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
47099812 |
aagtctaggtccaaggggtttgacaaatcaaagtataaatgctttctttgtcataagcaaggtcacttcaagaaggattacccggataaagggggcaatg |
47099911 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| |||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||| || |
|
|
| T |
47099912 |
gtagtccttccgttcaagttgtggaggcttccaatgaagatggttatgagagtgcgggtgcactagtggttacaagttgggaaccggagaagagttgagt |
47100011 |
T |
|
| Q |
209 |
tttggac |
215 |
Q |
| |
|
||||||| |
|
|
| T |
47100012 |
tttggac |
47100018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 9 - 227
Target Start/End: Complemental strand, 41397332 - 41397114
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| | |
|
|
| T |
41397332 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgacg |
41397233 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || || |||| ||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
41397232 |
gtagtccttcggttcaagttgcggaggcttcaaataaagaaggttatgagagtgcgggtgcactagtggtaacaagttgggaaccggagaagagttgggt |
41397133 |
T |
|
| Q |
209 |
tttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
41397132 |
tttggactcgggatgctct |
41397114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 51 - 227
Target Start/End: Original strand, 17346550 - 17346725
Alignment:
| Q |
51 |
tttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaatagtagtcattccgttcaagttgcggaggcgtcctatgaagatg |
150 |
Q |
| |
|
||||||||||| | || | |||||||||||||||||| || | ||||||||||| || || |||| ||||||||| || ||||| ||||||||| |
|
|
| T |
17346550 |
tttctttgtcaaaagcccgatcacttcaagaaggattgttc-aaacaagggggcaatggtggttcttccattcaagttgtggtggcgtttgatgaagatg |
17346648 |
T |
|
| Q |
151 |
gttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggttttggactcgggatgctct |
227 |
Q |
| |
|
||||| |||||| ||||||| ||||||||| |||||||||||| ||||| |||| ||||||||| ||||| |||||| |
|
|
| T |
17346649 |
gttattagagtgtgggtgcattagtggtcacaagttgggaaccagagaagagttaggttttggagtcggggtgctct |
17346725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 215
Target Start/End: Original strand, 9024878 - 9024998
Alignment:
| Q |
93 |
gataaagggggcaatagtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaac |
192 |
Q |
| |
|
||||||||||||||| || || ||||||||||||||||| || |||| |||||||||| ||| | |||||||||||||||||||| ||||| | | |
|
|
| T |
9024878 |
gataaagggggcaatggtggttcttccgttcaagttgcggtggagtccgatgaagatggatat--gtctgcgggtgcactagtggtcacaagttcgaagt |
9024975 |
T |
|
| Q |
193 |
cggagaaaagttgggttttggac |
215 |
Q |
| |
|
||||||| ||||||||||||||| |
|
|
| T |
9024976 |
cggagaagagttgggttttggac |
9024998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0197 (Bit Score: 139; Significance: 7e-73; HSPs: 1)
Name: scaffold0197
Description:
Target: scaffold0197; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 9 - 227
Target Start/End: Original strand, 15303 - 15521
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
15303 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgatg |
15402 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
15403 |
gtagtccttcggttcaagttgcggaggcttcaaatgaagaaggttatgagagtgcgggtgcactagtggtaacaagttgggaaccggagaagagttgggt |
15502 |
T |
|
| Q |
209 |
tttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
15503 |
tttggactcgggatgctct |
15521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0028
Description:
Target: scaffold0028; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 227
Target Start/End: Original strand, 149949 - 150167
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
149949 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgatg |
150048 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || ||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
150049 |
gtagtccttcggttcaagttgcggaggcttcgaatgaagaaggttatgagagtgcgggtgcgctagtggtaacaagttgggaaccggagaagagttgggt |
150148 |
T |
|
| Q |
209 |
tttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
150149 |
tttggactcgggatgctct |
150167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 135; Significance: 2e-70; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 227
Target Start/End: Original strand, 31397986 - 31398204
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
31397986 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgatg |
31398085 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || ||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
31398086 |
gtagtccttcagttcaagttgcggaggcttcgaatgaagaaggttatgagagtgcgggtgcgctagtggtaacaagttgggaaccggagaagagttgggt |
31398185 |
T |
|
| Q |
209 |
tttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
31398186 |
tttggactcgggatgctct |
31398204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 227
Target Start/End: Complemental strand, 33790408 - 33790190
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
33790408 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgatg |
33790309 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || ||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
33790308 |
gtagtccttcggttcaagttgcggaggcttcaaatgaagaaggttatgagagtgcgggtgcgctagtggtaacaagttgggaaccggagaagagttgggt |
33790209 |
T |
|
| Q |
209 |
tttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
33790208 |
tttggactcgggatgctct |
33790190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 9 - 227
Target Start/End: Complemental strand, 27448915 - 27448697
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| || |
|
|
| T |
27448915 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgatg |
27448816 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| ||| |||||||||| |||||| || ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| || ||||| |
|
|
| T |
27448815 |
gtagtccttcggttcaagttgtggaggcttcaaatgaagaaggttatgagagtgcgggtgcactagtggtaacaagttgggaaccggagaagagctgggt |
27448716 |
T |
|
| Q |
209 |
tttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
27448715 |
tttggactcgggatgctct |
27448697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 24556579 - 24556792
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| ||||||||| | ||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
24556579 |
aagtctaggtccaagagttttgacaaatcaaagtataaatgctttctttgtctcaaacaaggtcacttcaagaaggattgcctggataaatggggcaatg |
24556678 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||| |||||||||||||||||| || ||||||||||||||||| |||||||||||| ||||| |||||||| |
|
|
| T |
24556679 |
gtagtccttccgttcaagttgcggtggcgtccgatgaagatggttatgaga-tgtgggtgcactagtggtcacaagttgggaaccagagaagagttgggt |
24556777 |
T |
|
| Q |
209 |
tttggactcgggatg |
223 |
Q |
| |
|
|||||||| |||||| |
|
|
| T |
24556778 |
tttggacttgggatg |
24556792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 24597611 - 24597824
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| ||||||||| | ||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
24597611 |
aagtctaggtccaagagttttgacaaatcaaagtataaatgctttctttgtctcaaacaaggtcacttcaagaaggattgcctggataaatggggcaatg |
24597710 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||| |||||||||||||||||| || ||||||||||||||||| |||||||||||| ||||| |||||||| |
|
|
| T |
24597711 |
gtagtccttccgttcaagttgcggtggcgtccgatgaagatggttatgaga-tgtgggtgcactagtggtcacaagttgggaaccagagaagagttgggt |
24597809 |
T |
|
| Q |
209 |
tttggactcgggatg |
223 |
Q |
| |
|
|||||||| |||||| |
|
|
| T |
24597810 |
tttggacttgggatg |
24597824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 9 - 227
Target Start/End: Complemental strand, 43596214 - 43595996
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| ||||| || |
|
|
| T |
43596214 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataagaggggcgatg |
43596115 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| ||| |||||||||| |||||| || ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| || ||||| |
|
|
| T |
43596114 |
gtagtccttcggttcaagttgtggaggcttcaaatgaagaaggttatgagagtgcgggtgcactagtggtaacaagttgggaaccggagaagagctgggt |
43596015 |
T |
|
| Q |
209 |
tttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
43596014 |
tttggactcgggatgctct |
43595996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 9 - 227
Target Start/End: Complemental strand, 43629008 - 43628790
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| ||||| || |
|
|
| T |
43629008 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataagaggggcgatg |
43628909 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| ||| |||||||||| |||||| || ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| || ||||| |
|
|
| T |
43628908 |
gtagtccttcggttcaagttgtggaggcttcaaatgaagaaggttatgagagtgcgggtgcactagtggtaacaagttgggaaccggagaagagctgggt |
43628809 |
T |
|
| Q |
209 |
tttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
43628808 |
tttggactcgggatgctct |
43628790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 9 - 227
Target Start/End: Original strand, 37557618 - 37557836
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| | |
|
|
| T |
37557618 |
aagtctaggtccaagggctttgacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggcgaag |
37557717 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|| ||| || ||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||| | |||||||||||| ||||| |||||||| |
|
|
| T |
37557718 |
gtggtccctcggttcaagttgcggaggcttcaaatgaagaaggttatgagagtgcgggtgcactagtggtaacaagttgggaaccagagaagagttgggt |
37557817 |
T |
|
| Q |
209 |
tttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
37557818 |
tttggactcgggatgctct |
37557836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 227
Target Start/End: Complemental strand, 34841619 - 34841491
Alignment:
| Q |
99 |
gggggcaatagtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggaga |
198 |
Q |
| |
|
||||||||| ||||| ||| ||||||||||| | | | ||| ||||||||||||| |||||||| |||||||||| ||||| || |||| |||| | | |
|
|
| T |
34841619 |
gggggcaatggtagttcttcggttcaagttgcagtgacttccgatgaagatggttaggagagtgcaggtgcactagcggtcacaaattggaaaccaaaaa |
34841520 |
T |
|
| Q |
199 |
aaagttgggttttggactcgggatgctct |
227 |
Q |
| |
|
| |||| ||| ||||||| ||| |||||| |
|
|
| T |
34841519 |
atagttaggtcttggacttgggttgctct |
34841491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0188 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: scaffold0188
Description:
Target: scaffold0188; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 9 - 227
Target Start/End: Original strand, 18933 - 19151
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggcaata |
108 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||||||||||| ||||||||||| | ||||||| | || ||||||||||| ||||||| |||||| || |
|
|
| T |
18933 |
aagtctaggtccaagggatttgacaaatcaaagtataaatgctttctttgtcacaagcaaggttattttaagaaggattgtccggataaggggggcgatg |
19032 |
T |
|
| Q |
109 |
gtagtcattccgttcaagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggt |
208 |
Q |
| |
|
|||||| ||| || ||||||||| |||| || ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| || | ||| |
|
|
| T |
19033 |
gtagtccttcggtccaagttgcgaaggcttcaaatgaagaaggttatgagagtgcgggtgcactagtggttacaagttgggaaccggagaagagataggt |
19132 |
T |
|
| Q |
209 |
tttggactcgggatgctct |
227 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
19133 |
tttggactcgggatgctct |
19151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0078 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0078
Description:
Target: scaffold0078; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 35989 - 35885
Alignment:
| Q |
123 |
caagttgcggaggcgtcctatgaagatggttatgagagtgcgggtgcactagtggtcataagttgggaaccggagaaaagttgggttttggactcgggat |
222 |
Q |
| |
|
|||||||||| ||| ||| ||||||||||||||| |||| |||||||||||||| | |||||| |||| ||||| |||||||||||||||||||| | |
|
|
| T |
35989 |
caagttgcggtggcctccggtgaagatggttatgaaagtgtcggtgcactagtggttacaagttgagaactagagaagagttgggttttggactcggggt |
35890 |
T |
|
| Q |
223 |
gctct |
227 |
Q |
| |
|
||||| |
|
|
| T |
35889 |
gctct |
35885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0355 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0355
Description:
Target: scaffold0355; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 871 - 966
Alignment:
| Q |
9 |
aagtcgaggtccaagggctttgacaaatcaaagtataaatgatttctttgtcatatgcaaggtcacttcaagaaggattgctcggataaagggggc |
104 |
Q |
| |
|
||||| || |||||||| ||| ||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||| |||||| |
|
|
| T |
871 |
aagtctagatccaagggatttaacaaatcaaagtataaatgctttctttgtcacaagcaaggtcatttcaagaaagattgtccggataaggggggc |
966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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