View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18413_low_19 (Length: 240)
Name: NF18413_low_19
Description: NF18413
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18413_low_19 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 20 - 240
Target Start/End: Original strand, 10388953 - 10389173
Alignment:
| Q |
20 |
ctacgttatttccaatactagtacatttatttaacatatgtaatacttccttgtaggtcttttgatcccaagagttagctcaaaaacgcttcgtcaagca |
119 |
Q |
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| T |
10388953 |
ctacgttatttccaatactagtacatttatttaacatatttaatacttccttgtaggtcttttgatcccaagagttagctcaaaaacgcttcgtcaagca |
10389052 |
T |
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| Q |
120 |
gtggaaattgtaggatgtgttataactccacataatgtatttcttcattcagcattagtacaatcaagagacattgacatccgtaacaaaggccaagttc |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10389053 |
gtggaaattgtaggatgtgttataactccacataatgtgtttcttcattcagcattagtacaatcaagagacattgacatccgtaacaaaggccaagttc |
10389152 |
T |
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| Q |
220 |
aagaggctctaaattactact |
240 |
Q |
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||||||||||||||||||||| |
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| T |
10389153 |
aagaggctctaaattactact |
10389173 |
T |
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