View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18406_low_64 (Length: 300)
Name: NF18406_low_64
Description: NF18406
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18406_low_64 |
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Alignment Details
Target: chr3 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 18 - 287
Target Start/End: Original strand, 32266755 - 32267024
Alignment:
| Q |
18 |
taattatggtagctattagcgacgcgcttggtttacattttgttataggacctattctttttggtttggcaatgcctaatggacctcccttggcaacaac |
117 |
Q |
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| T |
32266755 |
taattatggtagctattagcgacgcgcttggtttacattttgttataggacctattctttttggtttggcaatgcctaatggacctcccttggcaacaac |
32266854 |
T |
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| Q |
118 |
gatagtagagaaaagtgaactaatcgtccaagaattgcttatgccatttttcttctcatacattggcataacaacaaatttaaaaggaattgccaaaaat |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32266855 |
aatagtagagaaaagtgaactaatcgtccaagaattgcttatgccatttttcttctcatacattggcataacaacaaatttaaaaggaattgccaaaaat |
32266954 |
T |
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| Q |
218 |
tggaaggtggtgtttgtatttcagagtatcttatttgttgggttcttggcaaaggttcttgcatgcgtct |
287 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32266955 |
tggaaggtggtatttgtatttcagagtatcttatttgttgggttcttggcaaaggttcttgcatgcgtct |
32267024 |
T |
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