View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18415_low_41 (Length: 254)

Name: NF18415_low_41
Description: NF18415
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18415_low_41
NF18415_low_41
[»] chr2 (6 HSPs)
chr2 (20-238)||(29801738-29801958)
chr2 (51-158)||(15729875-15729981)
chr2 (89-242)||(34576802-34576967)
chr2 (54-173)||(31488962-31489081)
chr2 (54-220)||(31486678-31486843)
chr2 (51-107)||(34576919-34576975)
[»] chr3 (1 HSPs)
chr3 (48-225)||(18966330-18966521)
[»] chr5 (8 HSPs)
chr5 (51-232)||(1779663-1779851)
chr5 (89-232)||(1779429-1779579)
chr5 (54-173)||(11852435-11852554)
chr5 (51-220)||(22600704-22600872)
chr5 (54-173)||(23164510-23164629)
chr5 (51-220)||(37207664-37207832)
chr5 (54-220)||(11850131-11850296)
chr5 (51-155)||(37207634-37207738)
[»] chr4 (6 HSPs)
chr4 (134-238)||(8739267-8739371)
chr4 (51-173)||(45166863-45166985)
chr4 (51-173)||(45161971-45162093)
chr4 (119-220)||(50855985-50856085)
chr4 (51-109)||(42468743-42468801)
chr4 (51-109)||(42471072-42471130)
[»] chr7 (14 HSPs)
chr7 (50-220)||(3932506-3932675)
chr7 (89-228)||(42678786-42678932)
chr7 (51-220)||(3934746-3934914)
chr7 (51-173)||(36464493-36464615)
chr7 (51-173)||(8414760-8414882)
chr7 (51-176)||(16497075-16497200)
chr7 (89-173)||(8733764-8733848)
chr7 (51-176)||(16535257-16535382)
chr7 (51-176)||(16630280-16630405)
chr7 (52-173)||(3051993-3052118)
chr7 (50-109)||(8733798-8733857)
chr7 (51-109)||(16497172-16497230)
chr7 (51-107)||(42678884-42678940)
chr7 (127-220)||(19788937-19789029)
[»] chr1 (6 HSPs)
chr1 (51-220)||(29833299-29833467)
chr1 (89-232)||(8933761-8933911)
chr1 (51-220)||(734802-734970)
chr1 (98-169)||(419213-419284)
chr1 (51-220)||(2404051-2404219)
chr1 (175-232)||(18353725-18353782)
[»] chr8 (7 HSPs)
chr8 (54-173)||(21268399-21268518)
chr8 (54-220)||(36377406-36377571)
chr8 (54-220)||(36379691-36379856)
chr8 (51-155)||(21268447-21268551)
chr8 (51-109)||(4876814-4876872)
chr8 (51-109)||(4879142-4879200)
chr8 (51-109)||(24519458-24519516)
[»] chr6 (1 HSPs)
chr6 (119-231)||(21199149-21199268)
[»] scaffold0312 (1 HSPs)
scaffold0312 (98-169)||(11287-11358)
[»] scaffold0050 (2 HSPs)
scaffold0050 (177-232)||(29257-29312)
scaffold0050 (177-232)||(31570-31625)
[»] scaffold0008 (1 HSPs)
scaffold0008 (51-109)||(73069-73127)


Alignment Details
Target: chr2 (Bit Score: 165; Significance: 2e-88; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 20 - 238
Target Start/End: Original strand, 29801738 - 29801958
Alignment:
Q  20 ggttgaacttcattgccactattagatctattgatgaagaataatatggaagtccctggaataataaaaaa-taatatggaagtctctagaccaccaaat 118  Q
    |||||||||||||| |||||||||||||||||||||||   ||||||||||||| || ||||||||||||| ||||||||||||||||||| |||||||     
T  29801738 ggttgaacttcattaccactattagatctattgatgaa---taatatggaagtctctagaataataaaaaaataatatggaagtctctagaacaccaaag 29801834  T
Q  119 aataatagggaagtatctagaatactaaagaataataaggaatcta----ctagacactctaaaattaagcactggaaaaatcttaatgtttctaaatcc 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29801835 aataatagggaagtatctagaatactaaagaataataaggaatctagctactagacactctaaaattaagcactggaaaaatcttaatgtttctaaatcc 29801934  T
Q  215 ttctagtcatatgaactatagcat 238  Q
    ||||||||||||||||||||||||    
T  29801935 ttctagtcatatgaactatagcat 29801958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 158
Target Start/End: Original strand, 15729875 - 15729981
Alignment:
Q  51 tgatgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaa 150  Q
    ||||||||||||||||||| ||| || ||| |||||| |||||| |||||||||||||| ||  ||| |||| || |||||| |||||||||||||||||    
T  15729875 tgatgaagaataatatggatgtctctagaacaataaagaataatgtggaagtctctaga-cataaaagaatattaaggaagtctctagaatactaaagaa 15729973  T
Q  151 taataagg 158  Q
    ||||||||    
T  15729974 taataagg 15729981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 242
Target Start/End: Complemental strand, 34576967 - 34576802
Alignment:
Q  89 aataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaataataaggaatctactagacactc------------ta 176  Q
    |||||| |||||||||||||| ||| ||| ||||||| |||||| |||| |||||||||||||||  ||||| ||||| |||||||            ||    
T  34576967 aataatgtggaagtctctagaacactaaagaataatatggaagtctctaaaatactaaagaataacgaggaagctactggacactctactaaataaaata 34576868  T
Q  177 aaattaagcactggaaaaatcttaatgtttctaaatccttctagtcatatgaactatagcattcat 242  Q
    |||||| ||||| || |||||||||  |||||| |||||||||||||||||||||| || ||||||    
T  34576867 aaattacgcactagagaaatcttaacttttctagatccttctagtcatatgaactagagtattcat 34576802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 31488962 - 31489081
Alignment:
Q  54 tgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaataa 153  Q
    |||||||||||||||||| | || ||||| ||   |||||| |||||||||||| |  || ||| |||||||  ||||| ||||||||||||  ||||||    
T  31488962 tgaagaataatatggaagactctagaatactagggaataatgtggaagtctctaaaagactaaagaataatatagaagtctctagaatactagggaataa 31489061  T
Q  154 taaggaatctactagacact 173  Q
    ||||||| ||||||||||||    
T  31489062 taaggaagctactagacact 31489081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 220
Target Start/End: Original strand, 31486678 - 31486843
Alignment:
Q  54 tgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaataa 153  Q
    |||||||||||||||||| | || ||||| ||   |||||| |||||| |||||||  || | | |||||||  ||||| ||||||||||||  ||||||    
T  31486678 tgaagaataatatggaagactctagaatactagggaataatgtggaagcctctagaagactagagaataatatagaagtctctagaatactagggaataa 31486777  T
Q  154 taaggaatctactagacact-ctaaaattaagcactggaaaaatcttaatgtttctaaatccttctag 220  Q
    ||||||| |||||||||||| |||||  |||||||| |  || ||||||  |||||| ||||||||||    
T  31486778 taaggaagctactagacactactaaa--taagcactagggaagtcttaacttttctagatccttctag 31486843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 34576975 - 34576919
Alignment:
Q  51 tgatgaagaataatatggaagtccctggaataataaaaaataatatggaagtctcta 107  Q
    |||||||||||||| |||||||| || ||| | |||| |||||||||||||||||||    
T  34576975 tgatgaagaataatgtggaagtctctagaacactaaagaataatatggaagtctcta 34576919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 48 - 225
Target Start/End: Complemental strand, 18966521 - 18966330
Alignment:
Q  48 tattgatgaagaataatatggaagtccctg--gaataataaaaaataatatggaagtctctagaccaccaaataataatagggaagtatctagaatacta 145  Q
    |||||||||||||||||||||||||| ||   ||||| |||| |||||| |||||||||||||| ||||||| |||||||||||||| ||||||||||||    
T  18966521 tattgatgaagaataatatggaagtctctctagaatactaaagaataatgtggaagtctctagaacaccaaagaataatagggaagtctctagaatacta 18966422  T
Q  146 aagaataataaggaatctactagacactc------------taaaattaagcactggaaaaatcttaatgtttctaaatccttctagtcata 225  Q
     | |||||||||| | |||||||| ||||            |||||||||||||| | |||||||||||||||||| |||||||||||||||    
T  18966421 gataataataaggtagctactagatactctactaaatgaaataaaattaagcactaggaaaatcttaatgtttctagatccttctagtcata 18966330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 7e-30; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 51 - 232
Target Start/End: Complemental strand, 1779851 - 1779663
Alignment:
Q  51 tgatgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaa 150  Q
    |||||||||||||||||||||||| | ||||| |||| || ||| |||||||||| | | ||| ||| ||||||| |||||| |||||||||||||||||    
T  1779851 tgatgaagaataatatggaagtccttagaatactaaagaaaaatgtggaagtctccataacactaaagaataatatggaagtctctagaatactaaagaa 1779752  T
Q  151 taataaggaatctactagacactc-------taaaattaagcactggaaaaatcttaatgtttctaaatccttctagtcatatgaacta 232  Q
    ||||   ||| |||||||||| ||       |||||| |||| || |  ||||||||||||||||| ||||||||||||||||||||||    
T  1779751 taatgtcgaagctactagacattctactggataaaataaagcgctagggaaatcttaatgtttctagatccttctagtcatatgaacta 1779663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 1779579 - 1779429
Alignment:
Q  89 aataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaataataaggaatctactagacactc-------taaaatt 181  Q
    |||||||||||||| ||||||  || ||| |||||||  ||||| |||| |||||||  ||||||||||||| |||||||||||||       ||||||     
T  1779579 aataatatggaagtttctagaaaactaaagaataatatagaagtctctaaaatactatggaataataaggaagctactagacactccactaaataaaata 1779480  T
Q  182 aagcactggaaaaatcttaatgtttctaaatccttctagtcatatgaacta 232  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  1779479 aagcactagaaaaatcttaatgtttctagatccttctagtcatatgaacta 1779429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 11852554 - 11852435
Alignment:
Q  54 tgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaataa 153  Q
    |||||||||||||||||| | || ||||| ||  |||||||  |||||||||||||  || ||| |||||||  ||||| ||||||||||||  ||||||    
T  11852554 tgaagaataatatggaagactctagaatactatgaaataatgaggaagtctctagaagactaaagaataatatagaagtctctagaatactagggaataa 11852455  T
Q  154 taaggaatctactagacact 173  Q
    ||||||| ||||||||||||    
T  11852454 taaggaagctactagacact 11852435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 220
Target Start/End: Original strand, 22600704 - 22600872
Alignment:
Q  51 tgatgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaa 150  Q
    ||||||||||||||||||||| | || ||||| ||   |||||| ||||||||||||||  || |||||||||||  ||||| ||||||||||||  |||    
T  22600704 tgatgaagaataatatggaagactctagaatattagggaataatgtggaagtctctagaagactaaataataatatagaagtctctagaatactatggaa 22600803  T
Q  151 taataaggaatctactagacact-ctaaaattaagcactggaaaaatcttaatgtttctaaatccttctag 220  Q
    ||||||| || ||||| |||||| |||||  |||||||| |  || ||||||  |||||| ||||||||||    
T  22600804 taataagaaagctacttgacactactaaa--taagcactagggaagtcttaacttttctagatccttctag 22600872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 23164629 - 23164510
Alignment:
Q  54 tgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaataa 153  Q
    |||||||||||||||||| | || ||||| ||   |||||| ||||||||||||||  || ||| |||||||  ||||| ||||||||||||  ||||||    
T  23164629 tgaagaataatatggaagactctagaatactagggaataatgtggaagtctctagaagactaaagaataatatagaagtctctagaatactagggaataa 23164530  T
Q  154 taaggaatctactagacact 173  Q
    ||||||| ||||||||||||    
T  23164529 taaggaagctactagacact 23164510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 220
Target Start/End: Original strand, 37207664 - 37207832
Alignment:
Q  51 tgatgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaa 150  Q
    ||||||||||||||||||||| | || ||||| ||   |||||| ||||||||||||||  || ||| |||||||  ||||| | ||||||||||  |||    
T  37207664 tgatgaagaataatatggaagactctagaatactagggaataatgtggaagtctctagaagactaaagaataatatagaagtctgtagaatactagggaa 37207763  T
Q  151 taataaggaatctactagacact-ctaaaattaagcactggaaaaatcttaatgtttctaaatccttctag 220  Q
    |||||||||| |||||||||||| |||||  |||||||| |  || ||||||  |||||| ||||||||||    
T  37207764 taataaggaagctactagacactactaaa--taagcactagggaagtcttaacttttctagatccttctag 37207832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 220
Target Start/End: Complemental strand, 11850296 - 11850131
Alignment:
Q  54 tgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaataa 153  Q
    |||||||||||||||||| | || ||||| ||   |||||| ||||||||||||||  || ||| |||||||  ||||| |||| |||||||  ||||||    
T  11850296 tgaagaataatatggaagactcttgaatactatggaataatgtggaagtctctagaagactaaagaataatatagaagtctctaaaatactagggaataa 11850197  T
Q  154 taaggaatctactagacact-ctaaaattaagcactggaaaaatcttaatgtttctaaatccttctag 220  Q
    |||| || |||||||||||| |||||  |||||||| |  || ||||||  |||||| ||||||||||    
T  11850196 taagaaagctactagacactactaaa--taagcactagggaagtcttaaattttctagatccttctag 11850131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 155
Target Start/End: Original strand, 37207634 - 37207738
Alignment:
Q  51 tgatgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaa 150  Q
    ||||||||||||||||||||||| || |||| || || ||||||||||||| |||||||  || |   ||||||  |||||| ||||||| |||||||||    
T  37207634 tgatgaagaataatatggaagtctctagaatgatgaagaataatatggaagactctagaatactagggaataatgtggaagtctctagaagactaaagaa 37207733  T
Q  151 taata 155  Q
    |||||    
T  37207734 taata 37207738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 8739267 - 8739371
Alignment:
Q  134 tctagaatactaaagaataataaggaatctactagacactctaaaattaagcactggaaaaatcttaatgtttctaaatccttctagtcatatgaactat 233  Q
    ||||||||||||| ||||||||||||| |||||| |||| ||||||||| ||||| |  ||||||||||||||||| ||||||||||||||||||||||     
T  8739267 tctagaatactaatgaataataaggaagctactatacacactaaaattatgcactagggaaatcttaatgtttctagatccttctagtcatatgaactag 8739366  T
Q  234 agcat 238  Q
    |||||    
T  8739367 agcat 8739371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 173
Target Start/End: Original strand, 45166863 - 45166985
Alignment:
Q  51 tgatgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaa 150  Q
    ||||||||||||||||||||||| || ||||  | || |||||||||||||||||||||  || ||| |||||||  ||||| | ||||||||||  |||    
T  45166863 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagtctctagaagactaaagaataatatagaagtctttagaatactagggaa 45166962  T
Q  151 taataaggaatctactagacact 173  Q
    |||||||||| ||||||||||||    
T  45166963 taataaggaagctactagacact 45166985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 51 - 173
Target Start/End: Original strand, 45161971 - 45162093
Alignment:
Q  51 tgatgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaa 150  Q
    ||||||||||||||||||||||| || ||||  | || |||||||||||||||||||||  || ||| |||||||  ||||| | ||||||||||  |||    
T  45161971 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagtctctagaagactaaagaataatatagaagtctttagaatactagggaa 45162070  T
Q  151 taataaggaatctactagacact 173  Q
    ||||||| || ||||||||||||    
T  45162071 taataagaaagctactagacact 45162093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 220
Target Start/End: Complemental strand, 50856085 - 50855985
Alignment:
Q  119 aataatagggaagtatctagaatactaaagaataataaggaatctactagacact-ctaaaattaagcactggaaaaatcttaatgtttctaaatccttc 217  Q
    ||||||| |||||| ||||||||||||  ||||||||||||| |||||||||||| |||||  |||||||| |  || ||||||  |||||| |||||||    
T  50856085 aataatatggaagtctctagaatactatggaataataaggaagctactagacactactaaa--taagcactagggaagtcttaacttttctagatccttc 50855988  T
Q  218 tag 220  Q
    |||    
T  50855987 tag 50855985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 109
Target Start/End: Complemental strand, 42468801 - 42468743
Alignment:
Q  51 tgatgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctaga 109  Q
    ||||||||||||||||||||||| || ||||  | || ||||||||||||| |||||||    
T  42468801 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactctaga 42468743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 109
Target Start/End: Complemental strand, 42471130 - 42471072
Alignment:
Q  51 tgatgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctaga 109  Q
    ||||||||||||||||||||||| || ||||  | || ||||||||||||| |||||||    
T  42471130 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactctaga 42471072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 50 - 220
Target Start/End: Original strand, 3932506 - 3932675
Alignment:
Q  50 ttgatgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaaga 149  Q
    |||||||||||||||||||||||| || |||| || || |||||||||||||||||||||  || ||| ||||||| |||||  ||||||||||||  ||    
T  3932506 ttgatgaagaataatatggaagtctctagaatgatgaagaataatatggaagtctctagaagactaaagaataatatggaagactctagaatactaggga 3932605  T
Q  150 ataataaggaatctactagacact-ctaaaattaagcactggaaaaatcttaatgtttctaaatccttctag 220  Q
    ||||||||||| |||||||| ||| |||||  |||||||| |  || ||||||  |||||| ||||||||||    
T  3932606 ataataaggaagctactagatactactaaa--taagcactagggaagtcttaacttttctagatccttctag 3932675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 89 - 228
Target Start/End: Complemental strand, 42678932 - 42678786
Alignment:
Q  89 aataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaataataaggaatctactagacactc-------taaaatt 181  Q
    |||||||||||||| ||||||  || ||| ||||||| |||||| |||| |||||||  ||||||||||||| |||||||||||||       ||||||     
T  42678932 aataatatggaagtttctagaaaactaaagaataatatggaagtctctaaaatactatggaataataaggaagctactagacactctactaaataaaata 42678833  T
Q  182 aagcactggaaaaatcttaatgtttctaaatccttctagtcatatga 228  Q
    ||||||| | |||||||||||||||||| ||||||||||||||||||    
T  42678832 aagcactaggaaaatcttaatgtttctagatccttctagtcatatga 42678786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 220
Target Start/End: Original strand, 3934746 - 3934914
Alignment:
Q  51 tgatgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaa 150  Q
    ||||||||||||||||||||||| || |||| || || |||||||||||||||||||||  || ||| ||||||| |||||  ||||||||||||  |||    
T  3934746 tgatgaagaataatatggaagtctctagaatgatgaagaataatatggaagtctctagaagactaaagaataatatggaagactctagaatactagggaa 3934845  T
Q  151 taataaggaatctactagacact-ctaaaattaagcactggaaaaatcttaatgtttctaaatccttctag 220  Q
    |||||||||| |||||||| ||| |||||  |||||||| |  || ||||||  |||||| ||||||||||    
T  3934846 taataaggaagctactagatactactaaa--taagcactagggaagtcttaacttttctagatccttctag 3934914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 173
Target Start/End: Complemental strand, 36464615 - 36464493
Alignment:
Q  51 tgatgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaa 150  Q
    ||||||| ||||||||||||| | || ||||| || | |||||| |||||||||||||| ||| |||||||||||  ||||| ||||||||||||  |||    
T  36464615 tgatgaaaaataatatggaagactctagaatactagagaataatgtggaagtctctagaacactaaataataatatagaagtctctagaatactagggaa 36464516  T
Q  151 taataaggaatctactagacact 173  Q
    |||||||||| ||||||||||||    
T  36464515 taataaggaagctactagacact 36464493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 173
Target Start/End: Complemental strand, 8414882 - 8414760
Alignment:
Q  51 tgatgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaa 150  Q
    ||||||||||||||||||||| | || ||||| || | |||||| ||||||| |||||| ||| ||| |||||||  ||||| ||||||||||||  |||    
T  8414882 tgatgaagaataatatggaagactctagaatactagagaataatgtggaagtatctagaacactaaagaataatatagaagtctctagaatactagggaa 8414783  T
Q  151 taataaggaatctactagacact 173  Q
    |||||||||| ||||||||||||    
T  8414782 taataaggaaactactagacact 8414760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 176
Target Start/End: Complemental strand, 16497200 - 16497075
Alignment:
Q  51 tgatgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaa 150  Q
    |||| |||||||||||||||||| || |||| || || ||||||||||| | |||||||  |  ||| ||||||  |||||| ||||||||||||  |||    
T  16497200 tgatcaagaataatatggaagtctctagaatgatcaagaataatatggatgcctctagaataataaagaataatgtggaagtttctagaatactatggaa 16497101  T
Q  151 taataaggaatctactagacactcta 176  Q
    |||||||||| |||||||||||||||    
T  16497100 taataaggaagctactagacactcta 16497075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 173
Target Start/End: Complemental strand, 8733848 - 8733764
Alignment:
Q  89 aataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaataataaggaatctactagacact 173  Q
    ||||||||||||||||||||| ||| ||| |||||||  ||||| ||||||||||||  ||||||||||||| ||||||||||||    
T  8733848 aataatatggaagtctctagaacactaaagaataatatagaagtctctagaatactagggaataataaggaagctactagacact 8733764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 176
Target Start/End: Complemental strand, 16535382 - 16535257
Alignment:
Q  51 tgatgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaa 150  Q
    |||| ||||||||||||||||||  | |||| || || ||||||||||||| |||||||  |  ||| ||||||  |||||| ||||||||||||  |||    
T  16535382 tgatcaagaataatatggaagtctatagaatgatcaagaataatatggaagcctctagaataataaagaataatgtggaagtctctagaatactatggaa 16535283  T
Q  151 taataaggaatctactagacactcta 176  Q
    |||||| ||| |||||||||||||||    
T  16535282 taataaagaagctactagacactcta 16535257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 176
Target Start/End: Original strand, 16630280 - 16630405
Alignment:
Q  51 tgatgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaa 150  Q
    |||| ||||||||||||||||||  | |||| || || ||||||||||||| |||||||  |  ||| ||||||  |||||| ||||||||||||  |||    
T  16630280 tgatcaagaataatatggaagtctatagaatgatcaagaataatatggaagcctctagaataataaagaataatgtggaagtctctagaatactatggaa 16630379  T
Q  151 taataaggaatctactagacactcta 176  Q
    |||||| ||| |||||||||||||||    
T  16630380 taataaagaagctactagacactcta 16630405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 3051993 - 3052118
Alignment:
Q  52 gatgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctagaccaccaaataataatagggaagtatctagaatac----taaa 147  Q
    |||||||||||||||||||| | || ||||| || | |||||| | |||||||||| | ||| ||| |||||||  ||||| ||||||||||    |||     
T  3051993 gatgaagaataatatggaagactctagaatactagagaataatgtcgaagtctctataacactaaagaataatatagaagtctctagaatactagataat 3052092  T
Q  148 gaataataaggaatctactagacact 173  Q
     |||||||||||| ||||||||||||    
T  3052093 aaataataaggaagctactagacact 3052118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 109
Target Start/End: Complemental strand, 8733857 - 8733798
Alignment:
Q  50 ttgatgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctaga 109  Q
    |||||||||||||||||||||||| || ||| | |||| |||||||| ||||||||||||    
T  8733857 ttgatgaagaataatatggaagtctctagaacactaaagaataatatagaagtctctaga 8733798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 109
Target Start/End: Complemental strand, 16497230 - 16497172
Alignment:
Q  51 tgatgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctaga 109  Q
    |||| |||||||||||||||||| || |||| || || |||||||||||||||||||||    
T  16497230 tgatcaagaataatatggaagtctctagaatgatcaagaataatatggaagtctctaga 16497172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 42678940 - 42678884
Alignment:
Q  51 tgatgaagaataatatggaagtccctggaataataaaaaataatatggaagtctcta 107  Q
    ||||||||||||||||||||||  || ||| | |||| |||||||||||||||||||    
T  42678940 tgatgaagaataatatggaagtttctagaaaactaaagaataatatggaagtctcta 42678884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 19788937 - 19789029
Alignment:
Q  127 ggaagtatctagaatactaaagaataataaggaatctactagacact-ctaaaattaagcactggaaaaatcttaatgtttctaaatccttctag 220  Q
    |||||| ||||||||||||  ||||||||||||| |||||||||||| |||||  |||||||| |  || ||||||  |||||| ||||||||||    
T  19788937 ggaagtctctagaatactagggaataataaggaagctactagacactactaaa--taagcactagggaagtcttaacttttctagatccttctag 19789029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 220
Target Start/End: Complemental strand, 29833467 - 29833299
Alignment:
Q  51 tgatgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaa 150  Q
    ||||||||||||||||||||| | || ||||| || | |||||| |||||||||||||| ||| ||| |||||||  ||||| ||||||||||||  |||    
T  29833467 tgatgaagaataatatggaagactctagaatactagagaataatgtggaagtctctagaacactaaagaataatatagaagtctctagaatactagggaa 29833368  T
Q  151 taataaggaatctactagacact-ctaaaattaagcactggaaaaatcttaatgtttctaaatccttctag 220  Q
    |||||||||| |||||||||||| |||||  |||||||| |  || ||||||  |||||| ||||||||||    
T  29833367 taataaggaagctactagacactactaaa--taagcactagggaagtcttaacttttctagatccttctag 29833299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 8933911 - 8933761
Alignment:
Q  89 aataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaataataaggaatctactagacactcta-------aaatt 181  Q
    |||||||||||| | |||| |  || ||| || |||| |||||| |||| |||||||  ||||||||||||| ||| |||||||||||       ||||     
T  8933911 aataatatggaaatttctaaaaaactaaagaaaaatatggaagtctctaaaatactatggaataataaggaagctattagacactctactaaataaaata 8933812  T
Q  182 aagcactggaaaaatcttaatgtttctaaatccttctagtcatatgaacta 232  Q
    ||||||| | |||||||||||||||||| ||||||||||||||||||||||    
T  8933811 aagcactaggaaaatcttaatgtttctagatccttctagtcatatgaacta 8933761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 220
Target Start/End: Complemental strand, 734970 - 734802
Alignment:
Q  51 tgatgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaa 150  Q
    ||||||||||||||||||||| | || ||||| ||   |||||| ||||||||| ||||  || ||| |||||||  ||||| ||||||||||||  |||    
T  734970 tgatgaagaataatatggaagactctagaatactagggaataatgtggaagtctttagaagactaaagaataatatagaagtctctagaatactagggaa 734871  T
Q  151 taataaggaatctactagacact-ctaaaattaagcactggaaaaatcttaatgtttctaaatccttctag 220  Q
    ||| |||||| |||||||||||| |||||  |||||||| |  || ||||||  |||||| ||||||||||    
T  734870 taacaaggaagctactagacactactaaa--taagcactagggaagtcttaacttttctagatccttctag 734802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 419284 - 419213
Alignment:
Q  98 gaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaataataaggaatctactaga 169  Q
    |||||||||||| ||| ||| ||||||| |||||| |||| |||  ||||||||||||||||| ||||||||    
T  419284 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctactaga 419213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 220
Target Start/End: Complemental strand, 2404219 - 2404051
Alignment:
Q  51 tgatgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaa 150  Q
    ||||||||||||| || |||| | || | ||| || | |||||| ||||| ||||||||  || ||| |||||||  ||||| ||||||||||||  |||    
T  2404219 tgatgaagaataaaatagaagactctaggatactagagaataatgtggaaatctctagaagactaaagaataatatagaagtctctagaatactagggaa 2404120  T
Q  151 taataaggaatctactagacact-ctaaaattaagcactggaaaaatcttaatgtttctaaatccttctag 220  Q
    |||||||||| |||||||| ||| |||||  |||||||| |  || ||||||  |||||| ||||||||||    
T  2404119 taataaggaagctactagatactactaaa--taagcactagggaagtcttaacttttctagatccttctag 2404051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 18353725 - 18353782
Alignment:
Q  175 taaaattaagcactggaaaaatcttaatgtttctaaatccttctagtcatatgaacta 232  Q
    ||||||| |||||| | |||||||||   |||||| ||||||||||||||||||||||    
T  18353725 taaaattgagcactaggaaaatcttatcttttctagatccttctagtcatatgaacta 18353782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 21268518 - 21268399
Alignment:
Q  54 tgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaataa 153  Q
    |||||||||||||||||| | || ||||| || | |||||| |||||||||||||| ||| ||| |||||||  ||||| ||||||||||||  ||||||    
T  21268518 tgaagaataatatggaagactctagaatactagagaataatgtggaagtctctagaacactaaagaataatatagaagtctctagaatactagggaataa 21268419  T
Q  154 taaggaatctactagacact 173  Q
    ||||||| ||||||||||||    
T  21268418 taaggaagctactagacact 21268399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 220
Target Start/End: Complemental strand, 36377571 - 36377406
Alignment:
Q  54 tgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaataa 153  Q
    |||||||||||||||||| | || ||||| |||  |||||| ||||||||||||||  || ||| |||||||  ||||| ||||||||||||  ||||||    
T  36377571 tgaagaataatatggaagactctagaatactaaggaataatgtggaagtctctagaagactaaagaataatatagaagtctctagaatactagggaataa 36377472  T
Q  154 taaggaatctactagacact-ctaaaattaagcactggaaaaatcttaatgtttctaaatccttctag 220  Q
    ||||||| |||||||||||| |||||  |||||||| |  || ||||||  |||||| ||||||||||    
T  36377471 taaggaagctactagacactactaaa--taagcactagggaagtcttaacttttctagatccttctag 36377406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 220
Target Start/End: Complemental strand, 36379856 - 36379691
Alignment:
Q  54 tgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaataa 153  Q
    |||||||||||||||||| | || ||||| ||   |||||| ||||||||||||||  || ||| |||||||  ||||| ||||||||||||  ||||||    
T  36379856 tgaagaataatatggaagactctagaatactagggaataatgtggaagtctctagaagactaaagaataatatagaagtctctagaatactagggaataa 36379757  T
Q  154 taaggaatctactagacact-ctaaaattaagcactggaaaaatcttaatgtttctaaatccttctag 220  Q
    ||||||| |||||||||||| |||||  |||||||| |  || ||||||  |||||| ||||||||||    
T  36379756 taaggaagctactagacactactaaa--taagcactagggaagtcttaacttttctagatccttctag 36379691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 155
Target Start/End: Complemental strand, 21268551 - 21268447
Alignment:
Q  51 tgatgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaa 150  Q
    ||||||||||||||||||||||| || ||||  | || ||||||||||||| |||||||  || | | ||||||  |||||| ||||||| |||||||||    
T  21268551 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactctagaatactagagaataatgtggaagtctctagaacactaaagaa 21268452  T
Q  151 taata 155  Q
    |||||    
T  21268451 taata 21268447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 109
Target Start/End: Original strand, 4876814 - 4876872
Alignment:
Q  51 tgatgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctaga 109  Q
    ||||||||||||||||||||||| || ||||  | || ||||||||||||| |||||||    
T  4876814 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactctaga 4876872  T

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Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 109
Target Start/End: Original strand, 4879142 - 4879200
Alignment:
Q  51 tgatgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctaga 109  Q
    ||||||||||||||||||||||| || ||||  | || ||||||||||||| |||||||    
T  4879142 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactctaga 4879200  T

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Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 109
Target Start/End: Complemental strand, 24519516 - 24519458
Alignment:
Q  51 tgatgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctaga 109  Q
    ||||||||||||||||||||||| || ||||  | || ||||||||||||| |||||||    
T  24519516 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactctaga 24519458  T

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Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 231
Target Start/End: Original strand, 21199149 - 21199268
Alignment:
Q  119 aataatagggaagtatctagaatactaaagaataataaggaatctactagacactcta-------aaattaagcactggaaaaatcttaatgtttctaaa 211  Q
    ||||||| |||||| ||||||||||||  ||||||||||||| |||||| ||||||||       |||| ||||||| |  ||||||||||||||||| |    
T  21199149 aataatatggaagtctctagaatactatggaataataaggaagctactatacactctactaaataaaataaagcactagttaaatcttaatgtttctaga 21199248  T
Q  212 tccttctagtcatatgaact 231  Q
    ||||||||||||||||||||    
T  21199249 tccttctagtcatatgaact 21199268  T

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Target: scaffold0312 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 11287 - 11358
Alignment:
Q  98 gaagtctctagaccaccaaataataatagggaagtatctagaatactaaagaataataaggaatctactaga 169  Q
    |||||||||||| ||| ||| ||||||| |||||| |||| |||  ||||||||||||||||| ||||||||    
T  11287 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctactaga 11358  T

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Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 29257 - 29312
Alignment:
Q  177 aaattaagcactggaaaaatcttaatgtttctaaatccttctagtcatatgaacta 232  Q
    |||||||||||| |  ||||||||||||||||| ||||||||||||||||| ||||    
T  29257 aaattaagcactagggaaatcttaatgtttctagatccttctagtcatatgtacta 29312  T

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Target: scaffold0050; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 31570 - 31625
Alignment:
Q  177 aaattaagcactggaaaaatcttaatgtttctaaatccttctagtcatatgaacta 232  Q
    |||||||||||| |  ||||||||||||||||| ||||||||||||||||| ||||    
T  31570 aaattaagcactagggaaatcttaatgtttctagatccttctagtcatatgtacta 31625  T

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Target: scaffold0008 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 109
Target Start/End: Original strand, 73069 - 73127
Alignment:
Q  51 tgatgaagaataatatggaagtccctggaataataaaaaataatatggaagtctctaga 109  Q
    ||||||||||||||||||||||| || ||||  | || |||||||||||||||||||||    
T  73069 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagtctctaga 73127  T

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