View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18409_low_7 (Length: 332)

Name: NF18409_low_7
Description: NF18409
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18409_low_7
NF18409_low_7
[»] chr5 (35 HSPs)
chr5 (170-328)||(38484149-38484317)
chr5 (83-162)||(27340974-27341053)
chr5 (83-161)||(33743221-33743299)
chr5 (83-160)||(3722965-3723042)
chr5 (84-161)||(18638729-18638806)
chr5 (83-162)||(34952292-34952371)
chr5 (83-161)||(33567127-33567205)
chr5 (83-154)||(21062887-21062958)
chr5 (83-161)||(30301315-30301393)
chr5 (83-159)||(39840593-39840669)
chr5 (83-162)||(4878161-4878240)
chr5 (83-161)||(16292138-16292216)
chr5 (174-221)||(38496122-38496169)
chr5 (83-162)||(42825219-42825298)
chr5 (84-162)||(12878841-12878919)
chr5 (84-160)||(36415951-36416027)
chr5 (86-160)||(8725307-8725379)
chr5 (83-162)||(20125495-20125574)
chr5 (84-159)||(32425058-32425133)
chr5 (83-126)||(42807413-42807456)
chr5 (83-161)||(14914475-14914553)
chr5 (83-160)||(39595379-39595456)
chr5 (83-159)||(125197-125273)
chr5 (83-162)||(40566103-40566183)
chr5 (90-160)||(3141608-3141678)
chr5 (84-159)||(15290911-15290986)
chr5 (83-161)||(17489453-17489532)
chr5 (84-161)||(285332-285409)
chr5 (83-160)||(36624423-36624500)
chr5 (83-160)||(39191723-39191800)
chr5 (84-160)||(3155108-3155184)
chr5 (112-156)||(8787049-8787093)
chr5 (90-162)||(11306808-11306880)
chr5 (107-159)||(12349914-12349966)
chr5 (93-161)||(20591362-20591430)
[»] chr3 (33 HSPs)
chr3 (83-159)||(47509037-47509113)
chr3 (87-160)||(43176304-43176377)
chr3 (84-161)||(22153970-22154047)
chr3 (83-161)||(11233919-11233997)
chr3 (83-160)||(44334690-44334767)
chr3 (83-162)||(622346-622425)
chr3 (83-162)||(7231893-7231972)
chr3 (83-161)||(23920402-23920480)
chr3 (83-161)||(35425560-35425638)
chr3 (83-161)||(42424336-42424414)
chr3 (83-162)||(2812386-2812465)
chr3 (85-152)||(37323774-37323841)
chr3 (84-162)||(18713709-18713787)
chr3 (84-162)||(40159713-40159791)
chr3 (83-161)||(46473233-46473311)
chr3 (83-160)||(28300535-28300612)
chr3 (84-161)||(51032514-51032591)
chr3 (83-159)||(26668945-26669021)
chr3 (83-156)||(53133841-53133914)
chr3 (83-159)||(12094280-12094356)
chr3 (90-162)||(48178942-48179014)
chr3 (124-162)||(3484891-3484929)
chr3 (83-161)||(11173555-11173633)
chr3 (90-160)||(29706015-29706085)
chr3 (99-161)||(42104537-42104599)
chr3 (83-161)||(46092847-46092925)
chr3 (116-162)||(46953087-46953133)
chr3 (124-161)||(24748733-24748770)
chr3 (124-161)||(28300420-28300457)
chr3 (93-161)||(31997917-31997986)
chr3 (84-160)||(11335191-11335267)
chr3 (83-162)||(23906873-23906953)
chr3 (90-161)||(55344183-55344255)
[»] chr6 (18 HSPs)
chr6 (83-161)||(7693420-7693498)
chr6 (83-161)||(2333480-2333558)
chr6 (83-162)||(3821509-3821588)
chr6 (83-162)||(30622129-30622208)
chr6 (83-161)||(14569272-14569350)
chr6 (84-162)||(19788963-19789041)
chr6 (84-162)||(28647322-28647400)
chr6 (83-160)||(6158669-6158746)
chr6 (83-155)||(26860509-26860581)
chr6 (83-154)||(9200215-9200286)
chr6 (89-160)||(30733120-30733191)
chr6 (90-161)||(30906551-30906622)
chr6 (83-161)||(23633213-23633291)
chr6 (95-161)||(27102217-27102283)
chr6 (95-161)||(27144039-27144105)
chr6 (83-160)||(18792321-18792398)
chr6 (84-160)||(27176063-27176139)
chr6 (90-161)||(32253892-32253964)
[»] chr2 (20 HSPs)
chr2 (83-162)||(42665699-42665778)
chr2 (83-160)||(11442777-11442854)
chr2 (83-162)||(546272-546351)
chr2 (83-160)||(36909732-36909809)
chr2 (83-162)||(42554881-42554958)
chr2 (83-161)||(7497879-7497957)
chr2 (83-160)||(10389324-10389401)
chr2 (90-162)||(19913896-19913969)
chr2 (83-154)||(40496455-40496526)
chr2 (83-161)||(3091846-3091924)
chr2 (83-161)||(38912489-38912567)
chr2 (99-160)||(2308213-2308274)
chr2 (84-161)||(4723672-4723749)
chr2 (125-162)||(34261911-34261948)
chr2 (83-160)||(35965687-35965764)
chr2 (83-159)||(6666125-6666201)
chr2 (83-162)||(10550345-10550425)
chr2 (90-162)||(11164263-11164335)
chr2 (84-160)||(43057552-43057628)
chr2 (89-161)||(43650435-43650507)
[»] chr4 (38 HSPs)
chr4 (84-162)||(41154134-41154212)
chr4 (83-162)||(10096629-10096708)
chr4 (83-157)||(17363335-17363409)
chr4 (83-160)||(5234360-5234437)
chr4 (83-162)||(31275251-31275330)
chr4 (83-160)||(34114006-34114083)
chr4 (84-160)||(45274369-45274445)
chr4 (83-162)||(4514152-4514231)
chr4 (83-162)||(11012230-11012309)
chr4 (98-161)||(42882575-42882638)
chr4 (83-160)||(29525963-29526040)
chr4 (94-162)||(8906351-8906419)
chr4 (90-162)||(30778151-30778223)
chr4 (83-131)||(39067873-39067921)
chr4 (90-161)||(29406925-29406996)
chr4 (83-162)||(35332809-35332888)
chr4 (84-159)||(51540737-51540812)
chr4 (83-160)||(2193697-2193775)
chr4 (83-161)||(11063977-11064055)
chr4 (84-162)||(32713952-32714030)
chr4 (86-156)||(42516742-42516812)
chr4 (84-161)||(4489687-4489764)
chr4 (83-131)||(31147336-31147384)
chr4 (83-157)||(25139848-25139923)
chr4 (83-160)||(40335882-40335956)
chr4 (90-161)||(42915107-42915178)
chr4 (83-161)||(13267366-13267444)
chr4 (83-160)||(20056487-20056565)
chr4 (84-158)||(39880921-39880995)
chr4 (84-162)||(53356964-53357042)
chr4 (116-160)||(19720529-19720574)
chr4 (86-131)||(41678804-41678849)
chr4 (99-160)||(50159055-50159116)
chr4 (97-162)||(51389435-51389500)
chr4 (85-161)||(1688316-1688392)
chr4 (90-161)||(31240760-31240832)
chr4 (83-162)||(32901434-32901514)
chr4 (83-131)||(40308538-40308586)
[»] chr1 (36 HSPs)
chr1 (83-161)||(30530287-30530365)
chr1 (84-162)||(8464400-8464478)
chr1 (83-150)||(42792388-42792455)
chr1 (83-162)||(50884657-50884736)
chr1 (83-160)||(34002209-34002286)
chr1 (116-160)||(21154361-21154405)
chr1 (83-159)||(52369001-52369077)
chr1 (83-161)||(24775080-24775158)
chr1 (83-161)||(33422107-33422185)
chr1 (83-161)||(33669711-33669789)
chr1 (83-161)||(44112559-44112637)
chr1 (83-161)||(49596346-49596424)
chr1 (83-161)||(50017311-50017389)
chr1 (83-161)||(52417636-52417714)
chr1 (83-160)||(51250180-51250257)
chr1 (83-161)||(4511665-4511743)
chr1 (83-161)||(5315316-5315394)
chr1 (84-161)||(44641791-44641868)
chr1 (83-155)||(5975642-5975714)
chr1 (83-161)||(24611949-24612027)
chr1 (84-161)||(11570251-11570328)
chr1 (83-156)||(15059729-15059802)
chr1 (111-156)||(44503547-44503592)
chr1 (109-161)||(39220326-39220378)
chr1 (90-156)||(7503577-7503644)
chr1 (91-161)||(15061958-15062029)
chr1 (84-162)||(24910021-24910099)
chr1 (83-161)||(45470727-45470805)
chr1 (83-161)||(48576393-48576471)
chr1 (91-160)||(51193021-51193091)
chr1 (83-160)||(4154687-4154764)
chr1 (116-160)||(26547372-26547417)
chr1 (116-160)||(33660182-33660227)
chr1 (83-152)||(40139218-40139287)
chr1 (134-162)||(9362916-9362944)
chr1 (89-161)||(49589860-49589932)
[»] chr8 (30 HSPs)
chr8 (88-161)||(34996248-34996321)
chr8 (83-161)||(27631052-27631130)
chr8 (83-149)||(5642290-5642356)
chr8 (83-149)||(5644231-5644297)
chr8 (83-161)||(11155770-11155848)
chr8 (83-154)||(323975-324046)
chr8 (83-162)||(7129638-7129717)
chr8 (83-162)||(41304869-41304948)
chr8 (83-160)||(8074614-8074691)
chr8 (84-160)||(9550312-9550388)
chr8 (87-161)||(35594653-35594721)
chr8 (83-161)||(10653671-10653749)
chr8 (83-161)||(29910100-29910178)
chr8 (83-161)||(40413251-40413329)
chr8 (83-161)||(42026477-42026555)
chr8 (84-160)||(5924916-5924993)
chr8 (84-161)||(27776267-27776344)
chr8 (90-162)||(21273597-21273669)
chr8 (84-160)||(40719533-40719609)
chr8 (84-162)||(10344434-10344513)
chr8 (83-161)||(154395-154473)
chr8 (83-161)||(23258137-23258215)
chr8 (84-162)||(39153571-39153649)
chr8 (83-160)||(5359443-5359520)
chr8 (116-160)||(5925193-5925238)
chr8 (90-161)||(30925542-30925613)
chr8 (84-160)||(35819043-35819119)
chr8 (83-158)||(37562031-37562107)
chr8 (83-131)||(42658741-42658789)
chr8 (91-162)||(45101509-45101580)
[»] chr7 (27 HSPs)
chr7 (83-160)||(30391251-30391328)
chr7 (83-162)||(17500802-17500881)
chr7 (83-162)||(17552333-17552412)
chr7 (83-159)||(5724143-5724219)
chr7 (83-161)||(36186782-36186860)
chr7 (83-160)||(47644814-47644891)
chr7 (84-162)||(21153158-21153236)
chr7 (84-161)||(31436523-31436599)
chr7 (83-162)||(10014841-10014921)
chr7 (84-160)||(49089053-49089129)
chr7 (83-162)||(27070556-27070635)
chr7 (83-162)||(27207678-27207757)
chr7 (83-161)||(37351878-37351956)
chr7 (83-160)||(12141989-12142066)
chr7 (83-154)||(24267542-24267613)
chr7 (83-160)||(5978684-5978761)
chr7 (84-161)||(36920891-36920968)
chr7 (89-161)||(43445518-43445590)
chr7 (83-131)||(44196131-44196179)
chr7 (90-157)||(47424877-47424944)
chr7 (84-154)||(27075574-27075644)
chr7 (84-154)||(27202667-27202737)
chr7 (107-161)||(27330915-27330969)
chr7 (83-161)||(46651777-46651855)
chr7 (83-160)||(31009529-31009606)
chr7 (84-160)||(18067814-18067890)
chr7 (84-160)||(33212132-33212208)
[»] scaffold0072 (1 HSPs)
scaffold0072 (83-161)||(14437-14515)
[»] scaffold0020 (1 HSPs)
scaffold0020 (83-161)||(156011-156089)
[»] scaffold0154 (1 HSPs)
scaffold0154 (89-157)||(4425-4493)
[»] scaffold0024 (1 HSPs)
scaffold0024 (84-156)||(92054-92126)
[»] scaffold0057 (1 HSPs)
scaffold0057 (83-154)||(21469-21540)
[»] scaffold0036 (1 HSPs)
scaffold0036 (90-161)||(18116-18186)
[»] scaffold0194 (1 HSPs)
scaffold0194 (83-157)||(29702-29776)
[»] scaffold0238 (1 HSPs)
scaffold0238 (87-161)||(16500-16574)
[»] scaffold0014 (1 HSPs)
scaffold0014 (83-117)||(199371-199405)
[»] scaffold0511 (1 HSPs)
scaffold0511 (83-160)||(11743-11820)
[»] scaffold0111 (1 HSPs)
scaffold0111 (83-160)||(36757-36834)
[»] scaffold0018 (1 HSPs)
scaffold0018 (124-161)||(36148-36185)
[»] scaffold0204 (1 HSPs)
scaffold0204 (90-161)||(27451-27523)


Alignment Details
Target: chr5 (Bit Score: 66; Significance: 4e-29; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 170 - 328
Target Start/End: Complemental strand, 38484317 - 38484149
Alignment:
Q  170 atatgtacaataataaaagttgaaacattataaaagaaaagaagtttgttttgagaggnnnnnnnnnnttaaaacaaagtactgtataacaatatga--- 266  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||          ||||||||||||| |||||||||||||||       
T  38484317 atatgtacaataataaaagttgaaacattataaaagaaaaaaagtttgttttaagagg--aaaaaaagttaaaacaaagtattgtataacaatatgacaa 38484220  T
Q  267 ---ttt------agcattcaaaattcattaatataacaaatttgcattcgcaaaggttcaaaatgtttcat 328  Q
       |||      ||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||    
T  38484219 atctttagtgaaagcattcaaaattcattaatataacaaatttactttcgcaaaggtccaaaatgtttcat 38484149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 27340974 - 27341053
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    |||||||||||||||||||||||||||| ||| ||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  27340974 gttttggaccaataaaaagagagcaaatgaaagttgtcatcaaaattgtaccaaatgattgtacatatatcactactcta 27341053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 33743299 - 33743221
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||||||| |||| | |||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||    
T  33743299 gttttggatcaatgagaagagagcaaataaaagttgtcatcaaagttgtaccaaatgattgtacatatatcactactct 33743221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 3723042 - 3722965
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    ||||||||||||||||||||||| |||| ||| ||||||||||||||||  ||||||||||||||||||||| |||||    
T  3723042 gttttggaccaataaaaagagagaaaatgaaagttgtcatcaaagttgtcccaaatggttgtacatatatcattactc 3722965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 84 - 161
Target Start/End: Complemental strand, 18638806 - 18638729
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||||||||||||| || |||| |||||||| ||||||||||||||||  ||||||||||||||||||||||||||||    
T  18638806 ttttggaccaataagaaaagagaaaataaaagttgtcatcaaagttgtcccaaatggttgtacatatatcactactct 18638729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 34952371 - 34952292
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    ||||||||||||||| ||||||| |||||||| |||||||||||||| |  |||||  ||||||||||||||||||||||    
T  34952371 gttttggaccaataagaagagagaaaataaaagttgtcatcaaagttatcccaaataattgtacatatatcactactcta 34952292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 33567205 - 33567127
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||| ||||||| ||||||||| ||| | |||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  33567205 gtttttgaccaatgaaaagagagaaaaaagaaattgtcacaaaagttgtatcaaatggttgttcatatatcactactct 33567127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 21062887 - 21062958
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatca 154  Q
    ||||||| ||||||| || ||||||||| ||| ||||||||||| ||||| |||||||||||||||||||||    
T  21062887 gttttgggccaataagaaaagagcaaatgaaagttgtcatcaaaattgtaccaaatggttgtacatatatca 21062958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 30301315 - 30301393
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||| ||| | ||||||| |||| ||| ||||||||||||||||  || |||||||||||||||||||||||||    
T  30301315 gttttggacaaatgagaagagaggaaatgaaagttgtcatcaaagttgttacatatggttgtacatatatcactactct 30301393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 39840669 - 39840593
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactact 159  Q
    ||||||||||||| | ||||| | |||||||| |||||||||||||| |  ||||| ||||||||||||||||||||    
T  39840669 gttttggaccaatgagaagagggaaaataaaagttgtcatcaaagttatcacaaatagttgtacatatatcactact 39840593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 4878240 - 4878161
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    |||||||||||||| ||| |||| |||||||| ||||||||||||||||   | ||||||||||| ||||||| ||||||    
T  4878240 gttttggaccaatagaaatagagtaaataaaagttgtcatcaaagttgttagatatggttgtacaaatatcacaactcta 4878161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 16292216 - 16292138
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgt-atcaaatggttgtacatatatcactactct 161  Q
    ||||| ||||||||||||| ||| |||||| | ||||| |||||||||| ||||| ||||||||||||||||||||||||    
T  16292216 gtttttgaccaataaaaagcgagaaaataatagttgtcttcaaagttgtcatcaa-tggttgtacatatatcactactct 16292138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 38496169 - 38496122
Alignment:
Q  174 gtacaataataaaagttgaaacattataaaagaaaagaagtttgtttt 221  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||    
T  38496169 gtacactaatgaaagttgaaacattataaaagaaaagaagtttgtttt 38496122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 42825219 - 42825298
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    ||||||||||||| | ||||||| |||||||| |||||| |||| ||||  |||||||||||  ||||||||||||||||    
T  42825219 gttttggaccaatgagaagagagaaaataaaagttgtcaacaaaattgtcacaaatggttgtcaatatatcactactcta 42825298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 12878841 - 12878919
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    |||||||||||| |||| |||| ||||||||||| | ||||||||| ||  |||||||||||||| ||||| |||||||    
T  12878841 ttttggaccaatgaaaaaagagtaaataaaaattatgatcaaagttatactaaatggttgtacatgtatcattactcta 12878919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 36416027 - 36415951
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    |||| ||||||| ||||||||| |||  ||| ||||||| ||||||||| ||||  |||||||||||||||||||||    
T  36416027 tttttgaccaatcaaaagagagaaaaccaaagttgtcatgaaagttgtaccaaagagttgtacatatatcactactc 36415951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 8725379 - 8725307
Alignment:
Q  86 ttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    |||||||||||| || |||| |||| ||| ||||||||||||||||  |||||||||||  ||||||||||||||    
T  8725379 ttggaccaataagaaaagagaaaatgaaagttgtcatcaaagttgtcccaaatggttgt--atatatcactactc 8725307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 20125495 - 20125574
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    ||||| ||||||| | ||||||| |||| ||| ||||||||||||||||  ||||| |||||| ||||||||| ||||||    
T  20125495 gtttttgaccaatgagaagagagaaaatgaaagttgtcatcaaagttgtcccaaatagttgtatatatatcaccactcta 20125574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 159
Target Start/End: Original strand, 32425058 - 32425133
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactact 159  Q
    |||| ||||||| |||||| || |||| ||| ||||||| ||||||||| ||||| ||||||||||| ||||||||    
T  32425058 tttttgaccaatcaaaagatagaaaattaaagttgtcatgaaagttgtaccaaatagttgtacatatgtcactact 32425133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 126
Target Start/End: Original strand, 42807413 - 42807456
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaa 126  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  42807413 gttttggaccaataaaaagagagaaaataaaagttgtcatcaaa 42807456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 14914475 - 14914553
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||| ||||||||| ||||||  |||  ||| |||||||||||||| ||| |||||| |||||| |||||||||||||    
T  14914475 gtttttgaccaataagaagagataaaaacaaagttgtcatcaaagttatatgaaatggatgtacaaatatcactactct 14914553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 39595379 - 39595456
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    ||||| ||||||| ||||||||| ||| | || ||||||  ||||||||||||||||||||| || |||||| |||||    
T  39595379 gtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatggttgttcaaatatcattactc 39595456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 159
Target Start/End: Original strand, 125197 - 125273
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactact 159  Q
    ||||| ||||||| ||||||||| ||| | || |||||   ||||||||||||||||||||| || |||||||||||    
T  125197 gtttttgaccaatgaaaagagagaaaaaagaagttgtcgcaaaagttgtatcaaatggttgttcaaatatcactact 125273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 40566183 - 40566103
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaa-ttgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    ||||| ||||||| ||||||||| ||||||||| |||| |  |||||||| |||||||| ||| || ||||||||||||||    
T  40566183 gtttttgaccaatgaaaagagagaaaataaaaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactcta 40566103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 3141608 - 3141678
Alignment:
Q  90 accaataaaaagagagcaaataaaaattgtcatcaaa-gttgtatcaaatggttgtacatatatcactactc 160  Q
    |||||| ||||||||| ||| |||| ||||||||||| ||||||| |||||||||| || ||||||||||||    
T  3141608 accaatgaaaagagagaaaa-aaaagttgtcatcaaaagttgtatgaaatggttgttcaaatatcactactc 3141678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 15290986 - 15290911
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactact 159  Q
    |||| ||||||| ||||| ||| |||| |||||| | || ||||||||| ||||  ||||||||||||||||||||    
T  15290986 tttttgaccaatcaaaagggagaaaattaaaattattataaaagttgtaccaaagagttgtacatatatcactact 15290911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 17489453 - 17489532
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgt-atcaaatggttgtacatatatcactactct 161  Q
    ||||| ||||||||| ||||||| |||  || ||||||| ||||||||| ||||| ||| |||||| |||||||||||||    
T  17489453 gtttttgaccaataagaagagagaaaaacaagattgtcaccaaagttgtcatcaattggatgtacaaatatcactactct 17489532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 161
Target Start/End: Original strand, 285332 - 285409
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||| ||||||| |||||| || |||| ||| ||| ||| |||||||||  |||  ||||||||||||||||||||||    
T  285332 tttttgaccaatcaaaagatagaaaattaaagttggcatgaaagttgtactaaagagttgtacatatatcactactct 285409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 36624423 - 36624500
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    ||||| ||||||| ||||||||| |||| ||||||||||   || |||||||||||| |||| || |||||| |||||    
T  36624423 gtttttgaccaatgaaaagagagaaaatgaaaattgtcaaataaattgtatcaaatgcttgttcaaatatcattactc 36624500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 39191800 - 39191723
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    ||||||||  |||| ||| |||| ||||||||||| |||||||||||||   | ||||||||||| ||||||| ||||    
T  39191800 gttttggattaatagaaatagagtaaataaaaattatcatcaaagttgttagatatggttgtacaaatatcacaactc 39191723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 3155108 - 3155184
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    |||||||||||||| || |||| |||| ||| ||||||| ||||||||   | ||| ||||||| ||||||||||||    
T  3155108 ttttggaccaataagaatagagaaaatgaaagttgtcattaaagttgtcatatatgattgtacaaatatcactactc 3155184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 8787093 - 8787049
Alignment:
Q  112 aaaattgtcatcaaagttgtatcaaatggttgtacatatatcact 156  Q
    |||||||||||  |||||||| |||||||||||||| ||||||||    
T  8787093 aaaattgtcatacaagttgtaccaaatggttgtacaaatatcact 8787049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 11306808 - 11306880
Alignment:
Q  90 accaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    |||||| ||||||||| ||| | || |||||   ||||||||||||||| ||||| || ||||||||||||||    
T  11306808 accaatgaaaagagagaaaaaagaagttgtctcaaaagttgtatcaaatagttgttcaaatatcactactcta 11306880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 12349914 - 12349966
Alignment:
Q  107 aaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactact 159  Q
    ||||||||||| |||  ||||||||||||||| ||||| || |||||||||||    
T  12349914 aaataaaaattatcacaaaagttgtatcaaatagttgttcaaatatcactact 12349966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 20591430 - 20591362
Alignment:
Q  93 aataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||||||  |||||||| ||||||| ||||||||   | ||||||||||| ||||||| |||||    
T  20591430 aataaaaagagaataaataaaagttgtcattaaagttgttagatatggttgtacaaatatcacaactct 20591362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 47509113 - 47509037
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactact 159  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47509113 gttttggaccaataagaaaagaacaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactact 47509037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 43176304 - 43176377
Alignment:
Q  87 tggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    |||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||    
T  43176304 tggatcaataaaaagagagcaaataaaagttatcatcaaagttgtatcaaatggttgtatatatatcactactc 43176377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 84 - 161
Target Start/End: Original strand, 22153970 - 22154047
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||||||||||| |||||||||||||| ||| ||||||| ||||||||| |||||||||||||| |||||||||||||    
T  22153970 ttttggaccaatgaaaagagagcaaatgaaagttgtcattaaagttgtaccaaatggttgtacaaatatcactactct 22154047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 11233997 - 11233919
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||||||| |||| | ||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||    
T  11233997 gttttggatcaatgagaagagagtaaataaaagttgtcatcaaagttgtaccaaatggttgtacatatatcagtactct 11233919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 44334767 - 44334690
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    ||||||||||||| | ||||||| ||||||||||||||| |||||||||  |||||||||||  ||||||||||||||    
T  44334767 gttttggaccaatgagaagagagaaaataaaaattgtcaacaaagttgtcacaaatggttgtcaatatatcactactc 44334690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 622425 - 622346
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    ||||||||||||| | ||||||| |||||||| |||||| |||||||||  |||||||||||  ||||||||||||||||    
T  622425 gttttggaccaatgagaagagagaaaataaaagttgtcaacaaagttgtcacaaatggttgtcaatatatcactactcta 622346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 7231972 - 7231893
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    ||||| ||||||| ||||||||| ||| | |||||||||  ||||||||||||||||||||| || ||||||||||||||    
T  7231972 gtttttgaccaatgaaaagagagaaaaaataaattgtcacaaaagttgtatcaaatggttgttcaaatatcactactcta 7231893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 23920402 - 23920480
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||||||||  ||||||| |||||||||||||||| ||||||||  || ||||||||||| ||||||| |||||    
T  23920402 gttttggaccaataggaagagagtaaataaaaattgtcattaaagttgttacatatggttgtacaaatatcacaactct 23920480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 35425638 - 35425560
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||||||| |||| | |||||||||||| ||| |||||||||||| |||| |||||| || ||||||||||||||||||    
T  35425638 gttttggatcaatgagaagagagcaaatgaaagttgtcatcaaagatgtaccaaatgattatacatatatcactactct 35425560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 42424336 - 42424414
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||||||| |||| | ||||||  |||| ||| ||||||||||||||||| ||||||| ||||||||||||||||||||    
T  42424336 gttttggagcaatgagaagagaataaatgaaagttgtcatcaaagttgtaccaaatggatgtacatatatcactactct 42424414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 2812386 - 2812465
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    ||||||||||||||| |||| || |||| |||||| |||| |||||||| |||||| ||| ||||||||| |||||||||    
T  2812386 gttttggaccaataagaagaaagaaaatgaaaattatcattaaagttgtctcaaatagttatacatatattactactcta 2812465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 37323774 - 37323841
Alignment:
Q  85 tttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatat 152  Q
    ||||||||||||| ||| ||| |||| ||||||||||||||||||||  ||||| |||||||||||||    
T  37323774 tttggaccaataagaagggagaaaatgaaaattgtcatcaaagttgtcccaaatagttgtacatatat 37323841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 18713709 - 18713787
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    |||||||||||| | |||||||  ||| ||| ||||||| ||| ||||  |||||||||||||||||||||||||||||    
T  18713709 ttttggaccaatgagaagagagagaatgaaagttgtcattaaaattgttccaaatggttgtacatatatcactactcta 18713787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 40159791 - 40159713
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    |||| ||||||| ||||||||| |||  ||| ||||||| ||||||||| ||||  |||||||||||||||||||||||    
T  40159791 tttttgaccaatcaaaagagagaaaaccaaagttgtcatgaaagttgtaccaaagagttgtacatatatcactactcta 40159713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 46473233 - 46473311
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||| ||||||| ||||||||| ||| | || ||||||| ||||||||||||||||||||| || |||||| ||||||    
T  46473233 gtttttgaccaatgaaaagagagaaaaaagaagttgtcataaaagttgtatcaaatggttgttcaaatatcattactct 46473311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 28300612 - 28300535
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    ||||| ||||||| ||||||||| |||||||| ||||||  | |||||||||| |||||||| || ||||||||||||    
T  28300612 gtttttgaccaatgaaaagagagaaaataaaagttgtcacaagagttgtatcatatggttgttcaaatatcactactc 28300535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 161
Target Start/End: Complemental strand, 51032591 - 51032514
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||| ||||||| |||||| || |||| ||| ||||||| |||||||||| |||  ||||||||||||||||||||||    
T  51032591 tttttgaccaatcaaaagatagaaaattaaagttgtcatgaaagttgtataaaaaagttgtacatatatcactactct 51032514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 83 - 159
Target Start/End: Original strand, 26668945 - 26669021
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactact 159  Q
    ||||||||||||| ||||  ||| |||| ||| ||||||||| ||||||   |||||||||||||||||||||||||    
T  26668945 gttttggaccaatgaaaaatgagaaaatgaaagttgtcatcatagttgtcctaaatggttgtacatatatcactact 26669021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 156
Target Start/End: Complemental strand, 53133914 - 53133841
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcact 156  Q
    |||||||||||||| ||||||||||  | | | ||||||||||||||||  || ||||||||||| ||||||||    
T  53133914 gttttggaccaatagaaagagagcacctgatagttgtcatcaaagttgtcacacatggttgtacaaatatcact 53133841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 12094356 - 12094280
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactact 159  Q
    ||||| ||||||||| |||||||||||| |||  |||||||||||||||   | | ||||||||| |||||||||||    
T  12094356 gttttagaccaataagaagagagcaaatgaaatgtgtcatcaaagttgtcatagacggttgtacaaatatcactact 12094280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 48179014 - 48178942
Alignment:
Q  90 accaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    |||||||||||||||| |||  ||||||||||| ||| ||||| ||||  ||||| ||||||||||| |||||    
T  48179014 accaataaaaagagagaaaactaaaattgtcatgaaaattgtaccaaagagttgtgcatatatcacttctcta 48178942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 162
Target Start/End: Original strand, 3484891 - 3484929
Alignment:
Q  124 aaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  3484891 aaagttgtcacaaatggttgtacatatatcactactcta 3484929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 11173555 - 11173633
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||| ||||||| ||||||||| ||| | || ||||||  ||||||||||||||||||||| || |||| | ||||||    
T  11173555 gtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatggttgttcaaatattattactct 11173633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 29706015 - 29706085
Alignment:
Q  90 accaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    |||||| ||||||||| ||| | || ||||||  ||||||||||||||| ||||| || ||||||||||||    
T  29706015 accaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatcactactc 29706085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 42104537 - 42104599
Alignment:
Q  99 aagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||| |||||||| ||||||| ||||||||  || ||||||||||| ||||||| |||||    
T  42104537 aagagagtaaataaaagttgtcattaaagttgttacatatggttgtacaaatatcacaactct 42104599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 46092925 - 46092847
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||| ||||||||||||||||| ||| |||| |||| || | | |||||  |||||||||| || |||||||||||||    
T  46092925 gtttttgaccaataaaaagagaggaaaaaaaagttgtaatgataattgtaaaaaatggttgttcaaatatcactactct 46092847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 46953087 - 46953133
Alignment:
Q  116 ttgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    ||||||| ||||||||||||||| ||||| || ||||||||||||||    
T  46953087 ttgtcataaaagttgtatcaaatagttgttcaaatatcactactcta 46953133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 24748733 - 24748770
Alignment:
Q  124 aaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  24748733 aaagttgtctcaaatagttgtacatatatcactactct 24748770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 28300420 - 28300457
Alignment:
Q  124 aaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  28300420 aaagttgtaccaaatggatgtacatatatcactactct 28300457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 31997917 - 31997986
Alignment:
Q  93 aataaaaagagagcaaataaaaattgtcatcaaa-gttgtatcaaatggttgtacatatatcactactct 161  Q
    |||||||||||||  || | || ||||||||||| ||||| |||||||||||| || |||||||||||||    
T  31997917 aataaaaagagagagaaaagaagttgtcatcaaaagttgtctcaaatggttgttcaaatatcactactct 31997986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 11335267 - 11335191
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    |||| ||||||| ||| ||||| |||  ||| |||| || ||||||||| ||||  |||||||||||||||||||||    
T  11335267 tttttgaccaatcaaatgagagaaaactaaagttgtaataaaagttgtaccaaagagttgtacatatatcactactc 11335191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 23906953 - 23906873
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgt-atcaaatggttgtacatatatcactactcta 162  Q
    ||||| ||||||||| ||||||| |||  ||  |||||| ||||||||| ||||| ||| |||||| ||||||||||||||    
T  23906953 gtttttgaccaataagaagagagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcactactcta 23906873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 161
Target Start/End: Complemental strand, 55344255 - 55344183
Alignment:
Q  90 accaataaaaagagagcaaataaaaattgtcatcaaa-gttgtatcaaatggttgtacatatatcactactct 161  Q
    |||||| ||||||||| ||| |||| ||||||| ||| ||||||| |||| ||||| || |||||||||||||    
T  55344255 accaatgaaaagagagaaaagaaaagttgtcataaaatgttgtatgaaatagttgttcaaatatcactactct 55344183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 7693420 - 7693498
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  7693420 gttttggaccaataagaagagagaaaataaaaattgtcatcaaagttgtcccaaatggttgtacatatatcactactct 7693498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 2333480 - 2333558
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||| ||||| ||||||| |||||||||||||||||||| |||| ||||||| |||||||||||||| ||||||    
T  2333480 gttttggactaataagaagagagaaaataaaaattgtcatcaaaattgtttcaaatgattgtacatatatcagtactct 2333558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 3821509 - 3821588
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    |||||||| |||| | |||||| |||||||||||||||||||||||| || ||||||  |||||||||||||||||||||    
T  3821509 gttttggatcaatgagaagagaacaaataaaaattgtcatcaaagttataccaaatgaatgtacatatatcactactcta 3821588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 30622129 - 30622208
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    ||||||||||||||| ||||||  |||| ||| ||||||||||||||||  ||||| |||||||||||||||||||||||    
T  30622129 gttttggaccaataagaagagaaaaaatgaaagttgtcatcaaagttgtcccaaatagttgtacatatatcactactcta 30622208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 14569272 - 14569350
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||||||| |||||||||  ||||||| || ||||||||||| | |||||||||||||| ||||||||||||||    
T  14569272 gttttggaccaatgaaaagagagataataaaatttatcatcaaagttatctcaaatggttgtacgtatatcactactct 14569350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 19789041 - 19788963
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    |||||||||||| | ||||||| |||| | | ||||||||||||||||  |||||||||||||||||||||||||||||    
T  19789041 ttttggaccaatgagaagagagaaaatcagagttgtcatcaaagttgtcccaaatggttgtacatatatcactactcta 19788963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 28647400 - 28647322
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    |||||||||||| | |||||| ||||| ||| |||||| |||||||||| ||||||| |||||||||||||||||||||    
T  28647400 ttttggaccaatgagaagagaacaaattaaagttgtcaacaaagttgtaccaaatggatgtacatatatcactactcta 28647322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 6158746 - 6158669
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    |||||||||||||| |||||||| |||||||| ||||||| ||||||||   | ||||||||||| ||||||| ||||    
T  6158746 gttttggaccaatagaaagagagtaaataaaagttgtcattaaagttgttagatatggttgtacacatatcacaactc 6158669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 83 - 155
Target Start/End: Complemental strand, 26860581 - 26860509
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcac 155  Q
    |||||||||||||| |||||||| |||||||| ||||||| ||||||||   | ||||||||||| |||||||    
T  26860581 gttttggaccaatagaaagagagtaaataaaagttgtcattaaagttgttagatatggttgtacaaatatcac 26860509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 9200215 - 9200286
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatca 154  Q
    ||||||||||||||  ||||||| |||||||| ||||||||||||||||   | ||||||||||| ||||||    
T  9200215 gttttggaccaataggaagagagtaaataaaagttgtcatcaaagttgttagatatggttgtacaaatatca 9200286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 30733120 - 30733191
Alignment:
Q  89 gaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    |||||||||||| |||| | | |||||||||||  |||||||| ||||||||||||  | ||||||||||||    
T  30733120 gaccaataaaaaaagagaacaaaaaaattgtcacaaaagttgtctcaaatggttgtttaaatatcactactc 30733191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 161
Target Start/End: Complemental strand, 30906622 - 30906551
Alignment:
Q  90 accaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||||||||||  || | |||||||||| | |||||| |||||||| ||| || |||||||||||||    
T  30906622 accaataaaaagagagagaaaagaaattgtcataagagttgtttcaaatggatgttcaaatatcactactct 30906551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 23633291 - 23633213
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||||||| |||| |||| |||||||| |||||| |||| ||||   ||||||||||  ||||||||| |||||    
T  23633291 gttttggaccaatgaaaaaagagaaaataaaagttgtcaacaaaattgtcagaaatggttgtcaatatatcaccactct 23633213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 161
Target Start/End: Original strand, 27102217 - 27102283
Alignment:
Q  95 taaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||||| |||| ||| ||||||| ||||||||| ||||  |||||||| |||| ||||||||    
T  27102217 taaaaagagagaaaatcaaagttgtcatgaaagttgtaccaaagagttgtacaaatattactactct 27102283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 161
Target Start/End: Original strand, 27144039 - 27144105
Alignment:
Q  95 taaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||||| |||| ||| ||||||| ||||||||| ||||  |||||||| |||| ||||||||    
T  27144039 taaaaagagagaaaatcaaagttgtcatgaaagttgtaccaaagagttgtacaaatattactactct 27144105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 18792398 - 18792321
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    |||||| ||||||| |||||||| |||||||| ||||||| ||| ||||   | ||||||||||| ||||||| ||||    
T  18792398 gttttgaaccaatagaaagagagtaaataaaagttgtcattaaaattgttagatatggttgtacaaatatcacaactc 18792321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 27176063 - 27176139
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    |||||||||||||| |||| ||||||| ||| ||||||| |||| |||  |||||  || |||| ||||||||||||    
T  27176063 ttttggaccaataagaagaaagcaaatgaaagttgtcattaaagatgtcacaaattattttacaaatatcactactc 27176139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 32253892 - 32253964
Alignment:
Q  90 accaataaaaagagagc-aaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||||| |||||||||  ||| |||||||||||  ||||||||| ||||| ||||| || |||||||||||||    
T  32253892 accaatgaaaagagagagaaaaaaaaattgtcacaaaagttgtaccaaatagttgttcaaatatcactactct 32253964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 42665778 - 42665699
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    ||||||||||||| |||| ||||||||| ||| ||||||||||||||||| |||||||||||||| ||||||||||||||    
T  42665778 gttttggaccaatgaaaaaagagcaaatgaaagttgtcatcaaagttgtaccaaatggttgtacaaatatcactactcta 42665699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 11442777 - 11442854
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    ||||||||||||| |||||||| ||||| ||| |||||| |||||||||| ||||||| |||||||||||||||||||    
T  11442777 gttttggaccaatgaaaagagaacaaattaaagttgtcaacaaagttgtaccaaatggatgtacatatatcactactc 11442854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 546351 - 546272
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    ||||||||||||| | ||||||| |||||||| |||||| |||||||||  |||||||||||  ||||||||||||||||    
T  546351 gttttggaccaatgagaagagagaaaataaaagttgtcaacaaagttgtcacaaatggttgtcaatatatcactactcta 546272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 36909809 - 36909732
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    ||||| ||||||||| ||||||| |||  ||| |||||||||||||||||| |||||| |||||| ||||||||||||    
T  36909809 gtttttgaccaataagaagagagaaaaacaaagttgtcatcaaagttgtatgaaatggatgtacaaatatcactactc 36909732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 42554881 - 42554958
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    |||||||||||||  |||||||  |||| ||| |||| |||||||||||| ||||||||||||| |||||||||||||||    
T  42554881 gttttggaccaatggaaagaga--aaatgaaagttgttatcaaagttgtaccaaatggttgtacttatatcactactcta 42554958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 7497957 - 7497879
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||||| |||||| | ||||||| |||||||| |||||| |||||||||  |||||||||||  |||||||||||||||    
T  7497957 gttttgaaccaatgagaagagagaaaataaaagttgtcaacaaagttgtcacaaatggttgtcaatatatcactactct 7497879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 10389324 - 10389401
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    ||||||||||||| | ||||||| || | ||| | |||| |||||||||  |||||||||||||||||||||||||||    
T  10389324 gttttggaccaatgagaagagagaaagtgaaagtcgtcaccaaagttgtcccaaatggttgtacatatatcactactc 10389401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 19913896 - 19913969
Alignment:
Q  90 accaataaaaagagagcaaataaaaattgtcatc-aaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    |||||| ||||||||| ||| |||| |||||| | |||||||||| |||||||||| || ||||||||||||||    
T  19913896 accaatgaaaagagagaaaaaaaaagttgtcaccgaaagttgtatgaaatggttgttcaaatatcactactcta 19913969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 40496455 - 40496526
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatca 154  Q
    ||||||||||||||  ||||||| |||||||| |||||||||||||| |   | ||||||||||| ||||||    
T  40496455 gttttggaccaataggaagagagtaaataaaagttgtcatcaaagttattagatatggttgtacaaatatca 40496526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 3091846 - 3091924
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||| ||||||| ||||||||| ||| | || ||||||  |||||||||||||||  |||| || |||||||||||||    
T  3091846 gtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaataattgttcaaatatcactactct 3091924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 38912567 - 38912489
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||| || |||| |||||| | ||||| ||| || | || ||||||||| ||||||||||||||||||||| ||||||    
T  38912567 gttttagatcaatgaaaagaaaacaaatgaaagttattattaaagttgtaccaaatggttgtacatatatcattactct 38912489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 160
Target Start/End: Complemental strand, 2308274 - 2308213
Alignment:
Q  99 aagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    ||||||| |||| ||| ||||||||||||||||   | ||||||||||| ||||||||||||    
T  2308274 aagagagaaaatgaaagttgtcatcaaagttgtcatatatggttgtacaaatatcactactc 2308213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 161
Target Start/End: Original strand, 4723672 - 4723749
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||| ||||||| ||||||||| |||  ||| |||| || ||||||||| ||||  ||||||||||||||||| ||||    
T  4723672 tttttgaccaatcaaaagagagaaaactaaagttgttataaaagttgtaccaaagagttgtacatatatcactgctct 4723749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 34261948 - 34261911
Alignment:
Q  125 aagttgtatcaaatggttgtacatatatcactactcta 162  Q
    |||||||  |||||||||||||||||||||||||||||    
T  34261948 aagttgtcacaaatggttgtacatatatcactactcta 34261911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 35965687 - 35965764
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    |||||| |||||| | || |||| || ||||| || ||||||||||| |   ||||||||||||||||||||||||||    
T  35965687 gttttgaaccaatgagaatagagaaagtaaaagttatcatcaaagttctcataaatggttgtacatatatcactactc 35965764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 159
Target Start/End: Original strand, 6666125 - 6666201
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactact 159  Q
    ||||||||||||| | ||||||| |||||||| |||||| |||| ||||  |||||| || |  |||||||||||||    
T  6666125 gttttggaccaatgagaagagagaaaataaaagttgtcaacaaaattgtcacaaatgattatcaatatatcactact 6666201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 10550425 - 10550345
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgt-atcaaatggttgtacatatatcactactcta 162  Q
    ||||| |||||||||||| |||| |||  ||| |||||| ||||||||| ||||||||| ||| || |||||| |||||||    
T  10550425 gtttttgaccaataaaaatagagaaaaacaaagttgtcaacaaagttgtcatcaaatggatgtccaaatatcattactcta 10550345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 11164335 - 11164263
Alignment:
Q  90 accaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    |||||| ||||||||| ||| | || ||||||  ||||||||||||||| ||||| || ||||||| ||||||    
T  11164335 accaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatcaccactcta 11164263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 43057628 - 43057552
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    |||| ||||||| ||||||||| |||  ||| ||||||| |||||| |||||||  | ||||||||||||| |||||    
T  43057628 tttttgaccaatcaaaagagagaaaactaaagttgtcatgaaagttatatcaaagaggtgtacatatatcagtactc 43057552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 43650507 - 43650435
Alignment:
Q  89 gaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||||||||||| ||| | |||||||||   ||||||||||||||| ||||  | |||||| ||||||    
T  43650507 gaccaataaaaagagagaaaaaagaaattgtcacataagttgtatcaaatgattgtttaaatatcattactct 43650435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 41154134 - 41154212
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    |||||||||||| |  | ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41154134 ttttggaccaatgaggaaagagccaatgaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 41154212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 10096708 - 10096629
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    ||||||||||||| | |||||||||||| ||| ||||||||||||||||| ||||||| |||||||||||||||| ||||    
T  10096708 gttttggaccaatgagaagagagcaaatgaaagttgtcatcaaagttgtaccaaatggctgtacatatatcactattcta 10096629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 83 - 157
Target Start/End: Original strand, 17363335 - 17363409
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcacta 157  Q
    ||||||||||||| |||||||||||||| ||| |||||||||||||||||| |||||||| |||| |||||||||    
T  17363335 gttttggaccaatgaaaagagagcaaatgaaagttgtcatcaaagttgtataaaatggttttacaaatatcacta 17363409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 5234437 - 5234360
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    ||||| ||||||||||||||||| ||| |||||||||||  ||||||||||||||||||||| || ||||||||||||    
T  5234437 gtttttgaccaataaaaagagagaaaaaaaaaattgtcacaaaagttgtatcaaatggttgttcaaatatcactactc 5234360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 31275251 - 31275330
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    ||||| ||||||| ||||||||| ||| | |||||||||  ||||||||||||||||||||| || ||||||||||||||    
T  31275251 gtttttgaccaatgaaaagagagaaaaaagaaattgtcacaaaagttgtatcaaatggttgttcaaatatcactactcta 31275330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 34114083 - 34114006
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    ||||||||||||||| ||||||| |||| ||| ||  ||||||||||||  |||||| ||||||||||||||||||||    
T  34114083 gttttggaccaataagaagagagaaaatgaaagttaccatcaaagttgttccaaatgattgtacatatatcactactc 34114006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 45274369 - 45274445
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    |||||||||||| ||||||||| |||| | | ||||||||||||||||  ||||| |||||||||||||||| ||||    
T  45274369 ttttggaccaatgaaaagagagaaaatgagagttgtcatcaaagttgtcccaaatagttgtacatatatcaccactc 45274445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 4514231 - 4514152
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    ||||||||||||| | ||||||| |||| ||||||||||||||||||||    ||| |||||||||||||||| ||||||    
T  4514231 gttttggaccaatgagaagagagaaaatgaaaattgtcatcaaagttgtcatgaatagttgtacatatatcaccactcta 4514152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 11012230 - 11012309
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    |||| |||||||||| || |||| |||| ||| ||||||||||||||||  || ||| ||||||||||||||||||||||    
T  11012230 gtttcggaccaataagaaaagagaaaatgaaagttgtcatcaaagttgtcacatatgattgtacatatatcactactcta 11012309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 161
Target Start/End: Original strand, 42882575 - 42882638
Alignment:
Q  98 aaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||||||  |||| ||||||||||||||||||||  || |||||||||||||||||||||||||    
T  42882575 aaagagaaaaaatgaaaattgtcatcaaagttgtcacacatggttgtacatatatcactactct 42882638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 29525963 - 29526040
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    ||||||||||||| | |||||| ||||| ||| |||||| |||| || || ||||||| |||||||||||||||||||    
T  29525963 gttttggaccaatgagaagagaacaaattaaagttgtcaacaaaattataccaaatggatgtacatatatcactactc 29526040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 8906419 - 8906351
Alignment:
Q  94 ataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    |||| ||||||| |||| ||||||||||||||| ||||  || |||||||||||||||||| |||||||    
T  8906419 ataagaagagagaaaatgaaaattgtcatcaaaattgtcacatatggttgtacatatatcattactcta 8906351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 30778223 - 30778151
Alignment:
Q  90 accaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    |||||||||||||||| ||| | |||||||||| |||||| |||||||| ||||| || |||||| |||||||    
T  30778223 accaataaaaagagagaaaaaagaaattgtcataaaagttatatcaaatagttgttcaaatatcattactcta 30778151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 39067921 - 39067873
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgt 131  Q
    |||||||||||||| |||||||| |||||||| ||||||||||||||||    
T  39067921 gttttggaccaatagaaagagagtaaataaaagttgtcatcaaagttgt 39067873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 161
Target Start/End: Complemental strand, 29406996 - 29406925
Alignment:
Q  90 accaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||||| |||| |||| |||  ||||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  29406996 accaatcaaaatagagaaaaccaaaattgtcatgaaagttgtaccaaagagttgtacatatatcactactct 29406925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 35332809 - 35332888
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    ||||| ||||| | ||||||||| |||||| | || |||||||||||||  | |||||| ||||||||||||||||||||    
T  35332809 gtttttgaccagtgaaaagagagaaaataatagttatcatcaaagttgtcaccaatggtggtacatatatcactactcta 35332888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 51540812 - 51540737
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactact 159  Q
    |||| ||||||| ||||||||| |||  ||||||||||| ||||||||| ||||  |||||| |||||||||||||    
T  51540812 tttttgaccaatcaaaagagagaaaaccaaaattgtcataaaagttgtaccaaagagttgtatatatatcactact 51540737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 2193775 - 2193697
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgt-atcaaatggttgtacatatatcactactc 160  Q
    ||||| ||||||||| ||||||| |||  || ||||||||||||||||| ||||| ||| |||||| ||||||||||||    
T  2193775 gtttttgaccaataagaagagagaaaaacaagattgtcatcaaagttgtcatcaattggatgtacaaatatcactactc 2193697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 11064055 - 11063977
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||| |||| ||||||||| || |||| ||| |||||| ||||||||| | |||||||||| || |||||||||||||    
T  11064055 gtttttgaccgataaaaagaaagaaaatgaaagttgtcaccaaagttgtcttaaatggttgttcaaatatcactactct 11063977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 32713952 - 32714030
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    |||| |||||||||||| |||| |||| |||||||||| |||| || | |||||| ||||| || ||||||||||||||    
T  32713952 tttttgaccaataaaaaaagagaaaatgaaaattgtcaccaaaattatctcaaatcgttgttcaaatatcactactcta 32714030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 156
Target Start/End: Original strand, 42516742 - 42516812
Alignment:
Q  86 ttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcact 156  Q
    |||||||||| | ||||||  |||| ||| ||||||||||| ||||  |||||||||||||||||||||||    
T  42516742 ttggaccaatgagaagagaaaaaatgaaagttgtcatcaaaattgtcacaaatggttgtacatatatcact 42516812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 161
Target Start/End: Complemental strand, 4489764 - 4489687
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||| ||||||  |||||| || |||| ||| ||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  4489764 tttttgaccaaccaaaagatagaaaattaaagttgtcatgaaagttgtaccaaagagttgtacatatatcactactct 4489687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 31147336 - 31147384
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgt 131  Q
    ||||||||||||||| ||||||| |||||||| |||||||| |||||||    
T  31147336 gttttggaccaataagaagagagaaaataaaagttgtcatcgaagttgt 31147384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 83 - 157
Target Start/End: Complemental strand, 25139923 - 25139848
Alignment:
Q  83 gttttggaccaataaaaaga-gagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcacta 157  Q
    ||||| |||||||||||| | ||| |||||||| || | |||||||||||  ||||||||||| ||||||||||||    
T  25139923 gttttagaccaataaaaaaaagagaaaataaaagttatgatcaaagttgtcccaaatggttgttcatatatcacta 25139848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 40335882 - 40335956
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    ||||| ||||||| |  |||||| |||| ||| |||||||||||||||| |||||   ||||||||||||||||||||    
T  40335882 gttttagaccaatgaggagagagaaaatgaaagttgtcatcaaagttgtctcaaa---ttgtacatatatcactactc 40335956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 161
Target Start/End: Complemental strand, 42915178 - 42915107
Alignment:
Q  90 accaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||||| ||||||||| ||| | || ||||||  ||||||||||||||| ||||| || |||||||||||||    
T  42915178 accaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatcactactct 42915107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 13267444 - 13267366
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||| ||||||||| ||||||| |||  ||| || ||||||||||||||| |||| | | |||| |||||||||||||    
T  13267444 gtttttgaccaataagaagagagaaaaacaaagttttcatcaaagttgtatgaaatcgatttacaaatatcactactct 13267366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 20056487 - 20056565
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgt-atcaaatggttgtacatatatcactactc 160  Q
    ||||| ||||||||| ||||||| |||  || ||||||| ||||||||| ||||| ||| |||||| ||||||||||||    
T  20056487 gtttttgaccaataagaagagagaaaagcaagattgtcaccaaagttgtcatcaattggatgtacaaatatcactactc 20056565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 158
Target Start/End: Complemental strand, 39880995 - 39880921
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactac 158  Q
    |||| ||||||| ||||||||| |||  ||| ||||||| |||||||||  |||  |||||||||||||||||||    
T  39880995 tttttgaccaatcaaaagagagaaaaccaaagttgtcatgaaagttgtacgaaagagttgtacatatatcactac 39880921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 53357042 - 53356964
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    |||| ||||||| ||| |||||  ||| ||| |||||||  |||||||| ||||  |||||||||||||||||||||||    
T  53357042 tttttgaccaatcaaatgagagacaatcaaagttgtcatagaagttgtaccaaagagttgtacatatatcactactcta 53356964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 160
Target Start/End: Complemental strand, 19720574 - 19720529
Alignment:
Q  116 ttgtcatcaaagttgtat-caaatggttgtacatatatcactactc 160  Q
    |||||||||||||||| | ||||||| |||||||||||||||||||    
T  19720574 ttgtcatcaaagttgtcttcaaatggatgtacatatatcactactc 19720529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 131
Target Start/End: Complemental strand, 41678849 - 41678804
Alignment:
Q  86 ttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgt 131  Q
    |||||||||||| |||| | ||||||||||||||||||||| ||||    
T  41678849 ttggaccaataagaagataacaaataaaaattgtcatcaaaattgt 41678804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 50159055 - 50159116
Alignment:
Q  99 aagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    ||||||| |||||||| ||||||| ||||||||  || ||||||||||| ||||||| ||||    
T  50159055 aagagagtaaataaaagttgtcattaaagttgttacatatggttgtacaaatatcacaactc 50159116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 162
Target Start/End: Original strand, 51389435 - 51389500
Alignment:
Q  97 aaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    ||||||||| ||| | || ||||||  ||||||||||||||||||||| || |||||||| |||||    
T  51389435 aaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatggttgttcaaatatcactgctcta 51389500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 161
Target Start/End: Complemental strand, 1688392 - 1688316
Alignment:
Q  85 tttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||||| | ||||||| |||||||| |||| |  ||| ||||  |||||||||||  |||||||||||||||    
T  1688392 tttggaccaatgagaagagagaaaataaaagttgtgaataaaattgtcacaaatggttgtcaatatatcactactct 1688316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 31240760 - 31240832
Alignment:
Q  90 accaataaaaagagagcaaataaaaattgtcatcaaa-gttgtatcaaatggttgtacatatatcactactct 161  Q
    |||||| ||||||||| ||| | || |||||| |||| ||||||| |||||||||| || |||||||||||||    
T  31240760 accaatgaaaagagagaaaaaagaagttgtcaccaaaagttgtatgaaatggttgttcaaatatcactactct 31240832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 32901434 - 32901514
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgt-atcaaatggttgtacatatatcactactcta 162  Q
    ||||| ||||||||||||||||| |||  || ||||||| |||| || | ||||| ||| |||||| ||||||||||||||    
T  32901434 gtttttgaccaataaaaagagagaaaaacaagattgtcaccaaaattatcatcaattggatgtacaaatatcactactcta 32901514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 40308538 - 40308586
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgt 131  Q
    ||||||||||||||||||||||| | || ||| ||||||||||| ||||    
T  40308538 gttttggaccaataaaaagagagaacatgaaagttgtcatcaaaattgt 40308586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 30530365 - 30530287
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||||||||| ||||||| |||| ||| ||||||||||||||||  ||||||||||||||||||||||||||||    
T  30530365 gttttggaccaataagaagagagaaaatgaaagttgtcatcaaagttgtcccaaatggttgtacatatatcactactct 30530287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 8464478 - 8464400
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    |||||||||||||||||||||| |||| ||| |||||||||||||||   ||| |||||||||||||||||||||||||    
T  8464478 ttttggaccaataaaaagagagaaaatgaaagttgtcatcaaagttggcccaagtggttgtacatatatcactactcta 8464400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 42792388 - 42792455
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatat 150  Q
    |||||||| |||||||||||||  ||||||||||||||||||||||||||| ||||| ||||||||||    
T  42792388 gttttggatcaataaaaagagaataaataaaaattgtcatcaaagttgtataaaatgattgtacatat 42792455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 50884736 - 50884657
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    ||||||||| ||| | |||| ||||||| ||| || |||||||||||||| |||||||||||||||||||||||||||||    
T  50884736 gttttggactaatgagaagatagcaaatgaaagttttcatcaaagttgtaccaaatggttgtacatatatcactactcta 50884657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 34002286 - 34002209
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    ||||||||||||||| ||||||| |||| ||| |||| |||||||||||  ||||| |||||||||||||||||||||    
T  34002286 gttttggaccaataagaagagagaaaatgaaagttgtgatcaaagttgtcccaaatagttgtacatatatcactactc 34002209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 21154361 - 21154405
Alignment:
Q  116 ttgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  21154361 ttgtcatcaaagttgtatcaaatggttgtacatatatcactactc 21154405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 52369077 - 52369001
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactact 159  Q
    ||||||||||||| | || ||||||||| ||| |||||||||||||||||  |||| ||||||||||||||||||||    
T  52369077 gttttggaccaatgagaatagagcaaatgaaagttgtcatcaaagttgtactaaatagttgtacatatatcactact 52369001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 24775080 - 24775158
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||||||| | ||||||| ||||||||||||||| |||||||||   ||||||||||  |||||||||||||||    
T  24775080 gttttggaccaatgagaagagagaaaataaaaattgtcaacaaagttgtcaaaaatggttgtcaatatatcactactct 24775158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 33422185 - 33422107
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||||||| | ||||||| |||||||| |||||| |||||||||  |||||||||||  |||||||||||||||    
T  33422185 gttttggaccaatgagaagagagaaaataaaagttgtcaacaaagttgtcacaaatggttgtcaatatatcactactct 33422107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 33669789 - 33669711
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||||||| | ||||||  |||| | | ||||||||||||||||  ||||||||||||||||||||||||||||    
T  33669789 gttttggaccaatgagaagagaaaaaatgagagttgtcatcaaagttgtcccaaatggttgtacatatatcactactct 33669711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 44112559 - 44112637
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||||||| | ||||||| |||||||| |||||| |||||||||  |||||||||||  |||||||||||||||    
T  44112559 gttttggaccaatgagaagagagaaaataaaagttgtcaacaaagttgtcacaaatggttgtcaatatatcactactct 44112637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 49596346 - 49596424
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||||||| | ||  |||||||| ||| || |||||||||||||| ||||||||||||||||||||| ||||||    
T  49596346 gttttggaccaatgagaatggagcaaattaaagttatcatcaaagttgtaccaaatggttgtacatatatcattactct 49596424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 50017389 - 50017311
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||||||| ||||||||| || | ||| || ||| ||||||||| |||||||||||||||||||||| ||||||    
T  50017389 gttttggaccaatgaaaagagagaaattgaaagttatcaacaaagttgtctcaaatggttgtacatatatcagtactct 50017311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 52417636 - 52417714
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||||||||| ||||||| |||| ||| || |||||||||||||  ||||| |||||| |||||||||||||||    
T  52417636 gttttggaccaataagaagagagaaaatgaaagttatcatcaaagttgttccaaatagttgtatatatatcactactct 52417714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 51250257 - 51250180
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    ||||| || |||||| ||||||| |||||||| |||||||||||||| | ||||||| |||||||||||||| |||||    
T  51250257 gttttagatcaataagaagagagaaaataaaagttgtcatcaaagttatttcaaatgattgtacatatatcagtactc 51250180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 4511743 - 4511665
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||||||| | ||||||  |||| ||| |||||||| |||||||  ||||||||||||||||||||| ||||||    
T  4511743 gttttggaccaatgagaagagaaaaaatgaaagttgtcatctaagttgtcccaaatggttgtacatatatcattactct 4511665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 5315316 - 5315394
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||||| |||||||| || |||| |||| ||| | |||||||||||||| | ||||||||||||||||| |||||||||    
T  5315316 gttttgaaccaataagaaaagagaaaatgaaagtcgtcatcaaagttgtctaaaatggttgtacatatagcactactct 5315394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 161
Target Start/End: Complemental strand, 44641868 - 44641791
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||||||||||| | ||||||| |||||||| |||||| ||||||| |  |||||||||||  |||||||||||||||    
T  44641868 ttttggaccaatgagaagagagaaaataaaagttgtcaacaaagttatcacaaatggttgtcaatatatcactactct 44641791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 83 - 155
Target Start/End: Original strand, 5975642 - 5975714
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcac 155  Q
    |||||||||||||| |||||||| |||||||| ||||||| ||||||||   | ||||||||||| |||||||    
T  5975642 gttttggaccaatagaaagagagtaaataaaagttgtcattaaagttgttagatatggttgtacaaatatcac 5975714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 24611949 - 24612027
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||||||||||||  ||  |||||||| ||||||||||||||||   | ||||||||||| ||||||| |||||    
T  24611949 gttttggaccaataaaaattgaataaataaaagttgtcatcaaagttgttagatatggttgtacaaatatcacaactct 24612027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 161
Target Start/End: Complemental strand, 11570328 - 11570251
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||| ||||||| ||||||||| | | |||| ||||||| |||||||||  |||  ||||||||||||||||||||||    
T  11570328 tttttgaccaatcaaaagagagaagacaaaagttgtcatgaaagttgtacgaaagagttgtacatatatcactactct 11570251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 156
Target Start/End: Original strand, 15059729 - 15059802
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcact 156  Q
    ||||||||| ||| | ||||||| |||| ||||||||||||||| ||||  |||||| |||||||| |||||||    
T  15059729 gttttggacaaatgagaagagagaaaatgaaaattgtcatcaaaattgtcccaaatgattgtacatgtatcact 15059802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 44503592 - 44503547
Alignment:
Q  111 aaaaattgtcatcaaagttgtatcaaatggttgtacatatatcact 156  Q
    |||| |||||||||||||||||||||||| |||||||||| |||||    
T  44503592 aaaagttgtcatcaaagttgtatcaaatgattgtacatatgtcact 44503547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 39220326 - 39220378
Alignment:
Q  109 ataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||||||| |||||||||  |||||||||||  |||||||||||||||    
T  39220326 ataaaaattgtcaacaaagttgtcacaaatggttgtcaatatatcactactct 39220378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 7503577 - 7503644
Alignment:
Q  90 accaataaaaagagagcaaataaaaattgtcatc-aaagttgtatcaaatggttgtacatatatcact 156  Q
    |||||| ||||||||| ||| ||||||||||| | |||||||||| |||||||||| || ||||||||    
T  7503577 accaatgaaaagagagaaaaaaaaaattgtcaccaaaagttgtatgaaatggttgttcaaatatcact 7503644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 91 - 161
Target Start/End: Original strand, 15061958 - 15062029
Alignment:
Q  91 ccaataaaaagagagcaaataaaaattgtcatcaaa-gttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||||||||| ||| |||| |||||| |||| ||| ||| |||||||||| || |||||||||||||    
T  15061958 ccaataaaaagagagaaaaaaaaagttgtcaccaaaagttatatgaaatggttgttcaaatatcactactct 15062029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 24910099 - 24910021
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    |||| |||||||| ||| |||  ||||||||||| |||||||||||||   | ||||||||||| ||||||| ||||||    
T  24910099 ttttagaccaatagaaatagaataaataaaaattatcatcaaagttgttagatatggttgtacaaatatcacaactcta 24910021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 45470805 - 45470727
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||||||||| ||||||| |||| ||| |||| ||||||||| |  ||||| |||||| || |||| |||||||    
T  45470805 gttttggaccaataagaagagagaaaatgaaagttgtgatcaaagtttttccaaatagttgtaaatttatcgctactct 45470727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 48576471 - 48576393
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||||||||||||| |||||||||| || | | ||||||| ||||||||  || || |||||||| |||||||| ||||    
T  48576471 gttttggaccaatagaaagagagcacatgatagttgtcataaaagttgtcacacatagttgtacaaatatcacttctct 48576393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 160
Target Start/End: Complemental strand, 51193091 - 51193021
Alignment:
Q  91 ccaataaaaagagagcaaataaaaattgtcatcaaagttgt-atcaaatggttgtacatatatcactactc 160  Q
    ||||||| ||||||| |||  ||  ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  51193091 ccaataagaagagagaaaaacaatgttgtcatgaaagttgtcatcaaatggatgtacatatatcactactc 51193021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 4154687 - 4154764
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    ||||||||||||||| ||||||| |||||||| || |||| ||||||||   | ||| ||||||| ||||||| ||||    
T  4154687 gttttggaccaataagaagagagtaaataaaagttatcattaaagttgttagatatgtttgtacaaatatcacaactc 4154764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 26547372 - 26547417
Alignment:
Q  116 ttgtcatcaaagttgtat-caaatggttgtacatatatcactactc 160  Q
    |||||||||||||||| | ||||||| |||||||||||||||||||    
T  26547372 ttgtcatcaaagttgtcttcaaatggatgtacatatatcactactc 26547417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 33660182 - 33660227
Alignment:
Q  116 ttgtcatcaaagttgt-atcaaatggttgtacatatatcactactc 160  Q
    ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  33660182 ttgtcatgaaagttgtcatcaaatggatgtacatatatcactactc 33660227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 40139218 - 40139287
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatat 152  Q
    ||||||||| ||| | ||||||| |||| ||| ||||||||||| ||||  ||||| |||||||||||||    
T  40139218 gttttggacaaatgagaagagagaaaatgaaagttgtcatcaaacttgtcacaaatagttgtacatatat 40139287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 162
Target Start/End: Complemental strand, 9362944 - 9362916
Alignment:
Q  134 caaatggttgtacatatatcactactcta 162  Q
    |||||||||||||||||||||||||||||    
T  9362944 caaatggttgtacatatatcactactcta 9362916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 49589932 - 49589860
Alignment:
Q  89 gaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||| | ||||||| |||||||| |||||| |||||||||  ||||| ||| |  |||||||||||||||    
T  49589932 gaccaatgagaagagagaaaataaaagttgtcaacaaagttgtcacaaatagttatcaatatatcactactct 49589860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 5e-22; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 34996321 - 34996248
Alignment:
Q  88 ggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||||||| |||||||||||||| ||| ||||||||||||||||| ||||| ||||||||||||||||||||||    
T  34996321 ggaccaatgaaaagagagcaaatgaaagttgtcatcaaagttgtaccaaatagttgtacatatatcactactct 34996248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 27631052 - 27631130
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||| ||||||| ||||||||| |||||| | ||||||||||||||||  | ||||||||||||||||||||||||||    
T  27631052 gtttttgaccaatgaaaagagagaaaataatagttgtcatcaaagttgtcaccaatggttgtacatatatcactactct 27631130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 149
Target Start/End: Complemental strand, 5642356 - 5642290
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacata 149  Q
    ||||||||||||||| ||||||| |||||||| |||||||||||||| | |||||| ||||||||||    
T  5642356 gttttggaccaataagaagagagaaaataaaagttgtcatcaaagttatctcaaatagttgtacata 5642290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 149
Target Start/End: Complemental strand, 5644297 - 5644231
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacata 149  Q
    ||||||||||||||| ||||||| |||||||| |||||||||||||| | |||||| ||||||||||    
T  5644297 gttttggaccaataagaagagagaaaataaaagttgtcatcaaagttatctcaaatagttgtacata 5644231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 11155848 - 11155770
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||| ||| |||| |||  |||||||| ||||||||||||||||  ||||||||| ||||||||||||||||||    
T  11155848 gttttggactaatgaaaaaagaaaaaataaaagttgtcatcaaagttgtcacaaatggttctacatatatcactactct 11155770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 154
Target Start/End: Complemental strand, 324046 - 323975
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatca 154  Q
    ||||||||||||||| ||||||| |||||||| ||||||||||||||||   | ||||||||||| ||||||    
T  324046 gttttggaccaataagaagagagtaaataaaagttgtcatcaaagttgttagatatggttgtacagatatca 323975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 7129638 - 7129717
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    ||||| ||||||||| ||||||| |||  ||| |||||||||||||||||| |||||  |||||| ||||||||||||||    
T  7129638 gtttttgaccaataagaagagagaaaaacaaagttgtcatcaaagttgtatgaaatgaatgtacaaatatcactactcta 7129717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 41304948 - 41304869
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    ||||||||||||| | ||||||| |||||||| |||||| |||||||||  ||||| |||||  ||||||||||||||||    
T  41304948 gttttggaccaatgagaagagagaaaataaaagttgtcaacaaagttgtcacaaattgttgtcaatatatcactactcta 41304869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 8074691 - 8074614
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    |||||| |||||||| ||||||| |||| ||| ||||||||||||||||   | ||| ||||||||||||||||||||    
T  8074691 gttttgaaccaataagaagagagaaaatgaaagttgtcatcaaagttgtcaaatatgattgtacatatatcactactc 8074614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 9550388 - 9550312
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    |||| |||| || |||||| || |||| ||| ||||||| ||||||||||||||  |||||||||||||||||||||    
T  9550388 tttttgacctatcaaaagatagaaaattaaagttgtcatgaaagttgtatcaaagagttgtacatatatcactactc 9550312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 35594653 - 35594721
Alignment:
Q  87 tggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||||||||||||| |||| ||| |||||||||||||||       ||||||||||||||||||||||||    
T  35594653 tggaccaataaaaagagagaaaatgaaagttgtcatcaaagttg------gtggttgtacatatatcactactct 35594721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 10653749 - 10653671
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||||||||||||| |||  ||| |||||||| ||||||||||||||||   | ||||||||||| ||||||| |||||    
T  10653749 gttttggaccaatagaaattgagtaaataaaagttgtcatcaaagttgttagatatggttgtacaaatatcacaactct 10653671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 29910178 - 29910100
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||||| |||||| | ||||||| |||||||| |||||| |||||||||   ||||||||||  |||||||||||||||    
T  29910178 gttttgaaccaatgagaagagagaaaataaaagttgtcaacaaagttgtcaaaaatggttgtcaatatatcactactct 29910100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 40413329 - 40413251
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||| ||| ||| ||||||||| ||| | || || |||| ||||||||||||||||||||| || |||||||||||||    
T  40413329 gtttttgactaatgaaaagagagaaaaaagaagttatcataaaagttgtatcaaatggttgttcaaatatcactactct 40413251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 42026477 - 42026555
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||| ||||||||||||||||| |||||| | ||||||||||| ||||  | |||| || ||||||||| ||||||||    
T  42026477 gtttttgaccaataaaaagagagaaaataatagttgtcatcaaaattgtcaccaatgattatacatatattactactct 42026555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 5924916 - 5924993
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgt-atcaaatggttgtacatatatcactactc 160  Q
    |||| ||||||||| ||||||| |||  ||  ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  5924916 tttttgaccaataagaagagagaaaaataaggttgtcatgaaagttgtcatcaaatggatgtacatatatcactactc 5924993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 161
Target Start/End: Original strand, 27776267 - 27776344
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||| ||||||||||||||||| ||| ||||||||||| |||| |||| ||||||  |||  || |||||||||||||    
T  27776267 tttttgaccaataaaaagagaggaaaaaaaaattgtcaccaaaattgtctcaaataattgatcaaatatcactactct 27776344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 21273669 - 21273597
Alignment:
Q  90 accaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    |||||| ||||||||| ||| |||| ||||||  |||||||||| |||| ||||| || ||||||||||||||    
T  21273669 accaatgaaaagagagaaaagaaaagttgtcacaaaagttgtatgaaatagttgttcaaatatcactactcta 21273597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 40719609 - 40719533
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    |||| ||||||| ||||||||| |||  ||| ||||||| |||||||||  |||  |||||||||||||||||||||    
T  40719609 tttttgaccaatcaaaagagagaaaaccaaagttgtcataaaagttgtacgaaagagttgtacatatatcactactc 40719533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 10344434 - 10344513
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgt-atcaaatggttgtacatatatcactactcta 162  Q
    |||| |||||||||||||| || |||  ||  ||||||| |||||||| ||||||| | |||||||||||||||||||||    
T  10344434 tttttgaccaataaaaagaaagaaaaacaaggttgtcataaaagttgttatcaaatagatgtacatatatcactactcta 10344513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 154395 - 154473
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||| ||||||||||||||||| |||| ||| ||||||  | |||||| | || ||||||| || |||||||||||||    
T  154395 gtttttgaccaataaaaagagagaaaatgaaagttgtcacaatagttgtcttaattggttgttcaaatatcactactct 154473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 23258137 - 23258215
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||| ||||||| ||||||||| ||| | || ||||||  ||| |||| |||||||||||| || |||||||||||||    
T  23258137 gtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaaattgtttcaaatggttgttcaaatatcactactct 23258215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 39153649 - 39153571
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    |||| ||||||| ||||||||| |||| ||| || |||| |||||| ||  |||  |||||||||||||||||||||||    
T  39153649 tttttgaccaatcaaaagagagaaaatcaaagttatcatgaaagttatactaaagagttgtacatatatcactactcta 39153571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 5359443 - 5359520
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    ||||| ||||||||||||||||| ||| | | |||||||  |||||||| |||||| | ||| || ||||||||||||    
T  5359443 gtttttgaccaataaaaagagagaaaaaagagattgtcacaaaagttgtttcaaatagatgttcaaatatcactactc 5359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 5925193 - 5925238
Alignment:
Q  116 ttgtcatcaaagttgt-atcaaatggttgtacatatatcactactc 160  Q
    ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  5925193 ttgtcataaaagttgtcatcaaatggatgtacatatatcactactc 5925238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 161
Target Start/End: Complemental strand, 30925613 - 30925542
Alignment:
Q  90 accaataaaaagagagcaaataaaaattgtcatcaaa-gttgtatcaaatggttgtacatatatcactactct 161  Q
    |||||| ||||||||| ||| |||| |||||| |||| ||||||| |||||||||| || |||||||||||||    
T  30925613 accaatgaaaagagagaaaa-aaaagttgtcaccaaaagttgtataaaatggttgttcaaatatcactactct 30925542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 35819043 - 35819119
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    |||| ||||||| ||| |||||  ||| |||||||||||  |||||||| ||||  |||||||||| ||||||||||    
T  35819043 tttttgaccaatcaaatgagagacaatcaaaattgtcatagaagttgtaccaaaaagttgtacatagatcactactc 35819119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 158
Target Start/End: Complemental strand, 37562107 - 37562031
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgt-atcaaatggttgtacatatatcactac 158  Q
    ||||| ||||||||| ||||||| |||  ||  |||||||||||||||| ||||| ||| |||||| ||||||||||    
T  37562107 gtttttgaccaataagaagagagaaaaacaaggttgtcatcaaagttgtcatcaattggatgtacaaatatcactac 37562031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 42658741 - 42658789
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgt 131  Q
    |||||||||||||| |||| |||  ||||||| ||||||||||||||||    
T  42658741 gttttggaccaatagaaagggagtgaataaaagttgtcatcaaagttgt 42658789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 45101509 - 45101580
Alignment:
Q  91 ccaataaaaagagagcaaataaaaattgtcatcaaa-gttgtatcaaatggttgtacatatatcactactcta 162  Q
    ||||| ||||||||| ||| |||| |||||| |||| ||||||| |||||||||| || ||||||||||||||    
T  45101509 ccaatgaaaagagagaaaa-aaaagttgtcaccaaaagttgtatgaaatggttgttcaaatatcactactcta 45101580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 5e-22; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 30391251 - 30391328
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    ||||||||||||| | ||||||| |||||||| ||||||||||||||||| |||||| ||||||||||||||||||||    
T  30391251 gttttggaccaatgagaagagagtaaataaaagttgtcatcaaagttgtaccaaatgattgtacatatatcactactc 30391328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 17500802 - 17500881
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    ||||||||||||||| ||||||| |||| ||| || |||||||||||||  |||||||||||||||||||||||||||||    
T  17500802 gttttggaccaataagaagagagaaaatgaaagttatcatcaaagttgtcccaaatggttgtacatatatcactactcta 17500881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 17552412 - 17552333
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    ||||||||||||||| ||||||| |||| ||| || |||||||||||||  |||||||||||||||||||||||||||||    
T  17552412 gttttggaccaataagaagagagaaaatgaaagttatcatcaaagttgtcccaaatggttgtacatatatcactactcta 17552333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 83 - 159
Target Start/End: Original strand, 5724143 - 5724219
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactact 159  Q
    ||||||||||||| ||||||||| |||||||| |||||||| || |||| | |||||||||||||||||||||||||    
T  5724143 gttttggaccaatgaaaagagagaaaataaaagttgtcatccaatttgtcttaaatggttgtacatatatcactact 5724219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 36186860 - 36186782
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||||| || ||| |||||||| ||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||    
T  36186860 gttttgtactaatgaaaagagaacaaataaaagttgtcatcaaagttataccaaatggttgtacatatatcattactct 36186782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 47644814 - 47644891
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    ||||||||||||| | |||||||||||| ||| |||||||||||||| || |||||  ||||||||||||||||||||    
T  47644814 gttttggaccaatgagaagagagcaaatgaaagttgtcatcaaagttataccaaataattgtacatatatcactactc 47644891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 21153158 - 21153236
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    |||| ||||||| ||||||||| |||| ||| ||||||| ||||||||| ||||  |||||||||||||||||||||||    
T  21153158 tttttgaccaatcaaaagagagaaaatcaaagttgtcatgaaagttgtaccaaaaagttgtacatatatcactactcta 21153236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 84 - 161
Target Start/End: Original strand, 31436523 - 31436599
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||| ||||||| | ||||||  |||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  31436523 ttttagaccaatgagaagagataaaatgaaagttgtcatcaaa-ttgtatcaaatggttgtacatatatcactactct 31436599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 10014921 - 10014841
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgt-atcaaatggttgtacatatatcactactcta 162  Q
    ||||| ||||||||||||||||| |||  |||||||||| ||||||||| ||||| ||| |||||| ||||||||||||||    
T  10014921 gtttttgaccaataaaaagagagaaaaacaaaattgtcaccaaagttgtcatcaattggatgtacaaatatcactactcta 10014841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 49089129 - 49089053
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    |||||||||||| | ||||||| |||| ||| ||||||||||||||||   |||| |||||||||||||||||||||    
T  49089129 ttttggaccaatgagaagagagaaaatgaaagttgtcatcaaagttgtcagaaattgttgtacatatatcactactc 49089053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 27070635 - 27070556
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    ||||||||||||| | ||||||| |||| | | ||||||||||||||||  |||||| ||| ||||||||||||||||||    
T  27070635 gttttggaccaatgagaagagagaaaatgagagttgtcatcaaagttgtcccaaatgattgcacatatatcactactcta 27070556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 27207678 - 27207757
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactcta 162  Q
    ||||||||||||| | ||||||| |||| | | ||||||||||||||||  |||||| ||| ||||||||||||||||||    
T  27207678 gttttggaccaatgagaagagagaaaatgagagttgtcatcaaagttgtcccaaatgattgcacatatatcactactcta 27207757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 37351956 - 37351878
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||| ||||||||||||||||| ||| | |||||||||  |||||| ||||||||| |||| || |||||||||||||    
T  37351956 gtttttgaccaataaaaagagagaaaaaagaaattgtcacaaaagttatatcaaatgattgttcaaatatcactactct 37351878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 12141989 - 12142066
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    ||||| ||||||| |||||| || ||| |||| ||||||  ||||||||||||||||||||| || ||||||||||||    
T  12141989 gtttttgaccaatgaaaagaaagaaaaaaaaagttgtcacaaaagttgtatcaaatggttgttcaaatatcactactc 12142066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 154
Target Start/End: Complemental strand, 24267613 - 24267542
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatca 154  Q
    |||||||||||||| ||| |||| |||||||| ||||||||||||||||   | ||||||||||| ||||||    
T  24267613 gttttggaccaatagaaaaagagtaaataaaagttgtcatcaaagttgttagatatggttgtacaaatatca 24267542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 5978684 - 5978761
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    ||||| ||||||| ||||||||| ||||| || ||||||  | |||||||||| |||||||| || ||||||||||||    
T  5978684 gtttttgaccaatgaaaagagagaaaatagaagttgtcacaagagttgtatcatatggttgttcaaatatcactactc 5978761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 161
Target Start/End: Original strand, 36920891 - 36920968
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||| ||||||| ||| ||||| |||| ||| |||| || ||||||||| ||||  ||||||||||||||||||||||    
T  36920891 tttttgaccaatcaaatgagagaaaatcaaagttgtaataaaagttgtaccaaagagttgtacatatatcactactct 36920968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 43445518 - 43445590
Alignment:
Q  89 gaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||||||||||||| || ||| | |||||||||  ||| |||||||||||| |||| || |||||||||||||    
T  43445518 gaccaataaaaagaaagaaaaaagaaattgtcacaaaaattgtatcaaatgattgttcaaatatcactactct 43445590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 44196179 - 44196131
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgt 131  Q
    |||||||||||||| |||||| | |||||||| ||||||||||||||||    
T  44196179 gttttggaccaatagaaagagcgtaaataaaagttgtcatcaaagttgt 44196131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 47424944 - 47424877
Alignment:
Q  90 accaataaaaagagagcaaataaaaattgtcatc-aaagttgtatcaaatggttgtacatatatcacta 157  Q
    |||||||||||||||| ||| ||||||||||| | |||||||||| |||||||||| || |||||||||    
T  47424944 accaataaaaagagaggaaa-aaaaattgtcaccaaaagttgtatgaaatggttgttcaaatatcacta 47424877  T

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Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 27075574 - 27075644
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatca 154  Q
    |||| ||||||| ||||||||| |||  |||||| |||| ||||||||| ||||  |||||||||||||||    
T  27075574 tttttgaccaatcaaaagagagaaaaccaaaattatcataaaagttgtaccaaagagttgtacatatatca 27075644  T

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Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 27202737 - 27202667
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatca 154  Q
    |||| ||||||| ||||||||| |||  |||||| |||| ||||||||| ||||  |||||||||||||||    
T  27202737 tttttgaccaatcaaaagagagaaaaccaaaattatcataaaagttgtaccaaagagttgtacatatatca 27202667  T

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Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 27330969 - 27330915
Alignment:
Q  107 aaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||| |||||| |||| ||||||||| ||||  ||||||||||||||||||||||    
T  27330969 aaattaaaattatcatgaaagttgtaccaaagagttgtacatatatcactactct 27330915  T

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Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 46651777 - 46651855
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||| ||||||| ||||||||| ||||| || ||||||  | | |||||||| |||||||| || |||||||||||||    
T  46651777 gtttttgaccaatgaaaagagagaaaatagaagttgtcacaagaattgtatcatatggttgttcaaatatcactactct 46651855  T

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Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 31009606 - 31009529
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    ||||||||||||||  ||||||| |||||||| ||||||  ||||||||   | ||||||||||| ||||||| ||||    
T  31009606 gttttggaccaataggaagagagtaaataaaagttgtcactaaagttgttagatatggttgtacaaatatcacaactc 31009529  T

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Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 18067890 - 18067814
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    ||||| |||||||  ||||||| |||||||| ||||||||||||||||   | || |||||||| ||||||| ||||    
T  18067890 ttttgaaccaataggaagagagtaaataaaagttgtcatcaaagttgttagatatagttgtacaaatatcacaactc 18067814  T

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Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 33212132 - 33212208
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    |||| ||||||| ||| |||||  ||| ||| |||||||  |||||||| ||||  |||||||||||||||||||||    
T  33212132 tttttgaccaatcaaatgagagacaattaaagttgtcatagaagttgtaccaaagagttgtacatatatcactactc 33212208  T

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Target: scaffold0072 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 14515 - 14437
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||||||| | |||||| ||||| |||||||||| |||||||||| ||||||| ||||||||||||||||||||    
T  14515 gttttggaccaatgagaagagaacaaattaaaattgtcaacaaagttgtaccaaatggatgtacatatatcactactct 14437  T

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Target: scaffold0020 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 156011 - 156089
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||||||| | ||||||| |||| | | ||||||||||||||||  ||||||||||||||||||||||||||||    
T  156011 gttttggaccaatgagaagagagaaaatgagagttgtcatcaaagttgtcccaaatggttgtacatatatcactactct 156089  T

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Target: scaffold0154 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 4425 - 4493
Alignment:
Q  89 gaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcacta 157  Q
    ||||||| ||||||||| |||||| | ||||||||||||||||  | ||||||||||||||||||||||    
T  4425 gaccaatgaaaagagagaaaataatagttgtcatcaaagttgtcaccaatggttgtacatatatcacta 4493  T

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Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 156
Target Start/End: Original strand, 92054 - 92126
Alignment:
Q  84 ttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcact 156  Q
    |||| ||||||| ||||||||| ||| |||||||||||| ||| ||||||||||  |||||||||||||||||    
T  92054 tttttgaccaatcaaaagagagaaaacaaaaattgtcataaaaattgtatcaaagagttgtacatatatcact 92126  T

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Target: scaffold0057 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 154
Target Start/End: Complemental strand, 21540 - 21469
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatca 154  Q
    ||||||||||||| | ||||||| |||| ||| |||| |||||||||||  |||||| ||||||||||||||    
T  21540 gttttggaccaatgagaagagagaaaatgaaagttgttatcaaagttgtcacaaatgattgtacatatatca 21469  T

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Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 18116 - 18186
Alignment:
Q  90 accaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    |||||| ||||||||| ||| |||| ||||||| ||||||||||||||| ||||| || |||||||||||||    
T  18116 accaatgaaaagagagaaaa-aaaagttgtcataaaagttgtatcaaatagttgttcaaatatcactactct 18186  T

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Target: scaffold0194 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 157
Target Start/End: Complemental strand, 29776 - 29702
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcacta 157  Q
    ||||||||||||| ||||||||| |||| ||| ||||||||||||||||  |||||| || || ||| |||||||    
T  29776 gttttggaccaatgaaaagagagaaaatgaaagttgtcatcaaagttgtcccaaatgattatatatacatcacta 29702  T

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Target: scaffold0238 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 16500 - 16574
Alignment:
Q  87 tggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||| | || |||| |||||||| |||||| |||||||||   ||||||||||  |||||||||||||||    
T  16500 tggaccaatgagaatagagaaaataaaagttgtcaacaaagttgtcataaatggttgtcaatatatcactactct 16574  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 117
Target Start/End: Original strand, 199371 - 199405
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaatt 117  Q
    ||||||||||||||||||||||| |||||||||||    
T  199371 gttttggaccaataaaaagagagaaaataaaaatt 199405  T

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Target: scaffold0511 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 11743 - 11820
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    |||||| ||||||| |||||||| |||||||| ||||||| ||| ||||   | ||||||||||| ||||||| ||||    
T  11743 gttttgaaccaatagaaagagagtaaataaaagttgtcattaaaattgttagatatggttgtacaaatatcacaactc 11820  T

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Target: scaffold0111 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 36834 - 36757
Alignment:
Q  83 gttttggaccaataaaaagagagcaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactc 160  Q
    ||||||||||||| | ||||||| |||||||| |||||| |||||||||   ||||| ||||  |||||||| |||||    
T  36834 gttttggaccaatgagaagagagaaaataaaagttgtcaacaaagttgtcaaaaatgattgtcaatatatcaatactc 36757  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 36148 - 36185
Alignment:
Q  124 aaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||||||||||||||||| || |||||||||||||    
T  36148 aaagttgtatcaaatggttgttcaaatatcactactct 36185  T

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Target: scaffold0204 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 27451 - 27523
Alignment:
Q  90 accaataaaaagagagcaaataaaaattgtca-tcaaagttgtatcaaatggttgtacatatatcactactct 161  Q
    ||||||| |||||||| ||| | ||||||||| | ||| |||||| |||||||||| || |||||||||||||    
T  27451 accaatagaaagagagaaaaaagaaattgtcactaaaaattgtatgaaatggttgttcaaatatcactactct 27523  T

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