View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18415_high_18 (Length: 356)
Name: NF18415_high_18
Description: NF18415
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18415_high_18 |
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Alignment Details
Target: chr7 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 23 - 331
Target Start/End: Original strand, 21482084 - 21482392
Alignment:
| Q |
23 |
atgaataagaagaataactcaccggtgttctctagcaaatacatcctgcttttgttgttaggccaatatctgatgctccaagaagaaataatcaaaagat |
122 |
Q |
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| T |
21482084 |
atgaataagaagaataactcaccggtgttctccagcaaatacatcctgcttttgttgttaggccaatatctgatgctccaagaagaaataatcaaaagat |
21482183 |
T |
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| Q |
123 |
aaaattttagtcgcaatgtatcatcatcataatttatgaacataaaaaacaaaatgatgaagttaaatttgtccatgaaaatttgcttacctataacgca |
222 |
Q |
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|||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21482184 |
aaaattttagtcccaatgtatcatcatcataatttataaacataaaaaacaaaatgatgaagttaaatttgtccatgaaaatttgcttacctataacgca |
21482283 |
T |
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| Q |
223 |
tattccaaactcgagaagttccaatgtcttccattgtaatcgaaattccatctctcgcctccaattctggcaaatgtgtttctgcctctttctgatgttt |
322 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21482284 |
tattccaaactcgagaagttccaatgtcttccattgtaatcgaaattccatctcttgcctccaattctggcaaatgtgtttctgcctctttctgatgttt |
21482383 |
T |
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| Q |
323 |
ttgcaataa |
331 |
Q |
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||||||||| |
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| T |
21482384 |
ttgcaataa |
21482392 |
T |
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