View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18412_low_19 (Length: 405)
Name: NF18412_low_19
Description: NF18412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18412_low_19 |
 |  |
|
| [»] chr4 (5 HSPs) |
 |  |
|
| [»] chr5 (5 HSPs) |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 293; Significance: 1e-164; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 14 - 405
Target Start/End: Complemental strand, 47731991 - 47731596
Alignment:
| Q |
14 |
cagagataaaaatgaagtattgaaaaatgtagacaaaccaatacatatccattcaatccaaacagggctcttgaagtatctcaatctttgtctctcttaa |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
47731991 |
cagagataaaaatgaagtattgaaaaatgtagacaaaccaatacatatccactcaatccaaacagggctcttgaagtatctttatctttgtctctcttaa |
47731892 |
T |
 |
| Q |
114 |
ctgttttatctcttggattaaaacaacataagcataaaacctcattaggaaaccattgaggatgttgatacaatgaagagaatcggagtagcaaacaaaa |
213 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
47731891 |
ctgttttatgtcttggattaaaacaacataagcatgaaacctcattgggaaaccattgaggatgttgatacaatgaagagaatcagagtagcaaacaaaa |
47731792 |
T |
 |
| Q |
214 |
ttagtaatacccatttctttggccaacaggagacccttatagatgacataaagatcaacatacaagatatcaggtgaattttagatgt-----atcaaga |
308 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||| || |||||||||||| ||| || |
|
|
| T |
47731791 |
ttagtaatacccatttctttggccaacatgagacccttatagatgacataaagctcaacgtacaagatatcaagtaaattttagatgtatccaatccagt |
47731692 |
T |
 |
| Q |
309 |
aaagcctgataagtaaaaaacctgcatcatttcttaaaattcctccataaactgctcttataagagaactaaggcaatttccatcaacattacggat |
405 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||| |||||||||||||| |||| |
|
|
| T |
47731691 |
aaagcctgataag-aaaaaacctgcatcatttcttaaaattcctccataacctgctcttataggagatctaaggcaacttccatcaacattaaggat |
47731596 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 111 - 405
Target Start/End: Original strand, 26333912 - 26334205
Alignment:
| Q |
111 |
taactgttttatctcttggattaaaacaacataagcataaaacctcattaggaaaccattgaggatgttgatacaatgaagagaatcggagtagcaaaca |
210 |
Q |
| |
|
||||| |||||| ||||| ||||||||||||||||||| ||||||||| || ||||| |||||||||||| |||| | |||||| |||||| ||||| |
|
|
| T |
26333912 |
taactcttttatgtcttgaattaaaacaacataagcatgtaacctcattggggggccattaaggatgttgatataatgtaaagaatcagagtagaaaaca |
26334011 |
T |
 |
| Q |
211 |
aaattagtaatacccatttctttggccaacaggagacccttatagatgacataaagatcaacatacaagatatcaggtgaattttagatgtatcaagaaa |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||| || ||||||||||||| ||||||| |||||||||||||||||| |||||||| ||||| ||||| |
|
|
| T |
26334012 |
aaattagtaatacccatttctttggccaacaagatacccttatagatggcataaagcccaacatacaagatatcagatgaattttgaatgtacacagaaa |
26334111 |
T |
 |
| Q |
311 |
agcctgataagtaaaaaacctgcatcatttcttaaaattcctccataaactgctcttataagagaactaaggcaatttccatcaacattacggat |
405 |
Q |
| |
|
|| |||| ||| |||||||||||||||||||||||||||||||||||| | |||||||||||||| | ||||||| ||| ||||||||||||||| |
|
|
| T |
26334112 |
agtctgacaag-aaaaaacctgcatcatttcttaaaattcctccataaccagctcttataagagatccaaggcaacttcaatcaacattacggat |
26334205 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 117 - 400
Target Start/End: Original strand, 11376216 - 11376491
Alignment:
| Q |
117 |
ttttatctcttggattaaaacaa-cataagcataaaacctcattaggaaaccattgaggatgttgatacaatgaagagaatcggagtagcaaacaaaatt |
215 |
Q |
| |
|
|||||| |||||||||| ||||| ||||||||| ||||||||||| ||| ||||| |||||||||| | |||||| |||||||||||||||| |
|
|
| T |
11376216 |
ttttatgtcttggattagaacaaacataagcatgaaacctcatta--------ttggggatggtgatacaatgtaaagaatcagagtagcaaacaaaatc |
11376307 |
T |
 |
| Q |
216 |
agtaatacccatttctttggccaacaggagacccttatagatgacataaagatcaacatacaagatatcaggtgaattttagatgtatcaagaaaagcct |
315 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||| |||| || ||| ||||||||||||||| |||||||| ||||||| |||||||||| |
|
|
| T |
11376308 |
agtaatacccatttctttggccaacaaaagacccttatagatggcatagagctcagcatacaagatatcagatgaattttgaatgtatctagaaaagcct |
11376407 |
T |
 |
| Q |
316 |
gataagtaaaaaacctgcatcatttcttaaaattcctccataaactgctcttataagagaactaaggcaatttccatcaacatta |
400 |
Q |
| |
|
|| ||| ||||||||||||| |||||||||||||| ||||||| ||||||||||| |||| | ||||||| |||||||||||||| |
|
|
| T |
11376408 |
gacaag-aaaaaacctgcataatttcttaaaattcttccataacctgctcttataggagatccaaggcaacttccatcaacatta |
11376491 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 119 - 399
Target Start/End: Original strand, 50822894 - 50823171
Alignment:
| Q |
119 |
ttatctcttggattaaaacaacataagcataaaacctcattaggaaaccattgaggatgttgatacaatgaagagaatcggagtagcaaacaaaattagt |
218 |
Q |
| |
|
|||| ||||| ||||||||||||||||||| |||||||||| || ||||||||||||||||||||| || | ||| || |||||||||||||||| ||| |
|
|
| T |
50822894 |
ttatgtcttgaattaaaacaacataagcatgaaacctcattgggggaccattgaggatgttgatacagtgtaaagagtcagagtagcaaacaaaatcagt |
50822993 |
T |
 |
| Q |
219 |
aatacccatttctttggccaacaggagacccttatagatgacataaagatcaacatacaagatatcaggtgaattttagatgtatcaagaaaagcctgat |
318 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||||| ||||||| ||| |||||||| |||| |||||||| ||||||| |||||||||||| |
|
|
| T |
50822994 |
aatactcatttctttggccaacaagagacccttatagatggcataaagctcatcatacaag--atcaaatgaattttgaatgtatccagaaaagcctgac |
50823091 |
T |
 |
| Q |
319 |
aagtaaaaaacctgcatcatttcttaaaattcctccataaactgctcttataagagaactaaggcaatttccatcaacatt |
399 |
Q |
| |
|
|||| |||||||||||| ||| |||||||||||||||||| | ||||| || |||| | ||||||| ||||||||||||| |
|
|
| T |
50823092 |
aagt-aaaaacctgcataattccttaaaattcctccataaccaactcttctaggagatccaaggcaacttccatcaacatt |
50823171 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 349
Target Start/End: Complemental strand, 12271351 - 12271172
Alignment:
| Q |
169 |
ttgaggatgttgatacaatgaagagaatcggagtagcaaacaaaattagtaatacccatttctttggccaacaggagacccttatagatgacataaagat |
268 |
Q |
| |
|
|||| ||||||||||||||| | ||| || || || ||||| | || ||||||||||| ||||| | || || |||||| | ||||||| |||| | | |
|
|
| T |
12271351 |
ttgatgatgttgatacaatgtaaagagtctgaataacaaactaggttggtaatacccatgtctttagtcatcaagagaccatgatagatggcatataact |
12271252 |
T |
 |
| Q |
269 |
caacatacaagatatcaggtgaattttagatgtatcaagaaaagcctgataagtaaaaaacctgcatcatttcttaaaatt |
349 |
Q |
| |
|
|| ||||||| || |||| |||||| ||||| | |||||||||||| ||| || |||||||||||||||||||||||| |
|
|
| T |
12271251 |
cagcatacaaaatgtcagaagaatttggaatgtagccagaaaagcctgacaag-aagaaacctgcatcatttcttaaaatt |
12271172 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 151; Significance: 9e-80; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 111 - 405
Target Start/End: Original strand, 11052044 - 11052337
Alignment:
| Q |
111 |
taactgttttatctcttggattaaaacaacataagcataaaacctcattaggaaaccattgaggatgttgatacaatgaagagaatcggagtagcaaaca |
210 |
Q |
| |
|
||||| |||||| ||||| ||||| ||||||||| ||| ||||||| || || ||||||||||||||||||||||||| | |||||| |||||||||||| |
|
|
| T |
11052044 |
taactcttttatatcttgaattaatacaacataaacattaaacctcgttggggaaccattgaggatgttgatacaatgtaaagaatcagagtagcaaaca |
11052143 |
T |
 |
| Q |
211 |
aaattagtaatacccatttctttggccaacaggagacccttatagatgacataaagatcaacatacaagatatcaggtgaattttagatgtatcaagaaa |
310 |
Q |
| |
|
|||| ||||||||| |||||||||||||||| |||||||||||||||| |||| || ||||||||||||||||||| || ||||| ||||| | ||||| |
|
|
| T |
11052144 |
aaatcagtaatacctatttctttggccaacaagagacccttatagatggcatagagctcaacatacaagatatcagatggattttgaatgtacctagaaa |
11052243 |
T |
 |
| Q |
311 |
agcctgataagtaaaaaacctgcatcatttcttaaaattcctccataaactgctcttataagagaactaaggcaatttccatcaacattacggat |
405 |
Q |
| |
|
||||||| ||| |||||| |||||||||||| |||||||||||||||| | ||||||||| |||| | ||||||| |||||||||||||| |||| |
|
|
| T |
11052244 |
agcctgacaag-aaaaaatctgcatcatttcgtaaaattcctccataaccagctcttataggagatccaaggcaacttccatcaacattaaggat |
11052337 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 168 - 405
Target Start/End: Complemental strand, 24874147 - 24873911
Alignment:
| Q |
168 |
attgaggatgttgatacaatgaagagaatcggagtagcaaacaaaattagtaatacccatttctttggccaacaggagacccttatagatgacataaaga |
267 |
Q |
| |
|
||||| ||||||||||||||| | |||||| || ||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||| || |
|
|
| T |
24874147 |
attgaagatgttgatacaatgtaaagaatcagaatagcaaacaaaatcagtaatacccatttctttagccaacaagagacccttatagatgacatagagt |
24874048 |
T |
 |
| Q |
268 |
tcaacatacaagatatcaggtgaattttagatgtatcaagaaaagcctgataagtaaaaaacctgcatcatttcttaaaattcctccataaactgctctt |
367 |
Q |
| |
|
|| ||||||||||||||| |||||||| ||||||| | |||| ||||| ||| ||||||||||||| |||||||||||||||||||||| ||| || |
|
|
| T |
24874047 |
tcggcatacaagatatcagatgaattttgaatgtatccataaaatcctgacaag-aaaaaacctgcataatttcttaaaattcctccataactagctatt |
24873949 |
T |
 |
| Q |
368 |
ataagagaactaaggcaatttccatcaacattacggat |
405 |
Q |
| |
|
|| |||| | || |||| |||||||||||||| |||| |
|
|
| T |
24873948 |
gtaggagatccaatgcaacttccatcaacattaaggat |
24873911 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 111 - 358
Target Start/End: Complemental strand, 11106874 - 11106628
Alignment:
| Q |
111 |
taactgttttatctcttggattaaaacaacataagcataaaacctcattaggaaaccattgaggatgttgatacaatgaagagaatcggagtagcaaaca |
210 |
Q |
| |
|
||||| |||||| ||||| || |||||| ||||| ||| ||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||| |
|
|
| T |
11106874 |
taactcttttatatcttgaatcaaaacagcataaacatgaaacctcatgaggggaccattaaggatgttgatacaatgaagagaattagagtagcaaaat |
11106775 |
T |
 |
| Q |
211 |
aaattagtaatacccatttctttggccaacaggagacccttatagatgacataaagatcaacatacaagatatcaggtgaattttagatgtatcaagaaa |
310 |
Q |
| |
|
|||| || | ||||||| | |||||||| || || |||| ||| ||| ||||||| ||| || |||| |||| || ||||||| |||||| | ||| | |
|
|
| T |
11106774 |
aaatcagaattacccatgtttttggccagcaaaaggccctgatatatggcataaagttcagcaaacaaaatattagaagaattttggatgtaaccagaga |
11106675 |
T |
 |
| Q |
311 |
agcctgataagtaaaaaacctgcatcatttcttaaaattcctccataa |
358 |
Q |
| |
|
| || || |||| |||||| ||||| ||||||||||| |||||||||| |
|
|
| T |
11106674 |
aacccgacaagt-aaaaacttgcataatttcttaaaactcctccataa |
11106628 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 30987203 - 30987097
Alignment:
| Q |
117 |
ttttatctcttggattaaaacaacataagcataaaacctcattaggaaaccattgaggatgttgatacaatgaagagaatcggagtagcaaacaaaatta |
216 |
Q |
| |
|
|||||| ||||| || |||||||||||| ||| | ||||| | || | |||| ||||||||||||||||||||| |||| ||||||||||| |||| | |
|
|
| T |
30987203 |
ttttatatcttgaatcaaaacaacataaacatgatacctcctggggggatcattaaggatgttgatacaatgaagaaaatcagagtagcaaactaaatca |
30987104 |
T |
 |
| Q |
217 |
gtaatac |
223 |
Q |
| |
|
|||||| |
|
|
| T |
30987103 |
ttaatac |
30987097 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 254
Target Start/End: Original strand, 4913900 - 4913977
Alignment:
| Q |
177 |
gttgatacaatgaagagaatcggagtagcaaacaaaattagtaatacccatttctttggccaacaggagacccttata |
254 |
Q |
| |
|
|||||| ||| ||||||||| |||||||||||||||| | |||||||||||||| ||||| | |||||| ||||| |
|
|
| T |
4913900 |
gttgatgcaaagaagagaattcgagtagcaaacaaaatcatcgatacccatttctttagccaatatgagaccattata |
4913977 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 94; Significance: 9e-46; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 117 - 400
Target Start/End: Original strand, 9083023 - 9083304
Alignment:
| Q |
117 |
ttttatctcttggattaaaacaacataagcataaaacctcattaggaa-accattgaggatgttgatacaatgaagagaatcggagtagcaaacaaaatt |
215 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| || |||||||||||||||||||||||| | || ||| |||||||||||||||| |
|
|
| T |
9083023 |
ttttatatcttggattaaaacagaataagcatgaaacctcattggggggaccattgaggatgttgatacaatgtaaagcatcagagtagcaaacaaaatc |
9083122 |
T |
 |
| Q |
216 |
agtaatacccatttctttggccaacaggagacccttatagatgacataaagatcaacatacaagatatcaggtgaattttagatgtatcaagaaaagcct |
315 |
Q |
| |
|
| ||||||||| | ||||||||||| |||||| |||||||| |||| || ||| |||||||| ||||| |||||||| ||||||| |||||||||| |
|
|
| T |
9083123 |
aagaatacccatatatttggccaacaagagacctttatagatagcatagagctcatcatacaag--atcagatgaattttgaatgtatccagaaaagcct |
9083220 |
T |
 |
| Q |
316 |
gataagtaaaaaacctgcatcatttcttaaaattcctccataaactgctcttataagagaactaaggcaatttccatcaacatta |
400 |
Q |
| |
|
| ||| ||||||||||||| |||||||||||||||||||| | ||||||| |||| | ||| ||| |||||||||||||| |
|
|
| T |
9083221 |
aacaag-aaaaaacctgcatagtttcttaaaattcctccatagccagctcttactggagatccaagacaacttccatcaacatta |
9083304 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 69; Significance: 8e-31; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 111 - 263
Target Start/End: Original strand, 43706607 - 43706759
Alignment:
| Q |
111 |
taactgttttatctcttggattaaaacaacataagcataaaacctcattaggaaaccattgaggatgttgatacaatgaagagaatcggagtagcaaaca |
210 |
Q |
| |
|
||||| |||||| |||||||||||||| ||||| ||| |||||||||| || ||||| ||||||||||| |||||| | ||| || ||||| |||||| |
|
|
| T |
43706607 |
taactattttatgtcttggattaaaacggcataaacatgaaacctcattgggggaccatggaggatgttgagacaatgtaaagagtcagagtaacaaaca |
43706706 |
T |
 |
| Q |
211 |
aaattagtaatacccatttctttggccaacaggagacccttatagatgacata |
263 |
Q |
| |
|
|||| |||||| || |||||||||||||||| |||||||||||| |||||||| |
|
|
| T |
43706707 |
aaatcagtaatgcctatttctttggccaacaagagacccttatatatgacata |
43706759 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 405
Target Start/End: Original strand, 43708934 - 43709079
Alignment:
| Q |
259 |
acataaagatcaacatacaagatatcaggtgaattttagatgtatcaagaaaagcctgataagtaaaaaacctgcatcatttcttaaaattcctccataa |
358 |
Q |
| |
|
||||| || |||||||||||||||||| |||||||| ||||||| |||||| ||| | ||| |||||| ||||| |||||||||||||||||||||| |
|
|
| T |
43708934 |
acatagagctcaacatacaagatatcatttgaattttgaatgtatctagaaaatcctcacaag-aaaaaagatgcataatttcttaaaattcctccataa |
43709032 |
T |
 |
| Q |
359 |
actgctcttataagagaactaaggcaatttccatcaacattacggat |
405 |
Q |
| |
|
|| |||||||| |||| | || ||| |||||||||||||| |||| |
|
|
| T |
43709033 |
cctactcttataggagatccaatacaacttccatcaacattaaggat |
43709079 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 117 - 227
Target Start/End: Complemental strand, 12734595 - 12734486
Alignment:
| Q |
117 |
ttttatctcttggattaaaacaacataagcataaaacctcattaggaaaccattgaggatgttgatacaatgaagagaatcggagtagcaaacaaaatta |
216 |
Q |
| |
|
|||||| ||||| || |||||| ||||| ||| ||||||||| || | ||||| |||||||||||||||||||||||||| ||||||||||| |||| | |
|
|
| T |
12734595 |
ttttatatcttgaatcaaaacagcataaacatgaaacctcatggggga-ccattaaggatgttgatacaatgaagagaatcagagtagcaaactaaatca |
12734497 |
T |
 |
| Q |
217 |
gtaatacccat |
227 |
Q |
| |
|
| ||||||||| |
|
|
| T |
12734496 |
gaaatacccat |
12734486 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 169 - 357
Target Start/End: Complemental strand, 35532888 - 35532701
Alignment:
| Q |
169 |
ttgaggatgttgatacaatgaagagaatcggagtagcaaacaaaattagtaatacccatttctttggccaacaggagacccttatagatgacataaagat |
268 |
Q |
| |
|
|||| ||||||||||||||| | |||||||| || ||||| | || ||||||||||| |||| | || || ||||| | |||||||||||| | | |
|
|
| T |
35532888 |
ttgatgatgttgatacaatgtaaagaatcggcataacaaactaggttggtaatacccatgtcttcagtcagcaaaagaccatgatagatgacatataact |
35532789 |
T |
 |
| Q |
269 |
caacatacaagatatcaggtgaattttagatgtatcaagaaaagcctgataagtaaaaaacctgcatcatttcttaaaattcctccata |
357 |
Q |
| |
|
|||||||||| || |||| |||||| ||||||| |||||||||||| ||||| | | ||||||||||||||||||||||| ||||| |
|
|
| T |
35532788 |
caacatacaaaatgtcagaagaatttggaatgtatccagaaaagcctgacaagtagaca-cctgcatcatttcttaaaattccaccata |
35532701 |
T |
 |
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Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 17654871 - 17654961
Alignment:
| Q |
117 |
ttttatctcttggattaaaacaacataagcataaaacctcattaggaaaccattgaggatgttgatacaatgaagagaatcggagtagcaaa |
208 |
Q |
| |
|
|||||| ||||| || |||||| ||||| || |||||||||| |||| ||||| |||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
17654871 |
ttttatatcttgaatcaaaacagcataaagatgaaacctcatttggaa-ccattaaggatgttgatacaataaagagaatcagagtagcaaa |
17654961 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 197
Target Start/End: Original strand, 41430547 - 41430633
Alignment:
| Q |
111 |
taactgttttatctcttggattaaaacaacataagcataaaacctcattaggaaaccattgaggatgttgatacaatgaagagaatc |
197 |
Q |
| |
|
||||| |||||| ||||| || ||||| ||||| ||||||||||||| | |||||| | |||||||||||||||||||||||| |
|
|
| T |
41430547 |
taactcttttatatcttgaatcgaaacatcataaacataaaacctcatggagggaccattaaagatgttgatacaatgaagagaatc |
41430633 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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