View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18412_high_45 (Length: 259)

Name: NF18412_high_45
Description: NF18412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18412_high_45
NF18412_high_45
[»] chr1 (64 HSPs)
chr1 (47-240)||(11877051-11877244)
chr1 (17-186)||(25032746-25032920)
chr1 (47-177)||(28677791-28677921)
chr1 (21-181)||(42491186-42491342)
chr1 (47-181)||(27535036-27535166)
chr1 (49-181)||(10304904-10305036)
chr1 (47-177)||(29205607-29205737)
chr1 (47-177)||(44517487-44517617)
chr1 (47-177)||(13969306-13969430)
chr1 (47-186)||(42276694-42276833)
chr1 (47-177)||(15390904-15391034)
chr1 (48-177)||(4882029-4882157)
chr1 (47-131)||(15312325-15312409)
chr1 (47-181)||(37822011-37822145)
chr1 (44-181)||(32879029-32879166)
chr1 (58-175)||(33486690-33486807)
chr1 (49-177)||(51418325-51418453)
chr1 (98-181)||(30678629-30678712)
chr1 (47-181)||(33177260-33177388)
chr1 (47-177)||(15790928-15791057)
chr1 (18-94)||(13999251-13999328)
chr1 (57-181)||(33938693-33938816)
chr1 (49-179)||(34659305-34659429)
chr1 (18-120)||(40862543-40862650)
chr1 (47-177)||(32784418-32784548)
chr1 (44-178)||(11121297-11121425)
chr1 (44-177)||(12871942-12872075)
chr1 (48-177)||(14265624-14265752)
chr1 (44-181)||(50107577-50107713)
chr1 (47-175)||(3233110-3233238)
chr1 (47-174)||(13691432-13691553)
chr1 (58-170)||(29938550-29938662)
chr1 (48-108)||(44513731-44513791)
chr1 (49-108)||(7995298-7995357)
chr1 (47-181)||(13488184-13488318)
chr1 (47-101)||(34567005-34567059)
chr1 (44-177)||(46589469-46589596)
chr1 (44-86)||(47392457-47392499)
chr1 (43-175)||(8893612-8893738)
chr1 (47-108)||(15276175-15276236)
chr1 (48-108)||(26199905-26199965)
chr1 (44-175)||(26771427-26771552)
chr1 (44-88)||(29067368-29067412)
chr1 (54-177)||(1141025-1141147)
chr1 (44-175)||(9298085-9298216)
chr1 (98-177)||(16141001-16141080)
chr1 (49-112)||(25278561-25278624)
chr1 (44-87)||(33125562-33125605)
chr1 (44-110)||(20413119-20413185)
chr1 (47-173)||(26097689-26097814)
chr1 (44-81)||(424040-424077)
chr1 (47-84)||(2350946-2350983)
chr1 (140-177)||(13152859-13152896)
chr1 (47-108)||(28213377-28213438)
chr1 (47-84)||(29726342-29726379)
chr1 (47-108)||(33703239-33703300)
chr1 (47-108)||(44562478-44562539)
chr1 (49-174)||(45750819-45750944)
chr1 (47-99)||(5701446-5701498)
chr1 (49-93)||(13144680-13144724)
chr1 (125-173)||(28666475-28666523)
chr1 (126-186)||(30853604-30853664)
chr1 (49-101)||(36621677-36621729)
chr1 (47-83)||(52839854-52839890)
[»] chr5 (69 HSPs)
chr5 (38-181)||(32309826-32309969)
chr5 (17-181)||(42505061-42505228)
chr5 (47-177)||(17095893-17096023)
chr5 (47-177)||(26293949-26294079)
chr5 (44-177)||(39179497-39179630)
chr5 (49-181)||(20483527-20483659)
chr5 (47-177)||(11734497-11734627)
chr5 (47-177)||(17699892-17700022)
chr5 (44-186)||(42781337-42781479)
chr5 (44-177)||(6635584-6635717)
chr5 (48-175)||(6281384-6281511)
chr5 (47-177)||(6681529-6681659)
chr5 (47-181)||(7771469-7771603)
chr5 (47-177)||(17331667-17331797)
chr5 (47-181)||(26294722-26294856)
chr5 (47-177)||(33164121-33164251)
chr5 (47-181)||(42396158-42396292)
chr5 (44-181)||(7151132-7151269)
chr5 (48-176)||(15710869-15710991)
chr5 (44-177)||(23881768-23881901)
chr5 (47-175)||(177758-177886)
chr5 (47-158)||(2555021-2555132)
chr5 (44-107)||(20271035-20271098)
chr5 (47-177)||(17732039-17732168)
chr5 (47-181)||(18654121-18654255)
chr5 (47-181)||(32347371-32347505)
chr5 (71-181)||(34431427-34431537)
chr5 (50-174)||(3740673-3740798)
chr5 (44-101)||(28501010-28501067)
chr5 (47-174)||(27241394-27241521)
chr5 (47-177)||(13161684-13161814)
chr5 (136-181)||(13677513-13677558)
chr5 (44-93)||(39591369-39591418)
chr5 (44-108)||(8957527-8957591)
chr5 (47-99)||(11976797-11976849)
chr5 (44-108)||(19645765-19645829)
chr5 (44-87)||(32387785-32387828)
chr5 (47-181)||(37219327-37219454)
chr5 (126-181)||(39531056-39531111)
chr5 (50-131)||(6012759-6012840)
chr5 (140-181)||(9196679-9196720)
chr5 (46-99)||(16981476-16981529)
chr5 (44-101)||(32390400-32390457)
chr5 (47-108)||(41554811-41554872)
chr5 (47-107)||(3079056-3079116)
chr5 (18-101)||(25962209-25962297)
chr5 (1-166)||(29098071-29098238)
chr5 (49-181)||(31254923-31255052)
chr5 (47-170)||(28040968-28041091)
chr5 (48-177)||(5378627-5378750)
chr5 (56-189)||(11647532-11647665)
chr5 (44-94)||(15571089-15571139)
chr5 (47-133)||(42609483-42609569)
chr5 (44-101)||(2415723-2415780)
chr5 (47-108)||(6074465-6074526)
chr5 (47-108)||(6647642-6647703)
chr5 (47-108)||(33486298-33486359)
chr5 (112-173)||(39415923-39415984)
chr5 (44-117)||(40564877-40564950)
chr5 (47-84)||(43494213-43494250)
chr5 (44-84)||(12439434-12439474)
chr5 (47-87)||(13422107-13422147)
chr5 (48-108)||(18472455-18472515)
chr5 (57-129)||(19048356-19048428)
chr5 (40-84)||(26240438-26240482)
chr5 (44-108)||(29154541-29154605)
chr5 (47-87)||(34866755-34866795)
chr5 (126-186)||(40775158-40775218)
chr5 (47-99)||(43148912-43148964)
[»] chr6 (49 HSPs)
chr6 (44-181)||(12653966-12654103)
chr6 (47-181)||(8693319-8693453)
chr6 (47-177)||(30813396-30813526)
chr6 (47-181)||(19402500-19402634)
chr6 (44-177)||(2488458-2488591)
chr6 (1-177)||(12481031-12481209)
chr6 (47-177)||(6295901-6296031)
chr6 (47-177)||(6302711-6302841)
chr6 (47-177)||(15589777-15589907)
chr6 (48-173)||(14730945-14731070)
chr6 (47-177)||(23654589-23654718)
chr6 (44-177)||(4660764-4660897)
chr6 (48-177)||(31705505-31705634)
chr6 (47-181)||(23101056-23101190)
chr6 (47-177)||(4394109-4394239)
chr6 (44-177)||(8644549-8644676)
chr6 (47-177)||(21507506-21507636)
chr6 (47-177)||(35219565-35219695)
chr6 (44-175)||(29920571-29920702)
chr6 (49-177)||(14782807-14782935)
chr6 (43-107)||(15127860-15127924)
chr6 (48-120)||(35039016-35039088)
chr6 (44-131)||(8978454-8978541)
chr6 (47-181)||(20496517-20496645)
chr6 (47-181)||(31680759-31680894)
chr6 (47-181)||(5416887-5417014)
chr6 (47-177)||(6127856-6127986)
chr6 (60-177)||(21942093-21942210)
chr6 (18-111)||(28943559-28943652)
chr6 (46-117)||(892607-892678)
chr6 (47-177)||(2304490-2304620)
chr6 (49-186)||(4663477-4663608)
chr6 (44-101)||(548608-548665)
chr6 (47-108)||(31748281-31748342)
chr6 (48-100)||(13871354-13871406)
chr6 (61-177)||(31936285-31936401)
chr6 (44-108)||(34020924-34020988)
chr6 (90-177)||(5146308-5146395)
chr6 (44-99)||(12059615-12059670)
chr6 (44-99)||(25064416-25064471)
chr6 (59-177)||(23637774-23637892)
chr6 (136-186)||(29285150-29285200)
chr6 (44-77)||(7049566-7049599)
chr6 (140-181)||(31804625-31804666)
chr6 (149-181)||(5084976-5085008)
chr6 (47-99)||(7880944-7880996)
chr6 (44-76)||(13233869-13233901)
chr6 (44-76)||(20845329-20845361)
chr6 (47-87)||(29285073-29285113)
[»] chr4 (86 HSPs)
chr4 (44-177)||(42197889-42198022)
chr4 (47-177)||(45350722-45350852)
chr4 (47-177)||(45360201-45360331)
chr4 (50-177)||(43244033-43244160)
chr4 (47-177)||(393926-394056)
chr4 (44-177)||(27091044-27091177)
chr4 (47-186)||(31522285-31522424)
chr4 (47-181)||(477669-477803)
chr4 (47-181)||(7083469-7083603)
chr4 (48-177)||(6912020-6912149)
chr4 (46-175)||(7060652-7060781)
chr4 (47-181)||(7084279-7084415)
chr4 (18-186)||(56236474-56236647)
chr4 (47-175)||(626213-626341)
chr4 (57-181)||(41837663-41837787)
chr4 (47-186)||(18502485-18502624)
chr4 (50-177)||(36124009-36124136)
chr4 (47-177)||(13965882-13966012)
chr4 (47-177)||(20887409-20887539)
chr4 (48-174)||(31932587-31932713)
chr4 (18-173)||(38943813-38943973)
chr4 (56-176)||(44756692-44756812)
chr4 (39-186)||(56172144-56172291)
chr4 (48-181)||(4959236-4959363)
chr4 (44-181)||(8712843-8712981)
chr4 (48-177)||(8517111-8517240)
chr4 (44-181)||(11209961-11210098)
chr4 (48-181)||(37431496-37431629)
chr4 (47-181)||(2945462-2945590)
chr4 (47-158)||(7860880-7860991)
chr4 (47-174)||(39837933-39838060)
chr4 (44-175)||(46268002-46268132)
chr4 (47-177)||(29266556-29266685)
chr4 (44-110)||(29589088-29589154)
chr4 (47-181)||(55600194-55600328)
chr4 (48-177)||(3159302-3159431)
chr4 (44-181)||(3171272-3171408)
chr4 (64-177)||(6882300-6882413)
chr4 (49-177)||(5814672-5814800)
chr4 (47-175)||(30202377-30202505)
chr4 (44-108)||(43157098-43157162)
chr4 (44-108)||(46829728-46829792)
chr4 (47-110)||(47466241-47466304)
chr4 (48-181)||(12716780-12716913)
chr4 (47-108)||(29474057-29474118)
chr4 (57-177)||(24611450-24611570)
chr4 (47-110)||(6082158-6082221)
chr4 (44-158)||(20399573-20399688)
chr4 (47-177)||(46728586-46728710)
chr4 (47-101)||(22757424-22757478)
chr4 (48-110)||(28990623-28990685)
chr4 (48-186)||(40198200-40198333)
chr4 (47-112)||(3673812-3673877)
chr4 (140-181)||(24826071-24826112)
chr4 (140-181)||(38435009-38435050)
chr4 (48-100)||(6789614-6789666)
chr4 (47-99)||(11299872-11299924)
chr4 (44-108)||(19885695-19885759)
chr4 (51-107)||(26576233-26576289)
chr4 (47-107)||(30416358-30416418)
chr4 (47-181)||(32616510-32616641)
chr4 (44-108)||(33020656-33020720)
chr4 (44-76)||(37869178-37869210)
chr4 (47-99)||(44947607-44947659)
chr4 (48-108)||(50981443-50981503)
chr4 (47-107)||(51646421-51646481)
chr4 (44-87)||(4622453-4622496)
chr4 (126-177)||(14346828-14346879)
chr4 (48-83)||(22049165-22049200)
chr4 (47-177)||(25658506-25658630)
chr4 (136-179)||(31891063-31891106)
chr4 (49-108)||(52555469-52555528)
chr4 (47-186)||(53647945-53648089)
chr4 (48-94)||(26674703-26674749)
chr4 (136-177)||(18936068-18936109)
chr4 (136-181)||(42914795-42914840)
chr4 (140-181)||(44374937-44374978)
chr4 (47-84)||(51152454-51152491)
chr4 (47-99)||(5388837-5388889)
chr4 (44-120)||(15182795-15182871)
chr4 (48-108)||(16992197-16992257)
chr4 (97-181)||(19745779-19745863)
chr4 (97-181)||(19793943-19794027)
chr4 (52-88)||(43853643-43853679)
chr4 (48-108)||(54420469-54420529)
chr4 (141-181)||(56335860-56335900)
[»] chr2 (95 HSPs)
chr2 (44-181)||(29543129-29543266)
chr2 (47-181)||(20560781-20560915)
chr2 (47-181)||(35333844-35333978)
chr2 (47-177)||(12890769-12890899)
chr2 (47-177)||(33012387-33012517)
chr2 (48-177)||(4739669-4739798)
chr2 (44-177)||(11798190-11798322)
chr2 (47-174)||(5754621-5754748)
chr2 (47-177)||(13878661-13878791)
chr2 (47-177)||(14018786-14018916)
chr2 (47-177)||(27096028-27096158)
chr2 (1-181)||(4732352-4732535)
chr2 (47-174)||(44942625-44942752)
chr2 (47-181)||(12705025-12705159)
chr2 (47-186)||(18089055-18089196)
chr2 (47-177)||(25068180-25068310)
chr2 (44-181)||(28261553-28261690)
chr2 (47-177)||(9978330-9978460)
chr2 (47-177)||(11937518-11937648)
chr2 (47-177)||(16136417-16136547)
chr2 (44-186)||(20570294-20570436)
chr2 (47-177)||(38384118-38384248)
chr2 (49-179)||(40038973-40039103)
chr2 (49-185)||(11942709-11942846)
chr2 (47-174)||(31908472-31908599)
chr2 (47-174)||(38534960-38535086)
chr2 (44-159)||(44589208-44589323)
chr2 (47-101)||(11931196-11931250)
chr2 (47-177)||(34416415-34416545)
chr2 (47-177)||(36868347-36868477)
chr2 (48-177)||(4703471-4703600)
chr2 (44-177)||(9689637-9689770)
chr2 (44-120)||(11561396-11561472)
chr2 (47-102)||(5071105-5071160)
chr2 (58-177)||(13113361-13113480)
chr2 (44-181)||(106576-106714)
chr2 (47-177)||(17267778-17267908)
chr2 (49-171)||(17792799-17792920)
chr2 (48-158)||(33839068-33839178)
chr2 (47-177)||(43473797-43473927)
chr2 (47-177)||(43696207-43696337)
chr2 (47-108)||(25622773-25622834)
chr2 (48-181)||(28230745-28230878)
chr2 (48-181)||(32015593-32015726)
chr2 (47-132)||(41797934-41798019)
chr2 (47-178)||(13548570-13548702)
chr2 (48-108)||(35353965-35354025)
chr2 (50-173)||(10286670-10286793)
chr2 (47-177)||(15920198-15920322)
chr2 (47-181)||(13740302-13740436)
chr2 (48-177)||(27665875-27666005)
chr2 (47-186)||(34471299-34471434)
chr2 (44-102)||(34480286-34480344)
chr2 (47-181)||(34962643-34962777)
chr2 (44-109)||(3397707-3397772)
chr2 (47-108)||(4878465-4878526)
chr2 (47-108)||(7640085-7640146)
chr2 (47-84)||(25237084-25237121)
chr2 (47-108)||(36508253-36508314)
chr2 (44-108)||(9715273-9715337)
chr2 (57-101)||(14825895-14825939)
chr2 (48-108)||(19580731-19580791)
chr2 (47-107)||(22597474-22597534)
chr2 (126-177)||(3527404-3527455)
chr2 (44-99)||(4228307-4228362)
chr2 (44-131)||(4615260-4615347)
chr2 (18-84)||(7072719-7072790)
chr2 (44-99)||(9986184-9986239)
chr2 (44-99)||(17319504-17319559)
chr2 (126-177)||(26491698-26491749)
chr2 (44-83)||(31262707-31262746)
chr2 (47-177)||(32314764-32314894)
chr2 (47-110)||(41177182-41177245)
chr2 (47-77)||(2278792-2278822)
chr2 (53-99)||(6174009-6174055)
chr2 (44-94)||(17118557-17118607)
chr2 (136-181)||(24461704-24461750)
chr2 (44-101)||(3465250-3465307)
chr2 (47-108)||(3603309-3603370)
chr2 (47-108)||(15673698-15673758)
chr2 (51-92)||(17767315-17767356)
chr2 (47-84)||(30933572-30933609)
chr2 (52-181)||(32711875-32712004)
chr2 (47-108)||(37883977-37884038)
chr2 (57-110)||(40125719-40125772)
chr2 (140-181)||(40125796-40125837)
chr2 (47-108)||(43929029-43929090)
chr2 (44-88)||(8809461-8809505)
chr2 (47-107)||(10589419-10589478)
chr2 (48-108)||(13268897-13268957)
chr2 (44-80)||(19382204-19382240)
chr2 (47-83)||(23256384-23256420)
chr2 (47-99)||(27248993-27249045)
chr2 (47-99)||(30420856-30420908)
chr2 (47-99)||(40659774-40659826)
[»] chr3 (78 HSPs)
chr3 (47-175)||(2192417-2192545)
chr3 (47-177)||(13701662-13701792)
chr3 (47-177)||(48855216-48855346)
chr3 (18-177)||(30155950-30156114)
chr3 (47-177)||(24483356-24483486)
chr3 (47-177)||(40012932-40013062)
chr3 (44-181)||(3457258-3457395)
chr3 (49-177)||(33637735-33637863)
chr3 (47-186)||(14585801-14585940)
chr3 (44-174)||(32080426-32080556)
chr3 (47-181)||(41867989-41868122)
chr3 (47-177)||(55455201-55455331)
chr3 (1-177)||(105708-105888)
chr3 (47-164)||(4082047-4082164)
chr3 (58-187)||(31270659-31270788)
chr3 (47-175)||(38530263-38530392)
chr3 (57-181)||(53155086-53155210)
chr3 (49-177)||(55090359-55090487)
chr3 (47-174)||(1074557-1074684)
chr3 (52-175)||(48401436-48401559)
chr3 (43-173)||(11225668-11225798)
chr3 (44-174)||(40883538-40883668)
chr3 (47-177)||(11819421-11819553)
chr3 (48-177)||(48652109-48652238)
chr3 (44-108)||(27831420-27831484)
chr3 (61-181)||(38379410-38379530)
chr3 (47-175)||(54706394-54706522)
chr3 (47-181)||(31462410-31462545)
chr3 (47-181)||(49627760-49627894)
chr3 (18-174)||(3961445-3961606)
chr3 (48-177)||(55446388-55446517)
chr3 (47-179)||(2148079-2148210)
chr3 (47-181)||(22485304-22485439)
chr3 (47-181)||(34960585-34960718)
chr3 (47-181)||(36623919-36624052)
chr3 (43-181)||(42167717-42167855)
chr3 (47-177)||(3312766-3312892)
chr3 (44-101)||(40365545-40365602)
chr3 (49-174)||(41598139-41598264)
chr3 (57-169)||(4817548-4817660)
chr3 (44-108)||(25373823-25373887)
chr3 (44-181)||(35175044-35175176)
chr3 (47-177)||(39610549-39610675)
chr3 (43-87)||(48212648-48212692)
chr3 (44-107)||(4019919-4019982)
chr3 (51-181)||(25939158-25939282)
chr3 (47-110)||(33977652-33977715)
chr3 (21-107)||(47587103-47587194)
chr3 (44-175)||(50981128-50981259)
chr3 (44-175)||(51084262-51084393)
chr3 (47-101)||(43839253-43839307)
chr3 (47-177)||(45047836-45047966)
chr3 (48-102)||(50460515-50460569)
chr3 (48-177)||(19645531-19645659)
chr3 (47-108)||(28995038-28995099)
chr3 (44-84)||(22844373-22844413)
chr3 (44-108)||(29776419-29776483)
chr3 (44-108)||(30648552-30648616)
chr3 (46-110)||(42106461-42106525)
chr3 (44-175)||(36691461-36691592)
chr3 (44-175)||(51059991-51060122)
chr3 (47-174)||(53402960-53403087)
chr3 (48-94)||(32237739-32237785)
chr3 (136-181)||(35175657-35175703)
chr3 (44-94)||(50520104-50520154)
chr3 (18-83)||(53962408-53962478)
chr3 (47-100)||(913053-913106)
chr3 (136-181)||(16235691-16235736)
chr3 (61-177)||(19148328-19148445)
chr3 (136-181)||(27706004-27706049)
chr3 (47-108)||(31730951-31731011)
chr3 (48-109)||(33794082-33794143)
chr3 (47-84)||(34103510-34103547)
chr3 (48-181)||(44984521-44984654)
chr3 (47-99)||(25631368-25631420)
chr3 (44-100)||(40797354-40797410)
chr3 (52-108)||(48401180-48401236)
chr3 (47-99)||(50194197-50194249)
[»] chr7 (95 HSPs)
chr7 (47-186)||(39532618-39532757)
chr7 (1-181)||(45482346-45482525)
chr7 (44-187)||(4621022-4621165)
chr7 (18-177)||(5238242-5238403)
chr7 (47-177)||(21991001-21991131)
chr7 (44-177)||(36253266-36253399)
chr7 (49-177)||(6667736-6667864)
chr7 (47-177)||(41288295-41288425)
chr7 (47-172)||(32643307-32643432)
chr7 (44-181)||(37593419-37593556)
chr7 (44-177)||(46025707-46025840)
chr7 (47-175)||(11833357-11833485)
chr7 (47-177)||(9785656-9785786)
chr7 (47-177)||(45457208-45457338)
chr7 (47-180)||(21603797-21603930)
chr7 (57-186)||(44482521-44482650)
chr7 (18-177)||(32741048-32741212)
chr7 (44-181)||(3266713-3266847)
chr7 (47-170)||(22747168-22747291)
chr7 (47-173)||(42603435-42603561)
chr7 (47-181)||(48304040-48304174)
chr7 (49-181)||(1280785-1280917)
chr7 (44-176)||(37375709-37375840)
chr7 (47-167)||(42644994-42645114)
chr7 (51-181)||(7765525-7765656)
chr7 (79-170)||(20206157-20206248)
chr7 (44-175)||(27535764-27535894)
chr7 (57-181)||(39989837-39989963)
chr7 (47-177)||(17508856-17508986)
chr7 (47-177)||(17544228-17544358)
chr7 (47-181)||(36578989-36579123)
chr7 (44-177)||(2622928-2623061)
chr7 (47-108)||(21329027-21329088)
chr7 (47-180)||(24319872-24320005)
chr7 (50-175)||(31254785-31254910)
chr7 (50-177)||(9137733-9137861)
chr7 (57-181)||(26161304-26161427)
chr7 (51-181)||(32587190-32587317)
chr7 (18-181)||(37714769-37714937)
chr7 (44-108)||(47156706-47156770)
chr7 (44-175)||(9137277-9137407)
chr7 (62-181)||(39707622-39707741)
chr7 (48-178)||(38273229-38273359)
chr7 (57-186)||(17473404-17473533)
chr7 (57-186)||(17579681-17579810)
chr7 (47-88)||(22751726-22751767)
chr7 (47-108)||(28015681-28015742)
chr7 (48-101)||(35141399-35141452)
chr7 (47-167)||(36719222-36719343)
chr7 (59-175)||(10624134-10624249)
chr7 (49-101)||(39544776-39544828)
chr7 (47-158)||(5684694-5684805)
chr7 (47-158)||(5709744-5709855)
chr7 (49-116)||(17230444-17230511)
chr7 (47-177)||(26017324-26017448)
chr7 (38-72)||(5654940-5654974)
chr7 (57-175)||(15674017-15674135)
chr7 (51-181)||(28664604-28664734)
chr7 (44-94)||(35134944-35134994)
chr7 (57-170)||(6622733-6622846)
chr7 (136-181)||(35133215-35133260)
chr7 (47-108)||(38649087-38649148)
chr7 (47-108)||(46918723-46918784)
chr7 (21-117)||(47300589-47300690)
chr7 (44-108)||(5024785-5024849)
chr7 (47-175)||(21954487-21954615)
chr7 (58-181)||(33901975-33902099)
chr7 (44-107)||(43483909-43483971)
chr7 (44-94)||(7640622-7640672)
chr7 (104-186)||(15017096-15017178)
chr7 (49-83)||(23274329-23274363)
chr7 (49-83)||(23274411-23274445)
chr7 (49-83)||(23274493-23274527)
chr7 (49-83)||(23274575-23274609)
chr7 (49-83)||(23303801-23303835)
chr7 (47-81)||(27704833-27704867)
chr7 (140-178)||(38277229-38277267)
chr7 (44-94)||(44681781-44681831)
chr7 (47-93)||(45349667-45349713)
chr7 (44-117)||(7986213-7986286)
chr7 (140-177)||(17222528-17222565)
chr7 (48-117)||(21552175-21552244)
chr7 (44-169)||(24988160-24988285)
chr7 (47-108)||(29804408-29804469)
chr7 (136-181)||(33095784-33095829)
chr7 (47-84)||(34594275-34594312)
chr7 (140-181)||(34893518-34893559)
chr7 (140-181)||(35544809-35544850)
chr7 (68-133)||(38338879-38338944)
chr7 (44-93)||(40993331-40993380)
chr7 (140-177)||(48643478-48643515)
chr7 (44-108)||(772764-772828)
chr7 (59-174)||(8180151-8180267)
chr7 (44-76)||(43098898-43098930)
chr7 (44-88)||(46818271-46818315)
[»] chr8 (71 HSPs)
chr8 (49-179)||(37612977-37613107)
chr8 (47-175)||(2968854-2968982)
chr8 (48-175)||(13575871-13575998)
chr8 (47-181)||(43936836-43936970)
chr8 (42-177)||(13570427-13570562)
chr8 (47-177)||(14600358-14600488)
chr8 (49-177)||(24790830-24790956)
chr8 (47-177)||(7579515-7579645)
chr8 (47-177)||(9501908-9502037)
chr8 (44-186)||(10148272-10148414)
chr8 (47-181)||(28296771-28296905)
chr8 (47-175)||(4757487-4757615)
chr8 (47-177)||(2024884-2025014)
chr8 (44-177)||(2234130-2234263)
chr8 (44-181)||(5526138-5526275)
chr8 (44-177)||(11162222-11162355)
chr8 (44-101)||(12243952-12244009)
chr8 (44-181)||(23970844-23970976)
chr8 (48-177)||(24700175-24700303)
chr8 (48-177)||(30026542-30026671)
chr8 (57-177)||(31202798-31202917)
chr8 (52-171)||(7256476-7256594)
chr8 (47-177)||(39067350-39067480)
chr8 (44-101)||(18994203-18994260)
chr8 (57-186)||(21471895-21472024)
chr8 (44-108)||(18190580-18190644)
chr8 (49-181)||(550670-550802)
chr8 (47-120)||(10338548-10338621)
chr8 (48-164)||(4928253-4928369)
chr8 (37-181)||(10951953-10952096)
chr8 (37-181)||(10959958-10960101)
chr8 (44-108)||(41996864-41996928)
chr8 (49-158)||(23422149-23422258)
chr8 (47-173)||(26673446-26673572)
chr8 (51-181)||(35778761-35778891)
chr8 (140-177)||(2629324-2629361)
chr8 (48-101)||(7280865-7280918)
chr8 (47-108)||(31712805-31712866)
chr8 (47-175)||(41362071-41362200)
chr8 (44-84)||(1215094-1215134)
chr8 (44-108)||(5989934-5989998)
chr8 (44-84)||(10043092-10043132)
chr8 (44-108)||(12329963-12330027)
chr8 (47-107)||(15665865-15665925)
chr8 (48-108)||(16938001-16938061)
chr8 (49-117)||(17019426-17019494)
chr8 (49-117)||(17549863-17549931)
chr8 (47-180)||(24210580-24210708)
chr8 (44-84)||(32062115-32062155)
chr8 (44-108)||(32920965-32921029)
chr8 (47-94)||(3925433-3925480)
chr8 (136-187)||(8054464-8054515)
chr8 (48-87)||(9799761-9799800)
chr8 (52-99)||(34611999-34612046)
chr8 (47-109)||(14530644-14530706)
chr8 (44-94)||(19443928-19443978)
chr8 (48-102)||(22787830-22787884)
chr8 (149-187)||(31308618-31308656)
chr8 (47-117)||(40490253-40490323)
chr8 (47-84)||(3204539-3204576)
chr8 (140-181)||(10334908-10334949)
chr8 (47-108)||(12248440-12248501)
chr8 (48-101)||(16937075-16937128)
chr8 (47-100)||(32256458-32256511)
chr8 (126-174)||(1809901-1809949)
chr8 (50-102)||(1809957-1810009)
chr8 (49-133)||(4429387-4429471)
chr8 (48-84)||(11298515-11298551)
chr8 (47-99)||(16794481-16794533)
chr8 (44-76)||(31874401-31874433)
chr8 (44-76)||(36545542-36545574)
[»] scaffold0294 (1 HSPs)
scaffold0294 (47-177)||(3719-3849)
[»] scaffold0155 (1 HSPs)
scaffold0155 (48-177)||(35415-35544)
[»] scaffold0536 (1 HSPs)
scaffold0536 (22-177)||(3209-3364)
[»] scaffold0056 (1 HSPs)
scaffold0056 (47-177)||(74503-74633)
[»] scaffold0321 (1 HSPs)
scaffold0321 (49-177)||(6781-6910)
[»] scaffold0001 (1 HSPs)
scaffold0001 (56-181)||(403896-404021)
[»] scaffold0006 (1 HSPs)
scaffold0006 (48-108)||(35996-36056)
[»] scaffold0288 (1 HSPs)
scaffold0288 (44-177)||(20929-21062)
[»] scaffold0999 (1 HSPs)
scaffold0999 (44-177)||(2025-2160)
[»] scaffold0886 (1 HSPs)
scaffold0886 (48-108)||(3477-3537)
[»] scaffold0150 (1 HSPs)
scaffold0150 (49-100)||(10066-10117)
[»] scaffold1379 (1 HSPs)
scaffold1379 (47-181)||(726-863)
[»] scaffold0312 (1 HSPs)
scaffold0312 (44-81)||(6472-6509)
[»] scaffold0121 (1 HSPs)
scaffold0121 (47-108)||(12966-13027)
[»] scaffold0042 (1 HSPs)
scaffold0042 (44-76)||(94074-94106)


Alignment Details
Target: chr1 (Bit Score: 162; Significance: 1e-86; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 47 - 240
Target Start/End: Complemental strand, 11877244 - 11877051
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    |||||||||||||||||||||||| ||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  11877244 cgttttatgttattaacatggatgctgtgagtttgttcgcaagttcattctttttgtttttaacaactttgaatatgtgttgtatcgacgtattctatca 11877145  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaacaaattgtggattctcattggttggagagttgattaacactgatagtgtatccctttta 240  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  11877144 acatgaatgaattaatatcgtttatttttgtaaaacaaattgtggattctcattggttgcagagttgattaacaccgatagtgtatccctttta 11877051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 25032920 - 25032746
Alignment:
Q  17 taatatagtcatatttgtagg-----atacactgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaaca 111  Q
    |||||||||||||||||||||     |||| |||  ||| |||||| ||||||| |||||||||||||||||||||| ||||| ||||||| ||||| |     
T  25032920 taatatagtcatatttgtaggcatagatactctgatgttctatgttgttaacattgatgttgtgaatttgttcgcagattcatcctttttgtttttagcg 25032821  T
Q  112 actttgaatatgtgttgtatcggcgtattctatcaacttgaatgaattaatatcgtttatttttgtaaaacaaat 186  Q
    ||||||||| ||| ||||||||  ||| |||||||| |||||||||| |||||||||||||||| ||||| ||||    
T  25032820 actttgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttataaaaaaaat 25032746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 28677921 - 28677791
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||||| ||||| | | |||| || ||| ||||||||  ||| |||||||    
T  28677921 cgttttatgctattaacatggatgttgtgagtttgttcgcagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatca 28677822  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||| ||| ||||||||||||||||||    
T  28677821 atttgaataaatgaatatcgtttatttttgt 28677791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 181
Target Start/End: Original strand, 42491186 - 42491342
Alignment:
Q  21 atagtcatatttgtaggatacactgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaat 120  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||||||||||||| ||||||| ||| |||||  ||||   ||||| | | |||||||    
T  42491186 atagtcatatttgtagg-tactttgtcgttttatgttattaacatggatgttgtgagtttgttcacagattcatcatttt---ttttatcgaatttgaat 42491281  T
Q  121 atgtgttgtatcggcgtattctatcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
     | | ||||||||  ||| |||||||| |||||||||| ||||| ||||||||||||||||    
T  42491282 ttatattgtatcgatgtactctatcaatttgaatgaatgaatattgtttatttttgtaaaa 42491342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 181
Target Start/End: Original strand, 27535036 - 27535166
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||| ||||||||||||| ||||| | | ||||||| ||| ||||||||  ||| |||||||    
T  27535036 cgttttatgctattaacatggatgatgtgagtttgttcacagattcattctttttgtttttagcgaatttgaatttgtattgtatcgatgtactctatca 27535135  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | |||||||    ||||||||||||||||||||||    
T  27535136 atttgaatg----aatatcgtttatttttgtaaaa 27535166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 49 - 181
Target Start/End: Original strand, 10304904 - 10305036
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaac 148  Q
    ||||||| |||||| ||||||||||||| |||||| |||| |||||  |||||| ||||| ||| ||||||| | | ||||||||  ||| ||||||||     
T  10304904 ttttatgctattaaaatggatgttgtgagtttgtttgcagattcatcatttttgtttttatcaattttgaatttatattgtatcgatgtaatctatcaat 10305003  T
Q  149 ttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||||||||| |||||| |||||||||||||||    
T  10305004 ttgaatgaatgaatatcctttatttttgtaaaa 10305036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 29205607 - 29205737
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||| ||| ||| ||||| ||||||| ||||| | | |||| || | | ||||||||  ||| |||||||    
T  29205607 cgttttatgctattaacatggatgttgtgagtttattcacagattcatcctttttgtttttagcgaatttggatttttattgtatcgatgtactctatca 29205706  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  29205707 atttgaatgaatgaatatcgtttatttttgt 29205737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 44517487 - 44517617
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||| |||  |||| ||||||| |||||   | |||| || ||| ||||||||  ||| |||||||    
T  44517487 cgttttatgctattaacatggatgttgtgagtttgttcacagagtcatcctttttgtttttagtgaatttggatttgtattgtatcgatgtactctatca 44517586  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  44517587 atttgaatgaatgaatatcgtttatttttgt 44517617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 13969430 - 13969306
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||| ||||      |  |||| ||  ||||||||  |||||||||||    
T  13969430 cgttttatgttattaacatggatgttgtgagtttgttcgcagattcatcctttttgttttt------tgcgaatttgcattgtatcgatgtattctatca 13969337  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| |||||| |||||||||||    
T  13969336 atttgaatgaatgaatatcatttatttttgt 13969306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 42276694 - 42276833
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||| ||||| ||||||  ||||| ||| ||||||| ||| ||||||||  ||| |||||||    
T  42276694 cgttttatgctattaacatggatgctgtgagtttgttcacagattcatcctttttatttttagcaaatttgaatttgtattgtatcgatgtactctatca 42276793  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaacaaat 186  Q
    | ||||| ||||  |||| |||||||||||| ||| ||||    
T  42276794 atttgaaagaatgcatattgtttatttttgtcaaaaaaat 42276833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 15391034 - 15390904
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||| ||||||| ||||| |||| || ||| ||||| ||||||| ||||| | | |||| || ||| ||||||||  ||| |||||||    
T  15391034 cgttttatgctattaatatggatgctgtgagtttgatcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatca 15390935  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  15390934 agttgaatgaataaatatcgtttatttttgt 15390904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 177
Target Start/End: Complemental strand, 4882157 - 4882029
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    |||||||| |||||||||||||| ||||| ||||||| ||  ||||||||||||  ||||| | | |||| || ||| ||||||||  ||| ||||||||    
T  4882157 gttttatgctattaacatggatgctgtgagtttgttcacaaattcattctttttt-ttttagcgaatttggatttgtattgtatcgatgtactctatcaa 4882059  T
Q  148 cttgaatgaattaatatcgtttatttttgt 177  Q
     |||||||||| ||||||||||||||||||    
T  4882058 tttgaatgaatgaatatcgtttatttttgt 4882029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 15312409 - 15312325
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtat 131  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||  ||||||| |||||| || ||| ||||||    
T  15312409 cgttttatgttattaacatggatgttgtgagtttgttcgcagattcatcctttttatttttaacgactttggatttgtattgtat 15312325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 37822145 - 37822011
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||  |||||||||||||| ||||| ||| ||| ||| |||||  |||||| ||||| | | |||| || ||| ||||||||  ||| |||||||    
T  37822145 cgttttatactattaacatggatgctgtgagttttttcacagattcatcatttttgtttttagcgaatttggatttgtattgtatcgatgtactctatca 37822046  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | |||| ||||| ||||||||||||||||||||||    
T  37822045 atttgagtgaatgaatatcgtttatttttgtaaaa 37822011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 181
Target Start/End: Original strand, 32879029 - 32879166
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| ||||||||||| || ||||| | ||||||||| || || ||||||  ||||| | |||||| || ||| ||||||||  ||| |  |    
T  32879029 tgtcgttttatgctattaacatgggtgatgtgagtatgttcgcagatttatcctttttatttttagcgactttggatttgtattgtatcgatgtactaaa 32879128  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||| |||||||||| | ||||||||||||||||||||    
T  32879129 tcaatttgaatgaatgattatcgtttatttttgtaaaa 32879166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 175
Target Start/End: Complemental strand, 33486807 - 33486690
Alignment:
Q  58 attaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatgaa 157  Q
    ||||||||||||| ||||| ||||||| ||| |||||  |||||| ||||||| | |||| || ||| ||||||||  ||| |||||||| |||||||||    
T  33486807 attaacatggatgctgtgagtttgttcacagattcatcttttttgtttttaacgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaa 33486708  T
Q  158 ttaatatcgtttattttt 175  Q
    | |||||||||| |||||    
T  33486707 tgaatatcgttttttttt 33486690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 51418325 - 51418453
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaac 148  Q
    ||||||||| |||||||||||| ||||| ||||||| ||| |||||  |||||| ||||| |||  |||||| ||| || |||||  ||| ||||||||     
T  51418325 ttttatgttgttaacatggatgctgtgagtttgttcacagattcatcttttttgtttttagcaaacttgaatttgtattatatcgatgtactctatcaat 51418424  T
Q  149 ttgaatgaattaatatcgtttatttttgt 177  Q
    || ||||||| ||||||||||| ||||||    
T  51418425 ttaaatgaatgaatatcgtttacttttgt 51418453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 181
Target Start/End: Original strand, 30678629 - 30678712
Alignment:
Q  98 ttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    ||||| ||||||||||||||||| ||| ||||||||   ||||||||||| ||||  |||| ||||||||||||||||||||||    
T  30678629 ttttgtttttaacaactttgaatttgtattgtatcgatatattctatcaatttgatggaatgaatatcgtttatttttgtaaaa 30678712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 33177388 - 33177260
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    |||||||||  ||||||||||||||||||| ||||||||||| ||||| ||||||| ||||| ||| |||| |      ||||||||  ||| ||||| |    
T  33177388 cgttttatgcaattaacatggatgttgtgagtttgttcgcagattcatcctttttgtttttagcaaatttgca------ttgtatcgatgtactctatta 33177295  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | |||||||||| |||||  |||||||||||||||    
T  33177294 atttgaatgaatgaatattatttatttttgtaaaa 33177260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 15791057 - 15790928
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    |||||||||||| ||||||||||||||||| ||| ||| ||  ||||| ||||||| ||||| | | ||||||| ||| ||||||||  ||| | |||||    
T  15791057 cgttttatgttaataacatggatgttgtgatttt-ttcacatattcatactttttgtttttagcgaatttgaatttgtattgtatcgatgtactttatca 15790959  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||| ||| |||||| |||||||||||    
T  15790958 atttgaataaatgaatatcttttatttttgt 15790928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 13999251 - 13999328
Alignment:
Q  18 aatatagtcatatttgtagg-atacactgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcat 94  Q
    |||||||||||||||||||| |||  |  ||||||||||||||||||||||| ||||||| ||||||||||| |||||    
T  13999251 aatatagtcatatttgtaggcatattccatcgttttatgttattaacatggacgttgtgagtttgttcgcagattcat 13999328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 181
Target Start/End: Complemental strand, 33938816 - 33938693
Alignment:
Q  57 tattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatga 156  Q
    |||||||||||||||||||| ||||||| ||  ||||| ||||||| ||||| | | |||| || ||| ||||||||  ||| |||||||| ||||||||    
T  33938816 tattaacatggatgttgtgagtttgttcacaaattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatga 33938717  T
Q  157 attaatatcgtttatttttgtaaaa 181  Q
    || ||||| | | ||||||||||||    
T  33938716 atgaatattg-taatttttgtaaaa 33938693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 49 - 179
Target Start/End: Complemental strand, 34659429 - 34659305
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaac 148  Q
    ||||||| |||||||||||||||||||| |||| |||||  ||||| |||| || ||||| ||| |||| ||      |||||||  ||| ||||||||     
T  34659429 ttttatgctattaacatggatgttgtgagtttgctcgcaaattcatcctttatgtttttagcaaatttgcat------tgtatcgatgtactctatcaat 34659336  T
Q  149 ttgaatgaattaatatcgtttatttttgtaa 179  Q
    |||||||||| |||||| |||||||||||||    
T  34659335 ttgaatgaatgaatatcatttatttttgtaa 34659305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 40862650 - 40862543
Alignment:
Q  18 aatatagtcatatttgtagga-----tacactgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaa 112  Q
    ||||||||||||||||||||      ||| ||||||||||||| |||||||||||||||| ||| ||||||||||| |||||  | |||| ||||||||     
T  40862650 aatatagtcatatttgtaggcataagtactctgtcgttttatgctattaacatggatgttttgagtttgttcgcagattcatcatctttgtttttaacag 40862551  T
Q  113 ctttgaat 120  Q
    ||| ||||    
T  40862550 cttagaat 40862543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 32784418 - 32784548
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    |||| ||||||||||||||| ||||||||| ||||||   |  |||||  |||||| ||||| | | ||||||| ||| ||||||||  ||| |||||||    
T  32784418 cgttatatgttattaacatgaatgttgtgagtttgttaaaaaattcatcatttttgtttttagcgaatttgaatttgtattgtatcgatgtactctatca 32784517  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||| ||| ||||| ||||||||||||    
T  32784518 atttgaattaatgaatatagtttatttttgt 32784548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 178
Target Start/End: Original strand, 11121297 - 11121425
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaac-aactttgaatatgtgttgtatcggcgtattct 142  Q
    |||||||||||  ||||||||||||| |||||| ||||||| ||  ||||| ||||||| ||||| | |||||| |       ||||||||  |||||||    
T  11121297 tgtcgttttatactattaacatggatattgtgagtttgttcacaaattcatcctttttgtttttagcgaactttca-------ttgtatcgatgtattct 11121389  T
Q  143 atcaacttgaatgaattaatatcgtttatttttgta 178  Q
    ||||| |||||||||| |||||| ||||||||||||    
T  11121390 atcaatttgaatgaatgaatatcatttatttttgta 11121425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 177
Target Start/End: Original strand, 12871942 - 12872075
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| || ||||||||||| ||||| |||||||  |  | ||| ||||||| ||||| | | | || || ||| |||||||   ||| ||||    
T  12871942 tgtcgttttatgctaataacatggatgctgtgagtttgttcataaatccatcctttttgtttttagcgaatatggatttgtattgtatcaatgtactcta 12872041  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgt 177  Q
    |||| |||||||||| ||||||||||||||||||    
T  12872042 tcaatttgaatgaatgaatatcgtttatttttgt 12872075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 14265624 - 14265752
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    |||||||| |||||||||||||||||||| ||||||| || | |||| ||||||| ||||| | | ||||||| ||| |||||||   ||| ||||||||    
T  14265624 gttttatgctattaacatggatgttgtgagtttgttcaca-gatcatcctttttgtttttagcgaatttgaatttgtattgtatcaatgtactctatcaa 14265722  T
Q  148 cttgaatgaattaatatcgtttatttttgt 177  Q
     ||||| |||| || ||| |||| ||||||    
T  14265723 tttgaaagaatgaacatcttttacttttgt 14265752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 181
Target Start/End: Complemental strand, 50107713 - 50107577
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||  | ||||||||||||||| || |||||||| || ||||| | ||||| ||||| | || |||||| ||| | ||||||  ||  || |    
T  50107713 tgtcgttttatccttttaacatggatgttgagagtttgttcgtagattcat-cattttgtttttagcgacattgaatttgtctagtatcgatgttctcaa 50107615  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||| |||||| ||| ||||||||||||||||||||||    
T  50107614 tcaatttgaattaataaatatcgtttatttttgtaaaa 50107577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 175
Target Start/End: Original strand, 3233110 - 3233238
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| ||||||||||  |||||||| ||||||| ||  || || | ||||| ||||| | | |||| || | | ||||||||  ||| |||||||    
T  3233110 cgttttatgctattaacatgagtgttgtgagtttgttcacatattaatccgttttgtttttagcgaatttggatttatattgtatcgatgtaatctatca 3233209  T
Q  147 acttgaatgaattaatatcgtttattttt 175  Q
    | |||||||||| ||||||||||||||||    
T  3233210 atttgaatgaatgaatatcgtttattttt 3233238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 13691553 - 13691432
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| |||||||  || ||||| ||||||| ||||| ||      ||| ||| ||| ||||  ||| |||||||    
T  13691553 cgttttatgctattaacatggatgttgtgagtttgttcatagattcatcctttttgtttttagca------aatttgtattgcatcgatgtactctatca 13691460  T
Q  147 acttgaatgaattaatatcgtttatttt 174  Q
    | |||||||||||||| |||||| ||||    
T  13691459 atttgaatgaattaatgtcgtttgtttt 13691432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 170
Target Start/End: Original strand, 29938550 - 29938662
Alignment:
Q  58 attaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatgaa 157  Q
    |||| |||||||||||||| | ||||||||| ||||| |||| |  ||||| | ||||||||| ||| ||||||||  ||| ||||| ||||| ||||||    
T  29938550 attatcatggatgttgtgagtgtgttcgcagattcatcctttctatttttagcgactttgaatttgtattgtatcgatgtactctataaacttaaatgaa 29938649  T
Q  158 ttaatatcgttta 170  Q
    | ||||| |||||    
T  29938650 tgaatattgttta 29938662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 108
Target Start/End: Complemental strand, 44513791 - 44513731
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||||||||||||||||||||||||| |||||||  || ||||| ||||||| |||||    
T  44513791 gttttatgttattaacatggatgttgtgagtttgttcaaagattcatcctttttgttttta 44513731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 7995357 - 7995298
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||| |||||    
T  7995357 ttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgttttta 7995298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 13488318 - 13488184
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||||| ||| ||| ||  || ||  |||||| ||||| | | |||| || ||| ||||||||  ||| |||||||    
T  13488318 cgttttatgctattaacatggatgatgtgagtttattcacaaatttatcttttttgtttttagcgaatttggatttgtattgtatcgatgtactctatca 13488219  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | |||||||||| ||||||  |||||||| |||||    
T  13488218 atttgaatgaatgaatatcaattatttttataaaa 13488184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 34567005 - 34567059
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttttt 101  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||    
T  34567005 cgttttatgctattaacatggatgttgtgagtttgttcacagattcatccttttt 34567059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 177
Target Start/End: Original strand, 46589469 - 46589596
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    ||||||||||||||||||||||||||| ||||| ||||||| ||  ||||| | ||||| ||||| |      |||| |   ||||||||  ||| ||||    
T  46589469 tgtcgttttatgttattaacatggatgatgtgagtttgttcacatattcatcccttttgtttttagc------gaattttcattgtatcgatgtactcta 46589562  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgt 177  Q
    |||| |||||||||| |||||| |||||||||||    
T  46589563 tcaatttgaatgaatgaatatcatttatttttgt 46589596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 86
Target Start/End: Original strand, 47392457 - 47392499
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgc 86  Q
    |||||||||| |||||||||||||||||||||| |||||||||    
T  47392457 tgtcgttttacgttattaacatggatgttgtgagtttgttcgc 47392499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 175
Target Start/End: Original strand, 8893612 - 8893738
Alignment:
Q  43 ctgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattct 142  Q
    |||| |||||||| |||||||||||||||| ||| |||||||  || ||||| ||||||| ||||| |      |||| ||  ||||||||  ||| |||    
T  8893612 ctgttgttttatgctattaacatggatgttatgagtttgttcctagattcatcctttttgtttttagc------gaatttgcattgtatcgatgtactct 8893705  T
Q  143 atcaacttgaatgaattaatatcgtttattttt 175  Q
    ||||| |||||||||| |||||| |||||||||    
T  8893706 atcaatttgaatgaatgaatatcatttattttt 8893738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 15276236 - 15276175
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||||| |||||||||||||||||||| | ||||| ||| ||||| ||||||| |||||    
T  15276236 cgttttatgctattaacatggatgttgtgagtctgttcacagattcatcctttttgttttta 15276175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 26199905 - 26199965
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||||||| |||||||||||||||||||| ||| ||| || ||| |||||||||| |||||    
T  26199905 gttttatgctattaacatggatgttgtgagtttattcacatgttaattctttttgttttta 26199965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 175
Target Start/End: Original strand, 26771427 - 26771552
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| ||||||||||| |||||||| ||||||||    |||||  |||||| |||||       ||||| ||| ||||||||  ||| ||||    
T  26771427 tgtcgttttatgctattaacatggttgttgtgagtttgttcgttaattcatcttttttgttttta------gtgaatttgtattgtatcgatgtactcta 26771520  T
Q  144 tcaacttgaatgaattaatatcgtttattttt 175  Q
    |||| |||||||||| |||||| |||||||||    
T  26771521 tcaatttgaatgaatgaatatcatttattttt 26771552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 29067368 - 29067412
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcag 88  Q
    |||||||||||| |||||||||||||| |||||| ||||||||||    
T  29067368 tgtcgttttatgctattaacatggatgctgtgaaattgttcgcag 29067412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 177
Target Start/End: Original strand, 1141025 - 1141147
Alignment:
Q  54 tgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaa 153  Q
    ||||||||||| ||||||||||| ||| || |||  || ||| |||||| ||||| ||||||||||| | | || ||| |  |||||||||| | || ||    
T  1141025 tgttattaacacggatgttgtgagtttatttgcatatttattatttttg-ttttagcaactttgaatttatattatattgatgtattctatcgatttaaa 1141123  T
Q  154 tgaattaatatcgtttatttttgt 177  Q
     |||| ||||||||||||||||||    
T  1141124 agaatgaatatcgtttatttttgt 1141147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 175
Target Start/End: Complemental strand, 9298216 - 9298085
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||| ||||||  |||||||||||||||||||| ||| ||||||| ||||| ||||||| ||| |   | ||| ||| | | | ||||||  ||| ||||    
T  9298216 tgtcattttatactattaacatggatgttgtgagtttattcgcagattcatcctttttgttttcagtgattttaaatttatatagtatcgatgtactcta 9298117  T
Q  144 tcaacttgaatgaattaatatcgtttattttt 175  Q
    ||||||| ||||||| || ||| |||||||||    
T  9298116 tcaacttaaatgaataaacatcatttattttt 9298085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 16141001 - 16141080
Alignment:
Q  98 ttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatgaattaatatcgtttatttttgt 177  Q
    ||||| ||||||| | |||| || ||| ||||||||  ||| |||||||| ||| |||||| ||||||||||||||||||    
T  16141001 ttttgtttttaacgaatttggatttgtattgtatcgatgtactctatcaatttggatgaatgaatatcgtttatttttgt 16141080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 112
Target Start/End: Complemental strand, 25278624 - 25278561
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaa 112  Q
    ||||||| ||| || ||| ||||||||| ||||||||||| ||||| ||||||| |||||||||    
T  25278624 ttttatgctatcaatatgtatgttgtgagtttgttcgcagattcatcctttttgtttttaacaa 25278561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 33125605 - 33125562
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgca 87  Q
    |||||||||||| |||||||||||| ||||||| ||||||||||    
T  33125605 tgtcgttttatgctattaacatggacgttgtgagtttgttcgca 33125562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 20413119 - 20413185
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaac 110  Q
    |||||||||||| |||||||||||||| ||||| |||||||  || |||||  |||||| |||||||    
T  20413119 tgtcgttttatgctattaacatggatgatgtgagtttgttcatagattcatcatttttgtttttaac 20413185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 173
Target Start/End: Complemental strand, 26097814 - 26097689
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||||| |||||||||| | ||||  |||||  |||||    |||| ||| ||| ||||||||   || ||||||     
T  26097814 cgttttatgctattaacatggatgatgtgagtttgttcgca-gatcatcttttttatttttagtttctttaaatttgtattgtatcgatctactctatcg 26097716  T
Q  147 acttgaatgaattaatatcgtttattt 173  Q
    | ||||||||||||||||| |||||||    
T  26097715 atttgaatgaattaatatcttttattt 26097689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 424077 - 424040
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttg 81  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  424077 tgtcgttttatgctattaacatggatgttgtgagtttg 424040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 84
Target Start/End: Original strand, 2350946 - 2350983
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttc 84  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  2350946 cgttttatgctattaacatggatgttgtgagtttgttc 2350983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 177
Target Start/End: Original strand, 13152859 - 13152896
Alignment:
Q  140 tctatcaacttgaatgaattaatatcgtttatttttgt 177  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  13152859 tctatcaatttgaatgaatgaatatcgtttatttttgt 13152896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 28213377 - 28213438
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||||| |||||||||||||| ||||||| ||||| ||  ||||| ||||||| |||||    
T  28213377 cgttttatgctattaacatggatgatgtgaatctgttcacatattcatcctttttgttttta 28213438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 84
Target Start/End: Complemental strand, 29726379 - 29726342
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttc 84  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  29726379 cgttttatgctattaacatggatgttgtgagtttgttc 29726342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 33703300 - 33703239
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||||| |||||||||||||  ||||| ||||||| ||| ||||| ||||||| |||||    
T  33703300 cgttttatgctattaacatggatactgtgagtttgttcacagattcatcctttttgttttta 33703239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 44562539 - 44562478
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||||| ||||||||||||||||||||   ||||| ||| ||||| ||||||| |||||    
T  44562539 cgttttatgctattaacatggatgttgtgagcctgttcacagattcatcctttttgttttta 44562478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 174
Target Start/End: Original strand, 45750819 - 45750944
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaac 148  Q
    ||||||| |||||||||||||| ||||| |||||||  |  ||||| ||||||| ||||| ||| |||| || | | |||||| |  ||| ||||||||     
T  45750819 ttttatgctattaacatggatgctgtgagtttgttcataaattcatcctttttgtttttagcaaatttggatttttattgtattgatgtactctatcaat 45750918  T
Q  149 ttgaatgaattaatatcgtttatttt 174  Q
    ||||| |||  |||||| ||||||||    
T  45750919 ttgaacgaacgaatatcttttatttt 45750944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 5701446 - 5701498
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttt 99  Q
    |||| |||| ||||||| |||||||||||| ||||||||||| ||||| ||||    
T  5701446 cgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccttt 5701498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 93
Target Start/End: Complemental strand, 13144724 - 13144680
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttca 93  Q
    ||||||| ||||||| |||||||||||| ||||||||||| ||||    
T  13144724 ttttatgctattaacttggatgttgtgagtttgttcgcagattca 13144680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 173
Target Start/End: Original strand, 28666475 - 28666523
Alignment:
Q  125 gttgtatcggcgtattctatcaacttgaatgaattaatatcgtttattt 173  Q
    |||||||||  ||| |||||||| |||||||||| ||||||||||||||    
T  28666475 gttgtatcgatgtactctatcaatttgaatgaataaatatcgtttattt 28666523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 186
Target Start/End: Complemental strand, 30853664 - 30853604
Alignment:
Q  126 ttgtatcggcgtattctatcaacttgaatgaattaatatcgtttatttttgtaaaacaaat 186  Q
    ||||||||  ||||| |||||| |||||| ||| |||||| ||||||||||||||| ||||    
T  30853664 ttgtatcgatgtattatatcaatttgaataaatgaatatcatttatttttgtaaaagaaat 30853604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 36621677 - 36621729
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttttt 101  Q
    ||||||| ||||||||||||||||||||  |||||| ||  ||||||||||||    
T  36621677 ttttatgctattaacatggatgttgtgagcttgttcacatattcattcttttt 36621729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 83
Target Start/End: Original strand, 52839854 - 52839890
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgtt 83  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  52839854 cgttttatgctattaacatggatgttgtgagtttgtt 52839890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 69)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 38 - 181
Target Start/End: Original strand, 32309826 - 32309969
Alignment:
Q  38 atacactgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgt 137  Q
    |||| ||||||||||||  |||||||||||||||||||| ||||||||||| |||||  |||||  ||||||| ||||||||| | | || |||||  ||    
T  32309826 atactctgtcgttttatcctattaacatggatgttgtgagtttgttcgcagattcatcttttttatttttaacgactttgaatttatattatatcgatgt 32309925  T
Q  138 attctatcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | |||||||| |||||||||| ||||||||||||||||||||||    
T  32309926 actctatcaatttgaatgaatcaatatcgtttatttttgtaaaa 32309969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 17 - 181
Target Start/End: Complemental strand, 42505228 - 42505061
Alignment:
Q  17 taatatagtcatatttgtagg-----atacactgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaaca 111  Q
    |||||||||||||||||||||     |||| ||||||||| ||| |||||||||||||||||||| ||||||||||| ||||| ||||||| |||||       
T  42505228 taatatagtcatatttgtaggcatagatactctgtcgtttcatgctattaacatggatgttgtgagtttgttcgcagattcatcctttttgtttttagag 42505129  T
Q  112 actttgaatatgtgttgtatcggcgtattctatcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    ||  ||||| ||| |||||| |  ||| |||||||| |||||||||| ||||||||||||||||||||||    
T  42505128 ac--tgaatttgtattgtattgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtaaaa 42505061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 17096023 - 17095893
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||| ||||| ||||||| ||||| | | ||||||| ||| ||||||||  ||| |||||||    
T  17096023 cgttttatgctattaacatggatgatgtgagtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtattgtatcgatgtactctatca 17095924  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||| ||||||||||||||    
T  17095923 atttgaatgaatgaatgtcgtttatttttgt 17095893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 26293949 - 26294079
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||| ||||||||||||| ||||||| ||  ||||| ||||||| ||||| | | ||||||| ||| |||||||| |||| ||||||     
T  26293949 cgttttatgctattaatatggatgttgtgagtttgttcacatattcatcctttttgtttttagcgaatttgaatttgtattgtatcgacgtactctatct 26294048  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  26294049 atttgaatgaatgaatatcgtttatttttgt 26294079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 177
Target Start/End: Complemental strand, 39179630 - 39179497
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| |||||||||||||||||||| |||||||  |  ||||||||||||| ||||| | | |||| || ||| ||||||||  ||| | ||    
T  39179630 tgtcgttttatgctattaacatggatgttgtgagtttgttcataaattcattctttttgtttttagcgaatttggatttgtattgtatcgatgtacttta 39179531  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgt 177  Q
    |||| |||||||||| ||||||||||||||||||    
T  39179530 tcaatttgaatgaatgaatatcgtttatttttgt 39179497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 49 - 181
Target Start/End: Original strand, 20483527 - 20483659
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaac 148  Q
    ||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||| ||||| | | |||| || ||| || |||||  ||| ||||| ||     
T  20483527 ttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattatatcgatgtactctattaat 20483626  T
Q  149 ttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||||||||| ||||||||||||||||||||||    
T  20483627 ttgaatgaatgaatatcgtttatttttgtaaaa 20483659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 11734627 - 11734497
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| ||||||||||| |||||||| ||||||| ||  ||||| ||||||| ||||| | | ||||||| ||| ||||||||  ||| | |||||    
T  11734627 cgttttatgctattaacatggttgttgtgagtttgttcacatattcatcctttttgtttttagcgaatttgaatttgtattgtatcgatgtactttatca 11734528  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  11734527 atttgaatgaatgaatatcgtttatttttgt 11734497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 17699892 - 17700022
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||| ||||| | | |||| || ||| ||||||||  ||| |||||||    
T  17699892 cgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgttttgtatcgatgtactctatca 17699991  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||| | ||| ||||||||||||||||||    
T  17699992 atttgattcaatgaatatcgtttatttttgt 17700022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 186
Target Start/End: Original strand, 42781337 - 42781479
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| |||||||||||||||||||| ||||||  ||  ||||| ||||||  ||||| | ||||||||| ||| ||||||||  | | ||||    
T  42781337 tgtcgttttatgctattaacatggatgttgtgagtttgttaacaaattcatcctttttatttttagcgactttgaatttgtattgtatcgatgcactcta 42781436  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgtaaaacaaat 186  Q
    |||| |||||| ||| |||||||||||||||||| ||| ||||    
T  42781437 tcaatttgaataaataaatatcgtttatttttgtcaaaaaaat 42781479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 44 - 177
Target Start/End: Original strand, 6635584 - 6635717
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| ||||| |||||||  ||||| ||||||| ||| ||||| ||||||| ||||||| | ||||||| | | ||||||||  ||| ||||    
T  6635584 tgtcgttttatgctattatcatggatactgtgagtttgttcacagattcatcctttttgtttttaacgaatttgaatttatattgtatcgatgtactcta 6635683  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgt 177  Q
    |||| |||||||||| || |||||||||||||||    
T  6635684 tcaatttgaatgaatgaaaatcgtttatttttgt 6635717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 48 - 175
Target Start/End: Original strand, 6281384 - 6281511
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    |||||||| |||||||||||||| ||||| ||||||| ||| ||||| ||||||| ||||| | | ||||||| ||| ||||||||   || ||||||||    
T  6281384 gttttatgctattaacatggatgatgtgagtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtattgtatcgatatactctatcaa 6281483  T
Q  148 cttgaatgaattaatatcgtttattttt 175  Q
     |||||||||| ||||||||||| ||||    
T  6281484 tttgaatgaatgaatatcgtttactttt 6281511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 6681659 - 6681529
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| ||||||||| |||| ||| | ||||||| ||| ||||| ||||||| ||||| ||| |||| || ||| ||||||||  ||| |||||||    
T  6681659 cgttttatgctattaacattgatgatgtaagtttgttcacagattcatcctttttgtttttagcaaatttggatttgtattgtatcgatgtactctatca 6681560  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | | |||||||| ||||||||||||||||||    
T  6681559 attagaatgaatgaatatcgtttatttttgt 6681529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 7771603 - 7771469
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| |||||  |||||| ||| ||||| ||||||| ||||| | | |||  || ||| ||||||||  ||| | |||||    
T  7771603 cgttttatgctattaacatggatgatgtgagcttgttcacagattcatcctttttgtttttagcgaatttagatttgtattgtatcgatgtactatatca 7771504  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | |||||||||| ||||||||||||||||||||||    
T  7771503 atttgaatgaataaatatcgtttatttttgtaaaa 7771469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 17331667 - 17331797
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| ||||||||||||   ||||| ||||||| ||| ||||| ||||||| ||||| | | |||| || ||| ||||||||  ||| |||||||    
T  17331667 cgttttatgctattaacatggaatatgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatca 17331766  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  17331767 atttgaatgaatgaatatcgtttatttttgt 17331797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 26294856 - 26294722
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||| |||||  |||||| ||||| | | |||  || ||| ||||||||   || |||||||    
T  26294856 cgttttatgctattaacatggatgatgtgagtttgttcacagattcatcatttttgtttttagcgaatttagatttgtattgtatcgatatactctatca 26294757  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | |||||||||| |||| |||||||||||||||||    
T  26294756 atttgaatgaatgaataccgtttatttttgtaaaa 26294722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 33164251 - 33164121
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||||| ||||||  | | ||||| | ||||| ||||| ||| ||||||| ||| || |||||  ||| ||| |||    
T  33164251 cgttttatgctattaacatggatgatgtgagtttgtttacggattcatcccttttgtttttagcaaatttgaatttgtattatatcgatgtactctgtca 33164152  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  33164151 atttgaatgaatgaatatcgtttatttttgt 33164121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 42396292 - 42396158
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    |||||||||||||||||||| ||||||||| ||||||| ||  || || | ||||| |||||   | |||| || ||| ||||||||   ||||||||||    
T  42396292 cgttttatgttattaacatgaatgttgtgagtttgttcacatattaatcccttttgtttttagtgaatttggatttgtattgtatcgatatattctatca 42396193  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | |||||||||| |||||||||||||||| |||||    
T  42396192 atttgaatgaatgaatatcgtttatttttataaaa 42396158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 181
Target Start/End: Original strand, 7151132 - 7151269
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||||||||||||||| ||   ||| ||||||||  | |||||  |||||| ||||||| ||||||||| ||| |||||||    || ||||    
T  7151132 tgtcgttttatgttattaacatggttgcactgagtttgttcgtggattcatcttttttgtttttaacgactttgaatttgtattgtatcaatttactcta 7151231  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    || | || ||||||| ||||||||||||||||||||||    
T  7151232 tcgattttaatgaatgaatatcgtttatttttgtaaaa 7151269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 15710869 - 15710991
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    |||||||| |||||||||||||||||||| ||||||||||  ||||| |||||||||||||       ||||| ||  |||||| |  ||||||||||||    
T  15710869 gttttatgctattaacatggatgttgtgagtttgttcgcatattcatcctttttggtttta------gtgaatttgcattgtattgatgtattctatcaa 15710962  T
Q  148 cttgaatgaattaatatcgtttatttttg 176  Q
     |||||||||| |||||| ||||||||||    
T  15710963 tttgaatgaatgaatatcatttatttttg 15710991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 177
Target Start/End: Complemental strand, 23881901 - 23881768
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    ||||| |||||| |||||||||||||||||||| ||||| | ||  ||||| ||||||  ||||  | | |||| || ||| ||||||||  ||| ||||    
T  23881901 tgtcggtttatgctattaacatggatgttgtgagtttgtccacaaattcatcctttttcttttttgcgaatttggatttgtattgtatcgatgtactcta 23881802  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgt 177  Q
    |||| |||||||||| ||||||||||||||||||    
T  23881801 tcaatttgaatgaatgaatatcgtttatttttgt 23881768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 175
Target Start/End: Complemental strand, 177886 - 177758
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||| | |||||||||||||||||||| ||||||| ||| ||||| ||||||| ||||| | | |||| || ||| ||||||||  ||| || ||||    
T  177886 cgttttaggctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactccatca 177787  T
Q  147 acttgaatgaattaatatcgtttattttt 175  Q
    | |||||||||| |||||| ||| |||||    
T  177786 atttgaatgaatgaatatcattttttttt 177758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 158
Target Start/End: Complemental strand, 2555132 - 2555021
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||| | |||||||||||||||||||| ||||||| ||  ||||| ||||||| |||||| || |||| || ||| ||||||||  ||| |||||||    
T  2555132 cgttttacgctattaacatggatgttgtgagtttgttcacatattcatcctttttgtttttaagaaatttggatttgtattgtatcgatgtactctatca 2555033  T
Q  147 acttgaatgaat 158  Q
    | ||||||||||    
T  2555032 atttgaatgaat 2555021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 20271035 - 20271098
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttt 107  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||| |||||||||||| |||||    
T  20271035 tgtcgttttatgctattaacatggatgttgtgagtttgttcacagattcattcttttttgtttt 20271098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 17732168 - 17732039
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| |||| ||| |||| |||||   | |||| || ||| ||||||||  ||| |||||||    
T  17732168 cgttttatgctattaacatggatgttgtgagtttgttcacagattca-tctctttgtttttagtgaatttggatttgtattgtatcgatgtactctatca 17732070  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||| | |||||| |||||||||||    
T  17732069 atttgaatgagtgaatatcatttatttttgt 17732039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 181
Target Start/End: Original strand, 18654121 - 18654255
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||  || || ||||||| ||||| | | |||| || | | |||||||   ||| |||||||    
T  18654121 cgttttatgctattaacatggatgctgtgagtttgttcacaaatttatcctttttgtttttagcgaatttggatttatattgtatcaatgtagtctatca 18654220  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | |||||||||| ||||||| ||||||||||||||    
T  18654221 atttgaatgaatgaatatcgcttatttttgtaaaa 18654255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 32347505 - 32347371
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||  ||| ||||||| ||| ||||| | ||||| ||||| | | |||||||  || ||||||||  |||  || |||    
T  32347505 cgttttatgctattaacatggatgtattgagtttgttcacagattcatccattttgtttttagcgaatttgaattcgtattgtatcgatgtacactgtca 32347406  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | |||||||||| ||||||||||| ||||||||||    
T  32347405 atttgaatgaatgaatatcgtttacttttgtaaaa 32347371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 181
Target Start/End: Original strand, 34431427 - 34431537
Alignment:
Q  71 ttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatgaattaatatcgttta 170  Q
    |||||| ||||||| ||  ||||| ||||||| ||||| | | |||| || ||| ||||||||  ||| |||||||| |||||||||| |||||||||||    
T  34431427 ttgtgagtttgttcacaaattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgttta 34431526  T
Q  171 tttttgtaaaa 181  Q
    |||||||||||    
T  34431527 tttttgtaaaa 34431537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 174
Target Start/End: Original strand, 3740673 - 3740798
Alignment:
Q  50 tttatgttattaacatggatgttgtgaatttgttcgcaggttcattc-tttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaac 148  Q
    |||||| || ||||||||||||||||| |||||||  || ||||||| |||||| ||||| | | ||||||| ||  |||||||   ||| ||||||||     
T  3740673 tttatgctagtaacatggatgttgtgagtttgttcatagattcattcctttttgtttttagcgaatttgaatttggattgtatcaatgtactctatcaat 3740772  T
Q  149 ttgaatgaattaatatcgtttatttt 174  Q
    |||||||||| |||||||||||||||    
T  3740773 ttgaatgaatgaatatcgtttatttt 3740798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 28501010 - 28501067
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttttt 101  Q
    ||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||    
T  28501010 tgtcgttttttgctattaacatggatgttgtgagtttgttcgcaggttcatccttttt 28501067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 174
Target Start/End: Original strand, 27241394 - 27241521
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| ||||||| |||||||||||| ||||||||||| ||||| ||||||| ||||| | | |||  || | | ||||||||  ||| ||||| |    
T  27241394 cgttttatgctattaacgtggatgttgtgagtttgttcgcagattcatcctttttgtttttagcgaatttagatttctattgtatcgatgtactctatga 27241493  T
Q  147 acttgaatgaattaatatcgtttatttt 174  Q
    | |||||| ||| ||||| |||||||||    
T  27241494 atttgaattaatgaatatagtttatttt 27241521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 13161684 - 13161814
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||| ||||||| | |||||| |||| ||||| ||||||| ||| ||  ||||||||| ||| |||||| |  ||| |||||||    
T  13161684 cgttttatgctattaacatgaatgttgtaagtttgttagcagattcatgctttttgttttaaatgactttgaatttgtattgtattgatgtactctatca 13161783  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | || | ||||| || ||| |||||||||||    
T  13161784 attttagtgaatgaaaatcatttatttttgt 13161814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 13677513 - 13677558
Alignment:
Q  136 gtattctatcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||    
T  13677513 gtattctatcaacttgaatgaatgaatatcgtttatttttataaaa 13677558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 39591369 - 39591418
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttca 93  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||| ||||    
T  39591369 tgtcgttttatgttattaacatggatgttatgagtttgttcgcagattca 39591418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 8957527 - 8957591
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||||||||||||||||||| ||||||||||||||| | ||  ||||| ||||||| |||||    
T  8957527 tgtcgttttatgttattaacatgaatgttgtgaatttgtccacaaattcatcctttttgttttta 8957591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 11976849 - 11976797
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttt 99  Q
    ||||||||||||||||| |||||||||||| ||||||||||| ||||| ||||    
T  11976849 cgttttatgttattaacttggatgttgtgagtttgttcgcagattcatccttt 11976797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 19645829 - 19645765
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||||||||||| |||||||||||||||||||| | ||||| ||| ||||| ||||||| |||||    
T  19645829 tgtcgttttatgctattaacatggatgttgtgagtctgttcacagattcatcctttttgttttta 19645765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 32387785 - 32387828
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgca 87  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  32387785 tgtcgttttatgttattaatatggatgttgtgagtttgttcgca 32387828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 181
Target Start/End: Original strand, 37219327 - 37219454
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||| ||||| | | |||  ||      ||||||   ||| |||||||    
T  37219327 cgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttg-ttttagcgaattttcat------tgtatcaatgtactctatca 37219419  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | |||||||||| ||| ||||||||||||||||||    
T  37219420 atttgaatgaatgaatttcgtttatttttgtaaaa 37219454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 39531111 - 39531056
Alignment:
Q  126 ttgtatcggcgtattctatcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    ||||||||  ||| |||||||| |||||||||| ||||||||||||||||||||||    
T  39531111 ttgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtaaaa 39531056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 6012840 - 6012759
Alignment:
Q  50 tttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtat 131  Q
    |||||||||||||||| |||||||||| |||||| |||  ||||||| ||||  ||||| | ||||||||| ||| ||||||    
T  6012840 tttatgttattaacattgatgttgtgagtttgtttgcaaattcattcattttatttttagcgactttgaatttgtattgtat 6012759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 9196720 - 9196679
Alignment:
Q  140 tctatcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||||||| |||||||||| ||||||||||||||||||||||    
T  9196720 tctatcaatttgaatgaatgaatatcgtttatttttgtaaaa 9196679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 16981476 - 16981529
Alignment:
Q  46 tcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttt 99  Q
    ||||| |||| ||||||| |||||||||||| ||||||||||| ||||||||||    
T  16981476 tcgttatatgctattaacttggatgttgtgagtttgttcgcagattcattcttt 16981529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 32390457 - 32390400
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttttt 101  Q
    |||||||||||| |||||||||||||  ||||| ||||||||||| ||||| ||||||    
T  32390457 tgtcgttttatgctattaacatggatactgtgagtttgttcgcagattcatccttttt 32390400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 41554811 - 41554872
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| || || ||||||| |||||    
T  41554811 cgttttatgctattaacatggatgttgtgagtttgttcacagatttatcctttttgttttta 41554872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 3079116 - 3079056
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttt 107  Q
    |||||||||||||||||||||||| ||||| ||||||| |||  |||| |||||| |||||    
T  3079116 cgttttatgttattaacatggatgctgtgagtttgttcacagactcatccttttttgtttt 3079056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 25962209 - 25962297
Alignment:
Q  18 aatatagtcatatttgtagg-----atacactgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttttt 101  Q
    ||||||||||||||||||||     ||||  |||||||||||| |||||||||| ||||||||| ||| ||||||| || || ||||||    
T  25962209 aatatagtcatatttgtaggcatagatactttgtcgttttatgctattaacatgaatgttgtgagtttcttcgcagatttatccttttt 25962297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 29098071 - 29098238
Alignment:
Q  1 attccggagacttgaataatatagtcatatttgtagga-----tacactgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcatt 95  Q
    ||||||||||||||||||   ||||||||||||||||      |||  || ||||||||| |||||||||| ||| ||||| ||||||| ||  |||||     
T  29098071 attccggagacttgaata---tagtcatatttgtaggcatatgtaccttgccgttttatgctattaacatgtatgatgtgagtttgttcacaaattcatc 29098167  T
Q  96 ctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatgaattaatatcg 166  Q
    | ||||| ||||| | | |||| || ||| ||||| ||  |||||||||||| |||||||| | |||||||    
T  29098168 ccttttgtttttagcgaatttggatttgtattgtaccgatgtattctatcaatttgaatgagtgaatatcg 29098238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 181
Target Start/End: Complemental strand, 31255052 - 31254923
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttt-aacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    |||||||||||||| ||  ||||||||| |||||| |||| |||||  |||||  |||| ||| | ||||||| ||| |||||||| |||| ||||| ||    
T  31255052 ttttatgttattaaaataaatgttgtgagtttgtttgcagattcatcgttttttattttaaacgattttgaatttgtattgtatcgtcgtactctattaa 31254953  T
Q  148 cttgaatgaattaatatcgtttatttttgtaaaa 181  Q
     |||||||    ||||||||| ||||||||||||    
T  31254952 tttgaatg----aatatcgttcatttttgtaaaa 31254923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 170
Target Start/End: Original strand, 28040968 - 28041091
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| || ||||||||||| ||||| |||  || ||  ||||| ||||||| ||||| ||| |||| || ||| ||||||||   || |||||||    
T  28040968 cgttttatgctactaacatggatgatgtgagtttactcacatattcatcctttttgtttttagcaaatttggatttgtattgtatcgatatactctatca 28041067  T
Q  147 acttgaatgaattaatatcgttta 170  Q
    | |||||||||| |||||| ||||    
T  28041068 atttgaatgaatgaatatctttta 28041091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 5378627 - 5378750
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    |||||||| ||||||||||||||||||||   ||||| ||| ||||| ||||||| ||||| |      |||| ||  || |||||  ||| ||||||||    
T  5378627 gttttatgctattaacatggatgttgtgagcctgttcacagattcatcctttttgattttagc------gaatttgcattatatcgatgtactctatcaa 5378720  T
Q  148 cttgaatgaattaatatcgtttatttttgt 177  Q
     |||||||||| |||||| |||||||||||    
T  5378721 tttgaatgaatgaatatcatttatttttgt 5378750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 189
Target Start/End: Original strand, 11647532 - 11647665
Alignment:
Q  56 ttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaa-t 154  Q
    |||||||| |||||||||||| ||||| ||||  |||||  |||||| ||||| | ||||||||| ||| |||||| |  ||| ||||| || ||||| |    
T  11647532 ttattaacgtggatgttgtgagtttgtacgcatattcatcatttttgtttttagcgactttgaatttgtattgtattgatgtactctattaa-ttgaagt 11647630  T
Q  155 gaattaatatcgtttatttttgtaaaacaaattgt 189  Q
    |||| ||||  |||||||||||| ||| |||||||    
T  11647631 gaatgaataatgtttatttttgttaaagaaattgt 11647665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 94
Target Start/End: Original strand, 15571089 - 15571139
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcat 94  Q
    ||||||| |||| ||||||| |||||||||||| ||||||||||| |||||    
T  15571089 tgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcat 15571139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 133
Target Start/End: Original strand, 42609483 - 42609569
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcg 133  Q
    |||||||||| ||||||||||||||||||| ||||||| ||  |||||  |||||  ||||| | | ||||||| ||| ||||||||    
T  42609483 cgttttatgtcattaacatggatgttgtgagtttgttcacaaattcatcttttttctttttagcgaatttgaatttgtattgtatcg 42609569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 2415723 - 2415780
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttttt 101  Q
    |||||||||||| |||||||||||||||||||| | ||||| ||  ||||| ||||||    
T  2415723 tgtcgttttatgctattaacatggatgttgtgagtctgttcacaaattcatccttttt 2415780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 6074526 - 6074465
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||||| || |||||||||||||||||||| |||||||  || ||||| ||||||| |||||    
T  6074526 cgttttgtgctattaacatggatgttgtgagtttgttcatagattcatcctttttgttttta 6074465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 6647703 - 6647642
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||| | |||||||||||||||||||| ||| ||||||| |||||  |||||| |||||    
T  6647703 cgttttaagctattaacatggatgttgtgagtttattcgcagattcatcatttttgttttta 6647642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 33486359 - 33486298
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||||| ||||||| |||||||||||| ||||||| ||| |||||  |||||| |||||    
T  33486359 cgttttatgctattaacgtggatgttgtgagtttgttcacagattcatcatttttgttttta 33486298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 173
Target Start/End: Complemental strand, 39415984 - 39415923
Alignment:
Q  112 actttgaatatgtgttgtatcggcgtattctatcaacttgaatgaattaatatcgtttattt 173  Q
    ||||||||||||| ||||||||  ||| |  ||||| |||||||||| ||||||||||||||    
T  39415984 actttgaatatgtattgtatcgatgtacttaatcaatttgaatgaataaatatcgtttattt 39415923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 40564950 - 40564877
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttg 117  Q
    |||||||||||| ||||||||| |||||||||| ||||||| ||  |||||  |||||| ||||| ||| ||||    
T  40564950 tgtcgttttatgctattaacatagatgttgtgagtttgttcacaaattcatcttttttgtttttagcaaatttg 40564877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 84
Target Start/End: Original strand, 43494213 - 43494250
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttc 84  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  43494213 cgttttatgttattaacacggatgttgtgagtttgttc 43494250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 12439474 - 12439434
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttc 84  Q
    |||||||||||| |||||||||||||| ||||| |||||||    
T  12439474 tgtcgttttatgctattaacatggatgatgtgagtttgttc 12439434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 13422107 - 13422147
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgca 87  Q
    ||||||||| ||||||| |||||||||||| ||||||||||    
T  13422107 cgttttatgctattaacttggatgttgtgagtttgttcgca 13422147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 108
Target Start/End: Complemental strand, 18472515 - 18472455
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||||||| |||||||||||||| ||||| ||||||| ||| |||||  |||||| |||||    
T  18472515 gttttatgctattaacatggatgatgtgagtttgttcacagattcatcatttttgttttta 18472455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 19048428 - 19048356
Alignment:
Q  57 tattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgt 129  Q
    |||||| |||||||||||||||||||| |||  |||||| | |||| ||  ||||| ||||||| ||||||||    
T  19048428 tattaatatggatgttgtgaatttgtttgcaaattcattatatttgcttgcaacaattttgaatttgtgttgt 19048356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 26240482 - 26240438
Alignment:
Q  40 acactgtcgttttatgttattaacatggatgttgtgaatttgttc 84  Q
    |||||||||||||||| ||||||||| ||||||| || |||||||    
T  26240482 acactgtcgttttatgctattaacatagatgttgcgagtttgttc 26240438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 29154541 - 29154605
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||||||||||| |||||||||||||| ||||| | ||||||||  |||||  |||||| |||||    
T  29154541 tgtcgttttatgctattaacatggatgatgtgagtatgttcgcatattcatcatttttgttttta 29154605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 34866755 - 34866795
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgca 87  Q
    |||||| || |||||||||||||||||||| ||||||||||    
T  34866755 cgttttttgctattaacatggatgttgtgagtttgttcgca 34866795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 40775158 - 40775218
Alignment:
Q  126 ttgtatcggcgtattctatcaacttgaatgaattaatatcgtttatttttgtaaaacaaat 186  Q
    ||||||||  ||| |||||||| |||||||||| |||||| ||||||||||| ||| ||||    
T  40775158 ttgtatcgatgtactctatcaatttgaatgaatgaatatcatttatttttgtcaaaaaaat 40775218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 43148912 - 43148964
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttt 99  Q
    |||| |||| ||||||| |||||||||||| ||||||||||| ||||| ||||    
T  43148912 cgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccttt 43148964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 3e-29; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 44 - 181
Target Start/End: Complemental strand, 12654103 - 12653966
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| |||||||||||||| ||||| ||||||||||| |||||  |||||| ||||| | |||||| |  ||| ||||||||  ||| ||||    
T  12654103 tgtcgttttatgctattaacatggatgatgtgagtttgttcgcagattcatcatttttgtttttagcgactttggaattgtattgtatcgatgtactcta 12654004  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  12654003 tcaatttgaatgaatgaatatcgtttatttttgtaaaa 12653966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 8693453 - 8693319
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||| |||||   | |||| || ||| ||||||||  ||| |||||||    
T  8693453 cgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagtgaatttggatttgtattgtatcgatgtactctatca 8693354  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | |||||||||| ||||||||||||||||||||||    
T  8693353 atttgaatgaataaatatcgtttatttttgtaaaa 8693319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 30813396 - 30813526
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||| ||||| ||||||| ||||| | | ||||||| ||| ||||||||  ||| |||||||    
T  30813396 cgttttatgctattaacatggatgatgtgagtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtattgtatcgatgtactctatca 30813495  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  30813496 atttgaatgaatgaatatcgtttatttttgt 30813526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 19402634 - 19402500
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||  ||||| ||||||| ||  ||||| ||||||| ||||||| | |||| || ||| ||||||||  ||| |||||||    
T  19402634 cgttttatgctattaacatggatactgtgagtttgttcacatattcatcctttttgtttttaacgaatttggatttgtattgtatcgatgtactctatca 19402535  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | |||||||||| ||||||||||||||||||||||    
T  19402534 atttgaatgaatgaatatcgtttatttttgtaaaa 19402500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 177
Target Start/End: Original strand, 2488458 - 2488591
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| ||||||||| |||||||| | ||||||||||  || || ||||||| ||||||  |||||| || ||| ||||||||  ||| ||||    
T  2488458 tgtcgttttatgctattaacatagatgttgtaagtttgttcgcatatttatcctttttgtttttaatgactttggatttgtattgtatcgatgtactcta 2488557  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgt 177  Q
    |||| |||||||||| ||||||||||||||||||    
T  2488558 tcaatttgaatgaataaatatcgtttatttttgt 2488591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 12481209 - 12481031
Alignment:
Q  1 attccggagacttgaataatatagtcatatttgtagga-----tacactgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcatt 95  Q
    ||||||||||||||||||   ||||||||||||||||      |||  || ||||||||| |||||||||||||| ||||| ||||||| ||| |||||     
T  12481209 attccggagacttgaata---tagtcatatttgtaggcataggtaccttgccgttttatgctattaacatggatgatgtgagtttgttcacagattcatc 12481113  T
Q  96 ctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatgaattaatatcgtttatttttgt 177  Q
     |||||| ||||| ||| |||| || ||| ||||||||  ||| | |||||| |||||||||| ||||||||||||||||||    
T  12481112 ttttttgtttttagcaaatttggatttgtattgtatcgatgtactttatcaatttgaatgaatgaatatcgtttatttttgt 12481031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 6296031 - 6295901
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    |||||||||||||||||||||||||||||| ||||||| | | ||| |  |||||| ||||| ||| ||||||| ||| ||||||||  ||| |||||||    
T  6296031 cgttttatgttattaacatggatgttgtgagtttgttcacggattcgtcatttttgtttttagcaaatttgaatttgtattgtatcgatgtactctatca 6295932  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| |||||  |||||||||||    
T  6295931 atttgaatgaatgaatattatttatttttgt 6295901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 6302841 - 6302711
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    |||||||||||||||||||||||||||||| ||||||| | | ||| |  |||||| ||||| ||| ||||||| ||| ||||||||  ||| |||||||    
T  6302841 cgttttatgttattaacatggatgttgtgagtttgttcacggattcgtcatttttgtttttagcaaatttgaatttgtattgtatcgatgtactctatca 6302742  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| |||||  |||||||||||    
T  6302741 atttgaatgaatgaatattatttatttttgt 6302711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 15589907 - 15589777
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||||| || |||| ||| ||||| ||||||| ||||| ||| |||| || | | ||||||||  ||| |||||||    
T  15589907 cgttttatgctattaacatggatgctgtgagttggttcacagattcatcctttttgtttttagcaaatttggatttatattgtatcgatgtactctatca 15589808  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  15589807 atttgaatgaatgaatatcgtttatttttgt 15589777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 48 - 173
Target Start/End: Original strand, 14730945 - 14731070
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgc-aggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||||||||||||||||| ||||| ||||||||| |  ||||||||||||  ||||| | ||||||||||||| ||||||||  ||||  |||||    
T  14730945 gttttatgttattaacatggatgatgtgagtttgttcgcaaatttcattcttttt-attttagcgactttgaatatgtattgtatcgatgtatgttatca 14731043  T
Q  147 acttgaatgaattaatatcgtttattt 173  Q
    | |||||||||| |||||| |||||||    
T  14731044 atttgaatgaatgaatatcatttattt 14731070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 23654589 - 23654718
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||| ||||| ||||| | ||||| | | |||| || ||| ||||||||  ||| |||||||    
T  23654589 cgttttatgctattaacatggatgatgtgagtttgttcacagattcatcctttt-gtttttagcgaatttggatttgtattgtatcgatgtactctatca 23654687  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  23654688 atttgaatgaatgaatatcgtttatttttgt 23654718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 177
Target Start/End: Original strand, 4660764 - 4660897
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| |||||||||||||| ||||| |||||||  || ||||| ||||||| |||||   | |||| |  ||| ||||||||  ||| ||||    
T  4660764 tgtcgttttatgctattaacatggatgatgtgagtttgttcatagattcatcctttttgtttttagtgaatttggaattgtattgtatcgatgtactcta 4660863  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgt 177  Q
    |||| |||||||||| ||||||||||||||||||    
T  4660864 tcaatttgaatgaatgaatatcgtttatttttgt 4660897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 31705505 - 31705634
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    |||||||| ||||||||| |||||||||| ||||||| ||| || || ||||||  ||||| | | ||||||| ||| ||||||||  ||| ||||||||    
T  31705505 gttttatgctattaacatagatgttgtgagtttgttcacagatttatcctttttatttttagccaatttgaatttgtattgtatcgatgtactctatcaa 31705604  T
Q  148 cttgaatgaattaatatcgtttatttttgt 177  Q
     || ||||||| ||||||||||||||||||    
T  31705605 tttaaatgaatgaatatcgtttatttttgt 31705634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 23101190 - 23101056
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttg-gttttaacaactttgaatatgtgttgtatcggcgtattctatc 145  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| ||||| |||||||  ||||| |   |||| || ||| ||||||||  ||| ||||||    
T  23101190 cgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgttttttagcggatttggatttgtattgtatcgatgtactctatc 23101091  T
Q  146 aacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    || ||| |||||| ||||||||||||||||||||||    
T  23101090 aatttg-atgaatgaatatcgtttatttttgtaaaa 23101056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 4394109 - 4394239
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| ||||||||||||||||| || ||||||| ||| ||||| | ||||| ||||| ||| |||| || ||| |||||||   ||| |||||||    
T  4394109 cgttttatgctattaacatggatgttgagagtttgttcacagattcatccgttttgtttttagcaaatttggatttgtattgtatcaatgtactctatca 4394208  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||| | ||||||||    
T  4394209 atttgaatgaatgaatatcgctcatttttgt 4394239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 177
Target Start/End: Original strand, 8644549 - 8644676
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| |||||||||||||||||||| ||||||||||| |||||  || ||| |||||       ||||| ||  ||||||||  ||| ||||    
T  8644549 tgtcgttttatgctattaacatggatgttgtgagtttgttcgcagattcatctttcttgttttta------gtgaatttgcattgtatcgatgtactcta 8644642  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgt 177  Q
    |||| ||||||||||||||||| |||||||||||    
T  8644643 tcaatttgaatgaattaatatcatttatttttgt 8644676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 21507636 - 21507506
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||  ||||| ||||||| ||||| | | |||| || ||| |||||| |  ||| |||||||    
T  21507636 cgttttatgctattaacatggatgatgtgagtttgttcacatattcatcctttttgtttttagcgaatttggatttgtattgtattgatgtactctatca 21507537  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
      |||||||||| ||||||||||||||||||    
T  21507536 gtttgaatgaatgaatatcgtttatttttgt 21507506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 35219695 - 35219565
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| ||||||||| |||| | ||| ||||||| ||| ||||| ||||||| ||||| | | |||| || ||| ||||||||  ||| |||| ||    
T  35219695 cgttttatgctattaacattgatgctctgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctacca 35219596  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  35219595 atttgaatgaatgaatatcgtttatttttgt 35219565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 175
Target Start/End: Complemental strand, 29920702 - 29920571
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| |||||||||||||||||||| |||||||  || ||||| ||||||| ||||| | | ||| ||| |||  |||||||  ||| | ||    
T  29920702 tgtcgttttatgctattaacatggatgttgtgagtttgttcatagattcatcctttttgtttttagcgaatttaaatttgtaatgtatcgatgtacttta 29920603  T
Q  144 tcaacttgaatgaattaatatcgtttattttt 175  Q
    |||| |||||||||  ||||||||||| ||||    
T  29920602 tcaatttgaatgaacgaatatcgtttactttt 29920571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 14782935 - 14782807
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaac 148  Q
    ||||||| |||||||||||||  ||||| ||||||| ||| ||||| ||||||| ||||| | | |||| || ||| ||||||||  ||| ||||||||     
T  14782935 ttttatgctattaacatggataatgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaat 14782836  T
Q  149 ttgaatgaattaatatcgtttatttttgt 177  Q
    |||||||| | ||||||  ||||||||||    
T  14782835 ttgaatgactgaatatctattatttttgt 14782807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 15127924 - 15127860
Alignment:
Q  43 ctgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttt 107  Q
    |||| |||||||||||||||||||||||||||||||||||||| || || || |||||| |||||    
T  15127924 ctgttgttttatgttattaacatggatgttgtgaatttgttcgtagattgatccttttttgtttt 15127860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 35039016 - 35039088
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaat 120  Q
    |||||||| |||||||||||||||||||| ||||||||||| || ||  |||||| ||||||| |||||||||    
T  35039016 gttttatgctattaacatggatgttgtgagtttgttcgcagatttatcatttttgtttttaacgactttgaat 35039088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 131
Target Start/End: Complemental strand, 8978541 - 8978454
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtat 131  Q
    |||||||||||||||| |||||||||||||||| ||||||||||  |||||  |||||| ||||  | ||||||||| ||| ||||||    
T  8978541 tgtcgttttatgttatgaacatggatgttgtgagtttgttcgcaatttcatcttttttgtttttggcgactttgaatttgtattgtat 8978454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 181
Target Start/End: Original strand, 20496517 - 20496645
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||| ||||||||||||| ||||||||||| ||||| ||||||| ||||| |      |||| ||  |||||||   |||  ||||||    
T  20496517 cgttttatgctattaatatggatgttgtgagtttgttcgcagattcatcctttttgtttttagc------gaatttgcattgtatcaatgtacgctatca 20496610  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | |||||||||| |||||| |||||||||||||||    
T  20496611 atttgaatgaatgaatatcatttatttttgtaaaa 20496645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 181
Target Start/End: Original strand, 31680759 - 31680894
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttt-aacaactttgaatatgtgttgtatcggcgtattctatc 145  Q
    ||||||||| |||||| ||||| ||||||| |||||||  |  ||||||||||||| |||| ||| |||||  || ||| |||||||    || ||||||    
T  31680759 cgttttatgctattaatatggaagttgtgagtttgttcatatattcattctttttgttttttaacgactttagatttgtattgtatcaatatactctatc 31680858  T
Q  146 aacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    ||||||||||||| ||||| ||||| ||||||||||    
T  31680859 aacttgaatgaataaatattgtttacttttgtaaaa 31680894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 5417014 - 5416887
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| |||||||| || |||||  |||||| ||||| |||     ||| |||||||||||   ||| ||||| |    
T  5417014 cgttttatgctattaacatggatgttgtgagtttgttcgtagattcatcatttttgtttttagcaa-----aat-tgtgttgtatc-atgtactctatta 5416922  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | |||||||||| |||||| |||||||||||||||    
T  5416921 atttgaatgaatgaatatcatttatttttgtaaaa 5416887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 6127856 - 6127986
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| | |||||||||||| ||||| |||||| |||  ||||| ||||||| ||||| | ||||||||| | |  | || ||  ||| |||||||    
T  6127856 cgttttatgcttttaacatggatgatgtgagtttgtttgcaaattcatcctttttgcttttagctactttgaatttataatttaacgatgtactctatca 6127955  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||| ||||||||||    
T  6127956 atttgaatgaatgaatatcgcttatttttgt 6127986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 177
Target Start/End: Complemental strand, 21942210 - 21942093
Alignment:
Q  60 taacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatgaatt 159  Q
    ||||||||||||||||| |||||| |||| |||||  |||||  ||||||||| ||||||| | | || |||||  ||  |  ||||| |||||||||||    
T  21942210 taacatggatgttgtgagtttgtttgcagattcatcatttttatttttaacaattttgaatttttattatatcgatgtgctacatcaatttgaatgaatt 21942111  T
Q  160 aatatcgtttatttttgt 177  Q
    |||||| |||||||||||    
T  21942110 aatatcatttatttttgt 21942093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 28943559 - 28943652
Alignment:
Q  18 aatatagtcatatttgtaggatacactgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaaca 111  Q
    ||||||||||| | |||||| |||  ||| ||||||||||||||||||| || |||||| |||||| |||| ||||| ||||| | ||||||||    
T  28943559 aatatagtcatgtatgtagggtactttgtggttttatgttattaacatgtattttgtgagtttgtttgcagattcatccttttcgtttttaaca 28943652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 892607 - 892678
Alignment:
Q  46 tcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttg 117  Q
    ||||||||| |||||||||||||||| |||| ||||||||||| | |||  |||||| ||||||||| ||||    
T  892607 tcgttttatattattaacatggatgtcgtgagtttgttcgcagatccatcatttttgtttttaacaaatttg 892678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 2304620 - 2304490
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||||||||||||||||| |||||| ||||||| |   || ||  |||||| ||||| | | ||| ||| ||| ||| ||||  ||| |||||||    
T  2304620 cgttttatgttattaacatggatattgtgagtttgttcactaatttatcttttttgtttttagcgaatttaaatttgtattgcatcgatgtactctatca 2304521  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | || ||||||| ||||||||||| ||||||    
T  2304520 atttaaatgaatgaatatcgtttacttttgt 2304490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 186
Target Start/End: Complemental strand, 4663608 - 4663477
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaac 148  Q
    ||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||  ||||| |      |||| |   ||||||||  ||| |||| |||     
T  4663608 ttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttatttttagc------gaattttcattgtatcgatgtactctaccaat 4663515  T
Q  149 ttgaatgaattaatatcgtttatttttgtaaaacaaat 186  Q
    |||||||||| ||||| |||||||||||||||| ||||    
T  4663514 ttgaatgaatgaatattgtttatttttgtaaaaaaaat 4663477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 548665 - 548608
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttttt 101  Q
    |||||||||||| |||||||||||||||||||| | ||||| ||| ||||| ||||||    
T  548665 tgtcgttttatgctattaacatggatgttgtgagtctgttcacagattcatccttttt 548608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 31748281 - 31748342
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||||| ||||||||||||||||||||  |||||| ||| ||||| ||||||| |||||    
T  31748281 cgttttatgctattaacatggatgttgtgagcttgttcacagattcatcctttttgttttta 31748342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 13871406 - 13871354
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttt 100  Q
    |||||||| |||||||||||||||||||| ||||||| ||| ||||| |||||    
T  13871406 gttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttt 13871354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 177
Target Start/End: Complemental strand, 31936401 - 31936285
Alignment:
Q  61 aacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatgaatta 160  Q
    ||||| |||||||||| ||||||| ||  ||||| ||||| | ||||| | | |||  |||||| |||||||   ||| |||||||| |||||||||  |    
T  31936401 aacatagatgttgtgagtttgttcacatattcatccttttcgtttttagcgaatttagatatgtattgtatctatgtactctatcaatttgaatgaacga 31936302  T
Q  161 atatcgtttatttttgt 177  Q
    |||||||||||||||||    
T  31936301 atatcgtttatttttgt 31936285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 34020924 - 34020988
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||||||||||| |||||||||| ||| ||||| ||||||| ||| ||||| ||||||| |||||    
T  34020924 tgtcgttttatgctattaacatgtatgatgtgagtttgttcacagattcatcctttttgttttta 34020988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 5146308 - 5146395
Alignment:
Q  90 ttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatgaattaatatcgtttatttttgt 177  Q
    ||||| ||||||| ||||| | | |||| || ||| || |||||  ||| |||||||| |||||||||| ||||||||||||||||||    
T  5146308 ttcatcctttttgtttttagcgaatttggatttgtattatatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 5146395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 99
Target Start/End: Complemental strand, 12059670 - 12059615
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttt 99  Q
    ||||||| |||| ||||||| |||||||||||| ||||||||||| ||||| ||||    
T  12059670 tgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccttt 12059615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 99
Target Start/End: Original strand, 25064416 - 25064471
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttt 99  Q
    ||||||| |||| ||||||| |||||||||||| ||||||||||| ||||| ||||    
T  25064416 tgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccttt 25064471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 23637892 - 23637774
Alignment:
Q  59 ttaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatgaat 158  Q
    |||||||||||  ||||| ||||||| ||  |||||  |||||| ||||| |||  |||||| ||| ||||||||  ||| | ||| || ||||||||||    
T  23637892 ttaacatggatactgtgagtttgttcacatattcatcatttttgtttttagcaaaattgaatttgtattgtatcgatgtactttattaatttgaatgaat 23637793  T
Q  159 taatatcgtttatttttgt 177  Q
     ||| ||||||||||||||    
T  23637792 gaatgtcgtttatttttgt 23637774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 29285150 - 29285200
Alignment:
Q  136 gtattctatcaacttgaatgaattaatatcgtttatttttgtaaaacaaat 186  Q
    ||||| |||||| |||||||||| |||||||||||||||| ||||| ||||    
T  29285150 gtattatatcaatttgaatgaataaatatcgtttatttttataaaaaaaat 29285200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 77
Target Start/End: Original strand, 7049566 - 7049599
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaa 77  Q
    |||||||||||| |||||||||||||||||||||    
T  7049566 tgtcgttttatgctattaacatggatgttgtgaa 7049599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 31804625 - 31804666
Alignment:
Q  140 tctatcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||||||| || ||||||| ||||||||||||||||||||||    
T  31804625 tctatcaatttaaatgaataaatatcgtttatttttgtaaaa 31804666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 5084976 - 5085008
Alignment:
Q  149 ttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||||||||| ||||||||||||||||||||||    
T  5084976 ttgaatgaatgaatatcgtttatttttgtaaaa 5085008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 7880996 - 7880944
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttt 99  Q
    |||| |||| ||||||| |||||| ||||| ||||||||||| ||||||||||    
T  7880996 cgttatatgctattaacttggatgctgtgactttgttcgcagattcattcttt 7880944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 76
Target Start/End: Complemental strand, 13233901 - 13233869
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtga 76  Q
    |||||||||||| ||||||||||||||||||||    
T  13233901 tgtcgttttatgctattaacatggatgttgtga 13233869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 76
Target Start/End: Original strand, 20845329 - 20845361
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtga 76  Q
    |||||||||||| ||||||||||||||||||||    
T  20845329 tgtcgttttatgctattaacatggatgttgtga 20845361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 29285073 - 29285113
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgca 87  Q
    |||||||||||||||||||| |||| |||| ||||||||||    
T  29285073 cgttttatgttattaacatgaatgtcgtgagtttgttcgca 29285113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 3e-29; HSPs: 86)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 44 - 177
Target Start/End: Original strand, 42197889 - 42198022
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| |||| ||||||||||||||| ||||||| ||| | ||| ||||||| ||||| ||| ||||||| ||| ||||||||  ||| ||||    
T  42197889 tgtcgttttatgctattgacatggatgttgtgagtttgttcacagatccatcctttttgtttttagcaaatttgaatttgtattgtatcgatgtactcta 42197988  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgt 177  Q
    |||| |||||||||| ||||||||||||||||||    
T  42197989 tcaatttgaatgaatgaatatcgtttatttttgt 42198022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 45350852 - 45350722
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    |||||||||||||||||||||||||||||| ||||||| ||| ||||  ||||||| ||||| | | |||| || ||| ||||||||  ||| |||||||    
T  45350852 cgttttatgttattaacatggatgttgtgagtttgttcacagattcaccctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatca 45350753  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  45350752 atttgaatgaatgaatatcgtttatttttgt 45350722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 45360331 - 45360201
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    |||||||||||||||||||||||||||||| ||||||| ||| ||||  ||||||| ||||| | | |||| || ||| ||||||||  ||| |||||||    
T  45360331 cgttttatgttattaacatggatgttgtgagtttgttcacagattcaccctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatca 45360232  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  45360231 atttgaatgaatgaatatcgtttatttttgt 45360201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 43244160 - 43244033
Alignment:
Q  50 tttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaact 149  Q
    |||||| |||||||||||||||||||| ||||||  ||| ||||| ||||||| ||||| | | |||| || ||| ||||||||| ||| |||||||| |    
T  43244160 tttatgctattaacatggatgttgtgagtttgtttacagattcatcctttttgtttttagcgaatttggatttgtattgtatcggtgtactctatcaatt 43244061  T
Q  150 tgaatgaattaatatcgtttatttttgt 177  Q
    ||||||||| ||||||||||||||||||    
T  43244060 tgaatgaatgaatatcgtttatttttgt 43244033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 394056 - 393926
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| ||||  ||||||| ||||||| | |||| || ||| ||||||||  ||| | |||||    
T  394056 cgttttatgctattaacatggatgttgtgagtttgttcacagattcaccctttttgtttttaacgaatttggatttgtattgtatcgatgtactttatca 393957  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  393956 atttgaatgaatgaatatcgtttatttttgt 393926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 177
Target Start/End: Original strand, 27091044 - 27091177
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| ||||||||| |||||||| | ||||||||||  || || ||||||| ||||||  |||||| || ||| ||||||||  ||| ||||    
T  27091044 tgtcgttttatgctattaacatagatgttgtaagtttgttcgcatatttatcctttttgtttttaatgactttggatttgtattgtatcgatgtactcta 27091143  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgt 177  Q
    |||| |||||||||| ||||||||||||||||||    
T  27091144 tcaatttgaatgaataaatatcgtttatttttgt 27091177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 31522285 - 31522424
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||| ||||||||||| ||||||| ||| ||||| ||||||| ||||| | | |||| |  ||| ||||||||  ||| |||||||    
T  31522285 cgttttatgctattaacaaggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttggacttgtattgtatcgatgtactctatca 31522384  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaacaaat 186  Q
    | |||||||||| |||||||||||||| ||||||| ||||    
T  31522385 atttgaatgaatgaatatcgtttatttctgtaaaaaaaat 31522424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 477803 - 477669
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| |||||  |||||| ||||| | | ||||||| |||  ||||||   ||| ||||||     
T  477803 cgttttatgctattaacatggatgttgtgagtttgttcacagattcatcgtttttgtttttagcgaatttgaatttgtactgtatcaatgtactctatcg 477704  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | |||||||||| ||||||||||||||||||||||    
T  477703 atttgaatgaatgaatatcgtttatttttgtaaaa 477669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 7083603 - 7083469
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||  ||||| | | ||||||| | | ||||||||  ||| |||||||    
T  7083603 cgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttatttttagcgaatttgaatttatattgtatcgatgtactctatca 7083504  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | |||| ||||| |||||||||||||||| |||||    
T  7083503 atttgagtgaatgaatatcgtttatttttttaaaa 7083469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 6912020 - 6912149
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    |||||||| |||||||||||||| ||||| ||||||| ||| ||||| ||||||| ||||| | | ||||||| ||| |||||| |  ||| ||||||||    
T  6912020 gttttatgctattaacatggatgatgtgagtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtattgtattgatgtactctatcaa 6912119  T
Q  148 cttgaatgaattaatatcgtttatttttgt 177  Q
     |||||||||| |||| |||||||||||||    
T  6912120 tttgaatgaatgaataacgtttatttttgt 6912149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 7060652 - 7060781
Alignment:
Q  46 tcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatc 145  Q
    |||||||||| |||||||||||||||||||| ||||||| ||  ||||| ||||||| ||||| | | |||| || ||| |||||||   ||| ||||||    
T  7060652 tcgttttatgctattaacatggatgttgtgagtttgttcacattttcatcctttttgtttttagcgaatttggatttgtattgtatcaatgtactctatc 7060751  T
Q  146 aacttgaatgaattaatatcgtttattttt 175  Q
    || |||||||||| ||||||||||||||||    
T  7060752 aatttgaatgaatgaatatcgtttattttt 7060781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 181
Target Start/End: Original strand, 7084279 - 7084415
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgtt--gtatcggcgtattctat 144  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||| ||||| ||||||| ||||| | | |||| || ||| ||  ||||||  ||| |||||    
T  7084279 cgttttatgctattaacatggatgatgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattatgtatcgatgtactctat 7084378  T
Q  145 caacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    ||| |||||||||| ||||||||||||||||||||||    
T  7084379 caatttgaatgaatgaatatcgtttatttttgtaaaa 7084415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 56236647 - 56236474
Alignment:
Q  18 aatatagtcatatttgtag-----gatacactgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaa 112  Q
    |||||| ||||||||||||     |||||| || ||||||||| |||||||||||||  ||| ||||||||| ||| || || ||||||| ||||| | |    
T  56236647 aatataatcatatttgtaggcatagatacattgccgttttatgctattaacatggataatgtaaatttgttcacagatttatcctttttgtttttagcga 56236548  T
Q  113 ctttgaatatgtgttgtatcggcgtattctatcaacttgaatgaattaatatcgtttatttttgtaaaacaaat 186  Q
     |||| |||||| ||||||||  ||| |||||||| |||||||||| |||||| ||||||||||| ||| ||||    
T  56236547 ttttggatatgtattgtatcgatgtactctatcaatttgaatgaatgaatatcatttatttttgtcaaaaaaat 56236474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 175
Target Start/End: Complemental strand, 626341 - 626213
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| ||||||||||||||||||||  |||||| ||  ||||| ||||||| ||||| ||| ||||||| ||| ||||||||  ||| |||||||    
T  626341 cgttttatgctattaacatggatgttgtgagcttgttcacatattcatcctttttgtttttagcaaatttgaatttgtattgtatcgatgtactctatca 626242  T
Q  147 acttgaatgaattaatatcgtttattttt 175  Q
    | |||||||||| ||| || |||||||||    
T  626241 atttgaatgaatgaatttcatttattttt 626213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 181
Target Start/End: Original strand, 41837663 - 41837787
Alignment:
Q  57 tattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatga 156  Q
    ||||||||| |||| ||||| |||||||| || |||||||| |||| ||||||| ||||||||| |||  ||||| |  ||| |||||||| ||||||||    
T  41837663 tattaacatagatgctgtgagtttgttcggagattcattctctttgtttttaacgactttgaatttgtagtgtattgatgtactctatcaatttgaatga 41837762  T
Q  157 attaatatcgtttatttttgtaaaa 181  Q
    || | ||||||||||||||||||||    
T  41837763 ataattatcgtttatttttgtaaaa 41837787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 18502624 - 18502485
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||  ||||| ||||||| ||| ||||| ||||||| ||||| | | |||| || ||| ||||||||  ||| |||||||    
T  18502624 cgttttatgctattaacatggattctgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatca 18502525  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaacaaat 186  Q
    | || ||||||| |||||||||||||||||| ||| ||||    
T  18502524 atttaaatgaatgaatatcgtttatttttgtcaaaaaaat 18502485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 36124136 - 36124009
Alignment:
Q  50 tttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaact 149  Q
    |||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||| ||||| | | |||| || ||| ||||||||  | | |||||||| |    
T  36124136 tttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatggactctatcaatt 36124037  T
Q  150 tgaatgaattaatatcgtttatttttgt 177  Q
    |||| |||| ||||||||||||||||||    
T  36124036 tgaaagaatgaatatcgtttatttttgt 36124009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 13965882 - 13966012
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||||| ||||||  ||| ||||| ||||||| |||||   | |||| || ||| ||||||||  ||| |||||||    
T  13965882 cgttttatgctattaacatggatgctgtgagtttgttaacagattcatcctttttgtttttagggaatttggatttgtattgtatcgatgtactctatca 13965981  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  13965982 atttgaatgaatgaatatcgtttatttttgt 13966012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 20887539 - 20887409
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| |||||  |||||| ||||| | | |||| || | | ||||||||  ||| |||||||    
T  20887539 cgttttatgatattaacatggatgttgtgagtttgttcacagattcatcttttttgtttttagcgaatttggatttatattgtatcgatgtactctatca 20887440  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | || ||||||| ||||||||||||||||||    
T  20887439 atttaaatgaatgaatatcgtttatttttgt 20887409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 48 - 174
Target Start/End: Original strand, 31932587 - 31932713
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    |||||||| |||||||||||||||| ||| ||||||||||  ||||| ||||||| ||||||| | ||||||| ||| |||| |||  ||| | ||||||    
T  31932587 gttttatgctattaacatggatgttatgagtttgttcgcatattcatactttttgtttttaacgattttgaatttgtattgtgtcgatgtactttatcaa 31932686  T
Q  148 cttgaatgaattaatatcgtttatttt 174  Q
     |||||||||| |||||||||| ||||    
T  31932687 tttgaatgaatgaatatcgtttttttt 31932713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 173
Target Start/End: Complemental strand, 38943973 - 38943813
Alignment:
Q  18 aatatagtcatatttgtagg-----atacactgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaa 112  Q
    ||||||||||||||||||||     ||||  |||||||||||| |||||||||||||| | ||| ||||||| ||| ||||| ||||||| ||||| |      
T  38943973 aatatagtcatatttgtaggcataaatactttgtcgttttatgctattaacatggatgatatgagtttgttcacagattcatcctttttgtttttagcgg 38943874  T
Q  113 ctttgaatatgtgttgtatcggcgtattctatcaacttgaatgaattaatatcgtttattt 173  Q
     |||| || ||| ||||||||  ||| |||||||| |||||||||| |||||| |||||||    
T  38943873 atttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcatttattt 38943813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 176
Target Start/End: Complemental strand, 44756812 - 44756692
Alignment:
Q  56 ttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatg 155  Q
    ||||||||||||||| ||||||||||||| ||| ||||| ||||||| ||||| | | ||||||| | | ||||| ||  ||| |||||||| ||| |||    
T  44756812 ttattaacatggatgctgtgaatttgttcacagattcatcctttttgtttttagcgaatttgaatttctattgtaccgatgtactctatcaatttggatg 44756713  T
Q  156 aattaatatcgtttatttttg 176  Q
    ||| |||||||||||||||||    
T  44756712 aatgaatatcgtttatttttg 44756692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 186
Target Start/End: Original strand, 56172144 - 56172291
Alignment:
Q  39 tacactgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgta 138  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||  ||||||| |||  |  |||||  || ||| |||||||   |||    
T  56172144 tacattgtcgttttatgttattaacatggatgttgtgagtttgttcgcagattcaacctttttgttttctatgactttatatttgtattgtatcaatgta 56172243  T
Q  139 ttctatcaacttgaatgaattaatatcgtttatttttgtaaaacaaat 186  Q
     |||||||| ||||||  || |||||| ||||||||||| ||| ||||    
T  56172244 gtctatcaatttgaatacatgaatatcatttatttttgttaaaaaaat 56172291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 181
Target Start/End: Complemental strand, 4959363 - 4959236
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    |||||||| ||||||||| |||||||||| |||||||||| |||||||||||||| ||||||||| |||| |      ||||| ||  ||| | ||||||    
T  4959363 gttttatgctattaacattgatgttgtgagtttgttcgcatgttcattctttttgtttttaacaaatttgca------ttgtaacgatgtactttatcaa 4959270  T
Q  148 cttgaatgaattaatatcgtttatttttgtaaaa 181  Q
      ||||||||| |||||| |||||||||||||||    
T  4959269 tatgaatgaatgaatatcatttatttttgtaaaa 4959236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 181
Target Start/End: Original strand, 8712843 - 8712981
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaaca-actttgaatatgtgttgtatcggcgtattct 142  Q
    |||||||||||| |||||||||||||| ||||| ||||||| ||  ||||| |||||| ||||| |   | |||  || ||| ||||||||  ||| |||    
T  8712843 tgtcgttttatgctattaacatggatgatgtgagtttgttcacaaattcatccttttttgtttttagtgaatttagatttgtattgtatcgatgtactct 8712942  T
Q  143 atcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  8712943 atcaatttgaatgaataaatatcgtttatttttgtaaaa 8712981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 177
Target Start/End: Complemental strand, 8517240 - 8517111
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    |||||||| ||||||||||||| |||| | ||||||| ||  ||||| ||||||| ||||| | | |||| || ||| |||||||   ||| ||||||||    
T  8517240 gttttatgctattaacatggatattgttagtttgttcacaaattcatcctttttgtttttagcgaatttggatttgtattgtatcaatgtactctatcaa 8517141  T
Q  148 cttgaatgaattaatatcgtttatttttgt 177  Q
     |||||||||| ||||||||||||||||||    
T  8517140 tttgaatgaatgaatatcgtttatttttgt 8517111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 181
Target Start/End: Complemental strand, 11210098 - 11209961
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| ||||| |||||||||||||| ||||||| ||| ||||| |||| || |||||   | |||| || ||  |||||| |  ||| ||||    
T  11210098 tgtcgttttatgctattatcatggatgttgtgagtttgttcacagattcatcctttatgtttttagtgaatttggatttgcattgtattgatgtactcta 11209999  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||| |||||||||| |||||| |||||||||||||||    
T  11209998 tcaatttgaatgaatgaatatcttttatttttgtaaaa 11209961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 181
Target Start/End: Original strand, 37431496 - 37431629
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    |||||| ||||||||||||||||||||||||| |||| ||| |||||   ||||  ||||| ||| ||||||| ||| ||||||||   || ||||||||    
T  37431496 gttttacgttattaacatggatgttgtgaattcgttcacagattcatcagttttatttttagcaattttgaatttgtattgtatcgatatactctatcaa 37431595  T
Q  148 cttgaatgaattaatatcgtttatttttgtaaaa 181  Q
     || || |||  ||||||||||||||||||||||    
T  37431596 tttaaaagaaagaatatcgtttatttttgtaaaa 37431629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 181
Target Start/End: Original strand, 2945462 - 2945590
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    |||||| ||||||||||||||||| ||||| ||||||||||  ||||| ||||||| ||||| |      |||| ||  | ||||||  ||| |||||||    
T  2945462 cgttttttgttattaacatggatgctgtgagtttgttcgcatattcatcctttttgtttttagc------gaatttgcatcgtatcgatgtactctatca 2945555  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | ||||||||||||||||| |||||||||||||||    
T  2945556 atttgaatgaattaatatcatttatttttgtaaaa 2945590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 158
Target Start/End: Complemental strand, 7860991 - 7860880
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| ||||||||| |||||||||| ||| ||  ||| ||||||||||||| ||||||| | ||||||| |||  |||||||  |||||||||||    
T  7860991 cgttttatgctattaacatagatgttgtgagtttatttacagattcattctttttgtttttaacgaatttgaatttgtactgtatcgatgtattctatca 7860892  T
Q  147 acttgaatgaat 158  Q
    | ||||| ||||    
T  7860891 atttgaaagaat 7860880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 174
Target Start/End: Original strand, 39837933 - 39838060
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| ||||| |||||||||||||| ||||||| ||| ||||| ||||||| ||||| ||| |||| || | | |||||| |   || |||| ||    
T  39837933 cgttttatgctattaccatggatgttgtgagtttgttcacagattcatcctttttgtttttagcaaatttggatttctattgtattgatatactctaaca 39838032  T
Q  147 acttgaatgaattaatatcgtttatttt 174  Q
    | |||||||||| |||||||||||||||    
T  39838033 atttgaatgaatgaatatcgtttatttt 39838060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 175
Target Start/End: Original strand, 46268002 - 46268132
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| |||||||||||||||||||| ||||||  ||  ||||| ||| ||| |||| || | |||| || ||| ||||||||  ||| ||||    
T  46268002 tgtcgttttatgctattaacatggatgttgtgagtttgtt-acatattcatccttgttgtttttgacgaatttgtatttgtattgtatcgatgtactcta 46268100  T
Q  144 tcaacttgaatgaattaatatcgtttattttt 175  Q
    |||| || ||||||| ||||||||||||||||    
T  46268101 tcaatttaaatgaataaatatcgtttattttt 46268132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 29266685 - 29266556
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||| |||| || ||||| || || | | ||||||| ||| |||||||   ||| |||||||    
T  29266685 cgttttatgctattaacatggatgctgtgagtttgttcacagtttca-tccttttgtttctagcgaatttgaatttgtattgtatcaatgtactctatca 29266587  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||| ||||||    
T  29266586 atttgaatgaatgaatatcgtttacttttgt 29266556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 29589154 - 29589088
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaac 110  Q
    |||||||||||| |||||||||||||| ||||||||||||| ||| ||||| ||||||| |||||||    
T  29589154 tgtcgttttatgctattaacatggatgatgtgaatttgttcacagattcatcctttttgtttttaac 29589088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 55600328 - 55600194
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| |||||||||| || ||  || || ||||||| |||||   | |||  || ||| ||||||||  | | |||||||    
T  55600328 cgttttatgctattaacatggatgatgtgaatttgatcacaaatttatcctttttgtttttagtgattttagatttgtattgtatcgatgcactctatca 55600229  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | |||||||||| ||||||||||||||||||||||    
T  55600228 atttgaatgaatgaatatcgtttatttttgtaaaa 55600194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 3159302 - 3159431
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    |||| ||| ||||||||||||| ||||||  ||||| |||| ||||| ||||||| |||||   ||||||||| ||| ||||||||  ||| | ||||||    
T  3159302 gtttcatgctattaacatggatattgtgagattgtttgcagattcatcctttttgtttttagtgactttgaatttgtattgtatcgatgtactttatcaa 3159401  T
Q  148 cttgaatgaattaatatcgtttatttttgt 177  Q
     |||||||||| ||||| ||||| ||||||    
T  3159402 tttgaatgaatgaatatagtttaattttgt 3159431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 181
Target Start/End: Complemental strand, 3171408 - 3171272
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| |||||||||| ||||||||| |||||||  |  |||||  |||||  ||||||  ||||||||| ||| |||||||  |||| | ||    
T  3171408 tgtcgttttatgctattaacatgtatgttgtgagtttgttcttat-ttcatcatttttatttttaagtactttgaatttgtattgtatcaacgtactata 3171310  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||| |||||||||| ||||| |||| |||||||||||    
T  3171309 tcaatttgaatgaataaatattgtttgtttttgtaaaa 3171272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 177
Target Start/End: Original strand, 6882300 - 6882413
Alignment:
Q  64 atggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatgaattaata 163  Q
    ||||||||||||| |||||||  || ||||| ||||||| ||||| | | |||| || ||| ||||||||  ||| |||||||| |||||||||| ||||    
T  6882300 atggatgttgtgagtttgttcagagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaata 6882399  T
Q  164 tcgtttatttttgt 177  Q
    ||||||| ||||||    
T  6882400 tcgtttacttttgt 6882413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 5814672 - 5814800
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaac 148  Q
    ||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||  ||||| | | ||||||| ||| |||||| |  ||| |||||||      
T  5814672 ttttatgctattaacatggatgttgtgagtttgttcacagattcatccttttttcttttagctaatttgaatttgtattgtattgatgtactctatcagt 5814771  T
Q  149 ttgaatgaattaatatcgtttatttttgt 177  Q
     ||||||||| ||| || |||||||||||    
T  5814772 ctgaatgaatgaatgtcttttatttttgt 5814800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 175
Target Start/End: Original strand, 30202377 - 30202505
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||| || || | | |||  || ||| |||||| |  ||| |||||||    
T  30202377 cgttttatgctattaacatggatgttgtgagtttgttcacagtttcatcctttttgtttctagcgaatttagatttgtattgtatagatgtactctatca 30202476  T
Q  147 acttgaatgaattaatatcgtttattttt 175  Q
    | |||| ||||| ||||||||||| ||||    
T  30202477 atttgattgaatgaatatcgtttactttt 30202505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 43157098 - 43157162
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||| |||||    
T  43157098 tgtcgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgttttta 43157162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 46829728 - 46829792
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||| |||||||||||||||||| ||||||||| |||||| |||| ||||||||||||| |||||    
T  46829728 tgtcattttatgttattaacatgaatgttgtgagtttgtttgcagattcattctttttgttttta 46829792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 110
Target Start/End: Original strand, 47466241 - 47466304
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaac 110  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||| |||||||    
T  47466241 cgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttaac 47466304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 181
Target Start/End: Complemental strand, 12716913 - 12716780
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    |||||||  |||||| ||||||||||||| ||| ||||||| |||||  || ||  |||||    |||||||||||| ||||||||  ||| | ||||||    
T  12716913 gttttatactattaatatggatgttgtgagtttcttcgcagattcatcattcttatttttagtgcctttgaatatgtattgtatcgatgtaatttatcaa 12716814  T
Q  148 cttgaatgaattaatatcgtttatttttgtaaaa 181  Q
     |||||| ||| |||||||||||||||| |||||    
T  12716813 tttgaataaatgaatatcgtttatttttataaaa 12716780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 29474118 - 29474057
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||| |||||    
T  29474118 cgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgttttta 29474057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 177
Target Start/End: Complemental strand, 24611570 - 24611450
Alignment:
Q  57 tattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatga 156  Q
    |||||||||||||| ||||| ||||||| ||| ||||| ||||||| ||||| | | |||  || ||| |||||||   ||| |||||||| ||||||||    
T  24611570 tattaacatggatgctgtgagtttgttcacagattcatcctttttgtttttagcgaatttagatttgtattgtatcaatgtactctatcaatttgaatga 24611471  T
Q  157 attaatatcgtttatttttgt 177  Q
    || |||||| |||| ||||||    
T  24611470 atgaatatcatttacttttgt 24611450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 6082221 - 6082158
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaac 110  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| |||||  |||||| |||||||    
T  6082221 cgttttatgctattaacatggatgttgtgagtttgttcacagattcatcttttttgtttttaac 6082158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 158
Target Start/End: Complemental strand, 20399688 - 20399573
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattc-tttttggttttaacaactttgaatatgtgttgtatcggcgtattct 142  Q
    |||||||||||| ||||| |||||||||||||| ||||||| | | ||||| | |||||| ||||  | | ||||||| ||| ||||||||  ||| |||    
T  20399688 tgtcgttttatgctattaccatggatgttgtgagtttgttcacggattcatccttttttgcttttggcgaatttgaatttgtattgtatcgatgtagtct 20399589  T
Q  143 atcaacttgaatgaat 158  Q
    ||||| ||||||||||    
T  20399588 atcaatttgaatgaat 20399573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 46728710 - 46728586
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    |||||||| ||||||||||||||| ||||| ||||||| ||| ||||| ||||||| ||||| |      |||| |   ||||||||  ||| |||| ||    
T  46728710 cgttttatattattaacatggatgctgtgagtttgttcacagattcatcctttttgtttttagc------gaattttcattgtatcgatgtactctacca 46728617  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | ||||||||||||||||| |||||||||||    
T  46728616 atttgaatgaattaatatcatttatttttgt 46728586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 22757424 - 22757478
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttttt 101  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||    
T  22757424 cgttttatgctattaacatggatgttgtgagtttgttcacagattcatccttttt 22757478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 110
Target Start/End: Original strand, 28990623 - 28990685
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaac 110  Q
    |||||||| |||||||||||||||||||| ||||||||||| || ||  |||||| |||||||    
T  28990623 gttttatgctattaacatggatgttgtgagtttgttcgcagatttatcgtttttgtttttaac 28990685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 186
Target Start/End: Complemental strand, 40198333 - 40198200
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    ||||||||||||||||| | ||||||||| |||||||| ||  ||||  |||||| ||||||| |||||||||     |||||| |  ||| |||||||     
T  40198333 gttttatgttattaacaggaatgttgtgagtttgttcgtagactcatcatttttgtttttaacgactttgaat-----ttgtattgatgtactctatcat 40198239  T
Q  148 cttgaatgaattaatatcgtttatttttgtaaaacaaat 186  Q
     |||||||||  |||||| ||||||||||| ||| ||||    
T  40198238 tttgaatgaaagaatatcatttatttttgtcaaaaaaat 40198200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 3673812 - 3673877
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaa 112  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| ||| | ||||||  |||||||||    
T  3673812 cgttttatgctattaacatggatgttgtgagtttgttcacagattcgtcctttttatttttaacaa 3673877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 24826071 - 24826112
Alignment:
Q  140 tctatcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||||||| |||||||||| ||||||||||||||||||||||    
T  24826071 tctatcaatttgaatgaatgaatatcgtttatttttgtaaaa 24826112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 38435009 - 38435050
Alignment:
Q  140 tctatcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||||||| |||||||||| ||||||||||||||||||||||    
T  38435009 tctatcaatttgaatgaatgaatatcgtttatttttgtaaaa 38435050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 6789666 - 6789614
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttt 100  Q
    |||||||| |||||||||||||||||||| ||| ||||||| ||||| |||||    
T  6789666 gttttatgctattaacatggatgttgtgagtttattcgcagattcatcctttt 6789614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 11299924 - 11299872
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttt 99  Q
    ||||||||||||||||| ||| |||||||| ||||||||||| ||||| ||||    
T  11299924 cgttttatgttattaacttgggtgttgtgagtttgttcgcagattcatccttt 11299872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 19885759 - 19885695
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||| || ||| ||||||||||| || ||||| ||||||||||| ||||||||||||| |||||    
T  19885759 tgtcgcttcatgatattaacatggctgctgtgagtttgttcgcagattcattctttttgttttta 19885695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 26576289 - 26576233
Alignment:
Q  51 ttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttt 107  Q
    ||||||||||| |||||||||||||||||||||| ||  ||||| ||||||| ||||    
T  26576289 ttatgttattatcatggatgttgtgaatttgttcacaaattcatcctttttgttttt 26576233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 30416418 - 30416358
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttt 107  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||| ||||| |||||| |||||    
T  30416418 cgttttatgctattaacatggatgatgtgagtttgttcacagattcatcctttttcgtttt 30416358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 32616641 - 32616510
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| ||||| ||||||||||  || ||||||| ||  |||||  |||||| ||||| | | ||||||| ||| || |||||  ||| |||||||    
T  32616641 cgttttatgctattagcatggatgttaagagtttgttcacatattcatcttttttgtttttagcgaatttgaatttgtattatatcgatgtactctatca 32616542  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | |||||||||| |||   ||||||||||||||||    
T  32616541 atttgaatgaatgaat---gtttatttttgtaaaa 32616510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 33020720 - 33020656
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||| ||||||| ||||||||||||||| |||||||||||  ||| ||||| ||||||| |||||    
T  33020720 tgtcattttatgctattaacatggatgtcgtgaatttgttaacagattcatcctttttgttttta 33020656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 76
Target Start/End: Complemental strand, 37869210 - 37869178
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtga 76  Q
    |||||||||||||||||||||||||||||||||    
T  37869210 tgtcgttttatgttattaacatggatgttgtga 37869178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 44947607 - 44947659
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttt 99  Q
    |||| |||||||||||| |||||||||||| ||||||||||| ||||| ||||    
T  44947607 cgttatatgttattaacttggatgttgtgagtttgttcgcagattcatccttt 44947659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 108
Target Start/End: Complemental strand, 50981503 - 50981443
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||||||| |||||||||||||||||||| ||||||| ||  ||||| ||||||| |||||    
T  50981503 gttttatgatattaacatggatgttgtgagtttgttcacaaattcatactttttgttttta 50981443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 51646421 - 51646481
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttt 107  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||| ||||| ||||||| ||||    
T  51646421 cgttttatgctattaacatggatgctgtgagtttgttcacagattcatcctttttgttttt 51646481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 4622496 - 4622453
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgca 87  Q
    |||||||||||| |||||||||||||| ||||| ||||||||||    
T  4622496 tgtcgttttatgctattaacatggatgatgtgagtttgttcgca 4622453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 14346828 - 14346879
Alignment:
Q  126 ttgtatcggcgtattctatcaacttgaatgaattaatatcgtttatttttgt 177  Q
    ||||||||  ||| |||||||| |||||||||| ||||||||||||||||||    
T  14346828 ttgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 14346879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 83
Target Start/End: Complemental strand, 22049200 - 22049165
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgtt 83  Q
    ||||||||||||||||||||||||||||| ||||||    
T  22049200 gttttatgttattaacatggatgttgtgagtttgtt 22049165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 25658506 - 25658630
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| ||| |||||||||||||||| ||||||| ||  |||||| |||||| ||||| |      |||| ||| |||||||   ||||| | |||    
T  25658506 cgttttatgctatcaacatggatgttgtgagtttgttcacaaattcattatttttgtttttagc------gaatttgtattgtatcaatgtattttgtca 25658599  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||| ||||||||||||    
T  25658600 atttgaatgaatgaatattgtttatttttgt 25658630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 31891106 - 31891063
Alignment:
Q  136 gtattctatcaacttgaatgaattaatatcgtttatttttgtaa 179  Q
    |||||||||||| |||||||||| |||||| |||||||||||||    
T  31891106 gtattctatcaatttgaatgaataaatatcatttatttttgtaa 31891063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 52555528 - 52555469
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||| |||||||||||||||||||| | ||||| ||| ||||| ||||||| |||||    
T  52555528 ttttatgctattaacatggatgttgtgagtctgttcacagattcatcctttttgttttta 52555469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 53647945 - 53648089
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgt-gttgtatcggcgtattctatc 145  Q
    ||||| ||| |||||||||||||||| ||| ||||||| ||  ||||| ||||||| ||||| | | |||| || |||  ||||||||  ||| ||||||    
T  53647945 cgtttaatgctattaacatggatgttatgagtttgttcacatattcatcctttttgtttttagcgaatttggatttgtaattgtatcgatgtactctatc 53648044  T
Q  146 aacttgaatgaatta----atatcgtttatttttgtaaaacaaat 186  Q
    || |||||||||| |    |||||||||||||| |||||| ||||    
T  53648045 aatttgaatgaatgaatatatatcgtttattttagtaaaaaaaat 53648089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 26674703 - 26674749
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcat 94  Q
    |||||||| |||||||||||||||||||| ||||||| ||| |||||    
T  26674703 gttttatgctattaacatggatgttgtgagtttgttcacagattcat 26674749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 18936068 - 18936109
Alignment:
Q  136 gtattctatcaacttgaatgaattaatatcgtttatttttgt 177  Q
    |||||||||||| |||||||||| |||||| |||||||||||    
T  18936068 gtattctatcaatttgaatgaatgaatatcttttatttttgt 18936109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 42914795 - 42914840
Alignment:
Q  136 gtattctatcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||||||||||| ||||| |||| |||||||||||||||| |||||    
T  42914795 gtattctatcaatttgaaagaataaatatcgtttatttttataaaa 42914840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 44374978 - 44374937
Alignment:
Q  140 tctatcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||||||| |||||||||| |||||| |||||||||||||||    
T  44374978 tctatcaatttgaatgaatgaatatcatttatttttgtaaaa 44374937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 84
Target Start/End: Original strand, 51152454 - 51152491
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttc 84  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  51152454 cgttttatgctattaacatggatgttgtgagtttgttc 51152491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 5388837 - 5388889
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttt 99  Q
    ||||||||| ||||| |||||||||||||| ||||||| ||| ||||| ||||    
T  5388837 cgttttatgctattagcatggatgttgtgagtttgttcacagattcatccttt 5388889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 15182795 - 15182871
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaat 120  Q
    ||||||| |||| |||||| || |||||||||| ||||||||||| ||||| | ||||  ||||| | |||||||||    
T  15182795 tgtcgttgtatgctattaatatagatgttgtgagtttgttcgcagattcatccattttatttttagcgactttgaat 15182871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 16992197 - 16992257
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||||||| ||||||||||||||||||||  |||||| ||  ||||| ||||||| |||||    
T  16992197 gttttatgctattaacatggatgttgtgaggttgttcacatattcatcctttttgttttta 16992257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 181
Target Start/End: Original strand, 19745779 - 19745863
Alignment:
Q  97 tttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||||| ||||||| | |||| || ||| ||||||||   || |||||||| || ||||| | ||||||||||||||||||||||    
T  19745779 tttttgtttttaacgaatttggatttgtattgtatcgatatactctatcaatttaaatgattgaatatcgtttatttttgtaaaa 19745863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 181
Target Start/End: Complemental strand, 19794027 - 19793943
Alignment:
Q  97 tttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||||| ||||||| | |||| || ||| ||||||||   || |||||||| || ||||| | ||||||||||||||||||||||    
T  19794027 tttttgtttttaacgaatttggatttgtattgtatcgatatactctatcaatttaaatgattgaatatcgtttatttttgtaaaa 19793943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 43853643 - 43853679
Alignment:
Q  52 tatgttattaacatggatgttgtgaatttgttcgcag 88  Q
    |||||||||||| |||||||||||| |||||||||||    
T  43853643 tatgttattaacttggatgttgtgagtttgttcgcag 43853679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 108
Target Start/End: Complemental strand, 54420529 - 54420469
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||||||| ||||||||||||||||||||   ||||| ||| ||||| ||||||| |||||    
T  54420529 gttttatgctattaacatggatgttgtgagcctgttcacagattcatcctttttgttttta 54420469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 56335860 - 56335900
Alignment:
Q  141 ctatcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    ||||||| |||||||||| |||||||||||| |||||||||    
T  56335860 ctatcaatttgaatgaatgaatatcgtttatatttgtaaaa 56335900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 95)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 44 - 181
Target Start/End: Original strand, 29543129 - 29543266
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| |||||||| ||||||||| | ||||||| ||  ||| ||||||||| ||||| ||| ||||||| ||| ||||||||  ||| ||||    
T  29543129 tgtcgttttatgctattaacacggatgttgttagtttgttcacaaattctttctttttgtttttagcaaatttgaatttgtattgtatcgatgtactcta 29543228  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  29543229 tcaatttgaatgaatgaatatcgtttatttttgtaaaa 29543266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 20560915 - 20560781
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||  |||||||||||||||||||| ||||||| ||| ||||| ||||||| ||||| | | |||| || ||| ||||||||  ||| |||||||    
T  20560915 cgttttatactattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatca 20560816  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | |||||||||| ||||||||||||||||||||||    
T  20560815 atttgaatgaatgaatatcgtttatttttgtaaaa 20560781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 181
Target Start/End: Original strand, 35333844 - 35333978
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||| |||||  |||||| ||||||| | |||| || ||| ||||||||  ||| |||||||    
T  35333844 cgttttatgctattaacatggatgatgtgagtttgttcacagattcatcttttttgtttttaacgaatttggatttgtattgtatcgatgtactctatca 35333943  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | |||||||||| ||||||||||||||||||||||    
T  35333944 atttgaatgaatgaatatcgtttatttttgtaaaa 35333978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 12890899 - 12890769
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||| ||||| | | |||| || ||| ||||||||  ||| |||||||    
T  12890899 cgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatca 12890800  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||| ||| ||||||||||||||||||    
T  12890799 atttgaattaatgaatatcgtttatttttgt 12890769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 33012387 - 33012517
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||| ||  ||||| ||||||| ||||| | | ||| ||| ||| ||||||||  ||| |||||||    
T  33012387 cgttttatgctattaacatggatgttgtgagtttgttcacaaattcatcctttttgtttttagcgaatttaaatttgtattgtatcgatgtactctatca 33012486  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  33012487 atttgaatgaatgaatatcgtttatttttgt 33012517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 4739669 - 4739798
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    |||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||| ||||| | | |||| || ||| ||||||||  ||| ||||||||    
T  4739669 gttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaa 4739768  T
Q  148 cttgaatgaattaatatcgtttatttttgt 177  Q
     |||||||||| ||||||||||| ||||||    
T  4739769 tttgaatgaatgaatatcgtttacttttgt 4739798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 177
Target Start/End: Complemental strand, 11798322 - 11798190
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| |||||||||||||||||||| ||||||||||| |||| |||||||  ||||| | ||||||||| ||  ||||||||  ||| ||||    
T  11798322 tgtcgttttatgctattaacatggatgttgtgagtttgttcgcagattca-tctttttatttttagcgactttgaatttgaattgtatcgatgtactcta 11798224  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgt 177  Q
    |||| || ||||||| ||||||||||||| ||||    
T  11798223 tcaatttaaatgaatgaatatcgtttattgttgt 11798190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 174
Target Start/End: Original strand, 5754621 - 5754748
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||  ||||| ||||||| ||||| | | ||||||| ||| || |||||  |||||||||||    
T  5754621 cgttttatgctattaacatggatgatgtgagtttgttcacatattcatcctttttgtttttagcgaatttgaatttgtattatatcgatgtattctatca 5754720  T
Q  147 acttgaatgaattaatatcgtttatttt 174  Q
    | |||||||||| |||||||||||||||    
T  5754721 atttgaatgaatgaatatcgtttatttt 5754748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 13878791 - 13878661
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||| ||||| ||||||| ||||| | | |||  || ||| ||||||||  ||| |||||||    
T  13878791 cgttttatggtattaacatggatgatgtgagtttgttcacagattcatcctttttgtttttagcgaattttgatttgtattgtatcgatgtactctatca 13878692  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  13878691 atttgaatgaatgaatatcgtttatttttgt 13878661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 14018916 - 14018786
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||| ||||| ||||||| ||||| | | |||  || ||| ||||||||  ||| |||||||    
T  14018916 cgttttatggtattaacatggatgatgtgagtttgttcacagattcatcctttttgtttttagcgaattttgatttgtattgtatcgatgtactctatca 14018817  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  14018816 atttgaatgaatgaatatcgtttatttttgt 14018786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 27096028 - 27096158
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||| |||||   | ||||||| ||| |||||||   ||| || ||||    
T  27096028 cgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagtgaatttgaatttgtattgtatctatgtactccatca 27096127  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  27096128 atttgaatgaatgaatatcgtttatttttgt 27096158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 4732352 - 4732535
Alignment:
Q  1 attccggagacttgaataatatagtcatatttgtagg-atacact----gtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcatt 95  Q
    ||||||||||||||||||   |||||||||||||||| ||| | |    || |||||||| |||||||||||||||||||| ||||||| ||| |||||     
T  4732352 attccggagacttgaata---tagtcatatttgtaggcataaattttttgttgttttatgctattaacatggatgttgtgagtttgttcacagattcatc 4732448  T
Q  96 ctttttggttttaac-aactttgaatatgtgttgtatcggcgtattctatcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    ||||||| ||||| | || |||| || ||| |||||| |  ||| |||||||| |||||| ||| ||||||||||||| ||||||||    
T  4732449 ctttttgtttttagcgaattttggatttgtattgtattgatgtactctatcaatttgaattaatgaatatcgtttattattgtaaaa 4732535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 47 - 174
Target Start/End: Original strand, 44942625 - 44942752
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||| || || | | |||  || ||| ||||||||  ||| |||||||    
T  44942625 cgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttatagcgaatttagatttgtattgtatcgatgtactctatca 44942724  T
Q  147 acttgaatgaattaatatcgtttatttt 174  Q
    | |||||||||| |||||||||||||||    
T  44942725 atttgaatgaatgaatatcgtttatttt 44942752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 181
Target Start/End: Original strand, 12705025 - 12705159
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||| ||||||||||| ||||||| ||| |||||  |||||| ||||| | | |||| || ||| ||||||||  ||| |||||||    
T  12705025 cgttttatgctattaacacggatgttgtgagtttgttcacagattcatcatttttgtttttagcgaatttggatttgtattgtatcgatgtactctatca 12705124  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | |||||||||| |||||| ||||||||| |||||    
T  12705125 atttgaatgaatgaatatcctttatttttataaaa 12705159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 18089196 - 18089055
Alignment:
Q  47 cgttttatgttattaacatg--gatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctat 144  Q
    ||||||||| |||||| |||  |||||||||| ||||||| ||| ||||| ||||||| ||||| | | |||| || ||| ||||||||  ||| | |||    
T  18089196 cgttttatgctattaatatgtggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactatat 18089097  T
Q  145 caacttgaatgaattaatatcgtttatttttgtaaaacaaat 186  Q
    ||| |||||||||| |||||||||||||||||||||| ||||    
T  18089096 caatttgaatgaatgaatatcgtttatttttgtaaaaaaaat 18089055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 25068180 - 25068310
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| ||||||||  |||| ||||| ||||||| ||| ||||| ||||||| ||||| | | |||| || ||| ||||||||  ||| |||||||    
T  25068180 cgttttatgctattaacactgatgatgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatca 25068279  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  25068280 atttgaatgaatgaatatcgtttatttttgt 25068310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 181
Target Start/End: Complemental strand, 28261690 - 28261553
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||| ||||||||||||| |||||||||||||| ||||||| ||  || || ||||||| ||||| | | |||| || ||| ||||||||  ||| ||||    
T  28261690 tgtcattttatgttattaccatggatgttgtgagtttgttcacaaatttatcctttttgtttttatcgaatttggatttgtattgtatcgatgtactcta 28261591  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||| |||||||||| ||||| ||||||||||| ||||    
T  28261590 tcaatttgaatgaatgaatattgtttatttttgcaaaa 28261553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 9978460 - 9978330
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||  ||||||||||| | ||||| | | |||| || ||| ||||||||   || |||||||    
T  9978460 cgttttatgatattaacatggatgatgtgagtttgttcacatattcattcttttcgtttttagcgaatttggatgtgtattgtatcgatatactctatca 9978361  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||| ||||||||||||    
T  9978360 atttgaatgaatgaatatagtttatttttgt 9978330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 11937648 - 11937518
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| || |||| ||| ||||| ||||||| ||||| | |  |||||| ||| ||||||||  ||| |||||||    
T  11937648 cgttttatgctattaacatggatgttgtgagttagttcacagattcatcctttttgtttttagcgaaattgaatttgtattgtatcgatgtactctatca 11937549  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | ||| || ||| |||||| |||||||||||    
T  11937548 atttggataaatgaatatcatttatttttgt 11937518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 16136417 - 16136547
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||  ||||| ||||||| ||| ||||| ||||||| ||||| | | |||  || ||| || |||||  ||| |||||||    
T  16136417 cgttttatgctattaacatggataatgtgagtttgttcacagattcatcctttttgtttttagcgaatttagatttgtattatatcgatgtactctatca 16136516  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  16136517 atttgaatgaatgaatatcgtttatttttgt 16136547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 186
Target Start/End: Original strand, 20570294 - 20570436
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| ||||||||| |||| ||||| ||||||||||  |||||  |||||| ||||| | | ||||||| ||  |||||||   ||||| ||    
T  20570294 tgtcgttttatgctattaacatagatgctgtgagtttgttcgcatattcatcatttttgtttttagcgattttgaatttgaattgtatcaatgtatttta 20570393  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgtaaaacaaat 186  Q
    ||||||| |||| || ||||||||||||| |||||||| ||||    
T  20570394 tcaacttaaatggatgaatatcgtttattgttgtaaaaaaaat 20570436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 38384248 - 38384118
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||| | |||||||||||||| | ||| ||||||| || |||||| ||||||| ||||| | | ||||||| ||| ||||||||  ||  | |||||    
T  38384248 cgttttaggctattaacatggatgctctgagtttgttcacacgttcatcctttttgtttttagcgaatttgaatttgtattgtatcgatgtgctttatca 38384149  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  38384148 atttgaatgaatgaatatcgtttatttttgt 38384118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 49 - 179
Target Start/End: Complemental strand, 40039103 - 40038973
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaac 148  Q
    ||||||| |||||||||||| ||||||| |||||||| || |||||  |||||| ||||||  ||||||||| | | ||||||||  ||| | ||||||     
T  40039103 ttttatgctattaacatggacgttgtgagtttgttcgtagattcatcatttttgtttttaatgactttgaatttttattgtatcgatgtactttatcaat 40039004  T
Q  149 ttgaatgaattaatatcgtttatttttgtaa 179  Q
     |||||||||  |||||||||||||||||||    
T  40039003 atgaatgaatggatatcgtttatttttgtaa 40038973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 49 - 185
Target Start/End: Original strand, 11942709 - 11942846
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaac 148  Q
    ||||||| ||||||||||| |||||||| ||| ||| ||| ||||| ||||||| ||||  | | ||||||| ||| || ||||| |||| |||||| |     
T  11942709 ttttatgctattaacatgggtgttgtgagtttattcacagattcatcctttttgttttttgcgaatttgaatttgtattatatcgacgtactctatcgat 11942808  T
Q  149 ttgaatgaattaatatcgtttatttttgt-aaaacaaa 185  Q
    |||||||||| ||||||||||| |||||| ||||||||    
T  11942809 ttgaatgaatgaatatcgtttacttttgtcaaaacaaa 11942846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 31908599 - 31908472
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||| ||| ||||| ||||||| ||| ||||| ||||||  ||||| ||| |||| || | | |||||| |  ||| |||||||    
T  31908599 cgttttatgctattaacatgaatgctgtgagtttgttcacagattcatcctttttatttttagcaaatttggatttctattgtattgatgtactctatca 31908500  T
Q  147 acttgaatgaattaatatcgtttatttt 174  Q
    | |||||||||| |||||||||||||||    
T  31908499 atttgaatgaatgaatatcgtttatttt 31908472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 38535086 - 38534960
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||| ||||| | | |||  || ||| |||||||   ||| |||||||    
T  38535086 cgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttagatttgtattgtatc-atgtactctatca 38534988  T
Q  147 acttgaatgaattaatatcgtttatttt 174  Q
    | |||||||||| |||||| ||||||||    
T  38534987 atttgaatgaatgaatatcatttatttt 38534960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 159
Target Start/End: Original strand, 44589208 - 44589323
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| |||||||||||||| ||||| ||||||| ||  || || ||||||| ||||| | | ||||||| ||| ||||||||   |||||||    
T  44589208 tgtcgttttatgctattaacatggatgatgtgagtttgttcacaaatttatcctttttgtttttagcgaatttgaatttgtattgtatcgatttattcta 44589307  T
Q  144 tcaacttgaatgaatt 159  Q
    |||| |||||||||||    
T  44589308 tcaatttgaatgaatt 44589323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 11931196 - 11931250
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttttt 101  Q
    ||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||    
T  11931196 cgttttatgctattaacatggatgttgtgagtttgttcgcagattcattcttttt 11931250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 34416545 - 34416415
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||| | ||||||| ||| ||| |  |||||| |||||   | |||| || ||| ||||||||  ||| |||||||    
T  34416545 cgttttatgctattaacatggatgttgtaagtttgttcacagattcgtcttttttgtttttagtgaatttggatttgtattgtatcgatgtactctatca 34416446  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | | |||||||| ||||||||||||||||||    
T  34416445 attcgaatgaatgaatatcgtttatttttgt 34416415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 36868347 - 36868477
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||| | ||| |||||  |||||| ||||| | | ||| ||| | | || |||||   || |||||||    
T  36868347 cgttttatgctattaacatggatgttgtgagtttgtacacagattcatcatttttgtttttagcgaatttaaatttatattatatcgatatactctatca 36868446  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  36868447 atttgaatgaatgaatatcgtttatttttgt 36868477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 4703471 - 4703600
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    ||||||| |||||||||||| ||||| || |||||| | |  ||||| ||||||| ||||  | ||||||||| ||| ||||||||  ||| ||| ||||    
T  4703471 gttttatattattaacatggttgttgcgagtttgtttgaaaattcatcctttttgtttttggcgactttgaatttgtattgtatcgatgtactctgtcaa 4703570  T
Q  148 cttgaatgaattaatatcgtttatttttgt 177  Q
     ||| |||||| ||||||||||||||||||    
T  4703571 tttggatgaatgaatatcgtttatttttgt 4703600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 177
Target Start/End: Complemental strand, 9689770 - 9689637
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| |||||||||||||| | ||| ||||||| ||  ||||| ||||||  ||||| | | ||||||| ||| || |||||  ||| ||||    
T  9689770 tgtcgttttatgctattaacatggatgctatgagtttgttcacatattcatcctttttatttttagcgaatttgaatttgtattatatcgatgtactcta 9689671  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgt 177  Q
    |||| || |||||||  |||||||||||||||||    
T  9689670 tcaatttaaatgaatgtatatcgtttatttttgt 9689637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 11561472 - 11561396
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaat 120  Q
    ||||||||| || |||||||||||||||||| | ||||||||||| ||||| ||||||  ||||| |||||||||||    
T  11561472 tgtcgttttctgctattaacatggatgttgtaagtttgttcgcagattcatcctttttatttttagcaactttgaat 11561396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 5071160 - 5071105
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttg 102  Q
    ||||||||| |||||||||||||||||||| ||||||||||| ||||| |||||||    
T  5071160 cgttttatgctattaacatggatgttgtgagtttgttcgcagattcatcctttttg 5071105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 177
Target Start/End: Original strand, 13113361 - 13113480
Alignment:
Q  58 attaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatgaa 157  Q
    |||||||||||||||||||| |||||| ||  ||||| |||   | || |||| ||||||||| | | || |||||  |||||||||||| || ||||||    
T  13113361 attaacatggatgttgtgaacttgttcacatattcatccttcacgtttataacgactttgaatttatattatatcgatgtattctatcaatttaaatgaa 13113460  T
Q  158 ttaatatcgtttatttttgt 177  Q
    | ||||||||||||||||||    
T  13113461 taaatatcgtttatttttgt 13113480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 181
Target Start/End: Original strand, 106576 - 106714
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgc-aggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattct 142  Q
    |||||||| ||| |||||||||||||| ||||| ||||||| | || |||||  |||||| ||||| | | ||||||| ||| |||| |||   || |||    
T  106576 tgtcgtttcatgctattaacatggatgatgtgagtttgttcactagtttcatcatttttgtttttagcgaatttgaatttgtattgtttcgatatagtct 106675  T
Q  143 atcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    ||||| |||||||||| |||||  |||||||||||||||    
T  106676 atcaatttgaatgaatgaatattatttatttttgtaaaa 106714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 17267908 - 17267778
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| ||||||| || ||||||||| |||||||  || ||||| ||||||| |||||   | |||| || ||| |||||||   ||| |||||||    
T  17267908 cgttttatgctattaacgtgtatgttgtgagtttgttcatagattcatcctttttgtttttagtgaatttggatttgtattgtatcaatgtactctatca 17267809  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||| ||| ||||||||||||||||||    
T  17267808 atttgaataaatgaatatcgtttatttttgt 17267778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 171
Target Start/End: Original strand, 17792799 - 17792920
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaac 148  Q
    ||||||| ||||||||| |||||||||  ||||||||||  ||||| |||||  | |||||| ||||||||| ||| ||||||||  ||| | ||||||     
T  17792799 ttttatgctattaacatagatgttgtgtttttgttcgcaaattcat-cttttatgctttaacgactttgaatttgtattgtatcgatgtactttatcaat 17792897  T
Q  149 ttgaatgaattaatatcgtttat 171  Q
    |||||| ||| ||||||||||||    
T  17792898 ttgaattaatgaatatcgtttat 17792920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 158
Target Start/End: Complemental strand, 33839178 - 33839068
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    |||||||| |||||||||||||||||||| ||| ||||||  |||||| |||||| ||| ||| ||||  ||| | | ||||||||  || || ||||||    
T  33839178 gttttatgctattaacatggatgttgtgagttttttcgcaaattcattatttttgttttcaacgacttcaaatttatattgtatcgatgttttatatcaa 33839079  T
Q  148 cttgaatgaat 158  Q
    |||||||||||    
T  33839078 cttgaatgaat 33839068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 43473927 - 43473797
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||| ||||| ||||||| ||||| | | |||| || | | || ||||   ||||| ||||     
T  43473927 cgttttatgctattaacatggatgctgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttatattatatcaatgtattatatcg 43473828  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||| ||||||    
T  43473827 atttgaatgaatgaatatcgtttacttttgt 43473797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 43696207 - 43696337
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||||| |||||||   | |||||  |||||| ||||| | | |||  || ||| |||||| |  ||| |||||||    
T  43696207 cgttttatgatattaacatggatgatgtgagtttgttcatcgattcatcatttttgtttttagcgaatttagatttgtattgtattgatgtactctatca 43696306  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  43696307 atttgaatgaatgaatatcgtttatttttgt 43696337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 25622834 - 25622773
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||||| |||||||||||||||||||| ||||||||||  ||||| ||||||| |||||    
T  25622834 cgttttatgctattaacatggatgttgtgagtttgttcgcatattcatcctttttgttttta 25622773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 181
Target Start/End: Complemental strand, 28230878 - 28230745
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    |||||||  |||||||||||| | ||||| ||||||    | ||||| ||||||| ||||| | | ||||||| ||| ||||||||  ||| |||| |||    
T  28230878 gttttatactattaacatggaggctgtgagtttgtttagtgattcatcctttttgtttttagcgaatttgaatttgtattgtatcgatgtactctaacaa 28230779  T
Q  148 cttgaatgaattaatatcgtttatttttgtaaaa 181  Q
     |||||||||  ||||||||||||||||||||||    
T  28230778 tttgaatgaacgaatatcgtttatttttgtaaaa 28230745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 181
Target Start/End: Original strand, 32015593 - 32015726
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    |||||||| |||||||||||||||| | | ||||||| ||  ||||   |||||| ||||| | | |||| || ||| || |||||  ||| ||||||||    
T  32015593 gttttatgctattaacatggatgttttaagtttgttcacatattcaacatttttgcttttagcgaatttggatttgtattatatcgatgtactctatcaa 32015692  T
Q  148 cttgaatgaattaatatcgtttatttttgtaaaa 181  Q
     |||||||||| |||||||||||| |||||||||    
T  32015693 tttgaatgaatgaatatcgtttatctttgtaaaa 32015726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 41797934 - 41798019
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatc 132  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||| ||||| ||||||| ||||| ||| ||| ||| ||| |||||||    
T  41797934 cgttttatgctattaacatggatgatgtgagtttgttcacagattcatcctttttgtttttagcaaatttaaatttgtattgtatc 41798019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 178
Target Start/End: Complemental strand, 13548702 - 13548570
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaa-caactttgaatatgtgttgtatcggcgtattctatc 145  Q
    ||||||||| |||||||||||||  | ||| |||||||| || ||||| |||||| ||||| | ||| ||| |||  || ||||||||  ||| | ||||    
T  13548702 cgttttatgctattaacatggatactctgagtttgttcgtagattcatccttttttgtttttagcaattttaaattcgtattgtatcgatgtactatatc 13548603  T
Q  146 aacttgaatgaattaatatcgtttatttttgta 178  Q
    || || ||||||| |||||||||||||||||||    
T  13548602 aatttaaatgaatgaatatcgtttatttttgta 13548570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 35353965 - 35354025
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||||||| |||||||||||||||||||| ||||||| || |||||| ||||||| |||||    
T  35353965 gttttatgctattaacatggatgttgtgagtttgttcacatgttcatcctttttgttttta 35354025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 10286793 - 10286670
Alignment:
Q  50 tttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaact 149  Q
    |||||| ||||||||||||| || ||| ||||||| ||  |||||  |||||| ||||| ||| |||| || | | |||||| |  ||| |||||||| |    
T  10286793 tttatgctattaacatggatattttgagtttgttcacaaattcatcatttttgtttttagcaaatttggatttctattgtattgatgtactctatcaatt 10286694  T
Q  150 tgaatgaattaatatcgtttattt 173  Q
    ||||||||| ||||||||||||||    
T  10286693 tgaatgaataaatatcgtttattt 10286670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 15920198 - 15920322
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| ||||||||| ||||||| || ||||||| ||| |||||  |||||| |||||       ||||| ||| ||||||||  ||| |||||||    
T  15920198 cgttttatgctattaacattgatgttgcgagtttgttcacagattcatcttttttgtttttag------tgaatttgtattgtatcgatgtactctatca 15920291  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| |||||| |||||||||||    
T  15920292 atttgaatgaatgaatatcatttatttttgt 15920322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 13740436 - 13740302
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||  |||||||||||||| ||||| ||||||| ||   |||| ||||||| ||||| | | |||| || ||| |||||| |  ||| | |||||    
T  13740436 cgttttatagtattaacatggatgctgtgagtttgttcacaaactcatcctttttgtttttagcgaatttggatttgtattgtattgatgtactttatca 13740337  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | |||||||||  |||||||||| |||||||||||    
T  13740336 atttgaatgaaagaatatcgtttgtttttgtaaaa 13740302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 27665875 - 27666005
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcagg-ttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    |||||||  ||||||||| |||||||||| ||||||||||   |||||  |||||| ||||| ||| ||| ||| ||| ||||||    |||||||||||    
T  27665875 gttttatactattaacatagatgttgtgagtttgttcgcaatattcatcatttttgtttttagcaattttaaatttgtattgtataaatgtattctatca 27665974  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | | |||||||| ||||| ||||||||||||    
T  27665975 attagaatgaatgaatattgtttatttttgt 27666005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 34471299 - 34471434
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||| ||  |||||  |||||| ||||| | |    | || ||| ||||||||  ||| || ||||    
T  34471299 cgttttatgctattaacatggatgttgtgagtttgttcacatattcatcatttttgtttttagcga----ggatttgtattgtatcgatgtactccatca 34471394  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaacaaat 186  Q
    | ||||||||||  ||||||||||||||||| ||| ||||    
T  34471395 atttgaatgaatgtatatcgtttatttttgtcaaaaaaat 34471434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 102
Target Start/End: Original strand, 34480286 - 34480344
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttg 102  Q
    |||||||||||  |||||||||||||||||||| ||||||||||  ||||| |||||||    
T  34480286 tgtcgttttattctattaacatggatgttgtgagtttgttcgcatattcatcctttttg 34480344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 34962777 - 34962643
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||| | ||||||| ||  ||||| || |||| ||||| | | |||| || ||| ||||||    ||| |||||||    
T  34962777 cgttttatgctattaacatggatgctgtaagtttgttcacacattcatcctgtttgtttttagcgaatttggatttgtattgtatttatgtactctatca 34962678  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | |||||||||| |||||| ||||||||| |||||    
T  34962677 atttgaatgaatgaatatcatttatttttataaaa 34962643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 109
Target Start/End: Complemental strand, 3397772 - 3397707
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaa 109  Q
    |||||||||||| ||||||||||| |||||||| ||||||| ||  ||||| ||||||| ||||||    
T  3397772 tgtcgttttatgctattaacatggttgttgtgagtttgttcacaaattcatcctttttgtttttaa 3397707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 4878526 - 4878465
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||||||||||||||||||||||| ||||| ||||||| ||  ||||| ||||||| |||||    
T  4878526 cgttttatgttattaacatggatgctgtgagtttgttcacatattcatcctttttgttttta 4878465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 7640146 - 7640085
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||||| ||||||||||||||||||||   ||||| ||| ||||||||||||| |||||    
T  7640146 cgttttatgctattaacatggatgttgtgagcctgttcacagattcattctttttgttttta 7640085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 84
Target Start/End: Complemental strand, 25237121 - 25237084
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttc 84  Q
    |||||||||||||||||||||||||||||| |||||||    
T  25237121 cgttttatgttattaacatggatgttgtgagtttgttc 25237084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 36508253 - 36508314
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||||| |||||||||||||||||||||  ||||| ||| ||||| ||||||| |||||    
T  36508253 cgttttatgctattaacatggatgttgtgaacctgttcacagattcatcctttttgctttta 36508314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 9715337 - 9715273
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||| |||||||||||||  |||||||||| |||||||| || ||||| ||||||| |||||    
T  9715337 tgtcgttatatgttattaacaaagatgttgtgagtttgttcgtagattcatcctttttgttttta 9715273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 14825895 - 14825939
Alignment:
Q  57 tattaacatggatgttgtgaatttgttcgcaggttcattcttttt 101  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||    
T  14825895 tattaacatggatgttgtgaatttgttcgcaaattcatccttttt 14825939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 108
Target Start/End: Complemental strand, 19580791 - 19580731
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||||||| |||||||||||||||||||| ||||||| ||| ||||  ||||||| |||||    
T  19580791 gttttatgctattaacatggatgttgtgagtttgttcacagattcaaactttttgttttta 19580731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 22597474 - 22597534
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttt 107  Q
    ||||||||| |||||||||||||||| ||| ||||||| ||| ||||| |||||| |||||    
T  22597474 cgttttatgctattaacatggatgttatgagtttgttcacagattcatccttttttgtttt 22597534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 3527404 - 3527455
Alignment:
Q  126 ttgtatcggcgtattctatcaacttgaatgaattaatatcgtttatttttgt 177  Q
    ||||||||  ||| |||||||| |||||||||| ||||||||||||||||||    
T  3527404 ttgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 3527455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 99
Target Start/End: Original strand, 4228307 - 4228362
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttt 99  Q
    ||||||| |||| ||||||| |||||||||||| ||||||||||| ||||| ||||    
T  4228307 tgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccttt 4228362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 131
Target Start/End: Original strand, 4615260 - 4615347
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtat 131  Q
    |||| |||||||||||||| ||  || ||||||||||||||| || |||||| |||||| |||| |  ||||||||| ||| ||||||    
T  4615260 tgtcattttatgttattaatataaatattgtgaatttgttcgtagattcattttttttgtttttgatgactttgaatttgtattgtat 4615347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 7072790 - 7072719
Alignment:
Q  18 aatatagtcatatttgtagg-----atacactgtcgttttatgttattaacatggatgttgtgaatttgttc 84  Q
    ||||||||||||||||||||     ||||  || ||||||||| |||||||||||||||||||| |||||||    
T  7072790 aatatagtcatatttgtaggcatatatactttgccgttttatgctattaacatggatgttgtgagtttgttc 7072719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 99
Target Start/End: Complemental strand, 9986239 - 9986184
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttt 99  Q
    ||||||| |||| ||||||| |||||||||||| ||||||||||| ||||| ||||    
T  9986239 tgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccttt 9986184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 99
Target Start/End: Original strand, 17319504 - 17319559
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttt 99  Q
    ||||||| |||||||||||| ||||||| |||| ||||||||||| ||||| ||||    
T  17319504 tgtcgttatatgttattaacttggatgtcgtgagtttgttcgcagattcatccttt 17319559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 26491698 - 26491749
Alignment:
Q  126 ttgtatcggcgtattctatcaacttgaatgaattaatatcgtttatttttgt 177  Q
    ||||||||  |||||||||||| |||||||||| |||||||||| |||||||    
T  26491698 ttgtatcgatgtattctatcaatttgaatgaatgaatatcgtttgtttttgt 26491749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 83
Target Start/End: Complemental strand, 31262746 - 31262707
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgtt 83  Q
    |||||||| |||||||||||||||||||||| ||||||||    
T  31262746 tgtcgtttaatgttattaacatggatgttgtaaatttgtt 31262707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 32314764 - 32314894
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaac-aactttgaatatgtgttgtatcggcgtattctatc 145  Q
    ||||||||| |||||||||||||||| ||| ||||||| ||  ||||| ||||||| ||| ||| || || || | ||| ||||||||  ||| | ||||    
T  32314764 cgttttatgctattaacatggatgttttgagtttgttcaca-attcatcctttttgttttaaacgaatttggattttgtattgtatcgatgtactttatc 32314862  T
Q  146 aacttgaatgaattaatatcgtttatttttgt 177  Q
    || |||||||||| ||||||  ||||||||||    
T  32314863 aatttgaatgaatgaatatctattatttttgt 32314894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 110
Target Start/End: Original strand, 41177182 - 41177245
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaac 110  Q
    ||||||||| ||||||||||||||||||||   ||||| ||| ||||| ||||||| |||||||    
T  41177182 cgttttatgctattaacatggatgttgtgagcctgttcacagattcatcctttttgtttttaac 41177245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 77
Target Start/End: Complemental strand, 2278822 - 2278792
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaa 77  Q
    |||||||||||||||||||||||||||||||    
T  2278822 cgttttatgttattaacatggatgttgtgaa 2278792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 6174009 - 6174055
Alignment:
Q  53 atgttattaacatggatgttgtgaatttgttcgcaggttcattcttt 99  Q
    ||||||||||| |||||||||||| ||||||||||| ||||| ||||    
T  6174009 atgttattaacttggatgttgtgagtttgttcgcagattcatccttt 6174055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 94
Target Start/End: Complemental strand, 17118607 - 17118557
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcat 94  Q
    |||||||||||| |||||||||| ||||||||| |||||||| || |||||    
T  17118607 tgtcgttttatgctattaacatgaatgttgtgagtttgttcgtagattcat 17118557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 24461704 - 24461750
Alignment:
Q  136 gtattctatcaacttgaatgaattaatatcg-tttatttttgtaaaa 181  Q
    |||||||||||| |||||||||| ||||||| |||||||||||||||    
T  24461704 gtattctatcaatttgaatgaatgaatatcgttttatttttgtaaaa 24461750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 3465250 - 3465307
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttttt 101  Q
    |||||||||||| ||||||||||||||||||||  |||||| ||| || || ||||||    
T  3465250 tgtcgttttatgctattaacatggatgttgtgagcttgttcacagatttatccttttt 3465307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 3603309 - 3603370
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||||| ||||||||||||||||||||   ||||| ||| ||||| ||||||| |||||    
T  3603309 cgttttatgctattaacatggatgttgtgagcctgttcacagattcatcctttttgttttta 3603370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 15673758 - 15673698
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||||| |||||||||||||||||||| ||||||  ||| ||||| ||||||| |||||    
T  15673758 cgttttatgctattaacatggatgttgtgagtttgtt-tcagattcatcctttttgttttta 15673698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 17767356 - 17767315
Alignment:
Q  51 ttatgttattaacatggatgttgtgaatttgttcgcaggttc 92  Q
    ||||| |||||||||||||||||||| |||||||||| ||||    
T  17767356 ttatgctattaacatggatgttgtgagtttgttcgcatgttc 17767315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 84
Target Start/End: Original strand, 30933572 - 30933609
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttc 84  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  30933572 cgttttatgctattaacatggatgttgtgagtttgttc 30933609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 181
Target Start/End: Complemental strand, 32712004 - 32711875
Alignment:
Q  52 tatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttg 151  Q
    |||||||||||||  ||||||||||||||||| |||  ||||| |  |||| ||||||| ||||||||| | | ||| ||  |  || ||||| || |      
T  32712004 tatgttattaacactgatgttgtgaatttgtttgcaaattcatccactttgtttttaacgactttgaatttatattgcattagtatactctattaattaa 32711905  T
Q  152 aatgaattaatatcgtttatttttgtaaaa 181  Q
    ||||||| |||||||||||||||| |||||    
T  32711904 aatgaatgaatatcgtttatttttataaaa 32711875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 37883977 - 37884038
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||| |||||  |||||| |||||    
T  37883977 cgttttatgctattaacatggatgatgtgagtttgttcacagattcatcatttttgttttta 37884038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 110
Target Start/End: Original strand, 40125719 - 40125772
Alignment:
Q  57 tattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaac 110  Q
    |||||||||||||| ||||| ||||||| ||  ||||||||||||| |||||||    
T  40125719 tattaacatggatgatgtgagtttgttcacatattcattctttttgtttttaac 40125772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 40125796 - 40125837
Alignment:
Q  140 tctatcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||||||| |||||||||| |||||| |||||||||||||||    
T  40125796 tctatcaatttgaatgaatgaatatcatttatttttgtaaaa 40125837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 43929090 - 43929029
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||||| |||||||||||||||||||| | ||||| ||  ||||| ||||||| |||||    
T  43929090 cgttttatgctattaacatggatgttgtgagtctgttcacaaattcatcctttttgttttta 43929029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 8809461 - 8809505
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcag 88  Q
    ||||||| |||| ||||||| |||||||||||| |||||||||||    
T  8809461 tgtcgttgtatgctattaacttggatgttgtgagtttgttcgcag 8809505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 10589419 - 10589478
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttt 107  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||| |||| ||||||| |||||    
T  10589419 cgttttatgctattaacatggatgatgtgagtttgttcacagattca-tctttttcgtttt 10589478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 13268897 - 13268957
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||||||| |||||||||||||||| ||| |||||||| || |||||  |||||| |||||    
T  13268897 gttttatgatattaacatggatgttatgagtttgttcgtagattcatcatttttgttttta 13268957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 80
Target Start/End: Complemental strand, 19382240 - 19382204
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaattt 80  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  19382240 tgtcgttttatgctattaacatggatgtggtgaattt 19382204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 23256420 - 23256384
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgtt 83  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  23256420 cgttttatgatattaacatggatgttgtgagtttgtt 23256384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 27249045 - 27248993
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttt 99  Q
    |||| |||| ||||||| |||||||||||| ||||||||||| ||||| ||||    
T  27249045 cgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccttt 27248993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 30420856 - 30420908
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttt 99  Q
    |||| |||| ||||||| |||||||||||| ||||||||||| ||||| ||||    
T  30420856 cgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccttt 30420908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 40659826 - 40659774
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttt 99  Q
    |||| |||| ||||||| |||||||||||| ||||||||||| ||||| ||||    
T  40659826 cgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccttt 40659774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 175
Target Start/End: Original strand, 2192417 - 2192545
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||||||||||| ||| ||||| ||||||  ||||| | | ||||||| ||| ||||||||  ||| |||||||    
T  2192417 cgttttatgctattaacatggatgttgtgaatttgttcacagattcatcctttttatttttagcgaatttgaatttgtattgtatcgatgtactctatca 2192516  T
Q  147 acttgaatgaattaatatcgtttattttt 175  Q
    | |||||||||| ||||||||||||||||    
T  2192517 atttgaatgaatgaatatcgtttattttt 2192545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 13701792 - 13701662
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| |||||||  || ||||| ||||||| ||||| | | ||||||| ||| ||||||||  ||| |||||||    
T  13701792 cgttttatgctattaacatggatgttgtgagtttgttcaaagattcatcctttttgtttttagcgaatttgaatttgtattgtatcgatgtactctatca 13701693  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  13701692 atttgaatgaatgaatatcgtttatttttgt 13701662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 48855216 - 48855346
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    |||||||||||||||||||||||||||||| ||| |||  || ||||| ||||||| ||||| | | |||| || ||| |||| |||  ||| |||||||    
T  48855216 cgttttatgttattaacatggatgttgtgagtttattcatagattcatcctttttgtttttagcgaatttggatttgtattgtttcgatgtactctatca 48855315  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||||||||||||||||||||||    
T  48855316 atttgaatgaattaatatcgtttatttttgt 48855346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 30156114 - 30155950
Alignment:
Q  18 aatatagtcatatttgtagg-----atacactgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaa 112  Q
    ||||||||||||||||||||     ||||  |||||||||||| |||||||||||||||||||| ||||||| ||  ||| | ||||||| ||||| | |    
T  30156114 aatatagtcatatttgtaggcatatatactttgtcgttttatgctattaacatggatgttgtgagtttgttcacatattcttcctttttgtttttagcga 30156015  T
Q  113 ctttgaatatgtgttgtatcggcgtattctatcaacttgaatgaattaatatcgtttatttttgt 177  Q
     |||| || ||| ||||||||  ||| |||||||| |||||||||| | ||||||||||||||||    
T  30156014 atttggatttgtattgtatcgatgtactctatcaatttgaatgaatgagtatcgtttatttttgt 30155950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 24483486 - 24483356
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||| |||||| || ||||||  ||||| | | |||| || ||| || |||||  ||| |||||||    
T  24483486 cgttttatgatattaacatggatgttgtgagtttgttcacaggtttatcctttttatttttagcgaatttggatttgtattctatcgatgtactctatca 24483387  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  24483386 atttgaatgaatgaatatcgtttatttttgt 24483356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 40013062 - 40012932
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| |||| || ||| ||||| ||||||| ||||| | | |||| || ||| ||||||||   || |||||||    
T  40013062 cgttttatgctattaacatggatgttgtgagtttgatcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatatactctatca 40012963  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  40012962 atttgaatgaataaatatcgtttatttttgt 40012932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 44 - 181
Target Start/End: Original strand, 3457258 - 3457395
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| |||||||||||||||||||| ||||||||||  |||||  |||||| ||||| | | |||| || ||| |||||||   ||| ||||    
T  3457258 tgtcgttttatgctattaacatggatgttgtgagtttgttcgcaaattcatcatttttgtttttagcgaatttggatttgtattgtatcaatgtactcta 3457357  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||| || ||||||| |||||||||||||||| |||||    
T  3457358 tcaatttaaatgaatgaatatcgtttatttttataaaa 3457395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 33637735 - 33637863
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaac 148  Q
    ||||||| |||||||||||||| ||||| ||||||| ||| ||||| ||||||| ||||| | | |||| || ||| ||||||||  ||| | ||||||     
T  33637735 ttttatgctattaacatggatgatgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactttatcaat 33637834  T
Q  149 ttgaatgaattaatatcgtttatttttgt 177  Q
    |||||||||| ||||||||||||||||||    
T  33637835 ttgaatgaatgaatatcgtttatttttgt 33637863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 14585801 - 14585940
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| ||||||||||||||  |||| |||| || ||| ||||| ||||||| ||||| | | ||||||| ||| |||||| |  ||| |||||||    
T  14585801 cgttttatgctattaacatggatgccgtgagtttgctcacagattcatcctttttgtttttagcgaatttgaatttgtattgtattgatgtactctatca 14585900  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaacaaat 186  Q
    | |||||||||| |||||||||||||||||| ||| ||||    
T  14585901 atttgaatgaatgaatatcgtttatttttgtcaaaaaaat 14585940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 174
Target Start/End: Complemental strand, 32080556 - 32080426
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||| ||||||| |||||||||||||| | ||| ||||||| || |||||| ||||||| ||||| | | ||||||| ||| ||||||||  ||| ||||    
T  32080556 tgtctttttatgctattaacatggatgatatgagtttgttcacatgttcatcctttttgtttttagcgaatttgaatttgtattgtatcgatgtactcta 32080457  T
Q  144 tcaacttgaatgaattaatatcgtttatttt 174  Q
    |||| |||||||||  |||||||||||||||    
T  32080456 tcaatttgaatgaaagaatatcgtttatttt 32080426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 41868122 - 41867989
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||| ||| ||||| ||||||| ||  ||||| ||||||| ||||| | | ||||||| ||| ||||||||  ||| |||||||    
T  41868122 cgttttatgctattaacatg-atggtgtgagtttgttcacatattcatcctttttgtttttagcgaatttgaatttgtattgtatcgatgtactctatca 41868024  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | ||||||||||  |||||||||||||||||||||    
T  41868023 atttgaatgaatgcatatcgtttatttttgtaaaa 41867989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 55455201 - 55455331
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||||| ||| ||| ||| ||||| ||| ||| ||||| | | ||||||| ||| |||||||   ||| |||||||    
T  55455201 cgttttatgctattaacatggatgatgtgagtttattcacagattcatccttcttgtttttagcgaatttgaatttgtattgtatcaatgtactctatca 55455300  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  55455301 atttgaatgaatgaatatcgtttatttttgt 55455331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 105888 - 105708
Alignment:
Q  1 attccggagacttgaataatatagtcatatttgtagga-----tacactgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcatt 95  Q
    |||||||| |||| ||| |||||||||||||||||||      |||  |||||||||||| |||||||||||||| ||||| |||||||| || |||||     
T  105888 attccggaaacttcaattatatagtcatatttgtaggcataggtactttgtcgttttatgctattaacatggatgatgtgagtttgttcggagattcatc 105789  T
Q  96 ctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatgaattaatatcgtttatttttgt 177  Q
    ||||||| | |||   |||||| || ||| |||||||   ||| |||||||| |||||||||| ||||| ||||||||||||    
T  105788 ctttttgttcttagtgactttg-atttgtattgtatcaatgtactctatcaatttgaatgaatgaatattgtttatttttgt 105708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 164
Target Start/End: Original strand, 4082047 - 4082164
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||  ||| ||||| ||||||||||||| | | |||| || ||| ||||||||  ||| |||||||    
T  4082047 cgttttatgctattaacatggatgttgtgagtttgtttacagattcatcctttttggttttagcgaatttggatttgtattgtatcgatgtactctatca 4082146  T
Q  147 acttgaatgaattaatat 164  Q
    | |||||||||| |||||    
T  4082147 atttgaatgaatgaatat 4082164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 187
Target Start/End: Original strand, 31270659 - 31270788
Alignment:
Q  58 attaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatgaa 157  Q
    ||||||||||||||||||| ||||||| ||| ||||| ||||||| ||||| | | ||||||| ||| |||||| |  ||| |||||| | |||||||||    
T  31270659 attaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtattgtattgatgtactctatccatttgaatgaa 31270758  T
Q  158 ttaatatcgtttatttttgtaaaacaaatt 187  Q
    | |||||||| ||||||||| ||| |||||    
T  31270759 taaatatcgtatatttttgtcaaaaaaatt 31270788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 175
Target Start/End: Original strand, 38530263 - 38530392
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    |||||||||||||||||||||||| | ||| ||| ||| ||| ||||| ||||||| |||||| || ||||  | ||| ||||||||  ||| |||||||    
T  38530263 cgttttatgttattaacatggatgctttgagtttcttcacagattcatcctttttgtttttaaaaaatttgggtttgtattgtatcgatgtactctatca 38530362  T
Q  147 acttgaatgaatt-aatatcgtttattttt 175  Q
    | ||||||||||| ||||||||||||||||    
T  38530363 atttgaatgaattgaatatcgtttattttt 38530392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 181
Target Start/End: Complemental strand, 53155210 - 53155086
Alignment:
Q  57 tattaacatggatgttgtgaatttgttcgcaggttcattc-tttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatg 155  Q
    |||||||||||||||||||| ||||||| ||| || |||| |||||| ||||| | | ||||||| ||| ||||||||  ||| |||||||| || ||||    
T  53155210 tattaacatggatgttgtgagtttgttcacagatt-attcatttttgtttttagcgaatttgaatttgtattgtatcgatgtactctatcaatttaaatg 53155112  T
Q  156 aattaatatcgtttatttttgtaaaa 181  Q
    ||| ||||||||||||||||||||||    
T  53155111 aatgaatatcgtttatttttgtaaaa 53155086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 55090487 - 55090359
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaac 148  Q
    ||||||| |||||||||||||| || || ||||||  ||| ||||| ||||||| ||||| | | |||| || ||| ||||||||  ||| ||||||||     
T  55090487 ttttatgctattaacatggatgatgggagtttgtttacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaat 55090388  T
Q  149 ttgaatgaattaatatcgtttatttttgt 177  Q
    |||||||||| ||||||||||||||||||    
T  55090387 ttgaatgaatgaatatcgtttatttttgt 55090359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 1074684 - 1074557
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||  ||||| ||||||| ||||| | | |||| || ||| || |||||  ||| |||||||    
T  1074684 cgttttatgctattaacatggatgatgtgagtttgttcacatattcatcctttttgtttttagcgaatttggatttgtattatatcgatgtactctatca 1074585  T
Q  147 acttgaatgaattaatatcgtttatttt 174  Q
    | |||||||||| |||||||||||||||    
T  1074584 atttgaatgaatgaatatcgtttatttt 1074557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 175
Target Start/End: Original strand, 48401436 - 48401559
Alignment:
Q  52 tatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttg 151  Q
    |||| |||||||||||||| ||||| ||||||| ||| ||||| ||||||  ||||| | | ||||||| | | ||||||||  ||| |||||||| |||    
T  48401436 tatgctattaacatggatgatgtgagtttgttcacagattcatcctttttatttttagcgaatttgaatttatattgtatcgatgtactctatcaatttg 48401535  T
Q  152 aatgaattaatatcgtttattttt 175  Q
    ||||||| ||||||||||||||||    
T  48401536 aatgaatgaatatcgtttattttt 48401559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 11225668 - 11225798
Alignment:
Q  43 ctgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattct 142  Q
    ||||||| ||||| || ||||||  ||||||||| ||||||||||  ||| | ||||||| ||||||||||||| ||| | | ||||||||   |||| |    
T  11225668 ctgtcgtcttatgctactaacataaatgttgtgattttgttcgcaaattcgtcctttttgtttttaacaactttaaatttctattgtatcgatatattat 11225767  T
Q  143 atcaacttgaatgaattaatatcgtttattt 173  Q
    ||||| |||||||||| ||||||||||||||    
T  11225768 atcaatttgaatgaatgaatatcgtttattt 11225798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 174
Target Start/End: Complemental strand, 40883668 - 40883538
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| |||||||| ||||| ||||| ||||||| ||| ||||| ||||||| ||||| | | |||| || ||| |||||||   ||| ||||    
T  40883668 tgtcgttttatgctattaacacggatgatgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcaatgtactcta 40883569  T
Q  144 tcaacttgaatgaattaatatcgtttatttt 174  Q
    |||| |||||||||| ||||| |||||||||    
T  40883568 tcaatttgaatgaatgaatattgtttatttt 40883538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 11819421 - 11819553
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaa--caactttgaatatgtgttgtatcggcgtattctat 144  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||  ||||| ||||||| |||||   | | |||| || ||| ||||||||  ||| |||||    
T  11819421 cgttttatgctattaacatggatgatgtgagtttgttcacatattcatcctttttgtttttatagcgaatttggatttgtattgtatcgatgtactctat 11819520  T
Q  145 caacttgaatgaattaatatcgtttatttttgt 177  Q
    ||| |||||||||| ||||||||||||||||||    
T  11819521 caatttgaatgaatgaatatcgtttatttttgt 11819553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 177
Target Start/End: Complemental strand, 48652238 - 48652109
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    |||||||| |||||||||||||| ||||| ||||||| ||| ||||| ||||||| ||||| | | |||| |  ||| ||||||||  ||| | ||||||    
T  48652238 gttttatgctattaacatggatgatgtgagtttgttcacagattcatgctttttgtttttagcgaatttggagttgtattgtatcgatgtactttatcaa 48652139  T
Q  148 cttgaatgaattaatatcgtttatttttgt 177  Q
     |||||||||| |||||| |||||||||||    
T  48652138 tttgaatgaatgaatatcatttatttttgt 48652109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 27831420 - 27831484
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||||||||||| |||| ||||||||||||||| ||||||||||| ||||||||||||| |||||    
T  27831420 tgtcgttttatgctattgacatggatgttgtgagtttgttcgcagattcattctttttgttttta 27831484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 38379530 - 38379410
Alignment:
Q  61 aacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatgaatta 160  Q
    |||||| ||||||||| ||||||| ||  || || ||||||| ||||||||||||||||| ||| |||||||   ||| | |||||| |||||| ||| |    
T  38379530 aacatgaatgttgtgagtttgttcacaaatttatcctttttgtttttaacaactttgaatttgtattgtatcaatgtactttatcaatttgaataaataa 38379431  T
Q  161 atatcgtttatttttgtaaaa 181  Q
    ||||||||||| |||||||||    
T  38379430 atatcgtttatgtttgtaaaa 38379410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 175
Target Start/End: Complemental strand, 54706522 - 54706394
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||| ||  |||||  |||||| ||||| | | | || || ||| ||||| ||  ||| |||||||    
T  54706522 cgttttatgctattaacatggatgttgtgagtttgttcacatattcatcttttttgtttttagcgaatatggatttgtattgtaacgatgtactctatca 54706423  T
Q  147 acttgaatgaattaatatcgtttattttt 175  Q
    | |||||||||| ||||||||||||||||    
T  54706422 atttgaatgaatgaatatcgtttattttt 54706394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 31462545 - 31462410
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||  |||||||||||||||| ||| ||||||||||  |||||  |||||| ||||| | | ||| ||| ||| ||||||||  ||| | |||||    
T  31462545 cgttttattctattaacatggatgttttgagtttgttcgcatattcatcatttttgtttttagcgaatttaaatttgtattgtatcgatgtactttatca 31462446  T
Q  147 acttgaatgaattaatatcgttta-tttttgtaaaa 181  Q
    | |||||||||| ||||||||||| |||||||||||    
T  31462445 atttgaatgaatgaatatcgtttactttttgtaaaa 31462410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 49627894 - 49627760
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||||   |||||| ||  ||||| | ||||| ||||| | | |||| || | | ||||||||  ||| |||||||    
T  49627894 cgttttatgctattaacatggatgatgtgggattgttcacaaattcatccattttgtttttagcgaatttggatttatattgtatcgatgtactctatca 49627795  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | |||||||||| ||||||||||||||||||||||    
T  49627794 atttgaatgaatgaatatcgtttatttttgtaaaa 49627760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 174
Target Start/End: Complemental strand, 3961606 - 3961445
Alignment:
Q  18 aatatagtcatatttgtagg-----atacactgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaa 112  Q
    ||||||||||||||||||||     |||| |  ||||||||||||||||| ||||||||||||| |||||| |||  |||||  |||||| || ||   |    
T  3961606 aatatagtcatatttgtaggcatatatactccatcgttttatgttattaatatggatgttgtgagtttgtttgcaaattcatcatttttgtttatagtga 3961507  T
Q  113 ctttgaatatgtgttgtatcggcgtattctatcaacttgaatgaattaatatcgtttatttt 174  Q
    |||||||| ||| ||||||||   || | |||||| |||||| ||| |||||||||||||||    
T  3961506 ctttgaatttgtattgtatcgatatactttatcaatttgaataaatgaatatcgtttatttt 3961445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 55446388 - 55446517
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    |||||||| ||||||||| |||| ||||| ||||||| ||| ||||| ||||||| ||||| | | ||||||| ||  ||||||||   || ||| ||||    
T  55446388 gttttatgctattaacatagatgatgtgactttgttcacagattcatcctttttgtttttagcgaatttgaatttgcattgtatcgatatactctgtcaa 55446487  T
Q  148 cttgaatgaattaatatcgtttatttttgt 177  Q
     |||||||||| ||||||||||| ||||||    
T  55446488 tttgaatgaatgaatatcgtttacttttgt 55446517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 179
Target Start/End: Original strand, 2148079 - 2148210
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||| ||||||||||||| ||||||||||  ||||| ||||||| || ||   ||||||||| | | |||||||  |||| |||||||    
T  2148079 cgttttatgctattaatatggatgttgtgagtttgttcgcaaattcatcctttttgtttatagtgactttgaatttatattgtatcaacgtactctatca 2148178  T
Q  147 acttgaatgaattaatatcgtttatttttgtaa 179  Q
    | |||||||||  ||| ||| ||||||||||||    
T  2148179 atttgaatgaacgaatgtcg-ttatttttgtaa 2148210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 181
Target Start/End: Original strand, 22485304 - 22485439
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| ||| |||||||||||||||| |||||||  || ||||| | ||||| ||||| | | |||  || ||| ||||||||  ||||| |||||    
T  22485304 cgttttatgctatgaacatggatgttgtgagtttgttcatagattcatccattttgtttttagcgaatttagatttgtattgtatcgatgtattgtatca 22485403  T
Q  147 acttgaatg-aattaatatcgtttatttttgtaaaa 181  Q
    | || |||| ||| ||||||||||||||||||||||    
T  22485404 atttaaatgaaatgaatatcgtttatttttgtaaaa 22485439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 34960718 - 34960585
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    |||||||||||||||||||||| | ||||| ||||||  ||  ||||| ||||||| ||||| | | |||| || | | ||||||||  || | ||||||    
T  34960718 cgttttatgttattaacatggaagctgtgagtttgtttacatattcatcctttttgtttttagcgaatttggatttatattgtatcgatgtgt-ctatca 34960620  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | |||||||||| |||||||||||||||| |||||    
T  34960619 atttgaatgaatgaatatcgtttatttttataaaa 34960585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 36624052 - 36623919
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||  ||  ||||| ||||||| |||||   | |||| || | | ||||| ||  ||| |||||||    
T  36624052 cgttttatgctattaacatggatgttgtgattttgttaacaa-ttcatcctttttgtttttagtgaatttggatttatattgtaccgatgtactctatca 36623954  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | |||||||||| |||||| |||||||||||||||    
T  36623953 atttgaatgaatgaatatcatttatttttgtaaaa 36623919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 181
Target Start/End: Complemental strand, 42167855 - 42167717
Alignment:
Q  43 ctgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattct 142  Q
    ||||||||||||||||||||||||| |||||| | |||||| |||| ||||   |||||| ||||| ||| ||| ||| | | ||||||||   |  |||    
T  42167855 ctgtcgttttatgttattaacatggttgttgtaagtttgtttgcagattcaccatttttgtttttagcaattttaaatttatattgtatcgatattctct 42167756  T
Q  143 atcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
     |||| |||||||||| |||||| ||||||||| |||||    
T  42167755 gtcaatttgaatgaatgaatatcatttatttttataaaa 42167717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 3312766 - 3312892
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| ||||  ||||||| |||||   | |||| |||    ||||||||  ||| |||| ||    
T  3312766 cgttttatgctattaacatggatgttgtgactttgttcacagattcaacctttttgtttttagagaatttggata----ttgtatcgatgtactctacca 3312861  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||| ||||||||||||||    
T  3312862 atttgaatgaatgaatttcgtttatttttgt 3312892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 40365545 - 40365602
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttttt 101  Q
    |||||||||||| |||||||||||||||||||| ||||||||||| | ||| ||||||    
T  40365545 tgtcgttttatgctattaacatggatgttgtgagtttgttcgcagatgcatccttttt 40365602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 174
Target Start/End: Complemental strand, 41598264 - 41598139
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaac 148  Q
    |||||||||||||| |||||||||| || |||||| |||  || |||| ||||| |||||| |||||||||| ||| | |||| |  ||| | ||||||     
T  41598264 ttttatgttattaaaatggatgttgcgagtttgtttgcatattaattccttttgtttttaataactttgaatttgtatcgtattgatgtactatatcaat 41598165  T
Q  149 ttgaatgaattaatatcgtttatttt 174  Q
    || ||| ||| |||||||||||||||    
T  41598164 ttaaataaatgaatatcgtttatttt 41598139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 169
Target Start/End: Complemental strand, 4817660 - 4817548
Alignment:
Q  57 tattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatga 156  Q
    |||||||||||||||||||| ||||||| ||  ||||| ||||||| ||||||| | ||||||| | | ||||| |   ||| |||||||| ||||||||    
T  4817660 tattaacatggatgttgtgagtttgttcacatattcatgctttttgtttttaacgaatttgaatttatattgtaccaatgtactctatcaatttgaatga 4817561  T
Q  157 attaatatcgttt 169  Q
    || ||||| ||||    
T  4817560 ataaatattgttt 4817548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 25373887 - 25373823
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||||||||||| |||||||||| ||||||||| ||| ||||||| ||||| ||||||| |||||    
T  25373887 tgtcgttttatgctattaacatgaatgttgtgagttttttcgcagattcatcctttttgttttta 25373823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 181
Target Start/End: Original strand, 35175044 - 35175176
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| |||||||||||||| ||||| ||||||| ||  ||||||| ||||| |||||   | |||| || ||| ||||||| | ||| | ||    
T  35175044 tgtcgttttatgctattaacatggatgatgtgagtttgttcacaaattcattccttttgtttttagtgaatttggatttgtattgtatc-gagtactata 35175142  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||| |||||||    ||||||||||||||||||||||    
T  35175143 tcaatttgaatg----aatatcgtttatttttgtaaaa 35175176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 39610549 - 39610675
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| ||||||||||||   ||||| ||||||| ||| ||||| ||||||| ||||| | | ||||||| ||| |||||||   ||| ||||| |    
T  39610549 cgttttatgctattaacatgga---tgtgagtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtattgtatcaatgtactctatta 39610645  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||| ||||||||||    
T  39610646 atttgaatgaatgaatatcg-ttatttttgt 39610675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 48212648 - 48212692
Alignment:
Q  43 ctgtcgttttatgttattaacatggatgttgtgaatttgttcgca 87  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||    
T  48212648 ctgtcgtgttatgttattaacatggatgttgtgagtttgttcgca 48212692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 4019919 - 4019982
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttt 107  Q
    |||||||||||| |||||||||||||||||||| |||||| |||| |||||  |||||| ||||    
T  4019919 tgtcgttttatgctattaacatggatgttgtgagtttgtttgcagattcatcatttttgttttt 4019982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 181
Target Start/End: Complemental strand, 25939282 - 25939158
Alignment:
Q  51 ttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaactt 150  Q
    ||||| ||| ||||||||||||||||||||||||| || ||||| ||||||  ||||||      ||||| ||  ||||||||  ||| | |||||| ||    
T  25939282 ttatgctatcaacatggatgttgtgaatttgttcgtagattcatcctttttatttttaa------tgaatttgcattgtatcgatgtactttatcaattt 25939189  T
Q  151 gaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||||||| |||||| ||||| |||||||||    
T  25939188 gaatgaatgaatatcatttatatttgtaaaa 25939158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 33977715 - 33977652
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaac 110  Q
    |||||||||||||||||||||||||||||| | ||||  ||| ||||| ||||||| |||||||    
T  33977715 cgttttatgttattaacatggatgttgtgagtctgtttacagattcatcctttttgtttttaac 33977652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 47587194 - 47587103
Alignment:
Q  21 atagtcatatttgtagg-----atacactgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttt 107  Q
    |||||||||||||||||     |||| ||||||||||||| |||||||||| ||| ||||| ||||||||||| ||||| | ||||| ||||    
T  47587194 atagtcatatttgtaggcttttatactctgtcgttttatgctattaacatgaatgatgtgagtttgttcgcagattcatccattttgttttt 47587103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 175
Target Start/End: Complemental strand, 50981259 - 50981128
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| | |||| ||||| ||||||| ||| ||||||  |||||  |||||| ||||| | ||||| ||| |||  | ||| |  ||| ||||    
T  50981259 tgtcgttttatgcttttaatatggaagttgtgagtttattcgcatattcatcatttttgtttttagcgactttaaatttgtactatattgatgtactcta 50981160  T
Q  144 tcaacttgaatgaattaatatcgtttattttt 175  Q
    |||| |||||||||| ||||||||||||||||    
T  50981159 tcaatttgaatgaatgaatatcgtttattttt 50981128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 175
Target Start/End: Complemental strand, 51084393 - 51084262
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| | |||| ||||| ||||||| ||| ||||||  |||||  |||||| ||||| | ||||| ||| |||  | ||| |  ||| ||||    
T  51084393 tgtcgttttatgcttttaatatggaagttgtgagtttattcgcatattcatcatttttgtttttagcgactttaaatttgtactatattgatgtactcta 51084294  T
Q  144 tcaacttgaatgaattaatatcgtttattttt 175  Q
    |||| |||||||||| ||||||||||||||||    
T  51084293 tcaatttgaatgaatgaatatcgtttattttt 51084262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 43839307 - 43839253
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttttt 101  Q
    ||||||||| |||||||||||||||||||| | ||||| ||| ||||||||||||    
T  43839307 cgttttatgatattaacatggatgttgtgagtctgttcacagattcattcttttt 43839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 45047836 - 45047966
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||  |||||||||||||| ||||| ||||||| | | |||||  |||| | ||||| | | |||| || ||| ||||||||   || |||||||    
T  45047836 cgttttatcctattaacatggatgatgtgagtttgttcactgattcatcattttcgtttttagcgaatttggatttgtattgtatcgatatactctatca 45047935  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| |||||| |||||||||||    
T  45047936 atttgaatgaatgaatatcatttatttttgt 45047966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 50460515 - 50460569
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttg 102  Q
    |||||||||| |||||||||||||||||| ||||||||||  ||||| |||||||    
T  50460515 gttttatgttgttaacatggatgttgtgagtttgttcgcatattcatcctttttg 50460569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 19645531 - 19645659
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    |||||||| | |||||||| ||||||||| ||||||| ||  ||||| |||||   ||||| | | ||||||| ||  |||||| |  ||| ||||||||    
T  19645531 gttttatgcttttaacatg-atgttgtgagtttgttcacatattcatccttttcatttttagcgaatttgaatttgaattgtattgatgtactctatcaa 19645629  T
Q  148 cttgaatgaattaatatcgtttatttttgt 177  Q
     |||||||||| ||||||||||||||||||    
T  19645630 tttgaatgaatgaatatcgtttatttttgt 19645659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 28995099 - 28995038
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||||| |||||||||||||||||||| |||||||  || ||||| ||||||| |||||    
T  28995099 cgttttatgctattaacatggatgttgtgagtttgttcatagattcatcctttttgttttta 28995038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 22844373 - 22844413
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttc 84  Q
    |||||||||||| |||||||||||||||||||| |||||||    
T  22844373 tgtcgttttatgctattaacatggatgttgtgagtttgttc 22844413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 29776483 - 29776419
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||||||||| | ||||||||||| |||||||| |||| |||||| ||||| ||||||| |||||    
T  29776483 tgtcgttttacgctattaacatggttgttgtgagtttgatcgcagattcatcctttttgttttta 29776419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 30648616 - 30648552
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||| |||| ||||||| |||||||||||| ||||||||||| ||||| |||| || |||||    
T  30648616 tgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttatgttttta 30648552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 110
Target Start/End: Original strand, 42106461 - 42106525
Alignment:
Q  46 tcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaac 110  Q
    |||||||||| |||||||||||||| ||||| ||||||| ||| ||||| ||||| | |||||||    
T  42106461 tcgttttatgctattaacatggatgatgtgagtttgttcacagattcatccttttcgtttttaac 42106525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 175
Target Start/End: Complemental strand, 36691592 - 36691461
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||||||||||||| ||||||||||  ||| || ||  || || ||||| | |||||   | |||| || ||| ||||||||  ||| | ||    
T  36691592 tgtcgttttatgttattaacatagatgttgtgaggttgctcacaaatttatccttttcgtttttagtgaatttggatttgtattgtatcgatgtacttta 36691493  T
Q  144 tcaacttgaatgaattaatatcgtttattttt 175  Q
    || | |||||||||| ||||||||||||||||    
T  36691492 tcgatttgaatgaatgaatatcgtttattttt 36691461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 175
Target Start/End: Original strand, 51059991 - 51060122
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    ||||||||| |||||||||  |||||||||| | ||||||| ||  ||||| ||||||| ||||||  ||||| ||| ||| || |||||   || ||||    
T  51059991 tgtcgttttgtgttattaatgtggatgttgtaagtttgttcacatattcatcctttttgtttttaaggactttaaatctgtattctatcgatttactcta 51060090  T
Q  144 tcaacttgaatgaattaatatcgtttattttt 175  Q
    || | || ||||||| || |||||||||||||    
T  51060091 tcgatttaaatgaataaacatcgtttattttt 51060122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 174
Target Start/End: Original strand, 53402960 - 53403087
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||| | ||||||| ||  |||||  |||||| ||||| | | |||  || ||| ||||||||  ||| |||||||    
T  53402960 cgttttatgctattaacatggatgttgttagtttgttcacatattcatcatttttgtttttagcgaatttagatttgtattgtatcgatgtactctatca 53403059  T
Q  147 acttgaatgaattaatatcgtttatttt 174  Q
    | ||||||| || ||||| ||| |||||    
T  53403060 atttgaatgcatgaatattgttaatttt 53403087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 32237785 - 32237739
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcat 94  Q
    |||||||| |||||||||||||||||||  ||||||||||| |||||    
T  32237785 gttttatgctattaacatggatgttgtgtgtttgttcgcagattcat 32237739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 35175657 - 35175703
Alignment:
Q  136 gtattctatcaacttgaatgaattaatatcg-tttatttttgtaaaa 181  Q
    |||||||||||| |||||||||| ||||||| |||||||||||||||    
T  35175657 gtattctatcaatttgaatgaatgaatatcgttttatttttgtaaaa 35175703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 94
Target Start/End: Original strand, 50520104 - 50520154
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcat 94  Q
    |||||||||||| |||||||||||||||||||| | ||||| ||| |||||    
T  50520104 tgtcgttttatgctattaacatggatgttgtgagtctgttcacagattcat 50520154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 53962408 - 53962478
Alignment:
Q  18 aatatagtcatatttgtagg-----atacactgtcgttttatgttattaacatggatgttgtgaatttgtt 83  Q
    ||||||||||||||||||||     |||| |||| |||||||  | |||||||||||||||||||||||||    
T  53962408 aatatagtcatatttgtaggcatagatactctgttgttttatactgttaacatggatgttgtgaatttgtt 53962478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 913106 - 913053
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttt 100  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||| ||||| |||||    
T  913106 cgttttatgctattaacatggatgatgtgagtttgttcacagattcatcctttt 913053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 16235691 - 16235736
Alignment:
Q  136 gtattctatcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||||||||||| |||||||||| |||||| ||| |||||||||||    
T  16235691 gtattctatcaatttgaatgaataaatatcatttgtttttgtaaaa 16235736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 177
Target Start/End: Original strand, 19148328 - 19148445
Alignment:
Q  61 aacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatgaatta 160  Q
    |||||||||| ||||| ||||||| ||  ||||| |||||   ||||| | | ||||||| ||| ||||||||  |||  ||||||| |||||||||| |    
T  19148328 aacatggatgatgtgagtttgttcacatattcatccttttaatttttagcgaatttgaatttgtattgtatcgatgtacactatcaatttgaatgaatga 19148427  T
Q  161 a-tatcgtttatttttgt 177  Q
    | ||||||||||||||||    
T  19148428 aatatcgtttatttttgt 19148445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 27706049 - 27706004
Alignment:
Q  136 gtattctatcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||||||||||| |||||||||| |||||| ||| |||||||||||    
T  27706049 gtattctatcaatttgaatgaatgaatatcctttgtttttgtaaaa 27706004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 31730951 - 31731011
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||| ||||||||||||| |||||||||| ||||||||||  ||||| ||||||| |||||    
T  31730951 cgtttaatgttattaacat-gatgttgtgagtttgttcgcatattcatcctttttgttttta 31731011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 33794082 - 33794143
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaa 109  Q
    ||||||||||||||||||| |||||| || |||| |||||| ||||  ||||||| ||||||    
T  33794082 gttttatgttattaacatgaatgttgcgagtttgatcgcagcttcaacctttttgtttttaa 33794143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 84
Target Start/End: Complemental strand, 34103547 - 34103510
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttc 84  Q
    |||||| || ||||||||||||||||||||||||||||    
T  34103547 cgttttgtgctattaacatggatgttgtgaatttgttc 34103510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 181
Target Start/End: Complemental strand, 44984654 - 44984521
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    |||||||  |||||| ||||||| | ||| |||||||||| ||| || | ||||| |||||   | ||||||| ||| |||||||    || ||||||||    
T  44984654 gttttatactattaatatggatgctctgagtttgttcgcatgtttatcccttttgtttttagagattttgaatttgtattgtatcaatatactctatcaa 44984555  T
Q  148 cttgaatgaattaatatcgtttatttttgtaaaa 181  Q
     || |||||||  |||||||||||||||||||||    
T  44984554 tttaaatgaatggatatcgtttatttttgtaaaa 44984521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 25631420 - 25631368
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttt 99  Q
    |||| |||||||||||| |||||| ||||| ||||||||||| ||||| ||||    
T  25631420 cgttatatgttattaacttggatgatgtgagtttgttcgcagattcatccttt 25631368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 40797354 - 40797410
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttt 100  Q
    |||||||||||| ||||||||| |||| ||||| ||||||| ||| ||||| |||||    
T  40797354 tgtcgttttatgctattaacatagatgatgtgagtttgttcacagattcatcctttt 40797410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 48401180 - 48401236
Alignment:
Q  52 tatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||| |||||||||||||| ||||| ||||||| ||| ||||| ||||||| |||||    
T  48401180 tatgctattaacatggatgatgtgagtttgttcacagattcatcctttttgttttta 48401236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 50194249 - 50194197
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttt 99  Q
    |||| |||| ||||||| |||||||||||| ||||||||||| ||||| ||||    
T  50194249 cgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccttt 50194197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 5e-28; HSPs: 95)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 39532757 - 39532618
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||| ||| ||||| ||||||| ||  || || ||||||| ||||| | | ||||||| ||| ||||||||| ||| |||||||    
T  39532757 cgttttatgctattaacatgaatgatgtgagtttgttcacacatttatcctttttgtttttagcgaatttgaatttgtattgtatcggtgtactctatca 39532658  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaacaaat 186  Q
    | ||||||||||||||||||||||||||||||||| ||||    
T  39532657 atttgaatgaattaatatcgtttatttttgtaaaaaaaat 39532618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 45482346 - 45482525
Alignment:
Q  1 attccggagacttgaataatatagtcatatttgtagg-----atacactgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcatt 95  Q
    ||||||||||||||||||   ||||||||||||||||     ||||  |||||||||||| |||||||||||||||||||| ||||||| ||| |||||     
T  45482346 attccggagacttgaata---tagtcatatttgtaggtatagatactttgtcgttttatgctattaacatggatgttgtgagtttgttcacagattcatc 45482442  T
Q  96 ctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||||   ||||| | | |||| || ||| ||||||||  ||| |||||||| |||||||||||||||||||||| |||| |||||    
T  45482443 ctttt---ttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaattaatatcgtttacttttttaaaa 45482525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 44 - 187
Target Start/End: Complemental strand, 4621165 - 4621022
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||| ||||||| |||||||||| ||||||||| ||||||  ||| ||||| ||||||| ||||||| | |||| || ||  ||||||||  ||| ||||    
T  4621165 tgtcattttatgctattaacatgaatgttgtgagtttgttaacagattcatcctttttgtttttaacgaatttggatttgaattgtatcgatgtactcta 4621066  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgtaaaacaaatt 187  Q
    |||| |||||||||| |||||||||||||||||||||| |||||    
T  4621065 tcaatttgaatgaatgaatatcgtttatttttgtaaaaaaaatt 4621022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 5238242 - 5238403
Alignment:
Q  18 aatatagtcatatttgtaggatac--actgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactt 115  Q
    ||||||||||||||||||| |||   ||||||||||||||||||||||||||||| ||||| ||||||| ||  ||||| ||||||  ||||||| | ||    
T  5238242 aatatagtcatatttgtagcatatgtactgtcgttttatgttattaacatggatgatgtgagtttgttctcaaattcatcctttttatttttaacgattt 5238341  T
Q  116 tgaatatgtgttgtatcggcgtattctatcaacttgaatgaattaatatcgtttatttttgt 177  Q
    ||||| ||| |||||| |  ||| ||| |||| |||||||||| |||||| ||||| |||||    
T  5238342 tgaatttgtattgtatggatgtactctgtcaatttgaatgaataaatatcttttatgtttgt 5238403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 21991001 - 21991131
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||| ||  ||||| ||||||| ||||| | | |||| || ||| ||||||||  ||| |||||||    
T  21991001 cgttttatgctattaacatggatgttgtgagtttgttcacatattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatca 21991100  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  21991101 atttgaatgaatgaatatcgtttatttttgt 21991131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 177
Target Start/End: Original strand, 36253266 - 36253399
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| |||||||| ||||||||||| ||||||| ||| ||| | ||||||| ||||| ||| |||| || ||| ||||||||  ||| ||||    
T  36253266 tgtcgttttatgctattaacacggatgttgtgagtttgttcacagattcttcctttttgtttttagcaaatttggatttgtattgtatcgatgtactcta 36253365  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgt 177  Q
    |||| |||||||||| | ||||||||||||||||    
T  36253366 tcaatttgaatgaatgagtatcgtttatttttgt 36253399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 6667736 - 6667864
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaac 148  Q
    ||||||| |||||||||||||||||||| |||||||  || ||||| ||||||| ||||| | | ||||||| ||| ||||||||  ||  ||||||||     
T  6667736 ttttatgctattaacatggatgttgtgagtttgttcatagattcatcctttttgtttttagcgaatttgaatttgtattgtatcgatgtgctctatcaat 6667835  T
Q  149 ttgaatgaattaatatcgtttatttttgt 177  Q
    |||||||||| ||||||||||||||||||    
T  6667836 ttgaatgaatgaatatcgtttatttttgt 6667864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 41288295 - 41288425
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||| ||||| ||||||| |||||   | ||||||| ||| ||||||||  ||| |||||||    
T  41288295 cgttttatgctattaacatggatgatgtgagtttgttcacagattcatcctttttgtttttagtgaatttgaatttgtattgtatcgatgtactctatca 41288394  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||  ||||||||||||||||||    
T  41288395 atttgaatgaaagaatatcgtttatttttgt 41288425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 172
Target Start/End: Original strand, 32643307 - 32643432
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||| | ||||| |||||||  || ||||| ||||||| ||||||| | |||| || | | ||||||||| ||| |||||||    
T  32643307 cgttttatgctattaacatggaagatgtgagtttgttcatagattcatcctttttgtttttaacgaatttggatttatattgtatcggtgtactctatca 32643406  T
Q  147 acttgaatgaattaatatcgtttatt 172  Q
    |||||||||||| |||||||||||||    
T  32643407 acttgaatgaatgaatatcgtttatt 32643432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 44 - 181
Target Start/End: Original strand, 37593419 - 37593556
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| ||||||||||||| |||||| ||||||| ||| |||||  |||||| ||||| | | |||  || ||| ||||||||  ||| || |    
T  37593419 tgtcgttttatgctattaacatggatattgtgagtttgttcacagattcatcatttttgtttttagcgaatttagatttgtattgtatcgatgtactcca 37593518  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  37593519 tcaatttgaatgaatgaatatcgtttatttttgtaaaa 37593556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 44 - 177
Target Start/End: Complemental strand, 46025840 - 46025707
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| |||||||||||||| ||||| |||||||  || ||||| ||||||| ||||| | | |||| || ||| ||||||||  ||| | ||    
T  46025840 tgtcgttttatgctattaacatggatgctgtgagtttgttcaaagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtacttta 46025741  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgt 177  Q
    |||| |||||||||| ||||||||||||||||||    
T  46025740 tcaatttgaatgaatgaatatcgtttatttttgt 46025707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 175
Target Start/End: Original strand, 11833357 - 11833485
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||| ||||||||||||| ||||||| ||| ||||| ||||||| ||||| | | |  |||| ||| ||||||||  ||| |||||||    
T  11833357 cgttttatgctattaatatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatgcgaatttgtattgtatcgatgtactctatca 11833456  T
Q  147 acttgaatgaattaatatcgtttattttt 175  Q
    | |||||||||| ||||||||||||||||    
T  11833457 atttgaatgaatgaatatcgtttattttt 11833485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 9785656 - 9785786
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||  ||||||| ||| | ||||| ||| |||| || ||| ||||||||  |||  ||||||    
T  9785656 cgttttatgctattaacatggatgatgtgagtttgttcacaaattcattcatttagtttttagcaaatttggatttgtattgtatcgatgtaccctatca 9785755  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  9785756 atttgaatgaatgaatatcgtttatttttgt 9785786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 45457338 - 45457208
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||| ||||||||||||| ||||||| ||| ||||| ||||||| ||||| | | ||||||| |||  ||| |||  ||| |||||||    
T  45457338 cgttttatgctattaatatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtactgtgtcgatgtactctatca 45457239  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||| ||||||||||||    
T  45457238 atttgaatgaatcaatattgtttatttttgt 45457208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 21603797 - 21603930
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||| | |||||||||||||||||||| ||||||| ||| ||||  ||||||  ||||||  | ||||||| ||| |||||| |  ||| |||||||    
T  21603797 cgttttacgctattaacatggatgttgtgagtttgttcacagattcaccctttttctttttaatgaatttgaatttgtattgtattgatgtactctatca 21603896  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaa 180  Q
    | |||||||||| ||||||||| |||||||||||    
T  21603897 atttgaatgaatgaatatcgttaatttttgtaaa 21603930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 186
Target Start/End: Complemental strand, 44482650 - 44482521
Alignment:
Q  57 tattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatga 156  Q
    |||||||||||||| ||||| ||| ||| || |||||| ||||||| ||||| ||| |||| || | | || |||||  ||| |||||||| ||||||||    
T  44482650 tattaacatggatgatgtgagtttattcacatgttcatcctttttgtttttagcaaatttggatttatattatatcgatgtactctatcaatttgaatga 44482551  T
Q  157 attaatatcgtttatttttgtaaaacaaat 186  Q
    || |||||||||||||||||||||| ||||    
T  44482550 atgaatatcgtttatttttgtaaaaaaaat 44482521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 32741048 - 32741212
Alignment:
Q  18 aatatagtcatatttgtagg-----atacactgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaa 112  Q
    ||||||||||||||||||||     ||||  ||| |||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||| |||||   |    
T  32741048 aatatagtcatatttgtaggcatatatactttgttgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagtga 32741147  T
Q  113 ctttgaatatgtgttgtatcggcgtattctatcaacttgaatgaattaatatcgtttatttttgt 177  Q
     |||  || ||| ||||||||   || |||||||| |||||| ||| ||||||||||||||||||    
T  32741148 atttagatttgtattgtatcgatatactctatcaatttgaataaatgaatatcgtttatttttgt 32741212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 181
Target Start/End: Original strand, 3266713 - 3266847
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| |||||||||||||||   || |||||||  || ||||| ||||||| ||||||| | ||||||| ||| |||||||   ||| | ||    
T  3266713 tgtcgttttatgctattaacatggatgt---gagtttgttcatagattcatcctttttgtttttaacgaatttgaatttgtattgtatcaatgtacttta 3266809  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||| |||||||||| ||||| ||||||||||||||||    
T  3266810 tcaatttgaatgaatgaatattgtttatttttgtaaaa 3266847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 170
Target Start/End: Complemental strand, 22747291 - 22747168
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||||| ||||||| |||  |||| ||||||| |||||  || ||||||| | | ||||||||  ||| |||||||    
T  22747291 cgttttatgctattaacatggatgatgtgagtttgttcacagaatcatcctttttgtttttagtaaatttgaatttatattgtatcgatgtactctatca 22747192  T
Q  147 acttgaatgaattaatatcgttta 170  Q
    | |||||||||| |||||||||||    
T  22747191 atttgaatgaatcaatatcgttta 22747168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 173
Target Start/End: Complemental strand, 42603561 - 42603435
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| ||||||||| |||||||||| ||||||| ||| ||||| | ||||| ||||| | | ||||||| | | ||||||||  ||| |||||||    
T  42603561 cgttttatgctattaacatagatgttgtgagtttgttcacagattcatccgttttgtttttagcgaatttgaatttatattgtatcgatgtactctatca 42603462  T
Q  147 acttgaatgaattaatatcgtttattt 173  Q
    | |||||||||| || |||||||||||    
T  42603461 atttgaatgaatgaacatcgtttattt 42603435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 48304174 - 48304040
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||| ||| ||||||| ||  ||||| ||||||| |||||   |  ||| || ||| ||||||||  ||| | |||||    
T  48304174 cgttttatgctattaacatggatgttatgagtttgttcacatattcatcctttttgtttttagtgaaattggatttgtattgtatcgatgtactttatca 48304075  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | |||||||||| ||||||||||||||||||||||    
T  48304074 atttgaatgaatgaatatcgtttatttttgtaaaa 48304040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 181
Target Start/End: Complemental strand, 1280917 - 1280785
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaac 148  Q
    ||||||| |||||||||||||| | ||| ||||||| ||| ||||| ||||||| ||||| | | |||| || ||| || |||||  ||| ||||||||     
T  1280917 ttttatgctattaacatggatgctatgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattatatcgatgtactctatcaat 1280818  T
Q  149 ttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||||| ||| |||||||||||||||| |||||    
T  1280817 ttgaataaatgaatatcgtttatttttttaaaa 1280785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 176
Target Start/End: Complemental strand, 37375840 - 37375709
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| |||||||||||||| ||||| ||||||| ||  ||||| | ||||| ||||| | | |||| || ||| |||||||   ||| ||||    
T  37375840 tgtcgttttatgctattaacatggatgctgtgagtttgttcacatattcatcccttttgtttttagcgaatttggatttgtattgtatcat-gtactcta 37375742  T
Q  144 tcaacttgaatgaattaatatcgtttatttttg 176  Q
    |||| |||||||||| |||||||||||||||||    
T  37375741 tcaatttgaatgaatgaatatcgtttatttttg 37375709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 167
Target Start/End: Original strand, 42644994 - 42645114
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||| ||||| | | |||  |  ||| ||||||||  ||| |||||||    
T  42644994 cgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttagacttgtattgtatcgatgtactctatca 42645093  T
Q  147 acttgaatgaattaatatcgt 167  Q
    | |||||||||| ||||||||    
T  42645094 atttgaatgaatgaatatcgt 42645114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 181
Target Start/End: Complemental strand, 7765656 - 7765525
Alignment:
Q  51 ttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaactt 150  Q
    ||||| |||||| ||||||||||||||||||||||||  || || || |||  |||||   ||||||||| ||| ||||||||  ||| |||||||| ||    
T  7765656 ttatgctattaatatggatgttgtgaatttgttcgcatatttatcctatttatttttagatactttgaatttgtattgtatcgatgtactctatcaattt 7765557  T
Q  151 -gaatgaattaatatcgtttatttttgtaaaa 181  Q
     |||| ||| ||||||||||||||||||||||    
T  7765556 tgaattaatgaatatcgtttatttttgtaaaa 7765525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 79 - 170
Target Start/End: Original strand, 20206157 - 20206248
Alignment:
Q  79 ttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatgaattaatatcgttta 170  Q
    |||||||||| ||||||||||||| |||||   ||||||||| ||||||||||||  ||| ||| |||| |||||||||| |||||||||||    
T  20206157 ttgttcgcagattcattctttttgtttttagatactttgaatttgtgttgtatcgatgtactctgtcaatttgaatgaatgaatatcgttta 20206248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 175
Target Start/End: Original strand, 27535764 - 27535894
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| |||||||||||||||||||| ||||||  ||  ||||| ||| ||| |||| || | |||| || ||| ||||||||  ||| ||||    
T  27535764 tgtcgttttatgctattaacatggatgttgtgagtttgtt-acatattcatccttgttgtttttgacgaatttgtatttgtattgtatcgatgtactcta 27535862  T
Q  144 tcaacttgaatgaattaatatcgtttattttt 175  Q
    |||| || ||||||| ||||||||||||||||    
T  27535863 tcaatttaaatgaataaatatcgtttattttt 27535894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 57 - 181
Target Start/End: Complemental strand, 39989963 - 39989837
Alignment:
Q  57 tattaacatggatgttgtgaatttgttcgcaggttcattctttttgg--ttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaat 154  Q
    ||||||||||||||||||||  ||||| |||||||||| ||||||    ||||| ||||||| ||| | | |||||| | |||| |||||||| ||||||    
T  39989963 tattaacatggatgttgtgagcttgtttgcaggttcatcctttttttatttttagcaactttaaatttatattgtattgacgtactctatcaatttgaat 39989864  T
Q  155 gaattaatatcgtttatttttgtaaaa 181  Q
    | || |||||| |||||||||||||||    
T  39989863 gcatgaatatcatttatttttgtaaaa 39989837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 17508986 - 17508856
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||| ||||| | | |||  || ||| ||||||||  ||| |||||||    
T  17508986 cgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttagatttgtattgtatcgatgtactctatca 17508887  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | || || |||| |||||| |||| ||||||    
T  17508886 atttaaaagaatgaatatcatttacttttgt 17508856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 17544228 - 17544358
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||| ||||| | | |||  || ||| ||||||||  ||| |||||||    
T  17544228 cgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttagatttgtattgtatcgatgtactctatca 17544327  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | || || |||| |||||| |||| ||||||    
T  17544328 atttaaaagaatgaatatcatttacttttgt 17544358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 36579123 - 36578989
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||| ||||| ||||||| ||||| | | ||||||| | | || |||    ||| |||||||    
T  36579123 cgttttatgctattaacatggatgatgtgagtttgttcacagattcatcctttttgtttttagcgaatttgaatttatattatattaatgtactctatca 36579024  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | ||||| |||| |||||||||||||||| |||||    
T  36579023 atttgaacgaatgaatatcgtttatttttttaaaa 36578989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 177
Target Start/End: Original strand, 2622928 - 2623061
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||| ||||| |||||||||| ||||||||| ||||||| ||| |||||  |||||| ||||| ||| |||  || | | || ||| |  ||| ||||    
T  2622928 tgtcgtcttatgctattaacatgaatgttgtgagtttgttcacagattcatcatttttgtttttatcaaatttagatttatattatatagatgtactcta 2623027  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgt 177  Q
    |||| |||||||||| ||||||||||||||||||    
T  2623028 tcaatttgaatgaatgaatatcgtttatttttgt 2623061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 21329088 - 21329027
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||||| |||||||||||||||||||||||||||| ||| ||||| ||||||| |||||    
T  21329088 cgttttatgctattaacatggatgttgtgaatttgttcacagattcatcctttttgttttta 21329027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 180
Target Start/End: Complemental strand, 24320005 - 24319872
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| ||| |||||||||||||||| ||||||| ||  |||||  |||||| ||||| | | |||  || ||| ||||||||  ||| |||||||    
T  24320005 cgttttatgctatcaacatggatgttgtgagtttgttcacatattcatcttttttgtttttagcgaatttagatttgtattgtatcgatgtactctatca 24319906  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaa 180  Q
    | || ||||||| |||||||||||||||| ||||    
T  24319905 atttaaatgaatgaatatcgtttatttttataaa 24319872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 31254910 - 31254785
Alignment:
Q  50 tttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaact 149  Q
    ||||||||||||| ||  ||||||||| ||||||||  |  || | ||||||  ||||| ||||||||||| ||| ||||||||  ||| |||||||| |    
T  31254910 tttatgttattaatatatatgttgtgagtttgttcgtcgaatcgtcctttttatttttagcaactttgaatttgtattgtatcgatgtaatctatcaatt 31254811  T
Q  150 tgaatgaattaatatcgtttattttt 175  Q
    ||||||||| |||||| |||||||||    
T  31254810 tgaatgaatgaatatcctttattttt 31254785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 9137733 - 9137861
Alignment:
Q  50 tttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttt-aacaactttgaatatgtgttgtatcggcgtattctatcaac 148  Q
    |||||| |||||||||||||||||| | ||||||||||| ||||| |||||| ||||| |||||||||  || | | ||  || |  ||| ||||||||     
T  9137733 tttatgctattaacatggatgttgtaagtttgttcgcagattcatccttttttgttttaaacaactttagatttttattaaattgatgtactctatcaat 9137832  T
Q  149 ttgaatgaattaatatcgtttatttttgt 177  Q
    |||||||||| |||||| |||||||||||    
T  9137833 ttgaatgaataaatatcttttatttttgt 9137861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 181
Target Start/End: Original strand, 26161304 - 26161427
Alignment:
Q  57 tattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatga 156  Q
    |||||||||||||| ||||| ||||||| ||| ||||| ||||||| ||||| | | ||||||| ||| || |||||   || |||||||| ||||||||    
T  26161304 tattaacatggatgatgtgagtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtatt-tatcgatatactctatcaatttgaatga 26161402  T
Q  157 attaatatcgtttatttttgtaaaa 181  Q
    || |||| | |||||||||||||||    
T  26161403 ataaataacatttatttttgtaaaa 26161427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 181
Target Start/End: Complemental strand, 32587317 - 32587190
Alignment:
Q  51 ttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaactt 150  Q
    ||||| |||||||||||||||||||| ||||||||||  ||||| ||||||| |||||   ||||||||  ||| |||||     ||| || ||||| ||    
T  32587317 ttatgatattaacatggatgttgtgagtttgttcgcatattcatcctttttgtttttagtgactttgaaattgtattgta---atgtactcgatcaattt 32587221  T
Q  151 gaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||||||| ||||| ||||||||||||||||    
T  32587220 gaatgaatgaatattgtttatttttgtaaaa 32587190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 37714769 - 37714937
Alignment:
Q  18 aatatagtcatatttgtagg-----atacactgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaa 112  Q
    ||||||||||||||||||||     |||| || | ||||||||||||| ||||||||||||||| ||||||||||  |||||  |||||  ||||   ||    
T  37714769 aatatagtcatatttgtaggcatatatactcttttgttttatgttatttacatggatgttgtgagtttgttcgcatattcatcttttttatttttcttaa 37714868  T
Q  113 ctttgaatatgtgttgtatcggcgtattctatcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||||||| ||| |||||||   ||  ||  |||| || ||||||| |||||||||||||||| |||||    
T  37714869 ctttgaatttgtattgtatcaatgtgctcggtcaatttaaatgaatgaatatcgtttatttttttaaaa 37714937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 47156706 - 47156770
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||||||||||||||||||||||||||||| | ||||| ||  ||||||||||||| |||||    
T  47156706 tgtcgttttatgttattaacatggatgttgtgagtctgttcacaaattcattctttttgttttta 47156770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 175
Target Start/End: Original strand, 9137277 - 9137407
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||| ||||||| |||||||||||||| ||||| |||||||| |  ||||| ||||||| ||||| ||||||||||| |||  ||  |||  | | ||||    
T  9137277 tgtcattttatgctattaacatggatgatgtgagtttgttcgtaaattcatcctttttgtttttagcaactttgaatttgtactgggtcgatgcactcta 9137376  T
Q  144 tcaacttgaatgaattaatatcgtttattttt 175  Q
    |||| |||||||||  ||||||||||||||||    
T  9137377 tcaatttgaatgaa-gaatatcgtttattttt 9137407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 181
Target Start/End: Original strand, 39707622 - 39707741
Alignment:
Q  62 acatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatgaattaa 161  Q
    ||||||||| ||||| ||||||||||| ||||| |||||   ||||| | |||||  |||||| |||||| |    | |||||||| |||||||||| ||    
T  39707622 acatggatgctgtgagtttgttcgcagattcatccttttcatttttagcgactttcgatatgtattgtattgatccactctatcaatttgaatgaatgaa 39707721  T
Q  162 tatcgtttatttttgtaaaa 181  Q
    ||||||||||||||||||||    
T  39707722 tatcgtttatttttgtaaaa 39707741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 178
Target Start/End: Original strand, 38273229 - 38273359
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    |||||||| |||||||||||||||||||| |||||| |||  ||||| ||||||| ||||||  |||||| || | | |||||||   ||| ||| ||||    
T  38273229 gttttatgctattaacatggatgttgtgagtttgttagcaaattcatcctttttgtttttaaggactttggatttatattgtatcaatgtactctgtcaa 38273328  T
Q  148 cttgaatgaattaatatcgtttatttttgta 178  Q
     || ||||||| ||||| |||||||| ||||    
T  38273329 tttaaatgaataaatattgtttatttatgta 38273359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 186
Target Start/End: Complemental strand, 17473533 - 17473404
Alignment:
Q  57 tattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatga 156  Q
    |||||||||||||||||||| ||||||| ||| ||||| ||||||| ||||| | | |||  || ||| ||||| ||  ||| |||||||| ||||| ||    
T  17473533 tattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttagatttgtattgtaccgatgtactctatcaatttgaaaga 17473434  T
Q  157 attaatatcgtttatttttgtaaaacaaat 186  Q
    || |||||| |||| |||||| ||| ||||    
T  17473433 atgaatatcatttacttttgtcaaaaaaat 17473404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 186
Target Start/End: Original strand, 17579681 - 17579810
Alignment:
Q  57 tattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatga 156  Q
    |||||||||||||||||||| ||||||| ||| ||||| ||||||| ||||| | | |||  || ||| ||||| ||  ||| |||||||| ||||| ||    
T  17579681 tattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttagatttgtattgtaccgatgtactctatcaatttgaaaga 17579780  T
Q  157 attaatatcgtttatttttgtaaaacaaat 186  Q
    || |||||| |||| |||||| ||| ||||    
T  17579781 atgaatatcatttacttttgtcaaaaaaat 17579810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 88
Target Start/End: Original strand, 22751726 - 22751767
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcag 88  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  22751726 cgttttatgttattaacatagatgttgtgaatttgttcgcag 22751767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 28015681 - 28015742
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||| |||||    
T  28015681 cgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgttttta 28015742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 35141452 - 35141399
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttttt 101  Q
    ||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  35141452 gttttatattattaacatggatgttgtgagtttgttcgcagattcatccttttt 35141399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 167
Target Start/End: Complemental strand, 36719343 - 36719222
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattc-tttttggttttaacaactttgaatatgtgttgtatcggcgtattctatc 145  Q
    ||||||||| |||||||||||||||||||| ||||||| ||  ||||| | |||||| ||||| | | |||| || ||| ||||||||  | | ||||||    
T  36719343 cgttttatgctattaacatggatgttgtgagtttgttcacaaattcatccttttttgtttttagcgaatttggatttgtattgtatcgatgcactctatc 36719244  T
Q  146 aacttgaatgaattaatatcgt 167  Q
    || |||||||||| ||||||||    
T  36719243 aatttgaatgaatgaatatcgt 36719222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 10624134 - 10624249
Alignment:
Q  59 ttaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatgaat 158  Q
    |||||||||||| ||||| |||||| |||| |||| || ||||| ||||||||||||| ||| ||| ||||||||  |||    ||||| || |||||||    
T  10624134 ttaacatggatgatgtgagtttgtttgcagattca-tccttttgtttttaacaacttttaatttgtcttgtatcgatgtacataatcaatttaaatgaat 10624232  T
Q  159 taatatcgtttattttt 175  Q
     ||||||||||||||||    
T  10624233 gaatatcgtttattttt 10624249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 39544828 - 39544776
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttttt 101  Q
    ||||||||||||||||||||| |||||| ||||||||||| ||||| ||||||    
T  39544828 ttttatgttattaacatggatattgtgagtttgttcgcagattcatccttttt 39544776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 158
Target Start/End: Original strand, 5684694 - 5684805
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||| | ||||||| ||  ||||| ||  ||| ||||| | | ||||||| ||| ||||||||| ||| |||||||    
T  5684694 cgttttatgctattaacatggatgctgtaagtttgttcacacattcatcctggttgtttttagcgagtttgaatttgtattgtatcggtgtactctatca 5684793  T
Q  147 acttgaatgaat 158  Q
    | ||||||||||    
T  5684794 atttgaatgaat 5684805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 158
Target Start/End: Original strand, 5709744 - 5709855
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||| | ||||||| ||  ||||| ||  ||| ||||| | | ||||||| ||| ||||||||| ||| |||||||    
T  5709744 cgttttatgctattaacatggatgctgtaagtttgttcacacattcatcctggttgtttttagcgagtttgaatttgtattgtatcggtgtactctatca 5709843  T
Q  147 acttgaatgaat 158  Q
    | ||||||||||    
T  5709844 atttgaatgaat 5709855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 17230444 - 17230511
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaacttt 116  Q
    ||||||| ||||||||||||||||||||  |||||||||| |||||  |||||| ||||| |||||||    
T  17230444 ttttatgctattaacatggatgttgtgaggttgttcgcagattcatgatttttgtttttagcaacttt 17230511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 26017448 - 26017324
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| | ||||| ||| ||||| ||||||| |||||       ||||| | | || |||||  ||| |||||||    
T  26017448 cgttttatgctattaacatggatgttgtgagtctgttcacagattcatcctttttgttttta------gtgaatttatattatatcgatgtactctatca 26017355  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| |||||| |||||||||||    
T  26017354 atttgaatgaatgaatatcatttatttttgt 26017324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 5654974 - 5654940
Alignment:
Q  38 atacactgtcgttttatgttattaacatggatgtt 72  Q
    |||||||||||||||||||||||||||||||||||    
T  5654974 atacactgtcgttttatgttattaacatggatgtt 5654940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 15674135 - 15674017
Alignment:
Q  57 tattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatga 156  Q
    |||||| ||||||||||||| ||||||| ||  ||||||||||| | |||||   | ||||||| ||| || |||||  ||| || ||||| ||||||||    
T  15674135 tattaatatggatgttgtgagtttgttcacatattcattcttttcgtttttagtgaatttgaatttgtattttatcgatgtactcaatcaatttgaatga 15674036  T
Q  157 attaatatcgtttattttt 175  Q
    || ||||||| ||||||||    
T  15674035 atgaatatcgcttattttt 15674017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 181
Target Start/End: Complemental strand, 28664734 - 28664604
Alignment:
Q  51 ttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaactt 150  Q
    ||||| ||||| |||| ||| ||||| ||||||| ||  ||||| ||||||| ||||| | | ||||||| ||  ||||||||  ||| |||||||| ||    
T  28664734 ttatgctattagcatgaatgctgtgagtttgttcacaaattcatcctttttgtttttagcgaatttgaatttgcattgtatcgatgtaatctatcaattt 28664635  T
Q  151 gaatgaattaatatcgtttatttttgtaaaa 181  Q
    ||||  ||  |||||||||||||||||||||    
T  28664634 gaatagatggatatcgtttatttttgtaaaa 28664604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 94
Target Start/End: Complemental strand, 35134994 - 35134944
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcat 94  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||| |||||    
T  35134994 tgtcgttttatgttattagtatggatgttgtgagtttgttcgcagattcat 35134944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 170
Target Start/End: Original strand, 6622733 - 6622846
Alignment:
Q  57 tattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatga 156  Q
    |||| |||| |||||||||| |||||| |||| |||||  |||||  ||| ||||| |||| || ||| ||||||||   ||||||||||  ||||||||    
T  6622733 tatttacatagatgttgtgagtttgtttgcagattcatggtttttattttgaacaattttgtatttgtattgtatcgatatattctatcagtttgaatga 6622832  T
Q  157 attaatatcgttta 170  Q
    || |||||||||||    
T  6622833 atgaatatcgttta 6622846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 35133215 - 35133260
Alignment:
Q  136 gtattctatcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||||||||||| |||||||||| |||||| |||||||||||||||    
T  35133215 gtattctatcaatttgaatgaatgaatatcctttatttttgtaaaa 35133260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 38649148 - 38649087
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||||| || |||||||||||||||||||| ||||||||||  ||||| ||||||| |||||    
T  38649148 cgttttttgctattaacatggatgttgtgagtttgttcgcatattcatcctttttgttttta 38649087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 46918723 - 46918784
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||||| |||||||||| ||| ||||| ||||||||||| ||||| ||||||| |||||    
T  46918723 cgttttatgctattaacatgtatgctgtgagtttgttcgcagattcatcctttttgttttta 46918784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 47300589 - 47300690
Alignment:
Q  21 atagtcatatttgtagg-----atacactgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactt 115  Q
    |||||||||||||||||     |||| ||||| |||||||||||| ||||| ||||| ||| ||||||||||  || ||| |||||| ||||| ||||||    
T  47300589 atagtcatatttgtaggtatatatactctgtcattttatgttattgacatgaatgttatgagtttgttcgcatatttattttttttgtttttagcaactt 47300688  T
Q  116 tg 117  Q
    ||    
T  47300689 tg 47300690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 5024849 - 5024785
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||||||| ||| |||||||||||||||||||| ||||||| ||| |||||  |||||| |||||    
T  5024849 tgtcgtttcatgctattaacatggatgttgtgagtttgttcacagattcatcatttttgttttta 5024785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 175
Target Start/End: Complemental strand, 21954615 - 21954487
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||| ||| |||||  |||| || || ||||||  ||||| ||| |||| || | | ||||| ||  ||| |||||||    
T  21954615 cgttttatgctattaacatggatgttctgagtttgtctgcagatttatcctttttcattttagcaattttggatttatattgtaacgatgtagtctatca 21954516  T
Q  147 acttgaatgaattaatatcgtttattttt 175  Q
    | || ||| ||| ||||||||||||||||    
T  21954515 attttaataaatgaatatcgtttattttt 21954487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 181
Target Start/End: Complemental strand, 33902099 - 33901975
Alignment:
Q  58 attaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaac-tttgaatatgtgttgtatcggcgtattctatcaacttgaatga 156  Q
    |||| |||| ||||||||| ||| ||||||  || || ||||||| ||||||| || ||||||| ||| |||||||    ||||||||||| || | |||    
T  33902099 attagcatgaatgttgtgagtttattcgcaaattaatcctttttgtttttaacgacctttgaatgtgtattgtatcaatatattctatcaatttaagtga 33902000  T
Q  157 attaatatcgtttatttttgtaaaa 181  Q
    || |||||||||||||| |||||||    
T  33901999 atgaatatcgtttatttgtgtaaaa 33901975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 43483909 - 43483971
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttt 107  Q
    |||||||||||| |||||||||||||| ||||| ||||||| ||| |||| ||||||| |||||    
T  43483909 tgtcgttttatgctattaacatggatgatgtgagtttgttcacagattca-tctttttcgtttt 43483971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 94
Target Start/End: Complemental strand, 7640672 - 7640622
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcat 94  Q
    ||||||| |||| ||||||| |||||||||||| ||||||||||| |||||    
T  7640672 tgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcat 7640622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 186
Target Start/End: Complemental strand, 15017178 - 15017096
Alignment:
Q  104 ttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatgaattaatatcgtttatttttgtaaaacaaat 186  Q
    ||||||| | ||||||| ||| ||||||||  ||||| |||||| |||||| ||| ||||||||||| |||||| ||| ||||    
T  15017178 ttttaacgaatttgaatttgtattgtatcgatgtattttatcaatttgaatcaataaatatcgtttaattttgtcaaaaaaat 15017096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 83
Target Start/End: Original strand, 23274329 - 23274363
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgtt 83  Q
    ||||||||||||||||| |||||||||||||||||    
T  23274329 ttttatgttattaacattgatgttgtgaatttgtt 23274363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 83
Target Start/End: Original strand, 23274411 - 23274445
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgtt 83  Q
    ||||||||||||||||| |||||||||||||||||    
T  23274411 ttttatgttattaacattgatgttgtgaatttgtt 23274445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 83
Target Start/End: Original strand, 23274493 - 23274527
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgtt 83  Q
    ||||||||||||||||| |||||||||||||||||    
T  23274493 ttttatgttattaacattgatgttgtgaatttgtt 23274527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 83
Target Start/End: Original strand, 23274575 - 23274609
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgtt 83  Q
    ||||||||||||||||| |||||||||||||||||    
T  23274575 ttttatgttattaacattgatgttgtgaatttgtt 23274609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 83
Target Start/End: Original strand, 23303801 - 23303835
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgtt 83  Q
    ||||||||||||||||| |||||||||||||||||    
T  23303801 ttttatgttattaacattgatgttgtgaatttgtt 23303835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 81
Target Start/End: Complemental strand, 27704867 - 27704833
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttg 81  Q
    |||||||||||||||||||||||||||||| ||||    
T  27704867 cgttttatgttattaacatggatgttgtgagtttg 27704833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 38277229 - 38277267
Alignment:
Q  140 tctatcaacttgaatgaattaatatcgtttatttttgta 178  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  38277229 tctatcaatttgaatgaatgaatatcgtttatttttgta 38277267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 94
Target Start/End: Original strand, 44681781 - 44681831
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcat 94  Q
    |||||||||| | |||||||||||||||||||  ||||||||||| |||||    
T  44681781 tgtcgttttaagctattaacatggatgttgtgcgtttgttcgcagattcat 44681831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 45349713 - 45349667
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttca 93  Q
    ||||||||| ||||||| ||| |||||||| ||||||||||||||||    
T  45349713 cgttttatgctattaacttgggtgttgtgagtttgttcgcaggttca 45349667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 7986213 - 7986286
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttg 117  Q
    |||||||||||| ||||||||||||||||||||   ||||| ||| |||||  |||||| ||||| ||| ||||    
T  7986213 tgtcgttttatgctattaacatggatgttgtgagcctgttcacagattcatcttttttgtttttagcaaatttg 7986286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 177
Target Start/End: Original strand, 17222528 - 17222565
Alignment:
Q  140 tctatcaacttgaatgaattaatatcgtttatttttgt 177  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  17222528 tctatcaacttgaatgaattcatatcatttatttttgt 17222565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 21552244 - 21552175
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttg 117  Q
    ||||||||||||||||||||||| ||||| |||||||  || ||||| | ||||| ||||| ||| ||||    
T  21552244 gttttatgttattaacatggatgatgtgagtttgttcatagattcatcccttttgtttttagcaaatttg 21552175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 169
Target Start/End: Complemental strand, 24988285 - 24988160
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||  ||||||||| |||||||||| |||||||  |  |||||  |||||| ||||| | | |||| || ||| || |||||  ||||||||    
T  24988285 tgtcgttttatactattaacatagatgttgtgattttgttcatatattcatcatttttgtttttagcgaatttggatttgtattatatcgatgtattcta 24988186  T
Q  144 tcaacttgaatgaattaatatcgttt 169  Q
    |||| || ||||||| ||||| ||||    
T  24988185 tcaatttaaatgaatgaatattgttt 24988160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 29804469 - 29804408
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||||| ||||||||||||||| |||| ||||||| ||| |||||  |||||| |||||    
T  29804469 cgttttatgctattaacatggatgtcgtgagtttgttcacagattcatcatttttgttttta 29804408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 33095829 - 33095784
Alignment:
Q  136 gtattctatcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    ||||| |||| | |||||||||| ||||||||||||||||||||||    
T  33095829 gtattttatcgatttgaatgaatgaatatcgtttatttttgtaaaa 33095784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 84
Target Start/End: Complemental strand, 34594312 - 34594275
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttc 84  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  34594312 cgttttatgctattaacatggatgttgtgagtttgttc 34594275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 34893518 - 34893559
Alignment:
Q  140 tctatcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||||||| |||||||||| |||||| |||||||||||||||    
T  34893518 tctatcaatttgaatgaatgaatatcatttatttttgtaaaa 34893559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 35544850 - 35544809
Alignment:
Q  140 tctatcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||||||| |||||||||| ||||| ||||||||||||||||    
T  35544850 tctatcaatttgaatgaataaatatagtttatttttgtaaaa 35544809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 38338944 - 38338879
Alignment:
Q  68 atgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcg 133  Q
    ||||||||| |||||||  |  ||||||||||||| ||||||||||||||||| | | ||||||||    
T  38338944 atgttgtgagtttgttcatatattcattctttttgtttttaacaactttgaatttatattgtatcg 38338879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 40993331 - 40993380
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttca 93  Q
    ||||||| |||||||||||| ||| |||||||| ||||||||||| ||||    
T  40993331 tgtcgttgtatgttattaacttgggtgttgtgagtttgttcgcagattca 40993380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 177
Target Start/End: Complemental strand, 48643515 - 48643478
Alignment:
Q  140 tctatcaacttgaatgaattaatatcgtttatttttgt 177  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  48643515 tctatcaatttgaatgaatgaatatcgtttatttttgt 48643478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 772764 - 772828
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||||||||||  ||||||||||||| ||||||  |||||||||  ||||| ||||||| |||||    
T  772764 tgtcgttttatactattaacatggatattgtgagcttgttcgcatattcatcctttttgttttta 772828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 174
Target Start/End: Original strand, 8180151 - 8180267
Alignment:
Q  59 ttaacatggat-gttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatgaa 157  Q
    ||||||||||| ||||||| ||||||| ||  |||||  |||||| ||||| | | |||| || ||| ||||||    ||| |||||||| |||||||||    
T  8180151 ttaacatggattgttgtgagtttgttcacatattcatcatttttgtttttagcgaatttggatttgtattgtatgaatgtactctatcaatttgaatgaa 8180250  T
Q  158 ttaatatcgtttatttt 174  Q
    | |||||||||||||||    
T  8180251 tgaatatcgtttatttt 8180267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 76
Target Start/End: Original strand, 43098898 - 43098930
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtga 76  Q
    ||||||||||||||||||||||| |||||||||    
T  43098898 tgtcgttttatgttattaacatgaatgttgtga 43098930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 46818315 - 46818271
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcag 88  Q
    ||||||| |||| ||||||| |||||||||||| |||||||||||    
T  46818315 tgtcgttatatgctattaacttggatgttgtgagtttgttcgcag 46818271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 179
Target Start/End: Original strand, 37612977 - 37613107
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaac 148  Q
    ||||||| |||||||||||||| ||||| ||||||| ||| ||||| ||||||| ||||||| | ||||||| ||| ||||||||   || ||||||||     
T  37612977 ttttatgctattaacatggatgatgtgagtttgttcacagattcatcctttttgtttttaacgaatttgaatttgtattgtatcgatatactctatcaat 37613076  T
Q  149 ttgaatgaattaatatcgtttatttttgtaa 179  Q
    |||||||||| ||||||||||||||||||||    
T  37613077 ttgaatgaatgaatatcgtttatttttgtaa 37613107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 175
Target Start/End: Original strand, 2968854 - 2968982
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    |||||||||||||||| ||||||| | ||  ||||||| ||| ||||||||| | | ||||||| ||||||||||||| ||||||||  ||| |||||||    
T  2968854 cgttttatgttattaagatggatgatatgtgtttgttcacagattcattcttatcgtttttaacgactttgaatatgtattgtatcgatgtactctatca 2968953  T
Q  147 acttgaatgaattaatatcgtttattttt 175  Q
    | |||||||||| ||||||||||||||||    
T  2968954 atttgaatgaatgaatatcgtttattttt 2968982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 13575998 - 13575871
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    |||||||| |||||||||||||||||||| ||||||||||  ||||| ||||||| ||||| | |||||| |||||| ||||||||  ||| ||||||||    
T  13575998 gttttatgctattaacatggatgttgtgagtttgttcgcaaattcatcctttttgtttttagcgactttggatatgtattgtatcgatgtactctatcaa 13575899  T
Q  148 cttgaatgaattaatatcgtttattttt 175  Q
     || ||||||| |||||||| |||||||    
T  13575898 tttaaatgaatgaatatcgtctattttt 13575871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 43936970 - 43936836
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||| |||||   | ||||||| ||| ||||||||   || |||||||    
T  43936970 cgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagtgaatttgaatttgtattgtatcgatctactctatca 43936871  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | | |||||||| ||||||||||||||||||||||    
T  43936870 attcgaatgaataaatatcgtttatttttgtaaaa 43936836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 13570562 - 13570427
Alignment:
Q  42 actgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattc 141  Q
    |||| ||||||||| |||||||||||||||||||| ||||||| ||  |||||  |||||| ||||||||| ||| ||| ||| ||||||||   || ||    
T  13570562 actgccgttttatgctattaacatggatgttgtgagtttgttcacatattcatcttttttgtttttaacaaatttaaatttgtattgtatcgatatactc 13570463  T
Q  142 tatcaacttgaatgaattaatatcgtttatttttgt 177  Q
    |||||| || ||||||| ||||||||||||||||||    
T  13570462 tatcaatttaaatgaatgaatatcgtttatttttgt 13570427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 14600488 - 14600358
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| |||||||  || ||||| ||||||| ||||| | | ||| ||| ||| ||||||||  ||| ||||| |    
T  14600488 cgttttatgctattaacatggatgttgtgagtttgttcatagattcatcctttttgtttttagcgaatttaaatttgtattgtatcgatgtactctatta 14600389  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||||||||||    
T  14600388 atttgaatgaataaatatcgtttatttttgt 14600358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 24790956 - 24790830
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaac 148  Q
    ||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||  ||||| | | |||| || ||| ||||||||  ||| ||||||||     
T  24790956 ttttatgctattaacatggatgttgtgagtttgttcacagattcatccttttt--ttttagcgaatttggatttgtattgtatcgatgtactctatcaat 24790859  T
Q  149 ttgaatgaattaatatcgtttatttttgt 177  Q
    |||||||||| ||||||||||||||||||    
T  24790858 ttgaatgaatgaatatcgtttatttttgt 24790830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 7579645 - 7579515
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||| || || ||| |||| || | | ||||||||  ||| |||||||    
T  7579645 cgttttatgctattaacatggatgttgtgagtttgttcacagtttcatcctttttgtttctagcaaatttggatttatattgtatcgatgtactctatca 7579546  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| |||||| |||| ||||||    
T  7579545 atttgaatgaatgaatatcatttagttttgt 7579515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 9501908 - 9502037
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    |||||||||||||||||||||||||||||| ||||||  ||| ||||  ||||||| ||||| | |  |||||| ||| ||||||||  ||| |||||||    
T  9501908 cgttttatgttattaacatggatgttgtgagtttgtttacagattca-gctttttgtttttagcgaacttgaatttgtattgtatcgatgtactctatca 9502006  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||| ||||||    
T  9502007 atttgaatgaatgaatatcgtttacttttgt 9502037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 186
Target Start/End: Original strand, 10148272 - 10148414
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| |||||||||||||| ||||| ||||||| ||| |||||  |||||| ||||| | | || | || ||| ||||||||  ||| ||||    
T  10148272 tgtcgttttatgctattaacatggatgatgtgagtttgttcacagattcatcatttttgtttttagcgaattaggatttgtattgtatcgatgtaatcta 10148371  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgtaaaacaaat 186  Q
    |||| |||||||||| ||||| |||||||||||| ||| ||||    
T  10148372 tcaatttgaatgaatgaatattgtttatttttgttaaaaaaat 10148414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 28296905 - 28296771
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||| ||||  ||||||| ||||| | | |||| || ||| ||||||||  ||| |||||||    
T  28296905 cgttttatgctattaacatggatgctgtgagtttgttcacagattcaacctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatca 28296806  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    | |||||||||| |||||| |||||||| ||||||    
T  28296805 atttgaatgaatgaatatcatttattttggtaaaa 28296771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 175
Target Start/End: Original strand, 4757487 - 4757615
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    |||||||||||||||||||||||||||||| ||||||| ||  ||||| ||||||| ||||| | | |||  || ||| |||||||   ||| |||||||    
T  4757487 cgttttatgttattaacatggatgttgtgagtttgttcacatattcatcctttttgtttttagcgaatttagatttgtattgtatcaatgtactctatca 4757586  T
Q  147 acttgaatgaattaatatcgtttattttt 175  Q
    | |||||||||| ||||||||||| ||||    
T  4757587 atttgaatgaatgaatatcgtttagtttt 4757615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 2025014 - 2024884
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| |||||  |||||| ||||| | | |||| || ||| || |||||  ||| |||||||    
T  2025014 cgttttatgctattaacatggatgttgtgagtttgttcacagattcatcatttttgtttttagcgaatttggatttgtattatatcgatgtactctatca 2024915  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||| ||||| ||||||    
T  2024914 atttgaatgaatgaatattgtttacttttgt 2024884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 177
Target Start/End: Complemental strand, 2234263 - 2234130
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| |||||| ||||||| ||||| ||| ||| ||   |||| ||||||| ||||| | | ||||||| ||| || |||||  ||| ||||    
T  2234263 tgtcgttttatgctattaatatggatgatgtgagtttattcacataatcatcctttttgtttttagcgaatttgaatttgtattatatcgatgtactcta 2234164  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgt 177  Q
    |||| |||||||||| ||||||||||||||||||    
T  2234163 tcaatttgaatgaatgaatatcgtttatttttgt 2234130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 181
Target Start/End: Original strand, 5526138 - 5526275
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| ||||||||| |||| || || ||||||| ||  ||||| ||||||  ||||| | | ||||||  | | ||||||||  ||| ||||    
T  5526138 tgtcgttttatgctattaacatagatgctgcgagtttgttcacatattcatcctttttatttttagcgaatttgaacttatattgtatcgatgtactcta 5526237  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  5526238 tcaatttgaatgaataaatatcgtttatttttgtaaaa 5526275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 177
Target Start/End: Original strand, 11162222 - 11162355
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||  ||||| ||||| | ||||| | | |||| || ||| ||||||||  ||| || |    
T  11162222 tgtcgttttatgctattaacatggatgttgtgagtttgttcccatattcatccttttcgtttttagcgaatttggatttgtattgtatcgatgtactcca 11162321  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgt 177  Q
    |||| |||||||||| |||||||| || ||||||    
T  11162322 tcaatttgaatgaatgaatatcgtatacttttgt 11162355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 12244009 - 12243952
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttttt 101  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  12244009 tgtcgttttatgttattaacatggatgttgtgagtttgttcgcagattcatccttttt 12243952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 181
Target Start/End: Complemental strand, 23970976 - 23970844
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||| ||||| |   ||||     || ||||||||  ||| ||||    
T  23970976 tgtcgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcggatttg-----gtattgtatcgatgtactcta 23970882  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||| ||||| ||||  |||||||||||||||||||||    
T  23970881 tcaatttgaacgaatgtatatcgtttatttttgtaaaa 23970844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 24700175 - 24700303
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    |||||||| |||||||||||||||||||| |||||||  || ||||| ||||||| ||||| | | ||||||| ||  ||||||||  ||| ||||| ||    
T  24700175 gttttatgctattaacatggatgttgtgagtttgttcatagattcatcctttttgtttttagcgaatttgaatttgaattgtatcgatgtactctatgaa 24700274  T
Q  148 cttgaatgaattaatatcgtttatttttgt 177  Q
     ||||||||| | |||||||||||||||||    
T  24700275 tttgaatgaa-tgatatcgtttatttttgt 24700303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 177
Target Start/End: Complemental strand, 30026671 - 30026542
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    |||||||| |||||||||||||  ||||| ||||||| ||| ||||| ||||||  ||||| | | ||||||| ||| |||||||    || ||||||||    
T  30026671 gttttatgctattaacatggatactgtgagtttgttcacagattcatcctttttatttttagcgaatttgaatttgtattgtatcaatatactctatcaa 30026572  T
Q  148 cttgaatgaattaatatcgtttatttttgt 177  Q
     |||||||||| ||||||||||||||||||    
T  30026571 tttgaatgaataaatatcgtttatttttgt 30026542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 177
Target Start/End: Original strand, 31202798 - 31202917
Alignment:
Q  57 tattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatga 156  Q
    |||||||||||||||||||| ||||||| ||| ||||| ||||| | ||||| | | |||| || ||| || |||||  ||| |||||||| ||||||||    
T  31202798 tattaacatggatgttgtgagtttgttcacagattcatcctttt-gtttttagcgaatttggatttgtattatatcgatgtactctatcaatttgaatga 31202896  T
Q  157 attaatatcgtttatttttgt 177  Q
    || ||||||||||||||||||    
T  31202897 atgaatatcgtttatttttgt 31202917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 171
Target Start/End: Complemental strand, 7256594 - 7256476
Alignment:
Q  52 tatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttg 151  Q
    |||||| |||| || |||||||||||||||||||||| |||||||||||| |||||| | ||||||||| ||| ||| |||   |||  | ||||| |||    
T  7256594 tatgttgttaatatagatgttgtgaatttgttcgcagattcattcttttt-gttttagcgactttgaatttgttttgcatcaatgtacacgatcaatttg 7256496  T
Q  152 aatgaattaatatcgtttat 171  Q
    ||||||| ||||||||||||    
T  7256495 aatgaataaatatcgtttat 7256476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 39067480 - 39067350
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||| | ||| ||||||| ||| ||||||||||||| ||||| | | ||| ||| ||| | ||||||   || |||||||    
T  39067480 cgttttatgctattaacatggatgctctgagtttgttcacagattcattctttttgtttttagcgaatttaaatttgtatagtatcgatatactctatca 39067381  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | || || |||| ||||||||||||||||||    
T  39067380 atttaaaagaatgaatatcgtttatttttgt 39067350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 18994203 - 18994260
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttttt 101  Q
    |||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||||    
T  18994203 tgtcgttttatgctattaacatggatgttgtgattttgttcgcagattcatccttttt 18994260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 186
Target Start/End: Original strand, 21471895 - 21472024
Alignment:
Q  57 tattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatga 156  Q
    ||||||||||||| || ||| ||||||||||| ||||| |||| || |||||  |||||||||| ||| |||||||    || ||||| |||||||||||    
T  21471895 tattaacatggatattctgagtttgttcgcagattcatcctttctgtttttagaaactttgaatttgtattgtatcaatatagtctataaacttgaatga 21471994  T
Q  157 attaatatcgtttatttttgtaaaacaaat 186  Q
    |  |||||| ||||||||| ||||| ||||    
T  21471995 aagaatatcttttatttttataaaaaaaat 21472024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 18190644 - 18190580
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||||||||||| |||||| ||||||||||||| ||||||| ||| ||||||||||||| |||||    
T  18190644 tgtcgttttatgctattaatatggatgttgtgagtttgttcacagattcattctttttgttttta 18190580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 181
Target Start/End: Complemental strand, 550802 - 550670
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttt-aacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    ||||||| |||||| |||||| || ||| |||| |||||  |||||||||||| ||||| ||| | ||||||  |||||| ||| |  ||||| ||||||    
T  550802 ttttatgatattaatatggat-ttatgagtttgctcgcaaattcattcttttttgtttttaacgattttgaaattgtgttatatggatgtattttatcaa 550704  T
Q  148 cttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    ||||||||||| | |||||||||| |||||||||    
T  550703 cttgaatgaataattatcgtttatgtttgtaaaa 550670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 10338621 - 10338548
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaat 120  Q
    ||||||||| |||||||||||||||||||| ||||||| ||  ||||| ||||||| ||||| ||| |||||||    
T  10338621 cgttttatgctattaacatggatgttgtgagtttgttcacatattcatcctttttgtttttagcaaatttgaat 10338548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 164
Target Start/End: Original strand, 4928253 - 4928369
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    |||||||  ||||||| ||||||| |||| |||||||| || |||||  |||||| ||||||| ||||||||| ||| || ||| |  ||| ||||||||    
T  4928253 gttttatactattaacttggatgtcgtgagtttgttcggagattcatcttttttgtttttaacgactttgaatttgtattatattgatgtactctatcaa 4928352  T
Q  148 cttgaatgaattaatat 164  Q
    ||||||| ||| |||||    
T  4928353 cttgaattaataaatat 4928369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 181
Target Start/End: Complemental strand, 10952096 - 10951953
Alignment:
Q  37 gatacactgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcg 136  Q
    ||||| ||||| ||||||| ||||| |||||||||||||| |||||| |||| |||||  |||||| ||||||| ||||| ||| | | || ||| |  |    
T  10952096 gatactctgtcattttatgctattatcatggatgttgtgagtttgtttgcagattcatcatttttgtttttaacgacttt-aatttattttatattgatg 10951998  T
Q  137 tattctatcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    || | |||||| |||||| ||| |||||  |||||||||||||||    
T  10951997 tactttatcaatttgaataaatgaatataatttatttttgtaaaa 10951953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 181
Target Start/End: Complemental strand, 10960101 - 10959958
Alignment:
Q  37 gatacactgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcg 136  Q
    ||||| ||||| ||||||| ||||| |||||||||||||| |||||| |||| |||||  |||||| ||||||| ||||| ||| | | || ||| |  |    
T  10960101 gatactctgtcattttatgctattatcatggatgttgtgagtttgtttgcagattcatcatttttgtttttaacgacttt-aatttattttatattgatg 10960003  T
Q  137 tattctatcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    || | |||||| |||||| ||| |||||  |||||||||||||||    
T  10960002 tactttatcaatttgaataaatgaatataatttatttttgtaaaa 10959958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 41996864 - 41996928
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||||||||||| |||||||||||||||||||| | ||||| ||| ||||| ||||||| |||||    
T  41996864 tgtcgttttatgctattaacatggatgttgtgagtctgttcacagattcatcctttttgttttta 41996928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 158
Target Start/End: Original strand, 23422149 - 23422258
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttt-aacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    ||||||| ||||||||||||| || ||| |||| |||||  |||||||||||| ||||| ||| | ||||||  |||||||||| |  ||||| ||||||    
T  23422149 ttttatgatattaacatggat-ttatgagtttgctcgcaaattcattcttttttgtttttaacgattttgaaattgtgttgtatggatgtattttatcaa 23422247  T
Q  148 cttgaatgaat 158  Q
    |||||||||||    
T  23422248 cttgaatgaat 23422258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 173
Target Start/End: Complemental strand, 26673572 - 26673446
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    |||||||||||||||||||||||| ||||| |||||||| || |||||  |||||| ||||| | | ||| ||| ||| | ||||||   || |||||||    
T  26673572 cgttttatgttattaacatggatgatgtgagtttgttcgtagattcatcttttttgtttttagctattttaaatttgtatcgtatcgatatactctatca 26673473  T
Q  147 acttgaatgaattaatatcgtttattt 173  Q
    | || |||||||  ||||| |||||||    
T  26673472 atttaaatgaatggatatcatttattt 26673446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 181
Target Start/End: Complemental strand, 35778891 - 35778761
Alignment:
Q  51 ttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaactt 150  Q
    ||||| || |||||| |||||||||||||||||||||  | ||| ||||| | ||||| | ||||||| | ||| || |||||  ||| | |||||  ||    
T  35778891 ttatgctaataacatagatgttgtgaatttgttcgcatatgcatccttttggtttttagctactttgagtttgtattatatcgatgtactttatcatttt 35778792  T
Q  151 gaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||||||| |||||| | |||||||||||||    
T  35778791 gaatgaatgaatatcatctatttttgtaaaa 35778761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 177
Target Start/End: Original strand, 2629324 - 2629361
Alignment:
Q  140 tctatcaacttgaatgaattaatatcgtttatttttgt 177  Q
    |||||||||||||||||||||||||| |||||||||||    
T  2629324 tctatcaacttgaatgaattaatatcatttatttttgt 2629361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 7280918 - 7280865
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttttt 101  Q
    |||||||| |||||||||||||||| ||| ||||||||||  ||||||||||||    
T  7280918 gttttatgatattaacatggatgttatgagtttgttcgcaaattcattcttttt 7280865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 31712866 - 31712805
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||||||||||||||||||||||| ||||| ||||||| ||  ||||| ||||||| |||||    
T  31712866 cgttttatgttattaacatggatgctgtgagtttgttcacatattcatcctttttgttttta 31712805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 175
Target Start/End: Original strand, 41362071 - 41362200
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattct-ttttggttttaacaactttgaatatgtgttgtatcggcgtattctatc 145  Q
    ||||||||| |||||||||||||||||||| |||||||  || ||||| || ||||  ||||| |     ||||| ||| |||||| |  ||| ||||||    
T  41362071 cgttttatgctattaacatggatgttgtgagtttgttcatagattcatcctcttttttttttagcgtaaatgaatttgtattgtattgatgtactctatc 41362170  T
Q  146 aacttgaatgaattaatatcgtttattttt 175  Q
    || |||||||||| ||||||||||||||||    
T  41362171 aatttgaatgaatgaatatcgtttattttt 41362200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 1215134 - 1215094
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttc 84  Q
    |||||||||||||||||||||| |||||||||| |||||||    
T  1215134 tgtcgttttatgttattaacattgatgttgtgagtttgttc 1215094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 5989934 - 5989998
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||||||||||| |||||||||| || |||||| ||||||||||| |||||  |||||| |||||    
T  5989934 tgtcgttttatgctattaacatgaatattgtgagtttgttcgcagattcatcatttttgttttta 5989998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 10043092 - 10043132
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttc 84  Q
    |||||||||||| |||||||||||||||||||| |||||||    
T  10043092 tgtcgttttatgctattaacatggatgttgtgagtttgttc 10043132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 12329963 - 12330027
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||||||||||| |||||||| ||||| ||||||||||||| ||| ||| | ||||||| |||||    
T  12329963 tgtcgttttatgctattaacacggatgctgtgaatttgttcccagattcttcctttttgttttta 12330027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 15665865 - 15665925
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttt 107  Q
    ||||||||| |||||||||||||||||||| |||||| |||| ||| | ||||||| ||||    
T  15665865 cgttttatgctattaacatggatgttgtgagtttgtttgcagattcgtcctttttgttttt 15665925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 108
Target Start/End: Complemental strand, 16938061 - 16938001
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||||||| |||||||||||||  ||||| ||||||||||| ||||| ||||||| |||||    
T  16938061 gttttatggtattaacatggattctgtgagtttgttcgcagattcatgctttttgttttta 16938001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 17019426 - 17019494
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttg 117  Q
    ||||||| |||||||||||||||||||| ||||||||||  ||||| ||||| | ||||| | ||||||    
T  17019426 ttttatgctattaacatggatgttgtgagtttgttcgcaaattcatccttttcgtttttagcgactttg 17019494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 17549863 - 17549931
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttg 117  Q
    ||||||| |||||||||||||||||||| ||||||||||  ||||| ||||| | ||||| | ||||||    
T  17549863 ttttatgctattaacatggatgttgtgagtttgttcgcaaattcatccttttcgtttttagcgactttg 17549931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 24210580 - 24210708
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||| |||||||||||  ||| ||||| ||||||| ||  ||||| ||||||| ||||| ||| ||||||| | | ||||||||  ||| |||||||    
T  24210580 cgttttaagttattaacatacatgctgtgagtttgttcacaaattcat-ctttttgtttttagcaaatttgaatttttattgtatcgatgtactctatca 24210678  T
Q  147 acttgaatgaattaatatcgtttatttttgtaaa 180  Q
    | ||||||||||    || |||||||||||||||    
T  24210679 atttgaatgaat----attgtttatttttgtaaa 24210708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 32062115 - 32062155
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttc 84  Q
    |||||||||||| |||||||||||||||||||| |||||||    
T  32062115 tgtcgttttatgctattaacatggatgttgtgagtttgttc 32062155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 32920965 - 32921029
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||||| || |||||||||||||||||||| |||||||  || ||||| ||||||| |||||    
T  32920965 tgtcgttttgtgctattaacatggatgttgtgagtttgttcagagattcatcctttttgttttta 32921029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 3925480 - 3925433
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcat 94  Q
    |||||||||||||||||||||||| ||||| ||||||| ||| |||||    
T  3925480 cgttttatgttattaacatggatgatgtgagtttgttcacagattcat 3925433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 8054515 - 8054464
Alignment:
Q  136 gtattctatcaacttgaatgaattaatatcgtttatttttgtaaaacaaatt 187  Q
    |||||||||||| |||||||||| |||||| ||||||||||| ||| |||||    
T  8054515 gtattctatcaatttgaatgaatgaatatcatttatttttgttaaaaaaatt 8054464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 87
Target Start/End: Complemental strand, 9799800 - 9799761
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgca 87  Q
    |||||||| |||||||||||||||||||| ||||||||||    
T  9799800 gttttatgctattaacatggatgttgtgagtttgttcgca 9799761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 99
Target Start/End: Original strand, 34611999 - 34612046
Alignment:
Q  52 tatgttattaacatggatgttgtgaatttgttcgcaggttcattcttt 99  Q
    |||| ||||||| |||||||||||| ||||||||||| ||||||||||    
T  34611999 tatgctattaacttggatgttgtgagtttgttcgcagattcattcttt 34612046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 109
Target Start/End: Complemental strand, 14530706 - 14530644
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaa 109  Q
    ||||||||| |||||||||||||||||||| |||| || ||| |||||  |||||| ||||||    
T  14530706 cgttttatgctattaacatggatgttgtgagtttgctcacagattcatcatttttgtttttaa 14530644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 94
Target Start/End: Complemental strand, 19443978 - 19443928
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcat 94  Q
    |||||||||||||||||||| | |||||||| ||||| |||||| ||||||    
T  19443978 tgtcgttttatgttattaacttagatgttgtaaatttcttcgcacgttcat 19443928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 22787830 - 22787884
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttg 102  Q
    |||||||| |||||||||||||| ||||| ||||||| ||| ||||| |||||||    
T  22787830 gttttatgctattaacatggatgctgtgagtttgttcacagattcatcctttttg 22787884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 187
Target Start/End: Original strand, 31308618 - 31308656
Alignment:
Q  149 ttgaatgaattaatatcgtttatttttgtaaaacaaatt 187  Q
    |||||||||| |||||||||||||||||||||| |||||    
T  31308618 ttgaatgaataaatatcgtttatttttgtaaaaaaaatt 31308656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 40490323 - 40490253
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttg 117  Q
    ||||||||  |||||||||||||||||||| ||||||| ||| |||||  |||||| ||||| ||| ||||    
T  40490323 cgttttatactattaacatggatgttgtgagtttgttcacagattcatcatttttgtttttagcaaatttg 40490253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 84
Target Start/End: Complemental strand, 3204576 - 3204539
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttc 84  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  3204576 cgttttatgttattaacatggatgatgtgagtttgttc 3204539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 10334908 - 10334949
Alignment:
Q  140 tctatcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    |||||||| ||||||||||  |||||||||||||||||||||    
T  10334908 tctatcaatttgaatgaatggatatcgtttatttttgtaaaa 10334949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 12248501 - 12248440
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||||||||||||||||||||||| || || ||||||| ||  ||||| ||||||| |||||    
T  12248501 cgttttatgttattaacatggatgatgcgagtttgttcacatattcatcctttttgttttta 12248440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 16937128 - 16937075
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttttt 101  Q
    |||||||| |||||||||||||| ||||| ||||||| ||| ||||| ||||||    
T  16937128 gttttatgctattaacatggatgatgtgagtttgttcacagattcatccttttt 16937075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 32256511 - 32256458
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttt 100  Q
    |||||||||||||||| ||||||| ||||| ||||||| ||| ||||| |||||    
T  32256511 cgttttatgttattaatatggatgatgtgagtttgttcacagattcatcctttt 32256458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 1809949 - 1809901
Alignment:
Q  126 ttgtatcggcgtattctatcaacttgaatgaattaatatcgtttatttt 174  Q
    ||||||||  ||| |||||||| |||||||||| |||||||||||||||    
T  1809949 ttgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttt 1809901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 1810009 - 1809957
Alignment:
Q  50 tttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttg 102  Q
    |||||| ||||||| |||||||||||| ||||||| ||| ||||| |||||||    
T  1810009 tttatgctattaacttggatgttgtgagtttgttcacagattcatcctttttg 1809957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 133
Target Start/End: Original strand, 4429387 - 4429471
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcg 133  Q
    ||||||||| |||||||||||| | ||| ||| ||||||| ||||| |||||||  |||| | ||||||||| |||  |||||||    
T  4429387 ttttatgtttttaacatggatgatatgagtttcttcgcagattcatcctttttgtatttagcgactttgaatttgtaatgtatcg 4429471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 11298551 - 11298515
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttc 84  Q
    |||||||| |||||||||||||||||||| |||||||    
T  11298551 gttttatgctattaacatggatgttgtgagtttgttc 11298515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 16794481 - 16794533
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattcttt 99  Q
    |||| |||| ||||||| |||||||||||| ||||||||||| ||||| ||||    
T  16794481 cgttatatggtattaacttggatgttgtgagtttgttcgcagattcatccttt 16794533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 76
Target Start/End: Original strand, 31874401 - 31874433
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtga 76  Q
    |||||||||||| ||||||||||||||||||||    
T  31874401 tgtcgttttatgctattaacatggatgttgtga 31874433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 76
Target Start/End: Complemental strand, 36545574 - 36545542
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtga 76  Q
    |||||||||||| ||||||||||||||||||||    
T  36545574 tgtcgttttatgctattaacatggatgttgtga 36545542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 3849 - 3719
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||| ||||| | | |||| || ||| ||||||||  ||| |||||||    
T  3849 cgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttaccgaatttggatttgtattgtatcgatgtactctatca 3750  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | |||||||||| ||||||||||| ||||||    
T  3749 atttgaatgaatgaatatcgtttacttttgt 3719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 35415 - 35544
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaa 147  Q
    |||||||| |||||||||||||||||||| ||||||| ||  || || ||||||| ||||| ||| |||| || ||| ||||||||  ||| ||||||||    
T  35415 gttttatgctattaacatggatgttgtgagtttgttcacaaatttatcctttttgtttttagcaaatttggatttgtattgtatcgatgtactctatcaa 35514  T
Q  148 cttgaatgaattaatatcgtttatttttgt 177  Q
     |||||||||| ||||||||||||||||||    
T  35515 tttgaatgaatgaatatcgtttatttttgt 35544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 177
Target Start/End: Original strand, 3209 - 3364
Alignment:
Q  22 tagtcatatttgtaggatacactgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaata 121  Q
    ||||||||||||||||  ||  || ||||||||| |||||||||||||| ||||| |||||||  || ||||| ||||||| ||||| | | ||| |||     
T  3209 tagtcatatttgtaggcaactttgccgttttatgctattaacatggatgatgtgagtttgttcatagattcatcctttttgtttttagcgaatttaaatt 3308  T
Q  122 tgtgttgtatcggcgtattctatcaacttgaatgaattaatatcgtttatttttgt 177  Q
    | | ||||||||  ||| |||||||| |||||||||| ||||||||||||||||||    
T  3309 tatattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 3364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 74503 - 74633
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatca 146  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||| ||||| | | |||| || ||| ||||||||  ||| |||||||    
T  74503 cgttttatgctattaacatggatgttgtgactttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatca 74602  T
Q  147 acttgaatgaattaatatcgtttatttttgt 177  Q
    | || ||| ||| ||||||||||||||||||    
T  74603 atttaaataaatgaatatcgtttatttttgt 74633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 6910 - 6781
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaac 148  Q
    ||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||||| ||||| | | ||||||| ||| ||||||||  ||| ||||||||     
T  6910 ttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtattgtatcgatgtactctatcaat 6811  T
Q  149 ttg-aatgaattaatatcgtttatttttgt 177  Q
    ||| ||||||| |||||||||||| |||||    
T  6810 ttgaaatgaatgaatatcgtttatatttgt 6781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 56 - 181
Target Start/End: Complemental strand, 404021 - 403896
Alignment:
Q  56 ttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattctatcaacttgaatg 155  Q
    ||||||||||||||| ||||| ||||||| ||| ||||| ||||||| ||| | | | ||||||| ||| ||||||||  ||| ||||| || |||||||    
T  404021 ttattaacatggatgctgtgagtttgttcacagattcatcctttttgttttcagcgaatttgaatttgtattgtatcgatgtactctattaatttgaatg 403922  T
Q  156 aattaatatcgtttatttttgtaaaa 181  Q
    ||| ||||||||||||||||||||||    
T  403921 aatgaatatcgtttatttttgtaaaa 403896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 35996 - 36056
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||||||||||||||||||||||||||||||||||| |||  ||||||||||||| |||||    
T  35996 gttttatgttattaacatggatgttgtgaatttgtttgcatattcattctttttgttttta 36056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0288 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 177
Target Start/End: Original strand, 20929 - 21062
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattcta 143  Q
    |||||||||||| |||||||||||||| ||||| ||||||   || ||||| ||||||| |||||   | |||| |  ||| ||| ||||  ||| ||||    
T  20929 tgtcgttttatgctattaacatggatgatgtgagtttgtttaaagattcatcctttttgtttttagtgaatttggaattgtattggatcgatgtactcta 21028  T
Q  144 tcaacttgaatgaattaatatcgtttatttttgt 177  Q
    |||| |||||||||| || |||||||||||||||    
T  21029 tcaatttgaatgaatgaaaatcgtttatttttgt 21062  T

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Target: scaffold0999 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0999
Description:

Target: scaffold0999; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 177
Target Start/End: Original strand, 2025 - 2160
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcgg--cgtattc 141  Q
    |||||||||||| |||| ||||||||| ||||| ||||||| ||  ||||| ||||||  ||||| | | |||| || ||| |||||| ||   ||| ||    
T  2025 tgtcgttttatgctattgacatggatgatgtgagtttgttcacaaattcatccttttttattttagcgaatttggatttgtattgtattggtatgtactc 2124  T
Q  142 tatcaacttgaatgaattaatatcgtttatttttgt 177  Q
    |||||| |||| ||||| ||||||||||||||||||    
T  2125 tatcaatttgagtgaatgaatatcgtttatttttgt 2160  T

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Target: scaffold0886 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 108
Target Start/End: Complemental strand, 3537 - 3477
Alignment:
Q  48 gttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    |||||||| |||||||||||||||||||||||||||  ||  ||||||||||||| |||||    
T  3537 gttttatgatattaacatggatgttgtgaatttgttttcatattcattctttttgttttta 3477  T

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Target: scaffold0150 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 10117 - 10066
Alignment:
Q  49 ttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttt 100  Q
    ||||||| |||||||||||||||||||| ||||||||||  ||||| |||||    
T  10117 ttttatgctattaacatggatgttgtgagtttgttcgcaaattcatcctttt 10066  T

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Target: scaffold1379 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 863 - 726
Alignment:
Q  47 cgttttatgttattaaca----tggatgttgtgaatttgttcgcaggttcattctttttggttttaacaactttgaatatgtgttgtatcggcgtattct 142  Q
    ||||||||||||||||||    || ||||||||| ||||||| ||| |||||  || ||| ||||| | | ||||||| ||| || |||||  || ||||    
T  863 cgttttatgttattaacacagatgcatgttgtgagtttgttcacagtttcatcattcttgtttttagcgaatttgaatttgtattatatcgatgtgttct 764  T
Q  143 atcaacttgaatgaattaatatcgtttatttttgtaaaa 181  Q
    ||||| |||||| | | ||||| ||||||||||||||||    
T  763 atcaatttgaatta-tgaatattgtttatttttgtaaaa 726  T

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Target: scaffold0312 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 6472 - 6509
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtgaatttg 81  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  6472 tgtcgttttatgctattaacatggatgttgtgagtttg 6509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 13027 - 12966
Alignment:
Q  47 cgttttatgttattaacatggatgttgtgaatttgttcgcaggttcattctttttggtttta 108  Q
    ||||||||| ||||| |||||||||||||| ||||||| ||| |||||  |||||| |||||    
T  13027 cgttttatgctattatcatggatgttgtgagtttgttcacagattcatcttttttgttttta 12966  T

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Target: scaffold0042 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 76
Target Start/End: Complemental strand, 94106 - 94074
Alignment:
Q  44 tgtcgttttatgttattaacatggatgttgtga 76  Q
    |||| ||||||||||||||||||||||||||||    
T  94106 tgtcattttatgttattaacatggatgttgtga 94074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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