View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18406_low_74 (Length: 273)
Name: NF18406_low_74
Description: NF18406
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18406_low_74 |
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Alignment Details
Target: chr2 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 37662426 - 37662688
Alignment:
| Q |
1 |
ttcttggacctttttcttctttgcaacgtgaagttttacaaggtggttctgatttcattcgttcaccaacttgtccttcattcaagacaaattcaacata |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |
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| T |
37662426 |
ttcttggacctttttcttctttgcaacgtgaagttttacaaggtggttctgatttcattcgttcaccaacttgtccttcattcaaaaccaattcaacata |
37662525 |
T |
|
| Q |
101 |
tgaagttggtgatttcaagaactttgttgaatggaacaaggttgttcagttacttggttcaaaagggtattcttcattttcaactgcattgcattctgtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37662526 |
tgaagttggtgatttcaagaactttgttgaatggaacaaggttgttcagttacttggttcaaaagggtattcttcattttcaactgcattgcattctgtt |
37662625 |
T |
|
| Q |
201 |
cttgaagggattctgaaagattcatcaagttttggttatggttctgctacaatctctgctcct |
263 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
37662626 |
ctcgaagggattctgaaagattcatcaagttttggttatggttctgctacaatctttgctcct |
37662688 |
T |
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