View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18415_low_20 (Length: 358)
Name: NF18415_low_20
Description: NF18415
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18415_low_20 |
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Alignment Details
Target: chr3 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 173 - 344
Target Start/End: Original strand, 8826159 - 8826330
Alignment:
| Q |
173 |
atctttctgagcttttctagtgccttttgatataacttgatggtaagctttatcatcaacttcaaattgtggtatattttgacattcaaatcttcttgta |
272 |
Q |
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| T |
8826159 |
atctttctgagcttttctagtgccttttgatataacttgatggtaagctttatcatcaacttcaaattgtggtatattttgatattcaaatcttcttgta |
8826258 |
T |
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| Q |
273 |
atattttcagtggggcatgtgcatatttacctttgcttgtgttgtttacgtgtacctcaaggcacctaaccc |
344 |
Q |
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| T |
8826259 |
acattttcagtggggcatgtgcatatttacctttgcttgtgctattaacgtgtacctcaaggcacctaaccc |
8826330 |
T |
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