View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18415_low_31 (Length: 301)
Name: NF18415_low_31
Description: NF18415
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18415_low_31 |
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Alignment Details
Target: chr7 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 35 - 285
Target Start/End: Original strand, 2510027 - 2510264
Alignment:
| Q |
35 |
gtgaacacttgctaacttaaacatatttactattgtccgttgccacatttcaaaacaattttatcctgaaaaaacactgtcacaaaaaagagataatttg |
134 |
Q |
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| T |
2510027 |
gtgaacacttgctaacttaaacgtatttactattgtccgttgccacatttcaaaacaattttatcttgaaaaaacactgtcacaaaagagagataatttg |
2510126 |
T |
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| Q |
135 |
atcaatctcatcctcattgaaaggattgtcacattattattttgctgcaatgttaaagttggaaatgaaacttatagagaccaattccattaaacttcaa |
234 |
Q |
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| T |
2510127 |
atcaatctcatcctcattgagag------------ataattttgctgcaatgtt-aagttggaaatgaaacttatagagaccaattccattaaacttcaa |
2510213 |
T |
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| Q |
235 |
attataaatgattatagaaaaattgtcacagattaaataatattattttgt |
285 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2510214 |
attataaatgattatagaaaaattgtcacagattaaataatattattttgt |
2510264 |
T |
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