View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18415_low_17 (Length: 382)
Name: NF18415_low_17
Description: NF18415
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18415_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 98 - 375
Target Start/End: Complemental strand, 21482014 - 21481737
Alignment:
| Q |
98 |
gaaagctaatggtctccaagaaggagatttcatagtgatatattctgatgtgaagtgtggcaaatttgtaagagccttctcttataatgttttcttttac |
197 |
Q |
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| T |
21482014 |
gaaagctaatggactccaagaaggagatttcatagtgatatattctgatgtgaagtgtggcaaatttgtaagagccttctcttataatgttttcttttac |
21481915 |
T |
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| Q |
198 |
ttaattttcatggatttggatttcctagttcccggcgtaattgaatcgagatcaaaccaaagttttaaaaaaccagactaaactcatcccattcaactaa |
297 |
Q |
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| T |
21481914 |
ttaatgttcatggatttggatttcctagttcccggcgtaattgaatcgagatcaaaccaaagttttaaaaaaccagactaaactcatcccgttcaactca |
21481815 |
T |
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| Q |
298 |
ttgaattgtgaatcctcgggttaaaccgtggttggttcaaaccgattttcatattttacattctttttaatattcttc |
375 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21481814 |
ttgaattgtgaatcctcgggttaaaccgtggttggttcaaaccgattttcatattttacattctttttaatattcttc |
21481737 |
T |
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