View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18412_low_49 (Length: 254)
Name: NF18412_low_49
Description: NF18412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18412_low_49 |
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Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 18 - 247
Target Start/End: Complemental strand, 39675437 - 39675212
Alignment:
| Q |
18 |
ataccaactatttgaagctagcagttcaatgccgtaaaagcattggtgatagctagaaattgctagctgttacccttggttatttgctagattttaggga |
117 |
Q |
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| T |
39675437 |
ataccaactatttgaagctagcagttcaatgccgtaaaagcattggtgatag----aaattgctagctgttacccttggttatttgctagattttaggga |
39675342 |
T |
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| Q |
118 |
aattttcatctgaataaaagctagggatgttttggttttatgtcttgaccatgtagctattttgaattggtgatgatgtagcgttgtttagtgcaattgt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39675341 |
aattttcatctgaataaaagctagggatgttttggttttatgtcttgaccatgtagctattttgaattggtgatgatgtagcgttgtttagtgcaattgt |
39675242 |
T |
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| Q |
218 |
cgtgaaaaatttctgtttatgttgtctgtg |
247 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
39675241 |
cgtgaaaaatttctgtttatgttgtctgtg |
39675212 |
T |
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