View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18418_low_10 (Length: 283)
Name: NF18418_low_10
Description: NF18418
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18418_low_10 |
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Alignment Details
Target: chr1 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 13 - 232
Target Start/End: Complemental strand, 41607154 - 41606935
Alignment:
| Q |
13 |
atactagtattttatatatctatctccttgcctaggtttgaaaggatgtaatttatgcttttcccttacaaagtacttgagtcttttctactacttaaaa |
112 |
Q |
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| T |
41607154 |
atactagtattttatatatctatctccttgcctaggtttgaaaggatgtaatttatgcttttcccttacaaagtacttgagtcttttctactacttaaaa |
41607055 |
T |
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| Q |
113 |
atcatgtcctttcctctctcataatacattacctagctatagctacatagatgagtgagtctaacttttaagactagcggtagactcggatcctgtctcc |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41607054 |
atcatgtcctttcctctctcataatacattacctagctatagctacatagatgagtgagtctaacttttaagactagcggtagactcggatcctgtctcc |
41606955 |
T |
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| Q |
213 |
tttcatttcagtttcatacc |
232 |
Q |
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|||||||||||||||||||| |
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| T |
41606954 |
tttcatttcagtttcatacc |
41606935 |
T |
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