View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18406_low_83 (Length: 244)
Name: NF18406_low_83
Description: NF18406
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18406_low_83 |
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Alignment Details
Target: chr6 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 33758889 - 33759056
Alignment:
| Q |
1 |
ctatcttatgatcactgattcatttgttgttgctgttgttacgtgaacactccaatacctggagttttgttggatacataccaactcccaatcatttaat |
100 |
Q |
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| T |
33758889 |
ctatcttatgatcactgattcatttgttgttgctgttgttacgtgaacactccaatacctggagttttgttggatacataccaactcccaatcatttaat |
33758988 |
T |
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| Q |
101 |
ctcatgtcattttcttgtatttaactaatttgaaatgaatttgatttttgaatgaaaattctttaaag |
168 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33758989 |
ctcatgtcattttcttgtatttaactaatttgaaatgaatttgatttttgaatgaaaattctttaaag |
33759056 |
T |
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