View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18418_low_15 (Length: 228)
Name: NF18418_low_15
Description: NF18418
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18418_low_15 |
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Alignment Details
Target: chr8 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 2 - 219
Target Start/End: Complemental strand, 30901736 - 30901518
Alignment:
| Q |
2 |
aaatttctctaaatccttcactctttatgttttaaaggatatcaatgaattatttgtcattttgatttctaacatgtgaggattcaaaccgtnnnnnnnn |
101 |
Q |
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| T |
30901736 |
aaatttctctaaatccttcactctttatgttttaaaggatatcaatgaattatttgtcattttgatttctaacatgtgaggattcaaaccgtaaaaaaaa |
30901637 |
T |
|
| Q |
102 |
-taaaattaaagcatgaaagaattaagatataaaaatgatacctacattattataatgacatcaaagtgnnnnnnncgttggggaaagttattcttttac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
30901636 |
ataaaattaaagcatgaaagaattaagatataaaaatgatacctacattattataatgacatcaaagtgtttttttcgttggggaaagttattcttttac |
30901537 |
T |
|
| Q |
201 |
taattattggtagtataat |
219 |
Q |
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||||||||| ||||||||| |
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| T |
30901536 |
taattattgatagtataat |
30901518 |
T |
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