View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18412_low_28 (Length: 339)
Name: NF18412_low_28
Description: NF18412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18412_low_28 |
 |  |
|
| [»] scaffold0785 (1 HSPs) |
 |  |  |
|
| [»] scaffold0012 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr4 (Bit Score: 260; Significance: 1e-145; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 13 - 323
Target Start/End: Original strand, 42901487 - 42901799
Alignment:
| Q |
13 |
cacagacatacttaacttctacacttgcttaattcttatttctctagtttcattccttcaccgcagacacatatacacaacttctcttgataataataat |
112 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
42901487 |
cacagacatacttagcttctacacctgcttaattcttatttctctagtttcattccttcaccgcagacacatatacacagcttctcttgataataataat |
42901586 |
T |
 |
| Q |
113 |
aa---gggtcttgttaacgagttatgctgaatttccaaggatgaaagagcatagagaaccatttgttgaatcatttcagaccgtgaagtgtcaccattga |
209 |
Q |
| |
|
|| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
42901587 |
aataagggtcttgttaacgagttatgctgaattcccaaggatgaa-gagcatagagaaccatttgttgaatcatttcagaccgtgaagtgttaccattga |
42901685 |
T |
 |
| Q |
210 |
ctgcactactaatggaagatgcatggtatcagggtctattgggtccatcgttgggcttgcatcgtccatgcttcaggtccgttgggaccggacagaagtg |
309 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |
|
|
| T |
42901686 |
ctacactactaatggaagatgcatggtatcagggtctattgggtccatcgttgggcttgcatcgtccatgcttcaggtccgttgggaccgggcagaagcg |
42901785 |
T |
 |
| Q |
310 |
tgagggggtgtgtt |
323 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
42901786 |
tgagggggtgtgtt |
42901799 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 323
Target Start/End: Complemental strand, 46529130 - 46529044
Alignment:
| Q |
236 |
tatcagggtctattgggtccatcgttgggcttgcatcgtccatgcttcaggtccgttgggaccggacagaagtgtgagggggtgtgtt |
323 |
Q |
| |
|
|||||| | |||| |||||||||||||||||||||||||||| |||||||| || ||||| |||| | |||| | ||||||||||||| |
|
|
| T |
46529130 |
tatcagagcctatcgggtccatcgttgggcttgcatcgtccacgcttcaggcccattggg-ccgggctgaagcgcgagggggtgtgtt |
46529044 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 323
Target Start/End: Complemental strand, 52810842 - 52810746
Alignment:
| Q |
229 |
tgcatggtatcagggtctattgggtccatcgttgggctt---gcatcgtccatgcttcaggtccgttgggaccggacagaagtgtgagggggtgtgtt |
323 |
Q |
| |
|
||||||||||||| | |||| |||||||||||||||||| ||||||||| |||||||| || ||||| |||| | |||| ||||||||||||||| |
|
|
| T |
52810842 |
tgcatggtatcagagcctatcgggtccatcgttgggcttccgacatcgtccacgcttcaggcccattggg-ccgggctgaagcgtgagggggtgtgtt |
52810746 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 231 - 323
Target Start/End: Original strand, 946780 - 946872
Alignment:
| Q |
231 |
catggtatcagggtctattgggtccatcgttgggcttgcatcgtccatgcttcaggtccgttgggaccggacagaagtgtgagggggtgtgtt |
323 |
Q |
| |
|
||||||||||| | |||| |||||||||||||||||||||||||||| |||||||| |||||||||||| | |||| |||||||||||||| |
|
|
| T |
946780 |
catggtatcagagcctatcgggtccatcgttgggcttgcatcgtccacgcttcaggctcgttgggaccgggctgaagcatgagggggtgtgtt |
946872 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 231 - 323
Target Start/End: Original strand, 30329952 - 30330044
Alignment:
| Q |
231 |
catggtatcagggtctattgggtccatcgttgggcttgcatcgtccatgcttcaggtccgttgggaccggacagaagtgtgagggggtgtgtt |
323 |
Q |
| |
|
|||||||||| | |||| |||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
30329952 |
catggtatcaaagcctatcgggtccatcgttgggcttgcatcgtccacgcttcaggcccgttgggaccgcgatgaagtgtgagggggtgtgtt |
30330044 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 323
Target Start/End: Original strand, 33040362 - 33040452
Alignment:
| Q |
232 |
atggtatcagggtctattgggtccatcgttgggcttgcatcgtccatgcttcaggtccgttgggaccggacagaagtgtgagggggtgtgtt |
323 |
Q |
| |
|
|||||||| | | |||| || ||||||||||||||||||||||||| |||||||| || || || |||| | |||| |||||| |||||||| |
|
|
| T |
33040362 |
atggtatccgagcctatcggatccatcgttgggcttgcatcgtccacgcttcaggcccattcgg-ccgggctgaagcgtgaggaggtgtgtt |
33040452 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 84022 - 83959
Alignment:
| Q |
231 |
catggtatcagggtctattgggtccatcgttgggcttgcatcgtccatgcttcaggtccgttggg |
295 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||||||||| |||| |||||||| || ||||| |
|
|
| T |
84022 |
catggtatcagatcctatcgggtccatcgttgggcttgcatc-tccacgcttcaggcccattggg |
83959 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 231 - 321
Target Start/End: Original strand, 16193912 - 16194001
Alignment:
| Q |
231 |
catggtatcagggtctattgggtccatcgttgggcttgcatcgtccatgcttcaggtccgttgggaccggacagaagtgtgagggggtgtg |
321 |
Q |
| |
|
||||||||||| |||||| |||||||||||||||||||||| ||||| ||||||||||| || |||| || | |||| ||||||||||||| |
|
|
| T |
16193912 |
catggtatcagagtctatcgggtccatcgttgggcttgcatagtccacgcttcaggtccatt-ggacggggctgaagcgtgagggggtgtg |
16194001 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 25184119 - 25184203
Alignment:
| Q |
231 |
catggtatcagggtctattgggtccatcgttgggcttgcatcgtccatgcttcaggtccgttgggaccggacagaagtgtgaggggg |
317 |
Q |
| |
|
||||||||||| | |||| ||||||||||||||||||||||| |||| |||||||| || ||||| |||| | |||||||||||||| |
|
|
| T |
25184119 |
catggtatcagagcctatcgggtccatcgttgggcttgcatc-tccacgcttcaggcccattggg-ccgggctgaagtgtgaggggg |
25184203 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 295
Target Start/End: Original strand, 36495782 - 36495846
Alignment:
| Q |
231 |
catggtatcagggtctattgggtccatcgttgggcttgcatcgtccatgcttcaggtccgttggg |
295 |
Q |
| |
|
||||||||||| | |||| ||||||||||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
36495782 |
catggtatcagagcctatcgggtccatcgttgggcttgcatcgtccatgcttcaggcccattggg |
36495846 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 33909253 - 33909306
Alignment:
| Q |
231 |
catggtatcagggtctattgggtccatcgttgggcttgcatcgtccatgcttca |
284 |
Q |
| |
|
||||||||||| | |||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
33909253 |
catggtatcagagcctatcaggtccatcgttgggcttgcatcgtccacgcttca |
33909306 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 19843599 - 19843653
Alignment:
| Q |
231 |
catggtatcagggtctattgggtccatcgttgggcttgcatcgtccatgcttcag |
285 |
Q |
| |
|
||||||||||| | |||| ||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
19843599 |
catggtatcagagcctatcgggtccatcgtatggcttgcatcgtccacgcttcag |
19843653 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 36270685 - 36270591
Alignment:
| Q |
231 |
catggtatcagggtctattgggtccatcgttgggctt---gcatcgtccatgcttcaggtccgttgggaccggacagaagtgtgagggggtgtgtt |
323 |
Q |
| |
|
|||||||||| | |||| |||||||||||||||||| |||||||||| |||||||| || ||||| |||| | |||| ||||||| ||||||| |
|
|
| T |
36270685 |
catggtatcaaagcctatcgggtccatcgttgggcttcaagcatcgtccacgcttcaggcccattggg-ccgggctgaagcgtgagggtgtgtgtt |
36270591 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 37756153 - 37756060
Alignment:
| Q |
231 |
catggtatcagggtctattgggtccatcgttgggct---tgcatcgtccatgcttcaggtccgttgggaccggacagaagtgtgagggggtgtgtt |
323 |
Q |
| |
|
||||||||||| | |||| ||||||||||||||||| |||||| |||| |||||||| || ||||| |||| | |||| ||||||||||||||| |
|
|
| T |
37756153 |
catggtatcagagcctatcgggtccatcgttgggcttcctgcatc-tccacgcttcaggcccattggg-ccgggctgaagcgtgagggggtgtgtt |
37756060 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 10862046 - 10861955
Alignment:
| Q |
231 |
catggtatcagggtctattgggtccatcgttgggcttgcatcgtccatgcttcaggtccgttgggaccggacagaagtgtgagggggtgtgtt |
323 |
Q |
| |
|
||||||||||| | |||| |||||||||||||||||||||||||||| |||||||| || ||||| ||| | |||| ||||||||||||||| |
|
|
| T |
10862046 |
catggtatcagagcctatcgggtccatcgttgggcttgcatcgtccacgcttcaggcccattggg-tcgggctgaagcgtgagggggtgtgtt |
10861955 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 11350005 - 11349915
Alignment:
| Q |
231 |
catggtatcagggtctattgggtccatcgttgggcttgcatcgtccatgcttcaggtccgttgggaccggacagaagtgtgagggggtgtgtt |
323 |
Q |
| |
|
||||||||||| | |||||||||||||||||||||||||||| |||| |||||||| || ||||| | || | |||| ||||||||||||||| |
|
|
| T |
11350005 |
catggtatcagagcctattgggtccatcgttgggcttgcatc-tccacgcttcaggcccattggg-ctgggccgaagcgtgagggggtgtgtt |
11349915 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 295
Target Start/End: Complemental strand, 11350395 - 11350336
Alignment:
| Q |
235 |
gtatcagggtctattgggtccatcgttgggcttgcatcgtccatgcttcaggtccgttggg |
295 |
Q |
| |
|
||||||| | |||||||||||||||||||||||||||| |||| |||||||| || ||||| |
|
|
| T |
11350395 |
gtatcagagcctattgggtccatcgttgggcttgcatc-tccacgcttcaggcccattggg |
11350336 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 15962145 - 15962056
Alignment:
| Q |
231 |
catggtatcagggtctattgggtccatcgttgggcttgcatcgtccatgcttcaggtccgttgggaccggacagaagtgtgagggggtgtgtt |
323 |
Q |
| |
|
||||||||||| | |||| |||||||||||||||||| |||| |||| |||||||| || || ||||||| | |||| ||||||||||||||| |
|
|
| T |
15962145 |
catggtatcagagcctatcgggtccatcgttgggctt-catc-tccacgcttcaggcccatt-ggaccgggctgaagcgtgagggggtgtgtt |
15962056 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 28193563 - 28193499
Alignment:
| Q |
231 |
catggtatcagggtctattgggtccatcgttgggcttgcatcgtccatgcttcaggtccgttggg |
295 |
Q |
| |
|
||||||||||| | |||| |||| |||||||||||||||||||||| |||||||| || ||||| |
|
|
| T |
28193563 |
catggtatcagagcctatcaggtctatcgttgggcttgcatcgtccacgcttcaggcccattggg |
28193499 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 44; Significance: 5e-16; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 17543760 - 17543851
Alignment:
| Q |
18 |
acatacttaacttctacacttgcttaa-ttcttatttctctagtttcattccttcaccgcagacacatatacacaacttctcttgataataataa |
111 |
Q |
| |
|
||||||||| ||||||| ||| ||| | ||||||||||||||||||||||||||||||| || ||||||||||||| |||||| |||||||||| |
|
|
| T |
17543760 |
acatacttagcttctactcttcctttacttcttatttctctagtttcattccttcaccgtag--acatatacacaac-tctcttaataataataa |
17543851 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 10450636 - 10450546
Alignment:
| Q |
231 |
catggtatcagggtctattgggtccatcgttgggcttgcatcgtccatgcttcaggtccgttgggaccggacagaagtgtgagggggtgtgtt |
323 |
Q |
| |
|
||||||||||| | |||||||||||||||||||||||||||| |||| |||||||| || ||| | |||| | |||| ||||||||||||||| |
|
|
| T |
10450636 |
catggtatcagagcctattgggtccatcgttgggcttgcatc-tccacgcttcaggcccattgtg-ccgggctgaagcgtgagggggtgtgtt |
10450546 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 40770123 - 40770060
Alignment:
| Q |
231 |
catggtatcagggtctattgggtccatcgttgggcttgcatcgtccatgcttcaggtccgttggg |
295 |
Q |
| |
|
||||||||||| |||||| ||||||||||||||||||||||| |||| ||||||||||| ||||| |
|
|
| T |
40770123 |
catggtatcagagtctatcgggtccatcgttgggcttgcatc-tccacgcttcaggtccattggg |
40770060 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 16051523 - 16051456
Alignment:
| Q |
231 |
catggtatcagggtctattgggtccatcgttgggct---tgcatcgtccatgcttcaggtccgttggg |
295 |
Q |
| |
|
||||||||||| | |||||||||||||||||||||| |||||||||||||||||||| || ||||| |
|
|
| T |
16051523 |
catggtatcagagcctattgggtccatcgttgggcttcctgcatcgtccatgcttcaggcccattggg |
16051456 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 16060873 - 16060806
Alignment:
| Q |
231 |
catggtatcagggtctattgggtccatcgttggg---cttgcatcgtccatgcttcaggtccgttggg |
295 |
Q |
| |
|
||||||||||| | |||||||||||||| ||||| ||||||||||||| |||||||| || ||||| |
|
|
| T |
16060873 |
catggtatcagagcctattgggtccatctttgggcttcttgcatcgtccacgcttcaggcccattggg |
16060806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 322
Target Start/End: Complemental strand, 48511627 - 48511535
Alignment:
| Q |
231 |
catggtatcagggtctattgggtccatcgttgggct---tgcatcgtccatgcttcaggtccgttgggaccggacagaagtgtgagggggtgtgt |
322 |
Q |
| |
|
||||||||||| | |||| ||||||||||||||||| |||||| |||| |||||||| || ||||| |||| | |||| |||||||||||||| |
|
|
| T |
48511627 |
catggtatcagagcctatcgggtccatcgttgggcttcctgcatc-tccacgcttcaggcccattggg-ccgggctgaagcgtgagggggtgtgt |
48511535 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 323
Target Start/End: Original strand, 45858771 - 45858862
Alignment:
| Q |
231 |
catggtatcagggtctattgggtccatcgttgggcttgcatcgtccatgcttcaggtccgttgggaccggacagaagtgtgagggggtgtgtt |
323 |
Q |
| |
|
||||||||||| | |||| |||||||||||||||||||||||||||| | |||||| || ||||| |||| | |||| ||||| ||||||||| |
|
|
| T |
45858771 |
catggtatcagagcctatcgggtccatcgttgggcttgcatcgtccacgtttcaggcccattggg-ccgggctgaagcgtgagagggtgtgtt |
45858862 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 131
Target Start/End: Original strand, 40376997 - 40377026
Alignment:
| Q |
102 |
ataataataataagggtcttgttaacgagt |
131 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
40376997 |
ataataataataagggtcttgttaacgagt |
40377026 |
T |
 |
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Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 31411537 - 31411505
Alignment:
| Q |
250 |
gggtccatcgttgggcttgcatcgtccatgctt |
282 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| |
|
|
| T |
31411537 |
gggtccatcgttgggcttgcatcgtccacgctt |
31411505 |
T |
 |
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Target: scaffold0785 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0785
Description:
Target: scaffold0785; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 286
Target Start/End: Complemental strand, 3108 - 3053
Alignment:
| Q |
231 |
catggtatcagggtctattgggtccatcgttgggcttgcatcgtccatgcttcagg |
286 |
Q |
| |
|
||||||||||| |||||| ||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
3108 |
catggtatcagagtctatcgggtccatcgttgggcttgcaccgtccacgcttcagg |
3053 |
T |
 |
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Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 323
Target Start/End: Original strand, 165693 - 165767
Alignment:
| Q |
248 |
ttgggtccatcgttgggcttgcatcgtccatgcttcaggtccgttgggaccggacagaagtgtgagggggtgtgtt |
323 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||||||| || ||||| |||| | |||| ||||||||||||||| |
|
|
| T |
165693 |
ttgggtccatcgttgggtttgcatcgtccacacttcaggcccattggg-ccgggctgaagcgtgagggggtgtgtt |
165767 |
T |
 |
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Target: chr8 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 233 - 323
Target Start/End: Original strand, 8605381 - 8605473
Alignment:
| Q |
233 |
tggtatcagggtctattgggtccatcgttgggct---tgcatcgtccatgcttcaggtccgttgggaccggacagaagtgtgagggggtgtgtt |
323 |
Q |
| |
|
|||||||||| |||| ||||||||||||||||| ||||||||||| | |||||| || ||||| |||| | |||| ||||||||||||||| |
|
|
| T |
8605381 |
tggtatcaggacctatcgggtccatcgttgggcttcctgcatcgtccacgattcaggcccattggg-ccgggctgaagcgtgagggggtgtgtt |
8605473 |
T |
 |
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Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 38287952 - 38287858
Alignment:
| Q |
231 |
catggtatcagggtctattgggtccatcgttgggct---tgcatcgtccatgcttcaggtccgttgggaccggacagaagtgtgagggggtgtgtt |
323 |
Q |
| |
|
|||| |||||| | |||||||||||||||||||||| | ||||||||| |||||||| || || ||| ||| | |||| ||||||||||||||| |
|
|
| T |
38287952 |
catgatatcagagcctattgggtccatcgttgggctttctacatcgtccacgcttcaggcccatt-ggatcgggctgaagcgtgagggggtgtgtt |
38287858 |
T |
 |
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