View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1841_high_3 (Length: 615)

Name: NF1841_high_3
Description: NF1841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1841_high_3
NF1841_high_3
[»] chr1 (31 HSPs)
chr1 (336-570)||(15951187-15951421)
chr1 (257-296)||(19172587-19172626)
chr1 (257-296)||(25469098-25469137)
chr1 (257-296)||(34309242-34309281)
chr1 (257-296)||(46391878-46391917)
chr1 (257-295)||(4433859-4433897)
chr1 (257-295)||(13142679-13142717)
chr1 (257-295)||(24991972-24992010)
chr1 (257-295)||(47967864-47967902)
chr1 (257-295)||(49680813-49680851)
chr1 (258-295)||(17172675-17172712)
chr1 (257-296)||(7559211-7559250)
chr1 (257-296)||(11548801-11548840)
chr1 (257-296)||(13263528-13263567)
chr1 (257-296)||(25468511-25468550)
chr1 (257-296)||(27256724-27256763)
chr1 (257-296)||(30663359-30663398)
chr1 (257-296)||(30663988-30664027)
chr1 (260-295)||(30932810-30932845)
chr1 (257-296)||(34308474-34308513)
chr1 (257-295)||(4439218-4439256)
chr1 (257-295)||(10120785-10120823)
chr1 (257-295)||(10121564-10121602)
chr1 (257-295)||(11704820-11704858)
chr1 (257-295)||(13262835-13262873)
chr1 (257-295)||(17171933-17171971)
chr1 (257-295)||(24992756-24992794)
chr1 (183-244)||(32039130-32039192)
chr1 (257-295)||(37577657-37577695)
chr1 (257-293)||(45818025-45818061)
chr1 (221-253)||(46812174-46812206)
[»] chr4 (33 HSPs)
chr4 (19-253)||(16903428-16903662)
chr4 (169-253)||(42059360-42059444)
chr4 (257-296)||(20774192-20774231)
chr4 (257-296)||(30573721-30573760)
chr4 (257-296)||(53732437-53732476)
chr4 (257-295)||(2444375-2444413)
chr4 (257-295)||(19550289-19550327)
chr4 (257-295)||(47688491-47688529)
chr4 (257-295)||(53772810-53772848)
chr4 (257-293)||(52871303-52871339)
chr4 (257-293)||(55001452-55001488)
chr4 (257-296)||(8247698-8247737)
chr4 (257-296)||(8248532-8248571)
chr4 (257-296)||(8266197-8266236)
chr4 (257-296)||(16903680-16903719)
chr4 (257-296)||(19080387-19080426)
chr4 (257-296)||(24158832-24158871)
chr4 (261-296)||(31329733-31329768)
chr4 (257-296)||(47785811-47785850)
chr4 (257-296)||(53147873-53147912)
chr4 (257-292)||(55976172-55976207)
chr4 (257-295)||(599313-599351)
chr4 (257-295)||(3654527-3654565)
chr4 (257-287)||(16903655-16903685)
chr4 (257-295)||(24551698-24551736)
chr4 (257-295)||(24551935-24551973)
chr4 (257-295)||(26147044-26147082)
chr4 (257-295)||(42882693-42882731)
chr4 (257-287)||(53733743-53733773)
chr4 (257-295)||(53773598-53773636)
chr4 (257-295)||(55000690-55000728)
chr4 (257-295)||(55976967-55977005)
chr4 (257-294)||(8265365-8265402)
[»] chr6 (11 HSPs)
chr6 (21-253)||(5861919-5862151)
chr6 (257-296)||(10171277-10171316)
chr6 (257-296)||(26529524-26529563)
chr6 (257-295)||(8488471-8488509)
chr6 (257-296)||(19311838-19311877)
chr6 (257-296)||(19323778-19323817)
chr6 (257-296)||(33436285-33436324)
chr6 (257-295)||(10171977-10172015)
chr6 (257-287)||(19322993-19323023)
chr6 (257-295)||(26528825-26528863)
chr6 (259-295)||(12344896-12344932)
[»] scaffold0085 (2 HSPs)
scaffold0085 (30-251)||(15117-15338)
scaffold0085 (257-296)||(22082-22121)
[»] chr2 (24 HSPs)
chr2 (21-256)||(15774763-15774999)
chr2 (257-296)||(29719448-29719487)
chr2 (257-295)||(1297134-1297172)
chr2 (257-295)||(9275589-9275627)
chr2 (257-295)||(11750260-11750298)
chr2 (257-295)||(15902893-15902931)
chr2 (257-295)||(29513158-29513196)
chr2 (257-296)||(1296381-1296420)
chr2 (257-296)||(9276341-9276380)
chr2 (257-296)||(9540333-9540372)
chr2 (257-296)||(22560579-22560618)
chr2 (257-296)||(36237633-36237672)
chr2 (257-296)||(42459053-42459092)
chr2 (257-287)||(11007242-11007272)
chr2 (257-295)||(12725626-12725664)
chr2 (257-287)||(16692985-16693015)
chr2 (257-295)||(22301881-22301919)
chr2 (257-295)||(27177915-27177953)
chr2 (257-294)||(18820436-18820473)
chr2 (258-295)||(26589029-26589066)
chr2 (257-294)||(26752734-26752771)
chr2 (213-253)||(1296413-1296453)
chr2 (213-253)||(9276308-9276348)
chr2 (257-293)||(40252027-40252063)
[»] scaffold0002 (1 HSPs)
scaffold0002 (27-253)||(428696-428920)
[»] chr8 (16 HSPs)
chr8 (208-254)||(31603002-31603048)
chr8 (257-296)||(41974642-41974681)
chr8 (257-295)||(38576313-38576351)
chr8 (257-296)||(3165133-3165172)
chr8 (257-296)||(8372915-8372954)
chr8 (257-296)||(8373704-8373743)
chr8 (257-296)||(31641513-31641552)
chr8 (257-296)||(37732828-37732867)
chr8 (213-256)||(38575589-38575632)
chr8 (257-295)||(11686229-11686267)
chr8 (257-295)||(14825646-14825684)
chr8 (257-295)||(27441469-27441507)
chr8 (257-287)||(32414535-32414565)
chr8 (257-293)||(26654389-26654425)
chr8 (257-293)||(28929850-28929886)
chr8 (214-254)||(37734209-37734249)
[»] scaffold0176 (1 HSPs)
scaffold0176 (257-296)||(26593-26632)
[»] chr7 (34 HSPs)
chr7 (257-296)||(7668483-7668522)
chr7 (257-296)||(13785605-13785644)
chr7 (257-296)||(25599023-25599062)
chr7 (257-296)||(26636104-26636143)
chr7 (257-296)||(30661467-30661506)
chr7 (257-296)||(37949606-37949645)
chr7 (257-296)||(45099905-45099944)
chr7 (257-296)||(46428188-46428227)
chr7 (257-295)||(25342499-25342537)
chr7 (257-295)||(25343305-25343343)
chr7 (257-295)||(30660595-30660633)
chr7 (257-295)||(37950479-37950517)
chr7 (257-295)||(47719716-47719754)
chr7 (257-293)||(43065128-43065164)
chr7 (257-296)||(3903351-3903390)
chr7 (261-296)||(18977785-18977820)
chr7 (257-296)||(19067638-19067677)
chr7 (257-296)||(19068407-19068446)
chr7 (257-296)||(26636872-26636911)
chr7 (257-296)||(46428829-46428868)
chr7 (257-295)||(1417610-1417648)
chr7 (257-295)||(3029210-3029248)
chr7 (257-295)||(3772538-3772576)
chr7 (257-295)||(16664137-16664175)
chr7 (257-295)||(17638497-17638535)
chr7 (257-295)||(23901106-23901144)
chr7 (257-295)||(24389628-24389666)
chr7 (257-295)||(24719337-24719375)
chr7 (257-295)||(27948448-27948486)
chr7 (257-295)||(31278166-31278204)
chr7 (261-295)||(37395515-37395549)
chr7 (257-295)||(38225987-38226025)
chr7 (257-295)||(45161971-45162009)
chr7 (213-253)||(25343218-25343258)
[»] chr5 (22 HSPs)
chr5 (257-296)||(234702-234741)
chr5 (257-296)||(237832-237871)
chr5 (257-296)||(6476802-6476841)
chr5 (257-296)||(10554523-10554562)
chr5 (257-296)||(19128771-19128810)
chr5 (257-296)||(19359705-19359744)
chr5 (257-296)||(28705890-28705929)
chr5 (257-296)||(29046030-29046069)
chr5 (257-295)||(235594-235632)
chr5 (257-295)||(1281838-1281876)
chr5 (257-295)||(1283536-1283574)
chr5 (257-295)||(7632097-7632135)
chr5 (257-296)||(14478922-14478961)
chr5 (257-296)||(19360487-19360526)
chr5 (257-296)||(27364498-27364537)
chr5 (257-296)||(29087926-29087965)
chr5 (257-295)||(236940-236978)
chr5 (257-287)||(1283511-1283541)
chr5 (257-295)||(1554094-1554132)
chr5 (257-287)||(10554557-10554587)
chr5 (257-294)||(25858213-25858250)
chr5 (260-296)||(34709051-34709087)
[»] chr3 (19 HSPs)
chr3 (257-296)||(21727541-21727580)
chr3 (257-296)||(48648205-48648244)
chr3 (257-295)||(17603171-17603209)
chr3 (257-293)||(265110-265146)
chr3 (257-296)||(14871155-14871194)
chr3 (257-296)||(37988230-37988269)
chr3 (257-296)||(46150741-46150780)
chr3 (257-296)||(48649185-48649224)
chr3 (257-296)||(48765082-48765121)
chr3 (257-296)||(55373718-55373757)
chr3 (257-295)||(17603973-17604011)
chr3 (257-287)||(17605717-17605747)
chr3 (257-295)||(31974654-31974692)
chr3 (257-287)||(48413330-48413360)
chr3 (221-269)||(29853960-29854009)
chr3 (257-286)||(44699832-44699861)
chr3 (257-294)||(46149633-46149670)
chr3 (257-293)||(37987238-37987274)
chr3 (257-293)||(40872820-40872856)
[»] scaffold2007 (1 HSPs)
scaffold2007 (257-296)||(752-791)
[»] scaffold0504 (1 HSPs)
scaffold0504 (257-296)||(5391-5430)
[»] scaffold0096 (1 HSPs)
scaffold0096 (257-292)||(39901-39936)
[»] scaffold0093 (1 HSPs)
scaffold0093 (257-295)||(23740-23778)
[»] scaffold0012 (1 HSPs)
scaffold0012 (257-287)||(181020-181050)


Alignment Details
Target: chr1 (Bit Score: 223; Significance: 1e-122; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 336 - 570
Target Start/End: Complemental strand, 15951421 - 15951187
Alignment:
Q  336 tgcgatttagtgacagaaattagcaaatgaactaaaatgaaacctgggataagaccacgataaattcttcttctaaagttgtcaagcaaattatactttc 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15951421 tgcgatttagtgacagaaattagcaaatgaactaaaatgaaacctgggataagaccacgataaattcttcttctaaagttgtccagcaaattatactttc 15951322  T
Q  436 aaaagcaaataaaagaaagttccgccatgaatggcagtggtgatgatggaaaggacttgacattgcagagaaaaagatgaagtgtcgggagaaagaagaa 535  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15951321 gaaagcaaataaaagaaagttccgccatgaatggcagtggtgatgatggaaaggacttgacattgcagagaaaaagatgaagtgtcgggagaaagaagaa 15951222  T
Q  536 aatacgaggaaaggttacagcacatatttgttctt 570  Q
    ||||| |||||||||||||||||||||||||||||    
T  15951221 aatacaaggaaaggttacagcacatatttgttctt 15951187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 19172587 - 19172626
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  19172587 tgtcaacgaatccgttgacacctggtgtcaatggatcctg 19172626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 25469098 - 25469137
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  25469098 tgtcaacgaatccgttgacacctggtgtcaacggatcctg 25469137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 34309242 - 34309281
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  34309242 tgtcaacgaatccgttgacacctggtgtcaacggatcctg 34309281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 46391878 - 46391917
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  46391878 tgtcaacgaatccgttgacacctggtgtcaacggatcctg 46391917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 4433859 - 4433897
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  4433859 tgtcaacgaatccgttgacacctggtgtcaacggatcct 4433897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 13142679 - 13142717
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  13142679 tgtcaacgaatccgttgacacctggtgtcaagggatcct 13142717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 24992010 - 24991972
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  24992010 tgtcaacgaatccgttgacacctggtgtcaatggatcct 24991972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 47967902 - 47967864
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  47967902 tgtcaacgaatccgttgacacctggtgtcaatggatcct 47967864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 49680851 - 49680813
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  49680851 tgtcaacgaatccgttgacacctggtgtcaacggatcct 49680813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 258 - 295
Target Start/End: Original strand, 17172675 - 17172712
Alignment:
Q  258 gtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    |||||||||||||||||||||||||||||| |||||||    
T  17172675 gtcaacgaatccgttgacacctggtgtcaacggatcct 17172712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 7559211 - 7559250
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    |||||||| |||||||||||||||||||||| ||||||||    
T  7559211 tgtcaacggatccgttgacacctggtgtcaacggatcctg 7559250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 11548840 - 11548801
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  11548840 tgtcaacgaatctgttgacacctggtgtcaacggatcctg 11548801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 13263528 - 13263567
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||| ||||||||||||||||| ||||||||    
T  13263528 tgtcaacgaatccattgacacctggtgtcaacggatcctg 13263567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 25468550 - 25468511
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    |||||| |||||||||||||||||||||||| ||||||||    
T  25468550 tgtcaatgaatccgttgacacctggtgtcaatggatcctg 25468511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 27256724 - 27256763
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  27256724 tgtcaacgaatacgttgacacctggtgtcaacggatcctg 27256763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 30663398 - 30663359
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  30663398 tgtcaacgaatccgttgatacctggtgtcaacggatcctg 30663359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 30663988 - 30664027
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    |||||||||||||||||||||| |||||||| ||||||||    
T  30663988 tgtcaacgaatccgttgacaccaggtgtcaacggatcctg 30664027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 295
Target Start/End: Original strand, 30932810 - 30932845
Alignment:
Q  260 caacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    |||||||||||||||||||||||||||| |||||||    
T  30932810 caacgaatccgttgacacctggtgtcaacggatcct 30932845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 34308513 - 34308474
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  34308513 tgtcaacgaatacgttgacacctggtgtcaacggatcctg 34308474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 4439218 - 4439256
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  4439218 tgtcaacgaatccgttgacaccaggtgtcaacggatcct 4439256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 10120823 - 10120785
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||| ||||||||||||||||||||||| |||||||    
T  10120823 tgtcaaccaatccgttgacacctggtgtcaacggatcct 10120785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 10121564 - 10121602
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||| ||||||||||||||||||||||| |||||||    
T  10121564 tgtcaaccaatccgttgacacctggtgtcaacggatcct 10121602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 11704820 - 11704858
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||| ||||||||| |||||||    
T  11704820 tgtcaacgaatccgttgacacttggtgtcaatggatcct 11704858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 13262873 - 13262835
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  13262873 tgtcaacgaattcgttgacacctggtgtcaacggatcct 13262835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 17171971 - 17171933
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  17171971 tgtcaacgaattcgttgacacctggtgtcaacggatcct 17171933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 24992756 - 24992794
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  24992756 tgtcaacgaatccgttgacacctggtgtcagtggatcct 24992794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 32039130 - 32039192
Alignment:
Q  183 cgtgagtcaatttagagaatatt-actagtctttgattaaaatagattgacggttgagatttg 244  Q
    |||||||||||||| | | |||| | ||| |||||||||||||| ||||||||||||||||||    
T  32039130 cgtgagtcaatttaaaaattatttattagcctttgattaaaataaattgacggttgagatttg 32039192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 37577657 - 37577695
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  37577657 tgtcaacgaatccgttgacacctggtatcaatggatcct 37577695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 257 - 293
Target Start/End: Complemental strand, 45818061 - 45818025
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatc 293  Q
    |||||| |||||||||||||||||||||||| |||||    
T  45818061 tgtcaatgaatccgttgacacctggtgtcaacggatc 45818025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 46812174 - 46812206
Alignment:
Q  221 aaatagattgacggttgagatttggtgtcaacg 253  Q
    |||||||| ||||||||||||||||||||||||    
T  46812174 aaatagatagacggttgagatttggtgtcaacg 46812206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 19 - 253
Target Start/End: Original strand, 16903428 - 16903662
Alignment:
Q  19 acgttgcaatctatatgagaaataaatcaaggagtggagatggtggagagcagcgcattgtccagaaaaaacaattgagcatcagtatgatttannnnnn 118  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  16903428 acgttgcaatctatatgagaaataaatcaaggagtggaggtggtggagagcagcgcattgtccagaaaaaacaattgagcatcagtatgatttatttttt 16903527  T
Q  119 ngttgaacaaacatcattgtgattttaaattgccatcaaaattaattaaataaggatacactagcgtgagtcaatttagagaatattactagtctttgat 218  Q
     ||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  16903528 tgttgaacaaacatcattgtgattttaaatggccatcaaaagtaattaagtaaggatacattagcgtgagtcaatttagagaatattactagcctttgat 16903627  T
Q  219 taaaatagattgacggttgagatttggtgtcaacg 253  Q
    |||||||||||||||||||||||||||||||||||    
T  16903628 taaaatagattgacggttgagatttggtgtcaacg 16903662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 42059360 - 42059444
Alignment:
Q  169 taaggatacactagcgtgagtcaatttagagaatattactagtctttgattaaaatagattgacggttgagatttggtgtcaacg 253  Q
    |||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||| ||||||||||||||    
T  42059360 taaggatacactggcgtgagtcaatttagagaatattattagcctttgattaaaatagatcgacggttgaaatttggtgtcaacg 42059444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 20774192 - 20774231
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  20774192 tgtcaacgaatccgttgacacctggtgtcaatggatcctg 20774231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 30573721 - 30573760
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  30573721 tgtcaacgaatccgttgacacctggtgtcaatggatcctg 30573760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 53732476 - 53732437
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  53732476 tgtcaacgaatccgttgacacctggtgtcaacggatcctg 53732437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 2444413 - 2444375
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  2444413 tgtcaacgaatccgttgacacctggtgtcaacggatcct 2444375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 19550327 - 19550289
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  19550327 tgtcaacgaatccgttgacacctggtgtcaagggatcct 19550289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 47688491 - 47688529
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  47688491 tgtcaacgaatccgttgacacctggtgtcaacggatcct 47688529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 53772848 - 53772810
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  53772848 tgtcaacgaatccgttgacacctggtgtcaacggatcct 53772810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 257 - 293
Target Start/End: Complemental strand, 52871339 - 52871303
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatc 293  Q
    ||||||||||||||||||||||||||||||| |||||    
T  52871339 tgtcaacgaatccgttgacacctggtgtcaacggatc 52871303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 257 - 293
Target Start/End: Original strand, 55001452 - 55001488
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatc 293  Q
    ||||||||||||||||||||||||||||||| |||||    
T  55001452 tgtcaacgaatccgttgacacctggtgtcaacggatc 55001488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 8247737 - 8247698
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    |||||||||||||||||||||| |||||||| ||||||||    
T  8247737 tgtcaacgaatccgttgacaccaggtgtcaacggatcctg 8247698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 8248532 - 8248571
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    |||||||||||||||||||| |||||||||| ||||||||    
T  8248532 tgtcaacgaatccgttgacatctggtgtcaacggatcctg 8248571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 8266197 - 8266236
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    |||||||||||||||||||| |||||||||| ||||||||    
T  8266197 tgtcaacgaatccgttgacatctggtgtcaacggatcctg 8266236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 16903680 - 16903719
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| | ||||||    
T  16903680 tgtcaacgaatccgttgacacctggtgtcaacgaatcctg 16903719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 19080426 - 19080387
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    |||||||||||||||||||||||||||||||  |||||||    
T  19080426 tgtcaacgaatccgttgacacctggtgtcaacagatcctg 19080387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 24158832 - 24158871
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  24158832 tgtcaacgaatctgttgacacctggtgtcaatggatcctg 24158871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 296
Target Start/End: Original strand, 31329733 - 31329768
Alignment:
Q  261 aacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||| ||||||||    
T  31329733 aacgaatccgttgacacctggtgtcaacggatcctg 31329768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 47785811 - 47785850
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    |||||||||||||||||||||||||||||||  |||||||    
T  47785811 tgtcaacgaatccgttgacacctggtgtcaacagatcctg 47785850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 53147912 - 53147873
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    |||||||||||||||||||| |||||||||| ||||||||    
T  53147912 tgtcaacgaatccgttgacatctggtgtcaatggatcctg 53147873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 292
Target Start/End: Complemental strand, 55976207 - 55976172
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggat 292  Q
    ||||||||||||||||||||||||||||||| ||||    
T  55976207 tgtcaacgaatccgttgacacctggtgtcaacggat 55976172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 599313 - 599351
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  599313 tgtcaacgaatccgttgacaccaggtgtcaacggatcct 599351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 3654527 - 3654565
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||| ||||| |||||||    
T  3654527 tgtcaacgaatccgttgacacctggcgtcaacggatcct 3654565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 287
Target Start/End: Original strand, 16903655 - 16903685
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaa 287  Q
    |||||||||||||||||||||||||||||||    
T  16903655 tgtcaacgaatccgttgacacctggtgtcaa 16903685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 24551736 - 24551698
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||| ||||||||||||||| |||||||    
T  24551736 tgtcaacgaatccgtcgacacctggtgtcaatggatcct 24551698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 24551935 - 24551973
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||| ||||||||||||||||||||||| |||||||    
T  24551935 tgtcaacaaatccgttgacacctggtgtcaatggatcct 24551973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 26147044 - 26147082
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  26147044 tgtcaacgaattcgttgacacctggtgtcaacggatcct 26147082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 42882693 - 42882731
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  42882693 tgtcaacgaatccgttgacatctggtgtcaacggatcct 42882731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 287
Target Start/End: Original strand, 53733743 - 53733773
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaa 287  Q
    |||||||||||||||||||||||||||||||    
T  53733743 tgtcaacgaatccgttgacacctggtgtcaa 53733773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 53773598 - 53773636
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  53773598 tgtcaacgaatccgttgacacctgatgtcaacggatcct 53773636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 55000728 - 55000690
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  55000728 tgtcaacgaatccgttgacatctggtgtcaatggatcct 55000690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 55976967 - 55977005
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||||| | |||||||    
T  55976967 tgtcaacgaatccgttgacacctggtgtcgatggatcct 55977005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 294
Target Start/End: Complemental strand, 8265402 - 8265365
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcc 294  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  8265402 tgtcaacgaatccgttgacaccaggtgtcaacggatcc 8265365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 168; Significance: 1e-89; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 21 - 253
Target Start/End: Complemental strand, 5862151 - 5861919
Alignment:
Q  21 gttgcaatctatatgagaaataaatcaaggagtggagatggtggagagcagcgcattgtccagaaaaaacaattgagcatcagtatgatttannnnnnng 120  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||| |||||||||||||||||||||| | |||||||       |    
T  5862151 gttgcaatctatatgagaaataaatcaaggagtggatgtggtggagatcagcgcattgttcagaaaaaacaattgagcatcattgtgatttatttttttg 5862052  T
Q  121 ttgaacaaacatcattgtgattttaaattgccatcaaaattaattaaataaggatacactagcgtgagtcaatttagagaatattactagtctttgatta 220  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  5862051 ttgaacaaacatcattgtgattttaaattgccatcaaaagtaattaagtaaggatacattagcgtgagtcaatttagagaatattactagcctttgatta 5861952  T
Q  221 aaatagattgacggttgagatttggtgtcaacg 253  Q
    ||||||||||| |||||||||||||||||||||    
T  5861951 aaatagattgatggttgagatttggtgtcaacg 5861919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 10171316 - 10171277
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  10171316 tgtcaacgaatccgttgacacctggtgtcaacggatcctg 10171277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 26529524 - 26529563
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  26529524 tgtcaacgaatccgttgacacctggtgtcaacggatcctg 26529563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 8488509 - 8488471
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  8488509 tgtcaacgaatccgttgacacctggtgtcaatggatcct 8488471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 19311838 - 19311877
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| | ||||||    
T  19311838 tgtcaacgaatccgttgacacctggtgtcaacgaatcctg 19311877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 19323778 - 19323817
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  19323778 tgtcaacgaattcgttgacacctggtgtcaacggatcctg 19323817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 33436285 - 33436324
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    |||||||||||||||||||| |||||||||| ||||||||    
T  33436285 tgtcaacgaatccgttgacatctggtgtcaacggatcctg 33436324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 10171977 - 10172015
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  10171977 tgtcaacgaatgcgttgacacctggtgtcaacggatcct 10172015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 287
Target Start/End: Complemental strand, 19323023 - 19322993
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaa 287  Q
    |||||||||||||||||||||||||||||||    
T  19323023 tgtcaacgaatccgttgacacctggtgtcaa 19322993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 26528863 - 26528825
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  26528863 tgtcaacgaatgcgttgacacctggtgtcaacggatcct 26528825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 12344932 - 12344896
Alignment:
Q  259 tcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    |||||||||| |||||||||||||||||| |||||||    
T  12344932 tcaacgaatctgttgacacctggtgtcaatggatcct 12344896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 157; Significance: 4e-83; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 30 - 251
Target Start/End: Complemental strand, 15338 - 15117
Alignment:
Q  30 tatatgagaaataaatcaaggagtggagatggtggagagcagcgcattgtccagaaaaaacaattgagcatcagtatgatttannnnnnngttgaacaaa 129  Q
    |||||||| ||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||| ||| | |||||||       ||||||||||    
T  15338 tatatgagcaataaatcaaggagtggatgtggtggagagcagcgcattgtccagaacaaacaattgagcttcattgtgatttatttttttgttgaacaaa 15239  T
Q  130 catcattgtgattttaaattgccatcaaaattaattaaataaggatacactagcgtgagtcaatttagagaatattactagtctttgattaaaatagatt 229  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15238 catcattgtgattttaaattgccatcaaaagtaattaagtaaggatacattagcgtgagtcaatttagagaatattactagcctttgattaaaatagatt 15139  T
Q  230 gacggttgagatttggtgtcaa 251  Q
    ||||||||||||||||||||||    
T  15138 gacggttgagatttggtgtcaa 15117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 22082 - 22121
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  22082 tgtcaacgaatccgttgacacctggtgtcaacggatcctg 22121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 156; Significance: 1e-82; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 21 - 256
Target Start/End: Original strand, 15774763 - 15774999
Alignment:
Q  21 gttgcaatctatatgagaaataaatcaaggagtggagatggtggagagcagcgcattgtccagaaaaaacaattgagcatcagtatgatttannnnnnng 120  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| | || |||             
T  15774763 gttgcaatctatataagaaataaatcaaggagtggaggtggtggagagcagcgcattgtctagaaaaaacaattgagcatcattgtgttttttttttttt 15774862  T
Q  121 tt-gaacaaacatcattgtgattttaaattgccatcaaaattaattaaataaggatacactagcgtgagtcaatttagagaatattactagtctttgatt 219  Q
    || ||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  15774863 tttgaacaaacatcattgtgattttaaagtgccatcaaaagtaattaagtaaggatacattagcgtgagtcaatttagagaatattactagcctttgatt 15774962  T
Q  220 aaaatagattgacggttgagatttggtgtcaacggat 256  Q
    |||||||||||||||||||||||||||||||||||||    
T  15774963 aaaatagattgacggttgagatttggtgtcaacggat 15774999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 29719487 - 29719448
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  29719487 tgtcaacgaatccgttgacacctggtgtcaacggatcctg 29719448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 1297134 - 1297172
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  1297134 tgtcaacgaatccgttgacacctggtgtcaacggatcct 1297172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 9275627 - 9275589
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  9275627 tgtcaacgaatccgttgacacctggtgtcaacggatcct 9275589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 11750298 - 11750260
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  11750298 tgtcaacgaatccgttgacacctggtgtcaatggatcct 11750260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 15902893 - 15902931
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  15902893 tgtcaacgaatccgttgacacctggtgtcaacggatcct 15902931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 29513158 - 29513196
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  29513158 tgtcaacgaatccgttgacacctggtgtcaatggatcct 29513196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 1296420 - 1296381
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  1296420 tgtcaacgaattcgttgacacctggtgtcaacggatcctg 1296381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 9276341 - 9276380
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  9276341 tgtcaacgaattcgttgacacctggtgtcaacggatcctg 9276380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 9540372 - 9540333
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  9540372 tgtcaacgaattcgttgacacctggtgtcaacggatcctg 9540333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 22560579 - 22560618
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    |||||||||||||||||||||||| |||||| ||||||||    
T  22560579 tgtcaacgaatccgttgacacctgatgtcaacggatcctg 22560618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 36237672 - 36237633
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    |||||| |||||||||||||||||||||||| ||||||||    
T  36237672 tgtcaatgaatccgttgacacctggtgtcaacggatcctg 36237633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 42459092 - 42459053
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  42459092 tgtcaacgaatctgttgacacctggtgtcaatggatcctg 42459053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 287
Target Start/End: Complemental strand, 11007272 - 11007242
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaa 287  Q
    |||||||||||||||||||||||||||||||    
T  11007272 tgtcaacgaatccgttgacacctggtgtcaa 11007242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 12725626 - 12725664
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||| ||||||||||||||||||||||| |||||||    
T  12725626 tgtcaacaaatccgttgacacctggtgtcaacggatcct 12725664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 287
Target Start/End: Original strand, 16692985 - 16693015
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaa 287  Q
    |||||||||||||||||||||||||||||||    
T  16692985 tgtcaacgaatccgttgacacctggtgtcaa 16693015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 22301881 - 22301919
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  22301881 tgtcaacgaattcgttgacacctggtgtcaacggatcct 22301919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 27177953 - 27177915
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  27177953 tgtcaacgaattcgttgacacctggtgtcaacggatcct 27177915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 294
Target Start/End: Complemental strand, 18820473 - 18820436
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcc 294  Q
    |||||||||||||||||||||||| |||||| ||||||    
T  18820473 tgtcaacgaatccgttgacacctgatgtcaatggatcc 18820436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 295
Target Start/End: Original strand, 26589029 - 26589066
Alignment:
Q  258 gtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  26589029 gtcaacgaatccgttgacacttggtgtcaacggatcct 26589066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 294
Target Start/End: Original strand, 26752734 - 26752771
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcc 294  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  26752734 tgtcaacgaattcgttgacacctggtgtcaacggatcc 26752771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 1296453 - 1296413
Alignment:
Q  213 tttgattaaaatagattgacggttgagatttggtgtcaacg 253  Q
    ||||||||||| | ||||| |||||||||||||||||||||    
T  1296453 tttgattaaaaaaaattgatggttgagatttggtgtcaacg 1296413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 9276308 - 9276348
Alignment:
Q  213 tttgattaaaatagattgacggttgagatttggtgtcaacg 253  Q
    ||||||||||| | ||||| |||||||||||||||||||||    
T  9276308 tttgattaaaaaaaattgatggttgagatttggtgtcaacg 9276348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 257 - 293
Target Start/End: Complemental strand, 40252063 - 40252027
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatc 293  Q
    |||||||||||||||||||||||||||| || |||||    
T  40252063 tgtcaacgaatccgttgacacctggtgttaatggatc 40252027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 123; Significance: 7e-63; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 428696 - 428920
Alignment:
Q  27 atctatatgagaaataaatcaaggagtggagatggtggagagcagcgcattgtccagaaaaaacaattgagcatcagtatgatttannnnnnngttgaac 126  Q
    ||||||||||||||||||||||||| ||||  |||||||||| ||||||||||||||||||||||||||||||||| |  || ||        | |||||    
T  428696 atctatatgagaaataaatcaaggaatggatgtggtggagagtagcgcattgtccagaaaaaacaattgagcatcatt--gagtttcttttttggtgaac 428793  T
Q  127 aaacatcattgtgattttaaattgccatcaaaattaattaaataaggatacactagcgtgagtcaatttagagaatattactagtctttgattaaaatag 226  Q
    |||||| |||| |||||||||||| |||||||| ||||||  |||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||    
T  428794 aaacataattgggattttaaattgtcatcaaaagtaattacgtaaggatacattagcgtgagtcaatttagagaatattattagcctttgattaaaatag 428893  T
Q  227 attgacggttgagatttggtgtcaacg 253  Q
    |||| ||||||||||||||||||||||    
T  428894 attggcggttgagatttggtgtcaacg 428920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 31603002 - 31603048
Alignment:
Q  208 tagtctttgattaaaatagattgacggttgagatttggtgtcaacgg 254  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||    
T  31603002 tagtctttgattaaagtaaattgacggttgagatttggtgtcaacgg 31603048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 41974681 - 41974642
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  41974681 tgtcaacgaatccgttgacacctggtgtcaacggatcctg 41974642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 38576313 - 38576351
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  38576313 tgtcaacgaatccgttgacacctggtgtcaacggatcct 38576351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 3165133 - 3165172
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    |||||||||||||||||||||||| |||||| ||||||||    
T  3165133 tgtcaacgaatccgttgacacctgatgtcaacggatcctg 3165172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 8372954 - 8372915
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    |||||||||||||||||||||| |||||||| ||||||||    
T  8372954 tgtcaacgaatccgttgacaccaggtgtcaacggatcctg 8372915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 8373704 - 8373743
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  8373704 tgtcaacgaatccgttgacacttggtgtcaacggatcctg 8373743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 31641552 - 31641513
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||| ||||||||||||||||| ||||||||    
T  31641552 tgtcaacgaatccattgacacctggtgtcaatggatcctg 31641513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 37732867 - 37732828
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    |||||||||||||||||||||| |||||||| ||||||||    
T  37732867 tgtcaacgaatccgttgacaccaggtgtcaacggatcctg 37732828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 256
Target Start/End: Complemental strand, 38575632 - 38575589
Alignment:
Q  213 tttgattaaaatagattgacggttgagatttggtgtcaacggat 256  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||    
T  38575632 tttgattaaaaaaaattgatggttgagatttggtgtcaacggat 38575589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 11686267 - 11686229
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||| ||| |||||||    
T  11686267 tgtcaacgaatccgttgacacctggtgccaatggatcct 11686229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 14825684 - 14825646
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||| ||||||| |||||||    
T  14825684 tgtcaacgaatccgttgacacctagtgtcaacggatcct 14825646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 27441507 - 27441469
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  27441507 tgtcaacgaattcgttgacacctggtgtcaacggatcct 27441469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 287
Target Start/End: Original strand, 32414535 - 32414565
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaa 287  Q
    |||||||||||||||||||||||||||||||    
T  32414535 tgtcaacgaatccgttgacacctggtgtcaa 32414565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 257 - 293
Target Start/End: Original strand, 26654389 - 26654425
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatc 293  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  26654389 tgtcaacgaatccattgacacctggtgtcaacggatc 26654425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 257 - 293
Target Start/End: Complemental strand, 28929886 - 28929850
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatc 293  Q
    |||||||||||||||||||| |||||||||| |||||    
T  28929886 tgtcaacgaatccgttgacatctggtgtcaatggatc 28929850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 37734209 - 37734249
Alignment:
Q  214 ttgattaaaatagattgacggttgagatttggtgtcaacgg 254  Q
    ||||||| || |||| |||||||||||||||||||||||||    
T  37734209 ttgattagaaaagatggacggttgagatttggtgtcaacgg 37734249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 26632 - 26593
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  26632 tgtcaacgaatccgttgacacctggtgtcaacggatcctg 26593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000006; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 7668522 - 7668483
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  7668522 tgtcaacgaatccgttgacacctggtgtcaacggatcctg 7668483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 13785605 - 13785644
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  13785605 tgtcaacgaatccgttgacacctggtgtcaacggatcctg 13785644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 25599062 - 25599023
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  25599062 tgtcaacgaatccgttgacacctggtgtcaacggatcctg 25599023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 26636143 - 26636104
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  26636143 tgtcaacgaatccgttgacacctggtgtcaacggatcctg 26636104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 30661467 - 30661506
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  30661467 tgtcaacgaatccgttgacacctggtgtcaacggatcctg 30661506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 37949645 - 37949606
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  37949645 tgtcaacgaatccgttgacacctggtgtcaacggatcctg 37949606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 45099905 - 45099944
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  45099905 tgtcaacgaatccgttgacacctggtgtcaacggatcctg 45099944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 46428227 - 46428188
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  46428227 tgtcaacgaatccgttgacacctggtgtcaacggatcctg 46428188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 25342537 - 25342499
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  25342537 tgtcaacgaatccgttgacacctggtgtcaacggatcct 25342499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 25343343 - 25343305
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  25343343 tgtcaacgaatccgttgacacctggtgtcaacggatcct 25343305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 30660633 - 30660595
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  30660633 tgtcaacgaatccgttgacacctggtgtcaacggatcct 30660595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 37950479 - 37950517
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  37950479 tgtcaacgaatccgttgacacctggtgtcaacggatcct 37950517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 47719716 - 47719754
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  47719716 tgtcaacgaatccgttgacacctggtgtcaatggatcct 47719754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 257 - 293
Target Start/End: Original strand, 43065128 - 43065164
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatc 293  Q
    ||||||||||||||||||||||||||||||| |||||    
T  43065128 tgtcaacgaatccgttgacacctggtgtcaacggatc 43065164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 3903351 - 3903390
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    |||||||| |||||||||||||||||||||| ||||||||    
T  3903351 tgtcaacggatccgttgacacctggtgtcaacggatcctg 3903390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 296
Target Start/End: Original strand, 18977785 - 18977820
Alignment:
Q  261 aacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||| ||||||||    
T  18977785 aacgaatccgttgacacctggtgtcaatggatcctg 18977820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 19067677 - 19067638
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  19067677 tgtcaacgaatccgttgacacgtggtgtcaacggatcctg 19067638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 19068407 - 19068446
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  19068407 tgtcaacgaatacgttgacacctggtgtcaacggatcctg 19068446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 26636872 - 26636911
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||| ||||||| ||||||||    
T  26636872 tgtcaacgaatccgttgacaccttgtgtcaacggatcctg 26636911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 46428829 - 46428868
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  46428829 tgtcaacgaattcgttgacacctggtgtcaacggatcctg 46428868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 1417648 - 1417610
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  1417648 tgtcaacgaattcgttgacacctggtgtcaacggatcct 1417610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 3029210 - 3029248
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  3029210 tgtcaacgaattcgttgacacctggtgtcaacggatcct 3029248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 3772538 - 3772576
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  3772538 tgtcaacgaatacgttgacacctggtgtcaacggatcct 3772576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 16664137 - 16664175
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    |||||||| |||||||||||||||||||||| |||||||    
T  16664137 tgtcaacggatccgttgacacctggtgtcaacggatcct 16664175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 17638497 - 17638535
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    |||||||| |||||||||||||||||||||| |||||||    
T  17638497 tgtcaacggatccgttgacacctggtgtcaacggatcct 17638535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 23901106 - 23901144
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  23901106 tgtcaacgaattcgttgacacctggtgtcaatggatcct 23901144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 24389628 - 24389666
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  24389628 tgtcaatgaatccgttgacacctggtgtcaacggatcct 24389666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 24719375 - 24719337
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  24719375 tgtcaacgaatccgttgacatctggtgtcaacggatcct 24719337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 27948486 - 27948448
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  27948486 tgtcaacgaattcgttgacacctggtgtcaacggatcct 27948448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 31278166 - 31278204
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  31278166 tgtcaacgaatccgttgacatctggtgtcaacggatcct 31278204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 261 - 295
Target Start/End: Original strand, 37395515 - 37395549
Alignment:
Q  261 aacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||| |||||||    
T  37395515 aacgaatccgttgacacctggtgtcaacggatcct 37395549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 38225987 - 38226025
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  38225987 tgtcaacgaattcgttgacacctggtgtcaacggatcct 38226025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 45162009 - 45161971
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    |||||||||||||||| |||||||||||||| |||||||    
T  45162009 tgtcaacgaatccgttaacacctggtgtcaatggatcct 45161971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 25343218 - 25343258
Alignment:
Q  213 tttgattaaaatagattgacggttgagatttggtgtcaacg 253  Q
    ||||||||||| | ||||| |||||||||||||||||||||    
T  25343218 tttgattaaaaaaaattgatggttgagatttggtgtcaacg 25343258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000006; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 234741 - 234702
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  234741 tgtcaacgaatccgttgacacctggtgtcaacggatcctg 234702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 237832 - 237871
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  237832 tgtcaacgaatccgttgacacctggtgtcaacggatcctg 237871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 6476802 - 6476841
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  6476802 tgtcaacgaatccgttgacacctggtgtcaacggatcctg 6476841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 10554562 - 10554523
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  10554562 tgtcaacgaatccgttgacacctggtgtcaacggatcctg 10554523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 19128810 - 19128771
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  19128810 tgtcaacgaatccgttgacacctggtgtcaacggatcctg 19128771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 19359744 - 19359705
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  19359744 tgtcaacgaatccgttgacacctggtgtcaacggatcctg 19359705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 28705890 - 28705929
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  28705890 tgtcaacgaatccgttgacacctggtgtcaacggatcctg 28705929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 29046069 - 29046030
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  29046069 tgtcaacgaatccgttgacacctggtgtcaacggatcctg 29046030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 235632 - 235594
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  235632 tgtcaacgaatccgttgacacctggtgtcaatggatcct 235594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 1281876 - 1281838
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  1281876 tgtcaacgaatccgttgacacctggtgtcaatggatcct 1281838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 1283536 - 1283574
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  1283536 tgtcaacgaatccgttgacacctggtgtcaacggatcct 1283574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 7632135 - 7632097
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  7632135 tgtcaacgaatccgttgacacctggtgtcaacggatcct 7632097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 14478961 - 14478922
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    |||||||||||||||||||||||| |||||| ||||||||    
T  14478961 tgtcaacgaatccgttgacacctgatgtcaacggatcctg 14478922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 19360487 - 19360526
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  19360487 tgtcaacgaattcgttgacacctggtgtcaacggatcctg 19360526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 27364498 - 27364537
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||| ||||||||||||||||| ||||||||    
T  27364498 tgtcaacgaatccattgacacctggtgtcaacggatcctg 27364537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 29087965 - 29087926
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    |||||| |||||||||||||||||||||||| ||||||||    
T  29087965 tgtcaatgaatccgttgacacctggtgtcaacggatcctg 29087926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 236940 - 236978
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  236940 tgtctacgaatccgttgacacctggtgtcaatggatcct 236978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 287
Target Start/End: Original strand, 1283511 - 1283541
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaa 287  Q
    |||||||||||||||||||||||||||||||    
T  1283511 tgtcaacgaatccgttgacacctggtgtcaa 1283541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 1554094 - 1554132
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  1554094 tgtcaacgaattcgttgacacctggtgtcaacggatcct 1554132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 287
Target Start/End: Complemental strand, 10554587 - 10554557
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaa 287  Q
    |||||||||||||||||||||||||||||||    
T  10554587 tgtcaacgaatccgttgacacctggtgtcaa 10554557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 294
Target Start/End: Complemental strand, 25858250 - 25858213
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcc 294  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  25858250 tgtcaacgaatccgttgacacctagtgtcaacggatcc 25858213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 260 - 296
Target Start/End: Original strand, 34709051 - 34709087
Alignment:
Q  260 caacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||  |||||||    
T  34709051 caacgaatccgttgacacctggtgtcaacagatcctg 34709087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000006; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 21727541 - 21727580
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  21727541 tgtcaacgaatccgttgacacctggtgtcaacggatcctg 21727580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 48648244 - 48648205
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  48648244 tgtcaacgaatccgttgacacctggtgtcaacggatcctg 48648205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 17603209 - 17603171
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  17603209 tgtcaacgaatccgttgacacctggtgtcaacggatcct 17603171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 257 - 293
Target Start/End: Original strand, 265110 - 265146
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatc 293  Q
    ||||||||||||||||||||||||||||||| |||||    
T  265110 tgtcaacgaatccgttgacacctggtgtcaacggatc 265146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 14871194 - 14871155
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  14871194 tgtcaacgaattcgttgacacctggtgtcaacggatcctg 14871155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 37988230 - 37988269
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  37988230 tgtcaacgaattcgttgacacctggtgtcaatggatcctg 37988269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 46150741 - 46150780
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||| ||||||| ||||||||    
T  46150741 tgtcaacgaatccgttgacacctagtgtcaacggatcctg 46150780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 48649185 - 48649224
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  48649185 tgtcaacgaatctgttgacacctggtgtcaatggatcctg 48649224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 48765082 - 48765121
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||| ||||||||||||||||| ||||||||    
T  48765082 tgtcaacgaatccattgacacctggtgtcaatggatcctg 48765121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 55373718 - 55373757
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||||||||||||||||||||||||||| | ||||||    
T  55373718 tgtcaacgaatccgttgacacctggtgtcaacgaatcctg 55373757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 17603973 - 17604011
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  17603973 tgtcaacgaatccgttgacacctggtgtcattggatcct 17604011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 287
Target Start/End: Complemental strand, 17605747 - 17605717
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaa 287  Q
    |||||||||||||||||||||||||||||||    
T  17605747 tgtcaacgaatccgttgacacctggtgtcaa 17605717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 31974692 - 31974654
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    ||||||||||||||||||||| ||||||||| |||||||    
T  31974692 tgtcaacgaatccgttgacacttggtgtcaacggatcct 31974654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 287
Target Start/End: Complemental strand, 48413360 - 48413330
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaa 287  Q
    |||||||||||||||||||||||||||||||    
T  48413360 tgtcaacgaatccgttgacacctggtgtcaa 48413330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 29854009 - 29853960
Alignment:
Q  221 aaatagattgacggttgagatttggtgtcaacggat-tgtcaacgaatcc 269  Q
    |||||||| |||||||||||||||||||||||| || |||||||| ||||    
T  29854009 aaatagatagacggttgagatttggtgtcaacgaatatgtcaacggatcc 29853960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 286
Target Start/End: Original strand, 44699832 - 44699861
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtca 286  Q
    ||||||||||||||||||||||||||||||    
T  44699832 tgtcaacgaatccgttgacacctggtgtca 44699861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 294
Target Start/End: Complemental strand, 46149670 - 46149633
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcc 294  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  46149670 tgtcaacgaatccattgacacctggtgtcaatggatcc 46149633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 257 - 293
Target Start/End: Complemental strand, 37987274 - 37987238
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatc 293  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  37987274 tgtcaacgaatccattgacacctggtgtcaacggatc 37987238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 257 - 293
Target Start/End: Original strand, 40872820 - 40872856
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatc 293  Q
    |||||| |||||||||||||||||||||||| |||||    
T  40872820 tgtcaatgaatccgttgacacctggtgtcaacggatc 40872856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2007 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold2007
Description:

Target: scaffold2007; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 791 - 752
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  791 tgtcaacgaatccgttgaaacctggtgtcaatggatcctg 752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 5391 - 5430
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcctg 296  Q
    ||||||| ||||||||||||||||||||||| ||||||||    
T  5391 tgtcaacaaatccgttgacacctggtgtcaacggatcctg 5430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 292
Target Start/End: Complemental strand, 39936 - 39901
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggat 292  Q
    ||||||||||||||||||||||||||||||| ||||    
T  39936 tgtcaacgaatccgttgacacctggtgtcaacggat 39901  T

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Target: scaffold0093 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 23740 - 23778
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaaaggatcct 295  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  23740 tgtcaacgaatccgttgacaactggtgtcaatggatcct 23778  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 287
Target Start/End: Complemental strand, 181050 - 181020
Alignment:
Q  257 tgtcaacgaatccgttgacacctggtgtcaa 287  Q
    |||||||||||||||||||||||||||||||    
T  181050 tgtcaacgaatccgttgacacctggtgtcaa 181020  T

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