View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18421_low_31 (Length: 345)

Name: NF18421_low_31
Description: NF18421
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18421_low_31
NF18421_low_31
[»] chr7 (34 HSPs)
chr7 (17-198)||(49010239-49010420)
chr7 (197-256)||(29706877-29706936)
chr7 (17-184)||(37001736-37001902)
chr7 (17-184)||(38637878-38638044)
chr7 (17-184)||(43183964-43184130)
chr7 (17-190)||(14776594-14776767)
chr7 (17-184)||(3113616-3113782)
chr7 (17-184)||(5555969-5556135)
chr7 (17-184)||(8867227-8867393)
chr7 (17-184)||(26625250-26625416)
chr7 (25-184)||(33686076-33686234)
chr7 (17-184)||(40919517-40919683)
chr7 (17-123)||(7003230-7003336)
chr7 (17-123)||(7049101-7049207)
chr7 (198-252)||(29701543-29701597)
chr7 (107-198)||(8722827-8722917)
chr7 (17-184)||(36631323-36631488)
chr7 (38-187)||(23582494-23582642)
chr7 (17-184)||(8394632-8394797)
chr7 (65-184)||(36658721-36658839)
chr7 (17-123)||(11020585-11020691)
chr7 (198-260)||(31894257-31894319)
chr7 (17-123)||(34388636-34388742)
chr7 (17-122)||(20606130-20606235)
chr7 (191-260)||(44307603-44307672)
chr7 (289-333)||(29706737-29706781)
chr7 (87-187)||(31252295-31252394)
chr7 (17-115)||(13072424-13072522)
chr7 (198-260)||(31894539-31894601)
chr7 (199-260)||(1511190-1511251)
chr7 (193-256)||(1511475-1511538)
chr7 (197-256)||(10878623-10878682)
chr7 (194-256)||(28408529-28408591)
chr7 (28-137)||(20609434-20609542)
[»] chr3 (29 HSPs)
chr3 (76-187)||(8257407-8257517)
chr3 (17-184)||(40081235-40081401)
chr3 (17-155)||(27935681-27935818)
chr3 (17-184)||(6930389-6930555)
chr3 (17-190)||(6268913-6269086)
chr3 (17-190)||(22967931-22968104)
chr3 (17-154)||(29564674-29564816)
chr3 (17-123)||(19565056-19565162)
chr3 (17-184)||(5135793-5135959)
chr3 (17-184)||(11017765-11017931)
chr3 (17-184)||(45183486-45183651)
chr3 (17-190)||(39772297-39772470)
chr3 (17-123)||(45336379-45336485)
chr3 (17-123)||(19390653-19390760)
chr3 (17-123)||(33041457-33041561)
chr3 (17-184)||(34083615-34083780)
chr3 (22-184)||(6503065-6503226)
chr3 (197-256)||(52091714-52091773)
chr3 (198-256)||(52090881-52090939)
chr3 (101-198)||(3159292-3159388)
chr3 (195-260)||(3612591-3612656)
chr3 (28-103)||(7468824-7468899)
chr3 (193-256)||(5048383-5048446)
chr3 (140-187)||(16094646-16094693)
chr3 (194-257)||(44506331-44506394)
chr3 (198-260)||(17574372-17574434)
chr3 (194-260)||(22975629-22975695)
chr3 (196-256)||(8851801-8851861)
chr3 (192-256)||(28830041-28830105)
[»] chr8 (38 HSPs)
chr8 (17-187)||(9175639-9175808)
chr8 (17-184)||(42231442-42231608)
chr8 (196-256)||(14161495-14161555)
chr8 (17-184)||(3648288-3648454)
chr8 (17-184)||(9877725-9877891)
chr8 (17-123)||(7278528-7278634)
chr8 (28-186)||(19104-19262)
chr8 (17-190)||(39915021-39915194)
chr8 (25-184)||(378937-379094)
chr8 (17-184)||(2728689-2728855)
chr8 (17-184)||(16787521-16787687)
chr8 (17-176)||(34136305-34136463)
chr8 (17-123)||(4404513-4404619)
chr8 (198-252)||(14156163-14156217)
chr8 (88-185)||(32539972-32540068)
chr8 (44-196)||(29351894-29352045)
chr8 (29-185)||(40401001-40401156)
chr8 (29-184)||(23402625-23402779)
chr8 (25-184)||(3435759-3435917)
chr8 (65-123)||(29727938-29727996)
chr8 (191-260)||(20178363-20178432)
chr8 (191-260)||(20223091-20223160)
chr8 (28-157)||(33639154-33639282)
chr8 (289-333)||(14161353-14161397)
chr8 (28-154)||(15541743-15541868)
chr8 (17-123)||(32964064-32964170)
chr8 (35-198)||(29892039-29892198)
chr8 (38-122)||(35852495-35852579)
chr8 (193-256)||(14577154-14577217)
chr8 (38-184)||(17479956-17480101)
chr8 (195-257)||(30928309-30928371)
chr8 (194-256)||(35482990-35483052)
chr8 (201-258)||(17844167-17844224)
chr8 (199-256)||(30928601-30928658)
chr8 (17-102)||(40470118-40470203)
chr8 (196-256)||(27912386-27912446)
chr8 (196-256)||(27958805-27958865)
chr8 (17-57)||(32540086-32540126)
[»] chr1 (23 HSPs)
chr1 (17-190)||(41971746-41971919)
chr1 (22-190)||(3829492-3829659)
chr1 (17-184)||(11957845-11958011)
chr1 (25-184)||(32981551-32981709)
chr1 (17-184)||(35908033-35908199)
chr1 (17-123)||(7433927-7434033)
chr1 (17-103)||(32944413-32944499)
chr1 (17-123)||(42310495-42310601)
chr1 (17-184)||(17445799-17445965)
chr1 (17-123)||(23313500-23313606)
chr1 (17-82)||(7350228-7350293)
chr1 (65-158)||(28463490-28463582)
chr1 (196-256)||(12115240-12115300)
chr1 (28-115)||(5715373-5715460)
chr1 (28-123)||(42412370-42412464)
chr1 (29-103)||(18716322-18716396)
chr1 (197-260)||(7113863-7113926)
chr1 (193-256)||(19897170-19897233)
chr1 (198-253)||(40290073-40290128)
chr1 (194-256)||(17611713-17611775)
chr1 (194-260)||(25780173-25780239)
chr1 (38-123)||(3604778-3604863)
chr1 (17-102)||(33490211-33490296)
[»] chr4 (45 HSPs)
chr4 (17-184)||(28876810-28876976)
chr4 (17-184)||(3292392-3292558)
chr4 (17-184)||(6236015-6236181)
chr4 (17-184)||(6689731-6689897)
chr4 (17-123)||(10352439-10352545)
chr4 (17-155)||(29995507-29995644)
chr4 (17-184)||(42333270-42333436)
chr4 (17-190)||(13012695-13012868)
chr4 (17-190)||(20129820-20129993)
chr4 (17-190)||(26438766-26438939)
chr4 (22-184)||(33135940-33136101)
chr4 (17-190)||(34406771-34406944)
chr4 (17-190)||(43356411-43356584)
chr4 (17-190)||(47501280-47501453)
chr4 (17-158)||(29134152-29134292)
chr4 (65-184)||(17510723-17510841)
chr4 (17-184)||(35546458-35546623)
chr4 (17-184)||(43143080-43143246)
chr4 (29-123)||(30216301-30216395)
chr4 (27-184)||(25931225-25931381)
chr4 (16-184)||(48989833-48990000)
chr4 (35-122)||(26546856-26546943)
chr4 (17-123)||(30077191-30077297)
chr4 (25-190)||(36381836-36381999)
chr4 (65-184)||(13390943-13391061)
chr4 (193-256)||(21360451-21360514)
chr4 (193-260)||(30055488-30055555)
chr4 (25-152)||(48130491-48130617)
chr4 (28-158)||(56225820-56225950)
chr4 (35-185)||(13502113-13502261)
chr4 (70-184)||(44157182-44157295)
chr4 (17-179)||(49062453-49062614)
chr4 (200-256)||(30799612-30799668)
chr4 (87-190)||(26449291-26449393)
chr4 (65-184)||(30110516-30110634)
chr4 (28-171)||(31853743-31853885)
chr4 (193-256)||(37872761-37872824)
chr4 (76-123)||(40529651-40529698)
chr4 (193-260)||(46143555-46143622)
chr4 (65-123)||(50204643-50204702)
chr4 (194-256)||(13294891-13294953)
chr4 (198-256)||(25297679-25297737)
chr4 (65-121)||(4038262-4038318)
chr4 (199-259)||(30055208-30055268)
chr4 (196-260)||(42856801-42856865)
[»] chr5 (32 HSPs)
chr5 (17-184)||(15959441-15959607)
chr5 (25-123)||(23034488-23034586)
chr5 (22-184)||(31501214-31501375)
chr5 (17-184)||(13818484-13818650)
chr5 (17-184)||(31680872-31681038)
chr5 (17-184)||(33430826-33430992)
chr5 (17-190)||(26282805-26282978)
chr5 (17-190)||(36293108-36293281)
chr5 (17-122)||(192412-192517)
chr5 (17-184)||(39657022-39657191)
chr5 (17-184)||(16333395-16333561)
chr5 (65-156)||(38268944-38269034)
chr5 (30-123)||(37255123-37255216)
chr5 (17-184)||(1775871-1776036)
chr5 (17-184)||(17332115-17332281)
chr5 (23-102)||(28801712-28801791)
chr5 (16-123)||(31271911-31272018)
chr5 (17-103)||(10034409-10034495)
chr5 (17-123)||(12278412-12278518)
chr5 (25-123)||(36291884-36291982)
chr5 (25-198)||(16155510-16155683)
chr5 (17-190)||(39435203-39435376)
chr5 (17-123)||(43069362-43069468)
chr5 (40-158)||(30297492-30297606)
chr5 (188-256)||(35362206-35362274)
chr5 (199-256)||(27843023-27843080)
chr5 (28-147)||(8788334-8788452)
chr5 (197-256)||(15179078-15179137)
chr5 (197-256)||(32994443-32994502)
chr5 (198-256)||(32458075-32458133)
chr5 (194-256)||(35363278-35363340)
chr5 (199-256)||(19558161-19558218)
[»] scaffold0069 (1 HSPs)
scaffold0069 (17-190)||(18065-18238)
[»] chr6 (17 HSPs)
chr6 (35-185)||(23217452-23217600)
chr6 (199-256)||(21424643-21424700)
chr6 (17-184)||(28997235-28997401)
chr6 (17-184)||(34948277-34948443)
chr6 (17-190)||(399124-399297)
chr6 (29-187)||(28931526-28931683)
chr6 (196-252)||(21419308-21419364)
chr6 (287-333)||(21424503-21424549)
chr6 (17-123)||(29743790-29743896)
chr6 (17-123)||(33228891-33228997)
chr6 (199-256)||(10026140-10026197)
chr6 (17-187)||(10231806-10231975)
chr6 (87-184)||(13838376-13838472)
chr6 (196-256)||(10027124-10027184)
chr6 (194-256)||(33595608-33595670)
chr6 (200-260)||(3218152-3218212)
chr6 (188-256)||(3922827-3922895)
[»] chr2 (29 HSPs)
chr2 (17-184)||(45419088-45419254)
chr2 (17-190)||(17444528-17444701)
chr2 (17-190)||(41251121-41251294)
chr2 (17-155)||(45121714-45121851)
chr2 (17-198)||(7072016-7072196)
chr2 (35-174)||(18829380-18829518)
chr2 (17-184)||(35963197-35963363)
chr2 (17-190)||(6403291-6403464)
chr2 (17-123)||(18982096-18982202)
chr2 (17-123)||(31581175-31581281)
chr2 (17-184)||(4554689-4554854)
chr2 (29-184)||(32126683-32126837)
chr2 (17-123)||(2957700-2957806)
chr2 (17-123)||(12756393-12756499)
chr2 (17-184)||(2286295-2286460)
chr2 (17-184)||(26162198-26162364)
chr2 (28-187)||(26591559-26591716)
chr2 (17-123)||(42442491-42442597)
chr2 (17-122)||(37621618-37621723)
chr2 (197-256)||(8322471-8322530)
chr2 (17-122)||(17373394-17373500)
chr2 (17-102)||(26238446-26238531)
chr2 (65-152)||(8058871-8058957)
chr2 (193-256)||(27360410-27360473)
chr2 (196-256)||(30337717-30337777)
chr2 (198-256)||(17846007-17846065)
chr2 (199-256)||(30337424-30337481)
chr2 (51-123)||(816613-816685)
chr2 (37-101)||(25391505-25391568)
[»] scaffold0134 (1 HSPs)
scaffold0134 (17-185)||(17812-17978)
[»] scaffold0002 (2 HSPs)
scaffold0002 (17-190)||(479944-480117)
scaffold0002 (196-256)||(330194-330254)
[»] scaffold0041 (1 HSPs)
scaffold0041 (17-184)||(53412-53578)
[»] scaffold0831 (1 HSPs)
scaffold0831 (16-157)||(3382-3521)
[»] scaffold0495 (1 HSPs)
scaffold0495 (17-187)||(8526-8695)
[»] scaffold0311 (1 HSPs)
scaffold0311 (196-256)||(12885-12945)
[»] scaffold0029 (1 HSPs)
scaffold0029 (196-256)||(136913-136973)
[»] scaffold0347 (2 HSPs)
scaffold0347 (199-260)||(11940-12001)
scaffold0347 (198-255)||(12223-12280)


Alignment Details
Target: chr7 (Bit Score: 154; Significance: 1e-81; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 49010239 - 49010420
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  49010239 aaaacttcattgtgaagattcttattatgttctaaccatgcttataaaattagggaacgaaatttgacctgtgagtatacgcttattaggaacaaaattt 49010338  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgcaaattgttttta 198  Q
    |||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  49010339 caatttttgcacgtttttgtttaaaaataaaaataaatagaatcgtcattgaaatgctataaaactttgcaaatcgttttta 49010420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 197 - 256
Target Start/End: Complemental strand, 29706936 - 29706877
Alignment:
Q  197 taggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29706936 taggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 29706877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 37001902 - 37001736
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||| ||||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  37001902 aaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 37001803  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||| |||  ||||| | |||||||| || || | | |||||||||| |||||||    
T  37001802 caa-ttttgcacattttggttgaaaaatcataataaatttaaacgacttcgaaatgctatgaaacttt 37001736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 38638044 - 38637878
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||| ||||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  38638044 aaaaattcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 38637945  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||| |||  ||||| | |||||||| || || | | |||||||||| |||||||    
T  38637944 caa-ttttgcacgttttggttgaaaaatcataataaatttaaacgacttcgaaatgctatgaaacttt 38637878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 43184130 - 43183964
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||| ||||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  43184130 aaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 43184031  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||| |||  ||||| | |||||||| || || | | |||||||||| |||||||    
T  43184030 caa-ttttgcacgttttggttgaaaaatcataataaatttaaacgacttcgaaatgctatgaaacttt 43183964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 190
Target Start/End: Complemental strand, 14776767 - 14776594
Alignment:
Q  17 aaaacttcattgtgaa-gattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 115  Q
    |||| ||||||||||| | ||||||| || |||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||    
T  14776767 aaaatttcattgtgaatgtttcttatcatattctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatt 14776668  T
Q  116 tcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgcaaat 190  Q
    |||| |||||||| |||  |||  ||||| |||||||||| || || | |||||||||||| ||||||| |||||    
T  14776667 tcaa-ttttgcacgtttcagttgaaaaattaaaataaatttaaacgactttgaaatgctatgaaactttacaaat 14776594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 3113782 - 3113616
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||| | ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  3113782 aaaatttcattgtgaaggttcttgtcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 3113683  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||  |||  ||||| |||||||||| || || | | || ||||||| |||||||    
T  3113682 caa-ttttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgatatgctatgaaacttt 3113616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 5555969 - 5556135
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||| | ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  5555969 aaaatttcattgtgaaggttcttgtcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 5556068  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||  |||  ||||| |||||||||| || || | |||| ||| ||| |||||||    
T  5556069 caa-ttttgcacgtttcagttgaaaaatcaaaataaatttaaacgactttgatatgttatgaaacttt 5556135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 8867393 - 8867227
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||| ||||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  8867393 aaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 8867294  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||| |||  ||||| | ||||||||  | || | | |||||||||| |||||||    
T  8867293 caa-ttttgcacgttttggttgaaaaatcataataaattttaacgacttcgaaatgctatgaaacttt 8867227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 26625250 - 26625416
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||| ||||||| ||||||| ||||||||  ||||| || || |||||||||| |||||| ||  ||||||||||||||||  ||||||||||||    
T  26625250 aaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttaacttgtgagtatacgcttacgcggaacaaaattt 26625349  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||| |||  ||||| | |||||||| || |  | | |||||||||| |||||||    
T  26625350 caa-ttttgcacgttttggttgaaaaatcataataaatttaaacaacttcgaaatgctatgaaacttt 26625416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 33686076 - 33686234
Alignment:
Q  25 attgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaattttt 124  Q
    ||||||||||||||||| ||||||||  ||||| || || | |||||||| |||||||||  ||||||||||||||||  |||||||||||| || ||||    
T  33686076 attgtgaagattcttatcatgttctagtcatgcctacaaaagtagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattttaa-tttt 33686174  T
Q  125 gcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    |||  |||| |||  ||||| |||||||||| || || | |  ||||||||| |||||||    
T  33686175 gcatgttttggttgaaaaatcaaaataaatttaaacgacttcaaaatgctatgaaacttt 33686234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 40919683 - 40919517
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||| ||||||| ||||||| ||| ||||  ||||| || || |||||||||| |||||||||  |||||||||| |||||  ||||||||||||    
T  40919683 aaaatttcactgtgaaggttcttatcatgctctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacacttacgcggaacaaaattt 40919584  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||| |||  ||||| | |||||||| || || | | |||||||||| |||||||    
T  40919583 caa-ttttgcacgttttggttgaaaaatcataataaatttaaacgacttcgaaatgctatgaaacttt 40919517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 7003230 - 7003336
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||||| ||||||||  ||||| || || |||||||||| ||| |||||  || |||||||||||||  ||||||||||||    
T  7003230 aaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaacttgacttgttagtatacgcttacacggaacaaaattt 7003329  T
Q  117 caatttt 123  Q
    |||||||    
T  7003330 caatttt 7003336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 7049101 - 7049207
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||||| ||||||||  ||||| || || |||||||||| ||| |||||  || |||||||||||||  ||||||||||||    
T  7049101 aaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaacttgacttgttagtatacgcttacacggaacaaaattt 7049200  T
Q  117 caatttt 123  Q
    |||||||    
T  7049201 caatttt 7049207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 198 - 252
Target Start/End: Original strand, 29701543 - 29701597
Alignment:
Q  198 aggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcct 252  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  29701543 aggcaaaattacacaaatggtcctataacttatttttaggtaacgttttcgtcct 29701597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 8722917 - 8722827
Alignment:
Q  107 aacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgcaaattgttttta 198  Q
    ||||||||||||||||| ||||  ||| |||  |||||||||||||||||||||||  | |||||||||| |||||||||||||| ||||||    
T  8722917 aacaaaatttcaatttt-gcacggtttggttgaaaaataaaaataaattgaatcgtattcgaaatgctatgaaactttgcaaattattttta 8722827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 36631323 - 36631488
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||  ||||||| ||||||||  ||||| || || ||||| |||| ||||||| |  ||||||||||||||||  ||||||||||||    
T  36631323 aaaatttcattgtgaaagttcttatcatgttctagtcatgcctacaaaattagagaactaaatttg-cttgtgagtatacgcttacgcggaacaaaattt 36631421  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||  |||  ||||| |||||||||| || || | | |||||||||| |||||||    
T  36631422 caa-ttttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgctatgaaacttt 36631488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 38 - 187
Target Start/End: Original strand, 23582494 - 23582642
Alignment:
Q  38 ttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgtt 137  Q
    |||| ||||||||||||||| || || |||||  ||| |||||||||| |||| ||||| |||||| ||||||||||| ||| ||| |||  |||| |||    
T  23582494 ttatgatgttctaaccatgcctaaaaaattagataacaaaatttgacccgtgattatactcttactcggaacaaaattgcaa-tttagcaagttttagtt 23582592  T
Q  138 ttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgca 187  Q
      ||||| ||||||||| |||  ||| ||||| ||||| |||||||||||    
T  23582593 gaaaaattaaaataaatagaaatgtctttgaattgctacaaaactttgca 23582642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 8394632 - 8394797
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| ||||| |||||| ||||||| ||||||||  ||||| || || |||||||||| ||||||  |  ||||||||||||||||  ||||||||||||    
T  8394632 aaaatttcatcgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttt-cttgtgagtatacgcttacgcggaacaaaattt 8394730  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| ||| |||| |||  |||  ||||| |||||||||| || || | | |||||||||| |||||||    
T  8394731 caa-tttggcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgctatgaaacttt 8394797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 184
Target Start/End: Original strand, 36658721 - 36658839
Alignment:
Q  65 attagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtca 164  Q
    |||||||||  |||||| ||  ||||||||||||||||  ||||||||||||||| |||||||| |||| |||  ||||| |||||||||| || || |     
T  36658721 attagggaattaaatttcacttgtgagtatacgcttacgcggaacaaaatttcaa-ttttgcacgttttggttgaaaaatcaaaataaatttaaacgact 36658819  T
Q  165 ttgaaatgctataaaacttt 184  Q
    | |||||||||| |||||||    
T  36658820 tcgaaatgctatgaaacttt 36658839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 11020691 - 11020585
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| ||| |||||||| ||||||| ||  ||||  ||||| || ||||||||||||| |||||||||   ||| |||||||||||  ||||||||||||    
T  11020691 aaaatttcgttgtgaaggttcttatcattgtctagtcatgcctacaagattagggaactaaatttgacttatgattatacgcttacgcggaacaaaattt 11020592  T
Q  117 caatttt 123  Q
    |||||||    
T  11020591 caatttt 11020585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 31894257 - 31894319
Alignment:
Q  198 aggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttattttt 260  Q
    ||||||||||||| |||| ||||| ||||||| |||||||||||  |||||||||||||||||    
T  31894257 aggcaaaattacacaaatagtcccttaacttaattttaggtaacactttcgtcctttattttt 31894319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 34388742 - 34388636
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||| ||||||| ||||||| |||||| |  ||||| || || |||||||||| |||||||||  |||| |||| ||||||  ||||||||||||    
T  34388742 aaaatttcactgtgaaggttcttatcatgttccagtcatgcctacaaaattagggaactaaatttgacttgtgaatatatgcttacgcggaacaaaattt 34388643  T
Q  117 caatttt 123  Q
    |||||||    
T  34388642 caatttt 34388636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 20606130 - 20606235
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| ||||| |||||| ||||||| ||||||||||||||| || |  ||||   |||||||||||| | || |||||| ||||||| |||||||||||     
T  20606130 aaaatttcatggtgaaggttcttatcatgttctaaccatgcctacagaattatataacgaaatttgatccgtcagtatatgcttactcggaacaaaattg 20606229  T
Q  117 caattt 122  Q
    ||||||    
T  20606230 caattt 20606235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 260
Target Start/End: Original strand, 44307603 - 44307672
Alignment:
Q  191 tgtttttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttattttt 260  Q
    |||||| ||||||||||||| || | ||||| ||||||| |||||||||||  |||||||||||||||||    
T  44307603 tgttttaaggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttattttt 44307672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 289 - 333
Target Start/End: Complemental strand, 29706781 - 29706737
Alignment:
Q  289 ttaactttatgttcatcttctccaatgttcacacaagcttcttct 333  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||    
T  29706781 ttaacgttatgttcatcttctctaatgttcacacaagcttcttct 29706737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 31252394 - 31252295
Alignment:
Q  87 gtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgc 186  Q
    |||| ||||||||| || ||||||||||| ||||||  |||| ||||  ||  ||||||||||||||||||| | ||||||||||| ||| |||||||||    
T  31252394 gtgaatatacgcttgctcggaacaaaattgcaattta-gcacgttttgattcaaaaataaaaataaattgaaacatcattgaaatgttatgaaactttgc 31252296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 115
Target Start/End: Complemental strand, 13072522 - 13072424
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 115  Q
    |||| ||||| |||||| ||||||| || |||||| ||| | |  || ||||| |||| |||||||||| |||||||||||||||||  ||||||||||    
T  13072522 aaaatttcatggtgaaggttcttatgatattctaaacatacctccaaaattagagaacaaaatttgacccgtgagtatacgcttactctgaacaaaatt 13072424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 31894601 - 31894539
Alignment:
Q  198 aggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttattttt 260  Q
    ||||||||||||| || | ||||| ||||||| |||||| |||| ||||||||||||||||||    
T  31894601 aggcaaaattacacaattagtcccttaacttaattttagataacattttcgtcctttattttt 31894539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 1511190 - 1511251
Alignment:
Q  199 ggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttattttt 260  Q
    |||||||||||| || | ||||| ||||||| ||||||||||  ||||||||||||||||||    
T  1511190 ggcaaaattacacaattagtcccttaacttaattttaggtaatattttcgtcctttattttt 1511251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 256
Target Start/End: Complemental strand, 1511538 - 1511475
Alignment:
Q  193 tttttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    |||||||||||||||||| || | ||||| |||||||  ||||||||||  |||||||||||||    
T  1511538 tttttaggcaaaattacacaattagtcccttaacttaaatttaggtaacactttcgtcctttat 1511475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 197 - 256
Target Start/End: Original strand, 10878623 - 10878682
Alignment:
Q  197 taggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    |||||||||||||| || | ||||| ||||||| |||||||||||  |||||||||||||    
T  10878623 taggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttat 10878682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 28408591 - 28408529
Alignment:
Q  194 ttttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    ||||||||||||||||| || | ||||| ||||||  |||||||||||  |||||||||||||    
T  28408591 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 28408529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 20609434 - 20609542
Alignment:
Q  28 gtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgca 127  Q
    |||||| |||||||  |||||||||||||| || |  ||||   |||| ||||||||| ||||||||||||||| | |||| |||||| | | |||||||    
T  20609434 gtgaaggttcttatcttgttctaaccatgcctacagaattatataacggaatttgacccgtgagtatacgcttattcggaaaaaaattgcta-ttttgca 20609532  T
Q  128 cctttttgtt 137  Q
    | ||||||||    
T  20609533 cgtttttgtt 20609542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 3e-30; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 76 - 187
Target Start/End: Original strand, 8257407 - 8257517
Alignment:
Q  76 aaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgcta 175  Q
    |||||||| | ||||||||||||||||||||||||||||||||| |||||||| |||| |||  ||||||||||||||||||| |||| |||||||||||    
T  8257407 aaatttgatctgtgagtatacgcttactaggaacaaaatttcaa-ttttgcacgttttggttgaaaaataaaaataaattgaaacgtctttgaaatgcta 8257505  T
Q  176 taaaactttgca 187  Q
    | ||||||||||    
T  8257506 tgaaactttgca 8257517  T

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Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 40081401 - 40081235
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  40081401 aaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 40081302  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||  |||  ||||| |||||||||| || || | | |||||||||| |||||||    
T  40081301 caa-ttttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgctatgaaacttt 40081235  T

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Target: chr3; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 155
Target Start/End: Original strand, 27935681 - 27935818
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||||||||||| ||||||||  ||||| || || |||||||||| |||||||||  |||||||||| |||||  ||||||||||||    
T  27935681 aaaatttcattgtgaagattcttataatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacacttacgcggaacaaaattt 27935780  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaatt 155  Q
    ||| |||||||| |||| |||  ||||| ||||||||||    
T  27935781 caa-ttttgcacgttttggttgaaaaatcaaaataaatt 27935818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 6930555 - 6930389
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| ||| |||||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  6930555 aaaatttccttgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 6930456  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||| |||  ||||| | |||||||| || || | | |||||||||| |||||||    
T  6930455 caa-ttttgcacgttttggttgaaaaatcataataaatttaaacgacttcgaaatgctatgaaacttt 6930389  T

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Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 190
Target Start/End: Complemental strand, 6269086 - 6268913
Alignment:
Q  17 aaaacttcattgtgaa-gattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 115  Q
    |||| ||||||||||| | ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||    
T  6269086 aaaatttcattgtgaatgtttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatt 6268987  T
Q  116 tcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgcaaat 190  Q
    |||| |||||||| |||  |||  ||||| |||||||||| || || | | |||||||||| ||||||| |||||    
T  6268986 tcaa-ttttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgctatgaaactttacaaat 6268913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 190
Target Start/End: Complemental strand, 22968104 - 22967931
Alignment:
Q  17 aaaacttcattgtgaa-gattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 115  Q
    |||| ||||||||||| | ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||    
T  22968104 aaaatttcattgtgaatgtttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatt 22968005  T
Q  116 tcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgcaaat 190  Q
    |||| |||||||| |||  |||  ||||| |||||||||| || || | | |||||||||| ||||||| |||||    
T  22968004 tcaa-ttttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgctatgaaactttacaaat 22967931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 29564816 - 29564674
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaac--ga---aatttgaccagtgagtatacgcttactaggaacaa 111  Q
    |||| |||||||||||| ||||||||||||||||||||||| || || |||| |||||  ||   ||||||||  |||||||||||||||||||||||||    
T  29564816 aaaatttcattgtgaaggttcttattatgttctaaccatgcctacaaaattaaggaacatgatttaatttgacatgtgagtatacgcttactaggaacaa 29564717  T
Q  112 aatttcaatttttgcaccttttt-gttttaaaataaaaataaat 154  Q
    ||||| || |||||||| ||||| |||  |||||||||||||||    
T  29564716 aattt-aaattttgcacgtttttggttgaaaaataaaaataaat 29564674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 19565162 - 19565056
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||||| ||||||||| ||||| || || ||||| |||| |||||||||  |||||||||| |||||  ||||||||||||    
T  19565162 aaaatttcattgtgaaggttcttatcatgttctaatcatgcctacaaaattagagaactaaatttgacttgtgagtatacacttacgcggaacaaaattt 19565063  T
Q  117 caatttt 123  Q
    |||||||    
T  19565062 caatttt 19565056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 5135793 - 5135959
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||||| ||||| ||  ||||| ||  | | |||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  5135793 aaaatttcattgtgaaggttcttatcatgttatagtcatgcctacgaaaatagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 5135892  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||| |||  ||||| |||||||||| ||  | | | |||||||||| |||||||    
T  5135893 caa-ttttgcacgttttggttgaaaaatcaaaataaatttaaatgacttcgaaatgctatgaaacttt 5135959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 11017931 - 11017765
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||| ||||||| ||||||| ||| ||||  ||||| || || |||||||||| |||||||||  || |||||||||||||  ||||||||||||    
T  11017931 aaaatttcactgtgaaggttcttatcatgctctagtcatgcctacaaaattagggaactaaatttgacttgtaagtatacgcttacgcggaacaaaattt 11017832  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||| |||  ||||| | |||||||| || || | | |||||||||| |||||||    
T  11017831 caa-ttttgcacgttttggttaaaaaatcataataaatttaaacgacttcgaaatgctatgaaacttt 11017765  T

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Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 45183486 - 45183651
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||| ||||||| ||||||| ||||| ||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  45183486 aaaatttcactgtgaaggttcttatcatgttttagtcatgcctacaa-attagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 45183584  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||| |||  ||||| | |||||||| || || | | |||||||||| |||||||    
T  45183585 caa-ttttgcacgttttggttgaaaaatcataataaatttaaacgacttcgaaatgctatgaaacttt 45183651  T

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Target: chr3; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 17 - 190
Target Start/End: Original strand, 39772297 - 39772470
Alignment:
Q  17 aaaacttcattgtgaagattc-ttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 115  Q
    |||| |||||||||||  ||| |||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||    
T  39772297 aaaatttcattgtgaatgttccttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatt 39772396  T
Q  116 tcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgcaaat 190  Q
    |||| |||||||| |||  |||  ||||| |||||||||| || ||   | |||||||||| ||||||| |||||    
T  39772397 tcaa-ttttgcacgtttcagttgaaaaatcaaaataaatttaaacgatttcgaaatgctatgaaactttacaaat 39772470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 45336379 - 45336485
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||| ||| ||||||| ||||||||| ||||| || || ||| |||||| |||||||||  |||||||||| |||||  ||||||||||||    
T  45336379 aaaatttcattgtaaaggttcttatcatgttctaatcatgcctacaaaatttgggaactaaatttgacttgtgagtatacacttacgcggaacaaaattt 45336478  T
Q  117 caatttt 123  Q
    |||||||    
T  45336479 caatttt 45336485  T

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Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 19390653 - 19390760
Alignment:
Q  17 aaaacttcattgtgaagatt-cttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 115  Q
    |||| |||||||||||| || ||||| ||||||||  ||||| || || |||||| ||| |||||||||  ||||||||||||||||  |||||||||||    
T  19390653 aaaatttcattgtgaaggtttcttatcatgttctagtcatgcctacaaaattaggaaactaaatttgactggtgagtatacgcttacgcggaacaaaatt 19390752  T
Q  116 tcaatttt 123  Q
    ||||||||    
T  19390753 tcaatttt 19390760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 33041457 - 33041561
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||| ||||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||| |||  |||||||||||  ||||||||||||    
T  33041457 aaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacctgtg--tatacgcttacgcggaacaaaattt 33041554  T
Q  117 caatttt 123  Q
    |||||||    
T  33041555 caatttt 33041561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 34083780 - 34083615
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||||| ||||||||  ||||| || || |||||||||| ||||||| |   |||||| ||||||||  ||||||||||||    
T  34083780 aaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttg-cttctgagtacacgcttacgcggaacaaaattt 34083682  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||  |||  ||||| |||||||||| || || | | |||||||||| |||||||    
T  34083681 caa-ttttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgctatgaaacttt 34083615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 6503226 - 6503065
Alignment:
Q  22 ttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatt 121  Q
    |||| ||||||| ||||||| ||  ||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||||| |    
T  6503226 ttcactgtgaaggttcttatcatactctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaa-t 6503128  T
Q  122 tttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||||||| |||| |||  ||||| | |||||||| || || | | |||||| ||| |||||||    
T  6503127 tttgcacgttttggttgaaaaatcataataaatttaaacgacttcgaaatgatatgaaacttt 6503065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 256
Target Start/End: Complemental strand, 52091773 - 52091714
Alignment:
Q  197 taggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    |||||||||||||| |||| |||||| ||||||||||| |||||| ||||||||||||||    
T  52091773 taggcaaaattacacaaatagtcccacaacttattttttggtaactttttcgtcctttat 52091714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 198 - 256
Target Start/End: Original strand, 52090881 - 52090939
Alignment:
Q  198 aggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    ||||||||||| | |||| ||||| |||||||||||||||||||||||| |||||||||    
T  52090881 aggcaaaattatataaatagtcccttaacttatttttaggtaacgttttagtcctttat 52090939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 198
Target Start/End: Complemental strand, 3159388 - 3159292
Alignment:
Q  101 actaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgcaaattgttttta 198  Q
    ||||||||||||||||||||||| |||| |||| |||  ||||||||||||||||||| |||| |  ||||||||| ||| |||| | || |||||||    
T  3159388 actaggaacaaaatttcaatttt-gcacattttggttgaaaaataaaaataaattgaaacgtcttcaaaatgctatgaaaatttgtagatcgttttta 3159292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 3612591 - 3612656
Alignment:
Q  195 tttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttattttt 260  Q
    |||||| ||||||||| || | ||||| ||||||| ||||||||||| ||||||||||||||||||    
T  3612591 tttaggtaaaattacacaattagtcccttaacttaattttaggtaacattttcgtcctttattttt 3612656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 7468824 - 7468899
Alignment:
Q  28 gtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttact 103  Q
    |||||| || ||||||||||||||| |||| ||||| ||||| | ||||||||||| | ||||||||| |||||||    
T  7468824 gtgaaggtttttattatgttctaactatgcctataaaattagaggacgaaatttgaaccgtgagtataagcttact 7468899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 5048383 - 5048446
Alignment:
Q  193 tttttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    |||||||||||||||||| |||| ||| | ||||||| |||||| |||||||||  ||||||||    
T  5048383 tttttaggcaaaattacataaatagtctcttaacttaattttagataacgttttaatcctttat 5048446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 140 - 187
Target Start/End: Complemental strand, 16094693 - 16094646
Alignment:
Q  140 aaaataaaaataaattgaatcgtcattgaaatgctataaaactttgca 187  Q
    ||||||||||||||||||| | || ||||||||||| |||||||||||    
T  16094693 aaaataaaaataaattgaaacttctttgaaatgctacaaaactttgca 16094646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 44506394 - 44506331
Alignment:
Q  194 ttttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttatt 257  Q
    |||| |||||||||||| || |  |||| ||||||| ||||||||||| |||||||||||||||    
T  44506394 ttttgggcaaaattacacaattaatcccttaacttaattttaggtaacattttcgtcctttatt 44506331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 17574372 - 17574434
Alignment:
Q  198 aggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttattttt 260  Q
    ||||||||||||| || | ||||  ||||||| |||||||||||  |||||||||||||||||    
T  17574372 aggcaaaattacacaattcgtccattaacttaattttaggtaacactttcgtcctttattttt 17574434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 260
Target Start/End: Complemental strand, 22975695 - 22975629
Alignment:
Q  194 ttttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttattttt 260  Q
    |||||| |||||||||| || | ||||| ||||||  |||||||||||  |||||||||||||||||    
T  22975695 ttttagacaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttattttt 22975629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 8851801 - 8851861
Alignment:
Q  196 ttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    ||||||||||||||| || | ||||| ||||||  |||||||||||  |||||||||||||    
T  8851801 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 8851861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 256
Target Start/End: Complemental strand, 28830105 - 28830041
Alignment:
Q  192 gtttttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    ||||||||||||||||||| || | ||||| ||||||  |||||| ||||  |||||||||||||    
T  28830105 gtttttaggcaaaattacacaattagtcccttaactttattttagctaacactttcgtcctttat 28830041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 1e-29; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 9175639 - 9175808
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||||||||| ||||||  |||||||||||||||||  ||| || || |||||||||| ||||||||||  |||||| | ||||||||||||||||||||    
T  9175639 aaaacttcatagtgaaggatcttattatgttctaacattgcctacaaaattagggaacaaaatttgacccatgagtaaatgcttactaggaacaaaattt 9175738  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgca 187  Q
     || |||||||| |||| |||  |||||||||  |||| ||||| || | |||||||||||||||||||||    
T  9175739 taa-ttttgcacattttagttgaaaaataaaataaaatagaatcatcttcgaaatgctataaaactttgca 9175808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 42231442 - 42231608
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| ||||| |||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  42231442 aaaatttcatcgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 42231541  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||| |||  ||||| |||||||||| || || | | ||||||||||||||||||    
T  42231542 caa-ttttgcacgttttggttgaaaaatcaaaataaatttaaacgacttcgaaatgctataaaacttt 42231608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 14161555 - 14161495
Alignment:
Q  196 ttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14161555 ttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 14161495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 3648454 - 3648288
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  |||||||||| |||||  ||||||||||||    
T  3648454 aaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacacttacgcggaacaaaattt 3648355  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||| |||  ||||| |||||||||| || || | |||||||| ||| |||||||    
T  3648354 caa-ttttgcacgttttagttgaaaaatcaaaataaatttaaacgactttgaaatgttatgaaacttt 3648288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 9877725 - 9877891
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||| ||||||  ||||||||||||    
T  9877725 aaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatatgcttacgcggaacaaaattt 9877824  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||| |||  ||||| |||||||||| || || | | |||||||||| |||||||    
T  9877825 caa-ttttgcacgttttggttgaaaaatcaaaataaatttaaacgacttcgaaatgctatgaaacttt 9877891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 7278528 - 7278634
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  7278528 aaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 7278627  T
Q  117 caatttt 123  Q
    |||||||    
T  7278628 caatttt 7278634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 28 - 186
Target Start/End: Original strand, 19104 - 19262
Alignment:
Q  28 gtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgca 127  Q
    ||||||||||||||  | ||||||||||||  | || |||||||||| |||||||||||||||||||| | ||| | ||||||||||| ||| ||||| |    
T  19104 gtgaagattcttatggtattctaaccatgcaaacaaaattagggaacaaaatttgaccagtgagtatatggttatttggaacaaaattgcaaattttgaa 19203  T
Q  128 cctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgc 186  Q
     ||||| | |  ||||| ||| |||||||| || |  |||||||||||| |||||||||    
T  19204 acttttggatgaaaaatcaaactaaattgagtcatttttgaaatgctatgaaactttgc 19262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 190
Target Start/End: Original strand, 39915021 - 39915194
Alignment:
Q  17 aaaacttcattgtgaa-gattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 115  Q
    |||| ||||||||||| | ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||    
T  39915021 aaaatttcattgtgaatgtttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatt 39915120  T
Q  116 tcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgcaaat 190  Q
    |||| |||||||| |||  |||  ||||| |||||||||| || ||   | |||||||||| ||||||| |||||    
T  39915121 tcaa-ttttgcacgtttcagttgaaaaatcaaaataaatttaaacgatttcgaaatgctatgaaactttacaaat 39915194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 378937 - 379094
Alignment:
Q  25 attgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaattttt 124  Q
    ||||||||| ||||||| ||||||||  ||||| |  || |||||||||  ||||||||||  ||||||||| |||||| ||||||||| |||||||||     
T  378937 attgtgaagtttcttatcatgttctagtcatgcctgcaaaattagggaattaaatttgacctatgagtatacacttactcggaacaaaaattcaatttt- 379035  T
Q  125 gcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    |||| |||| |||  ||||| ||||||||||||| || | | |||||||||| |||||||    
T  379036 gcacgttttggttc-aaaattaaaataaattgaaacgacttcgaaatgctatgaaacttt 379094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 2728855 - 2728689
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||| ||||||| ||||||| ||||||||  ||||| ||||| |||||||||| |||||| ||  |||||||||| |||||   |||||||||||    
T  2728855 aaaatttcactgtgaaggttcttatcatgttctagtcatgcctataaaattagggaactaaatttaacttgtgagtatacacttacgcagaacaaaattt 2728756  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| ||||| || |||| |||  ||||| |||||||||| || || | | |||||||||| |||||||    
T  2728755 caa-ttttgaacgttttggttgaaaaatcaaaataaatttaaacgacttcgaaatgctatgaaacttt 2728689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 16787687 - 16787521
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||| ||||||  ||||||| ||| ||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  16787687 aaaatttcactgtgaaagttcttatcatgctctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 16787588  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||| |||  ||||| | |||||||| || || | | |||||||||| |||||||    
T  16787587 caa-ttttgcacgttttggttgaaaaatcataataaatttaaacgacttcgaaatgctatgaaacttt 16787521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 34136463 - 34136305
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||| ||||||| ||||||| ||| ||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  34136463 aaaatttcactgtgaaggttcttatcatgctctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 34136364  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctat 176  Q
    ||| |||||||| |||| |||  ||||| | |||||||| || || | | ||||||||||    
T  34136363 caa-ttttgcacgttttggttgaaaaatcataataaatttaaacgacttcgaaatgctat 34136305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 4404513 - 4404619
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||| ||| ||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  4404513 aaaatttcactgtaaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 4404612  T
Q  117 caatttt 123  Q
    |||||||    
T  4404613 caatttt 4404619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 198 - 252
Target Start/End: Original strand, 14156163 - 14156217
Alignment:
Q  198 aggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcct 252  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  14156163 aggcaaaattacacaaatggtcctataacttatttttaggtaacgttttcgtcct 14156217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 32540068 - 32539972
Alignment:
Q  88 tgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttg 185  Q
    |||||||| |||||||||||||||||||||||||||  ||  |||| |||  ||||||||||||||||||| |||| | |||||||||| ||||||||    
T  32540068 tgagtatatgcttactaggaacaaaatttcaatttta-catgttttggttgaaaaataaaaataaattgaaacgtcttcgaaatgctatgaaactttg 32539972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 196
Target Start/End: Original strand, 29351894 - 29352045
Alignment:
Q  44 tgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaa 143  Q
    |||||||||||||| || ||  |||||||||  ||||||||   |||||||||| ||||||||||||||||| ||| ||| |||| |||| |||  ||||    
T  29351894 tgttctaaccatgcctacaaagttagggaacataatttgactcatgagtatacgtttactaggaacaaaattgcaa-tttcgcacgttttggttgaaaaa 29351992  T
Q  144 taaaaataaattgaatcgtcattgaaatgctataaaactttgcaaattgtttt 196  Q
    |||||| ||||| || |||| |||||||||||  ||| |||||| ||| ||||    
T  29351993 taaaaacaaattaaaacgtctttgaaatgctacgaaaatttgcagattttttt 29352045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 185
Target Start/End: Complemental strand, 40401156 - 40401001
Alignment:
Q  29 tgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcac 128  Q
    ||||| ||||||| |||||||||| ||||   ||| ||||||||| ||||||||| | ||||||||||||||||| |||| |||||| ||||||| | |     
T  40401156 tgaaggttcttatgatgttctaactatgcccgtaaaattagggaatgaaatttgagctgtgagtatacgcttactcggaataaaattgcaatttt-gtat 40401058  T
Q  129 ctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttg 185  Q
     |||| |||  ||||||||||||||| ||| |||| |  ||||| ||| ||||||||    
T  40401057 gttttggttgaaaaataaaaataaatcgaaacgtcttcaaaatgatatgaaactttg 40401001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 29 - 184
Target Start/End: Original strand, 23402625 - 23402779
Alignment:
Q  29 tgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcac 128  Q
    ||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||| ||||||||||  ||||||||||||||| ||||||||    
T  23402625 tgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagcatacgcttacgcggaacaaaatttcaa-ttttgcac 23402723  T
Q  129 ctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
     |||| |||  ||||| | |||||||| || ||   | |||||||||| |||||||    
T  23402724 gttttggttgaaaaatcataataaatttaaacgatttcgaaatgctatgaaacttt 23402779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 3435759 - 3435917
Alignment:
Q  25 attgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaattttt 124  Q
    ||||||||  ||||||| ||||||||  ||||| || |  |||||||||| |||||||||  ||||||||| ||||||  ||||||||||||| | ||||    
T  3435759 attgtgaatgttcttatcatgttctagtcatgcctacataattagggaactaaatttgacttgtgagtatatgcttacgcggaacaaaatttc-agtttt 3435857  T
Q  125 gcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    || | |||| |||  ||||| |||||||||| || || | |||||||| ||| |||||||    
T  3435858 gcgcgttttggttgaaaaatcaaaataaatttaaacgactttgaaatgttatgaaacttt 3435917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 29727996 - 29727938
Alignment:
Q  65 attagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 123  Q
    |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  29727996 attagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 29727938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 260
Target Start/End: Original strand, 20178363 - 20178432
Alignment:
Q  191 tgtttttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttattttt 260  Q
    |||||| ||||||||||||| || | ||||| ||||||| |||||||||||  |||||||||||||||||    
T  20178363 tgttttaaggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttattttt 20178432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 260
Target Start/End: Original strand, 20223091 - 20223160
Alignment:
Q  191 tgtttttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttattttt 260  Q
    |||||| ||||||||||||| || | ||||| ||||||| |||||||||||  |||||||||||||||||    
T  20223091 tgttttaaggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttattttt 20223160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 157
Target Start/End: Original strand, 33639154 - 33639282
Alignment:
Q  28 gtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgca 127  Q
    ||||| |||| ||| ||||| ||||||||| || || |||||||||| ||||||||   ||||||||| ||||||| |||  |||||| ||||||| |||    
T  33639154 gtgaatattcctataatgttgtaaccatgcctacaaaattagggaacaaaatttgatgtgtgagtatatgcttacttggagaaaaattgcaatttt-gca 33639252  T
Q  128 cctttttgttttaaaataaaaataaattga 157  Q
    | |||| |||  ||||| ||||||||||||    
T  33639253 cgttttggttgaaaaatcaaaataaattga 33639282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 289 - 333
Target Start/End: Complemental strand, 14161397 - 14161353
Alignment:
Q  289 ttaactttatgttcatcttctccaatgttcacacaagcttcttct 333  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||    
T  14161397 ttaacgttatgttcatcttctctaatgttcacacaagcttcttct 14161353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 154
Target Start/End: Complemental strand, 15541868 - 15541743
Alignment:
Q  28 gtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgca 127  Q
    |||||| |||||| |||||||||||||||  || || ||||||||||  ||||||||   |||||||| ||||| |  |||||||| || || |||||||    
T  15541868 gtgaaggttcttactatgttctaaccatgtatacaaaattagggaacataatttgactcctgagtatatgcttaatgtgaacaaaa-ttaaaattttgca 15541770  T
Q  128 cctttttgttttaaaataaaaataaat 154  Q
    | ||||||||  ||||| |||||||||    
T  15541769 catttttgttggaaaattaaaataaat 15541743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 32964170 - 32964064
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    ||||||| || |||||| | ||||| ||||| ||| |||||| | || ||||||||||||||||||||| |||| || | |||||||  |||||||| |     
T  32964170 aaaacttaatggtgaaggtccttatgatgttataaacatgctaacaaaattagggaacgaaatttgacccgtgattaaatgcttactctgaacaaaaatg 32964071  T
Q  117 caatttt 123  Q
    |||||||    
T  32964070 caatttt 32964064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 198
Target Start/End: Complemental strand, 29892198 - 29892039
Alignment:
Q  35 ttcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcaccttttt 134  Q
    ||||||| ||||| ||  |||||||| || ||||| ||| ||||||||||| ||||||||||  |||||   ||||||||| ||||||  |||| ||||     
T  29892198 ttcttatgatgttatatacatgcttagaaaattagagaaagaaatttgacccgtgagtatacatttactcataacaaaattgcaatttc-gcacgttttg 29892100  T
Q  135 gttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgcaaattgttttta 198  Q
    |||  ||||||||||  |||| || | || ||||||||||| |||| |||||||||| ||||||    
T  29892099 gttgaaaaataaaaa--aattaaa-catctttgaaatgctacaaaattttgcaaattcttttta 29892039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 122
Target Start/End: Complemental strand, 35852579 - 35852495
Alignment:
Q  38 ttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaattt 122  Q
    |||| ||||||||||||||| ||||| ||||| |||| |||||| ||  ||||||||  ||||| | ||||||||||| ||||||    
T  35852579 ttatgatgttctaaccatgcctataaaattagagaacaaaattttactcgtgagtatttgcttattcggaacaaaattgcaattt 35852495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 256
Target Start/End: Complemental strand, 14577217 - 14577154
Alignment:
Q  193 tttttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    |||||||||||||||||| || | ||||| ||||||  |||||||||||  |||||||||||||    
T  14577217 tttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 14577154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 184
Target Start/End: Original strand, 17479956 - 17480101
Alignment:
Q  38 ttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgtt 137  Q
    |||| |||||| ||| |||| || || |||||||||| |||||||||  ||||||||| | |||||  ||| |||||| |||||||  ||| |||| |||    
T  17479956 ttatgatgttccaactatgcctacaaaattagggaacaaaatttgactcgtgagtatatgtttactcagaagaaaattgcaatttta-cacattttggtt 17480054  T
Q  138 ttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
      ||||| |||||||||| || | |   |||||||||||||||||||    
T  17480055 gaaaaatcaaaataaattcaagcttttatgaaatgctataaaacttt 17480101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 257
Target Start/End: Original strand, 30928309 - 30928371
Alignment:
Q  195 tttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttatt 257  Q
    ||||| |||||||||| || | ||||| ||||||| ||||||||||| |||| ||||||||||    
T  30928309 tttagacaaaattacacaattagtcccttaacttaattttaggtaacatttttgtcctttatt 30928371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 35483052 - 35482990
Alignment:
Q  194 ttttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    ||||||||||||||||| || | ||||| ||||||  |||||||||||  |||||||||||||    
T  35483052 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 35482990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 258
Target Start/End: Complemental strand, 17844224 - 17844167
Alignment:
Q  201 caaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttattt 258  Q
    |||||||||| || | ||||| ||||||| |||||||||||  |||||||||||||||    
T  17844224 caaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttattt 17844167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 30928658 - 30928601
Alignment:
Q  199 ggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    |||||||||||| || | ||||| ||||||| |||||||||||  |||||||||||||    
T  30928658 ggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttat 30928601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 40470203 - 40470118
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttac 102  Q
    |||| ||||||||||| |||||||| ||||| ||  ||||| || || |||||||||| ||||||| |  |||| |||||||||||    
T  40470203 aaaatttcattgtgaatattcttatcatgttttagtcatgcctacaaaattagggaactaaatttgccttgtgattatacgcttac 40470118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 27912446 - 27912386
Alignment:
Q  196 ttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    ||||||||||||||| || | ||||| ||||||  |||||||||||  |||||||||||||    
T  27912446 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 27912386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 27958865 - 27958805
Alignment:
Q  196 ttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    ||||||||||||||| || | ||||| ||||||  |||||||||||  |||||||||||||    
T  27958865 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 27958805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 32540126 - 32540086
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgc 57  Q
    |||| |||||| ||||| |||||||||||||||||||||||    
T  32540126 aaaatttcattttgaaggttcttattatgttctaaccatgc 32540086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 190
Target Start/End: Complemental strand, 41971919 - 41971746
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||||| ||||||||  ||||| || || |||||||||  |||||||||| ||||||||||||||||   |||||||||||    
T  41971919 aaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaattaaatttgacctgtgagtatacgcttacgctgaacaaaattt 41971820  T
Q  117 caatttttgcaccttttt-gttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgcaaat 190  Q
    ||| |||||||| ||||| |||  ||||| |||||||||| || || | |||||||||||||||||||| |||||    
T  41971819 caa-ttttgcacgtttttggttgaaaaatcaaaataaatttaaacgactttgaaatgctataaaactttacaaat 41971746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 3829492 - 3829659
Alignment:
Q  22 ttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatt 121  Q
    |||||||||||| ||||||| ||||||||  ||||| || ||  ||||||||| |||||||||  ||||||||||||||||  ||||||||||||||| |    
T  3829492 ttcattgtgaaggttcttatcatgttctagtcatgcctacaaagttagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaa-t 3829590  T
Q  122 tttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgcaaat 190  Q
    ||||||| |||| |||  ||||| |||||||||| || || | | |||||||||| ||||||| |||||    
T  3829591 tttgcacgttttggttgaaaaatcaaaataaatttaaacgacttcgaaatgctatgaaactttacaaat 3829659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 11958011 - 11957845
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||||| ||||||||| ||||| || || ||||| |||   ||||||||  |||||||||||||||   |||||||||||     
T  11958011 aaaatttcattgtgaaggttcttatcatgttctaatcatgcctagaaaattagtgaattgaatttgacttgtgagtatacgcttatgcggaacaaaattg 11957912  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| ||||||||  ||||| |||||||||| || || | | |||||||||| |||||||    
T  11957911 caa-ttttgcacgtttttgttgaaaaatcaaaataaatttaaacgacttcgaaatgctatgaaacttt 11957845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 32981709 - 32981551
Alignment:
Q  25 attgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaattttt 124  Q
    ||||||||| ||||||| ||||||||  ||||| || || ||| |||||| |||||||||  ||||||| | ||||||  ||||||||||||||| ||||    
T  32981709 attgtgaaggttcttatcatgttctagtcatgcctacaaaatttgggaactaaatttgacttgtgagtaaatgcttacgcggaacaaaatttcaa-tttt 32981611  T
Q  125 gcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    |||| ||||||||  ||||| |||||||||| || || | | |||||||||| |||||||    
T  32981610 gcacgtttttgttgaaaaatcaaaataaatttaaacgacttcgaaatgctatgaaacttt 32981551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 35908033 - 35908199
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||| ||||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  35908033 aaaatttcactgtgaaggttcttatcatgttctagtcatgcatacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 35908132  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||| |||  ||||| | |||||||| || ||   | |||||||||| |||||||    
T  35908133 caa-ttttgcacgttttggttgaaaaatcataataaatttaaacgatttcgaaatgctatgaaacttt 35908199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 7433927 - 7434033
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||| | ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  7433927 aaaatttcattgtgaaggttcttgtcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 7434026  T
Q  117 caatttt 123  Q
    |||||||    
T  7434027 caatttt 7434033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 32944413 - 32944499
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttact 103  Q
    |||||||||| |||||  ||||||| ||||||||| ||||||||||| |||||||||| |||||||| ||||||||||| |||||||    
T  32944413 aaaacttcatggtgaatgttcttatgatgttctaagcatgcttataaaattagggaacaaaatttgatcagtgagtatatgcttact 32944499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 42310601 - 42310495
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  | ||||||||||    
T  42310601 aaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcgaaacaaaattt 42310502  T
Q  117 caatttt 123  Q
    |||||||    
T  42310501 caatttt 42310495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 17445799 - 17445965
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||| ||||| ||||||| ||||||||  ||||| || || |||| ||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  17445799 aaaatttcattatgaaggttcttatcatgttctagtcatgcctacaaaattaaggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 17445898  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||  |||| |||  ||||| |||||||||| || || | | |||||| ||| |||||||    
T  17445899 caa-ttttgcaagttttggttgaaaaatcaaaataaatttaaacgacttcgaaatgttatgaaacttt 17445965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 23313500 - 23313606
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||   |||||||||||||||   |||||||||||    
T  23313500 aaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttatgagtatacgcttacgcagaacaaaattt 23313599  T
Q  117 caatttt 123  Q
    |||||||    
T  23313600 caatttt 23313606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 7350293 - 7350228
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttg 82  Q
    |||| ||||| |||||||||||||| || ||||||||||||||| || ||||| ||||||||||||    
T  7350293 aaaatttcatggtgaagattcttatgatattctaaccatgcttacaaaattagtgaacgaaatttg 7350228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 158
Target Start/End: Original strand, 28463490 - 28463582
Alignment:
Q  65 attagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattgaa 158  Q
    |||||||||  || ||||||| ||||||||||||||| | ||||||||||||||| |||||||  |||| |||  ||||| |||||||||||||    
T  28463490 attagggaattaattttgacctgtgagtatacgcttattcggaacaaaatttcaa-ttttgcatgttttggttgaaaaatcaaaataaattgaa 28463582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 12115300 - 12115240
Alignment:
Q  196 ttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    ||||||||||||||| || | ||||| ||||||| ||||||||||| ||||||||||||||    
T  12115300 ttaggcaaaattacacaattagtcccttaacttaattttaggtaacattttcgtcctttat 12115240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 115
Target Start/End: Complemental strand, 5715460 - 5715373
Alignment:
Q  28 gtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 115  Q
    |||||| ||||||| ||||| ||||||||| || || ||||  |||| ||||||||||||||| ||||  |||||| |||||||||||    
T  5715460 gtgaagtttcttatgatgttttaaccatgcctacaaaattatagaacaaaatttgaccagtgaatatatacttactcggaacaaaatt 5715373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 42412370 - 42412464
Alignment:
Q  28 gtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 123  Q
    |||||||||||||| ||||| |||||||   || |  |||||| |||||||||||||| |||||||||||| || | ||||||||||| |||||||    
T  42412370 gtgaagattcttatgatgttttaaccatatctacagaattaggaaacgaaatttgacctgtgagtatacgc-tattcggaacaaaattgcaatttt 42412464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 18716396 - 18716322
Alignment:
Q  29 tgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttact 103  Q
    ||||| ||||||| ||||||||||||||  ||||| |||||||||  |||||||||| |||| |||| |||||||    
T  18716396 tgaaggttcttatgatgttctaaccatgtctataaaattagggaataaaatttgacccgtgaatatatgcttact 18716322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 197 - 260
Target Start/End: Original strand, 7113863 - 7113926
Alignment:
Q  197 taggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttattttt 260  Q
    |||||||||||||| || | ||||| ||||||  |||||||||||  |||||||||||||||||    
T  7113863 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttattttt 7113926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 19897170 - 19897233
Alignment:
Q  193 tttttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    ||||| |||||||||| | || | ||||| ||||||| ||||||||||| ||||||||||||||    
T  19897170 ttttttggcaaaattatacaattagtcccttaacttaattttaggtaacattttcgtcctttat 19897233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 40290128 - 40290073
Alignment:
Q  198 aggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctt 253  Q
    ||||||||||||| || | ||||| ||||||| ||||||||||| |||||||||||    
T  40290128 aggcaaaattacataattagtcccttaacttaattttaggtaacattttcgtcctt 40290073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 17611775 - 17611713
Alignment:
Q  194 ttttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    ||||||||||||||||| || | ||||| ||||||  |||||||||||  |||||||||||||    
T  17611775 ttttaggcaaaattacataattagtcccttaactttattttaggtaacactttcgtcctttat 17611713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 260
Target Start/End: Complemental strand, 25780239 - 25780173
Alignment:
Q  194 ttttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttattttt 260  Q
    ||||||| ||||||||| || | ||||| ||||||  |||||||||||  |||||||||||||||||    
T  25780239 ttttaggtaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttattttt 25780173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 123
Target Start/End: Original strand, 3604778 - 3604863
Alignment:
Q  38 ttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 123  Q
    |||| ||||||||||||||| || || |||||||||  ||||||||||  ||||||||  |||||| | ||||||||  |||||||    
T  3604778 ttatgatgttctaaccatgcctacaaaattagggaataaaatttgacccttgagtatatacttactcgaaacaaaatagcaatttt 3604863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 33490211 - 33490296
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttac 102  Q
    |||| |||||||||||| || |||| ||||||||  ||||| || || |||||||||| |||||||||  | | ||||||||||||    
T  33490211 aaaatttcattgtgaaggttattatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgcgggtatacgcttac 33490296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 6e-28; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 28876976 - 28876810
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||| ||||||  ||||||||||||    
T  28876976 aaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtataagcttacgcggaacaaaattt 28876877  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||| |||  ||||| |||||||||| || || | |||||||||||| |||||||    
T  28876876 caa-ttttgcacgttttggttgaaaaatcaaaataaatttaaacgactttgaaatgctatgaaacttt 28876810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 3292558 - 3292392
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||| ||||||| ||||||| ||||||||| ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  3292558 aaaatttcactgtgaaggttcttatcatgttctaatcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 3292459  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||| ||| |||| |||  ||||| | |||||||| ||||| | | |||||||||| |||||||    
T  3292458 caa-ttttccacgttttggttgaaaaatcataataaatttaatcgacttcgaaatgctatgaaacttt 3292392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 6236015 - 6236181
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  6236015 aaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 6236114  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||  |||  ||||| |||||||||| || |  | | |||||||||| |||||||    
T  6236115 caa-ttttgcacgtttcagttgaaaaatcaaaataaatttaaaccacttcgaaatgctatgaaacttt 6236181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 6689897 - 6689731
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||| ||||||| ||||||| ||||||||| ||||| || || |||||||||  |||||||||  ||||||||||||||||  ||||||||||||    
T  6689897 aaaatttcactgtgaaggttcttatcatgttctaatcatgcctacaaaattagggaattaaatttgacttgtgagtatacgcttacgcggaacaaaattt 6689798  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||| ||| |||| |||  ||||| | |||||||| ||||| | | |||||||||| |||||||    
T  6689797 caa-ttttccacgttttggttgaaaaatcataataaatttaatcgacttcgaaatgctatgaaacttt 6689731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 10352545 - 10352439
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||||| ||||||||| ||||| || || |||||||||| |||||||||  |||||||||| |||||  ||||||||||||    
T  10352545 aaaatttcattgtgaaggttcttatcatgttctaatcatgcctacaaaattagggaactaaatttgacttgtgagtatacacttacacggaacaaaattt 10352446  T
Q  117 caatttt 123  Q
    |||||||    
T  10352445 caatttt 10352439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 155
Target Start/End: Complemental strand, 29995644 - 29995507
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  |||||||||| |||||  ||||||||||||    
T  29995644 aaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacacttacgcggaacaaaattt 29995545  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaatt 155  Q
    ||| |||||||| |||| |||  ||||| ||||||||||    
T  29995544 caa-ttttgcacgttttggttgaaaaatcaaaataaatt 29995507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 42333436 - 42333270
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||| ||||||| ||||||| ||| ||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  42333436 aaaatttcactgtgaaggttcttatcatgctctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 42333337  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||| |||  ||||| | |||||||| || || | | |||||||||| |||||||    
T  42333336 caa-ttttgcacgttttggttgaaaaatcataataaatttaaacgacttcgaaatgctatgaaacttt 42333270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 190
Target Start/End: Original strand, 13012695 - 13012868
Alignment:
Q  17 aaaacttcattgtgaa-gattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 115  Q
    |||| ||||||||||| | ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||    
T  13012695 aaaatttcattgtgaatgtttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatt 13012794  T
Q  116 tcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgcaaat 190  Q
    |||| |||||||| |||  |||  ||||| |||||||||| || ||   | |||||||||| ||||||| |||||    
T  13012795 tcaa-ttttgcacgtttcagttgaaaaatcaaaataaatttaaacgatttcgaaatgctatgaaactttacaaat 13012868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 190
Target Start/End: Original strand, 20129820 - 20129993
Alignment:
Q  17 aaaacttcattgtgaa-gattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 115  Q
    |||| ||||||||||| | ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||    
T  20129820 aaaatttcattgtgaatgtttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatt 20129919  T
Q  116 tcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgcaaat 190  Q
    |||| |||||||| |||  |||  ||||| |||||||||| || ||   | |||||||||| ||||||| |||||    
T  20129920 tcaa-ttttgcacgtttcagttgaaaaatcaaaataaattaaaacgatttcgaaatgctatgaaactttacaaat 20129993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 190
Target Start/End: Complemental strand, 26438939 - 26438766
Alignment:
Q  17 aaaacttcattgtgaa-gattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 115  Q
    |||| ||||||||||| | ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||    
T  26438939 aaaatttcattgtgaatgtttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatt 26438840  T
Q  116 tcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgcaaat 190  Q
    |||| |||||||| |||  |||  ||||| |||||||||| || ||   | |||||||||| ||||||| |||||    
T  26438839 tcaa-ttttgcacgtttcagttgaaaaatcaaaataaatttaaacgatttcgaaatgctatgaaactttacaaat 26438766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 33136101 - 33135940
Alignment:
Q  22 ttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatt 121  Q
    |||||||||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||   |||||||||| ||||  ||||||||||||||| |    
T  33136101 ttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttatgagtatacgtttacgcggaacaaaatttcaa-t 33136003  T
Q  122 tttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||||||| |||| |||  ||||| ||||||| || || || | |||||||| ||| |||||||    
T  33136002 tttgcacgttttggttgaaaaatcaaaataattttaaacgactttgaaatgatatgaaacttt 33135940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 190
Target Start/End: Complemental strand, 34406944 - 34406771
Alignment:
Q  17 aaaacttcattgtgaa-gattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 115  Q
    |||| ||||||||||| | ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||    
T  34406944 aaaatttcattgtgaatgtttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatt 34406845  T
Q  116 tcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgcaaat 190  Q
    |||| |||||||| |||  |||  ||||| |||||||||| || ||   | |||||||||| ||||||| |||||    
T  34406844 tcaa-ttttgcacgtttcagttgaaaaatcaaaataaatttaaacgatttcgaaatgctatgaaactttacaaat 34406771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 190
Target Start/End: Original strand, 43356411 - 43356584
Alignment:
Q  17 aaaacttcattgtgaa-gattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 115  Q
    |||| ||||||||||| | ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||    
T  43356411 aaaatttcattgtgaatgtttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatt 43356510  T
Q  116 tcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgcaaat 190  Q
    |||| |||||||| |||  |||  ||||| |||||||||| || ||   | |||||||||| ||||||| |||||    
T  43356511 tcaa-ttttgcacgtttcagttgaaaaatcaaaataaatttaaacgatttcgaaatgctatgaaactttacaaat 43356584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 190
Target Start/End: Original strand, 47501280 - 47501453
Alignment:
Q  17 aaaacttcattgtgaa-gattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 115  Q
    |||| ||||||||||| | ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||    
T  47501280 aaaatttcattgtgaatgtttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatt 47501379  T
Q  116 tcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgcaaat 190  Q
    |||| |||||||| |||  |||  ||||| |||||||||| || ||   | |||||||||| ||||||| |||||    
T  47501380 tcaa-ttttgcacgtttcagttgaaaaatcaaaataaatttaaacgatttcgaaatgctatgaaactttacaaat 47501453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 158
Target Start/End: Complemental strand, 29134292 - 29134152
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||  ||||||||||||||||| | ||| || || ||||| |||| ||||||||||  |||||||||   |||||||||||||||||    
T  29134292 aaaatttcattgtgaaatttcttattatgttctaatcttgcctacaaaattagagaacaaaatttgacctatgagtatacaaatactaggaacaaaattt 29134193  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaa 158  Q
    |||||||   || |||| |||  |||||||||||||||||||    
T  29134192 caattttaa-acgttttggttgaaaaataaaaataaattgaa 29134152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 65 - 184
Target Start/End: Complemental strand, 17510841 - 17510723
Alignment:
Q  65 attagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtca 164  Q
    |||||||||| |||||||||  ||||||||||||||||  ||||||||||||||| |||||||| |||  |||  ||||| ||||||||||||| || |     
T  17510841 attagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaa-ttttgcacgtttcagttcaaaaatcaaaataaattgaaacgact 17510743  T
Q  165 ttgaaatgctataaaacttt 184  Q
    | |||||||||| |||||||    
T  17510742 tcgaaatgctatgaaacttt 17510723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 35546458 - 35546623
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||| ||||||| ||||||| ||||| ||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  35546458 aaaatttcactgtgaaggttcttatcatgttttagtcatgcctacaa-attagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 35546556  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||| |||  ||||| | |||||||| || || | | |||||||||| |||||||    
T  35546557 caa-ttttgcacgttttggttgaaaaatcataataaatttaaacgacttcgaaatgctatgaaacttt 35546623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 43143246 - 43143080
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||| ||||||| ||||||| ||| ||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  43143246 aaaatttcactgtgaaggttcttatcatgctctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 43143147  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||| |||  ||||| | ||||||||  | || | | |||||||||| |||||||    
T  43143146 caa-ttttgcacgttttggttgaaaaatcataataaattttaacgacttcgaaatgctatgaaacttt 43143080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 30216395 - 30216301
Alignment:
Q  29 tgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 123  Q
    ||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  30216395 tgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 30216301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 184
Target Start/End: Original strand, 25931225 - 25931381
Alignment:
Q  27 tgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgc 126  Q
    ||||||| ||||||| ||||| ||  ||||| || || |||||||||| |||||||||  ||||| ||||||||||  ||||||||||||||| ||||||    
T  25931225 tgtgaaggttcttatcatgttttagtcatgcctacaaaattagggaactaaatttgacttgtgagaatacgcttacgcggaacaaaatttcaa-ttttgc 25931323  T
Q  127 acctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    || |||  |||  ||||| |||||||||| || || | | |||||||||| |||||||    
T  25931324 acgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgctatgaaacttt 25931381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 48989833 - 48990000
Alignment:
Q  16 aaaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 115  Q
    ||||| |||| ||||||| ||||||| ||||||||  ||||| || || |||||||||  |||||||||  ||| ||||||||||||  |||||||||||    
T  48989833 aaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaattaaatttgacttgtgggtatacgcttacgcggaacaaaatt 48989932  T
Q  116 tcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    |||| ||| |||| |||| |||  ||||| |||||||||| || || | |  ||||||||| |||||||    
T  48989933 tcaa-tttggcacgttttggttgaaaaatcaaaataaatttaaacgacttcaaaatgctatgaaacttt 48990000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 26546943 - 26546856
Alignment:
Q  35 ttcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaattt 122  Q
    ||||||| |||||||||| |||| || || ||||| ||||| ||||||||| |||||||||||||||||  |||||||||| ||||||    
T  26546943 ttcttatgatgttctaacaatgcctacaaaattagagaacggaatttgacccgtgagtatacgcttactcagaacaaaattgcaattt 26546856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 30077297 - 30077191
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||||| ||||| ||| ||||| || || ||| |||||| |||||||||  |||| ||||| |||||  ||||||||||||    
T  30077297 aaaatttcattgtgaaggttcttatcatgttataatcatgcctacaaaatttgggaactaaatttgacttgtgaatatacacttacgcggaacaaaattt 30077198  T
Q  117 caatttt 123  Q
    |||||||    
T  30077197 caatttt 30077191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 190
Target Start/End: Complemental strand, 36381999 - 36381836
Alignment:
Q  25 attgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaattttt 124  Q
    ||||||||| ||||||| ||||||||  ||||| || || |||||||||| ||||||| |  ||||||||||||||||  |||| |||||||||| ||||    
T  36381999 attgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttg-cttgtgagtatacgcttacgcggaataaaatttcaa-tttt 36381902  T
Q  125 gcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgcaaat 190  Q
    |||| |||  |||  ||||| |||||||||| || ||   | |||||||||| ||||||| |||||    
T  36381901 gcacgtttcagttgaaaaatcaaaataaatttaaacgaattcgaaatgctatgaaactttacaaat 36381836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 184
Target Start/End: Complemental strand, 13391061 - 13390943
Alignment:
Q  65 attagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtca 164  Q
    |||||||||| |||||||||  || |||||||||||||  ||||||||||||||| |||||||| |||| |||  ||||| |||| ||||| || || |     
T  13391061 attagggaactaaatttgacttgttagtatacgcttacgcggaacaaaatttcaa-ttttgcacgttttggttgaaaaatcaaaagaaatttaaacgact 13390963  T
Q  165 ttgaaatgctataaaacttt 184  Q
    | |||||||||| |||||||    
T  13390962 tcgaaatgctatgaaacttt 13390943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 21360451 - 21360514
Alignment:
Q  193 tttttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    ||||| |||||||||||| |||| ||||| ||||||| |||||||||||||||| |||||||||    
T  21360451 ttttttggcaaaattacataaatagtcccttaacttaattttaggtaacgttttagtcctttat 21360514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 260
Target Start/End: Complemental strand, 30055555 - 30055488
Alignment:
Q  193 tttttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttattttt 260  Q
    |||||||||||||||||| || | ||||| ||||||| ||||||||||| |||||||||||| |||||    
T  30055555 tttttaggcaaaattacacaattagtcccttaacttaattttaggtaacattttcgtccttttttttt 30055488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 152
Target Start/End: Original strand, 48130491 - 48130617
Alignment:
Q  25 attgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaattttt 124  Q
    ||||||||| ||||||| ||||||||    ||| || || |||||||||| || ||||||  ||||||||||||||||  ||||||||||||||| ||||    
T  48130491 attgtgaaggttcttatcatgttctagtattgcctacaaaattagggaactaattttgacttgtgagtatacgcttacgcggaacaaaatttcaa-tttt 48130589  T
Q  125 gcacctttttgttttaaaataaaaataa 152  Q
    |||| |||| |||  ||||| |||||||    
T  48130590 gcacgttttggttgaaaaatcaaaataa 48130617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 158
Target Start/End: Original strand, 56225820 - 56225950
Alignment:
Q  28 gtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaac-aaaatttcaatttttgc 126  Q
    |||||| ||||| | ||||||||||||||| || || |||| ||||||||||||||||  |||||||| | ||||  | ||| |||||| ||| ||||||    
T  56225820 gtgaaggttcttgtgatgttctaaccatgcctacaaaattatggaacgaaatttgacccatgagtatatgtttacccgaaacgaaaattgcaa-ttttgc 56225918  T
Q  127 acctttttgttttaaaataaaaataaattgaa 158  Q
    || |||| |||  |||||||||||||||||||    
T  56225919 acgttttggttgaaaaataaaaataaattgaa 56225950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 185
Target Start/End: Complemental strand, 13502261 - 13502113
Alignment:
Q  35 ttcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcaccttttt 134  Q
    ||||||| ||||||| | ||||| || || ||||||||| ||||||||| |  || ||||| ||||||| ||||||||||| ||| ||||||| | ||||    
T  13502261 ttcttatgatgttctgagcatgcctacaaaattagggaaggaaatttgatccatgtgtatatgcttacttggaacaaaattgcaa-ttttgca-cgtttt 13502164  T
Q  135 gttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttg 185  Q
    | || ||||  ||| |||||| || | || |||||||||||| ||||||||    
T  13502163 gattgaaaaataaagtaaattaaaacatctttgaaatgctatgaaactttg 13502113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 184
Target Start/End: Original strand, 44157182 - 44157295
Alignment:
Q  70 ggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaa 169  Q
    ||||| |||||||||  ||||||||||||||||  |||| |||||||||| |||||||  |||| |||  ||||| |||||||||| || || | | |||    
T  44157182 ggaactaaatttgacttgtgagtatacgcttacgcggaataaaatttcaa-ttttgcatgttttggttgaaaaatcaaaataaatttaaacgacttcgaa 44157280  T
Q  170 atgctataaaacttt 184  Q
    ||||||| |||||||    
T  44157281 atgctatgaaacttt 44157295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 179
Target Start/End: Complemental strand, 49062614 - 49062453
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| ||||| |||||| ||| ||| || |||||||| ||| |  || | ||| || ||||| |||||| ||||||||||| | ||| ||||| |||||     
T  49062614 aaaatttcatggtgaaggttcatataatattctaaccttgccttcaaaactagtgagcgaaaattgacctgtgagtatacgatcacttggaacgaaattg 49062515  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaa 179  Q
    ||||||| |||| |||| |||  ||||| ||||||||||||  |||| | |||||||||||||    
T  49062514 caatttt-gcacattttagttgaaaaatcaaaataaattgaggcgtcttcgaaatgctataaa 49062453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 30799668 - 30799612
Alignment:
Q  200 gcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    ||||||||||| || | ||||| ||||||| ||||||||||| ||||||||||||||    
T  30799668 gcaaaattacacaattagtcccttaacttaattttaggtaacattttcgtcctttat 30799612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 190
Target Start/End: Original strand, 26449291 - 26449393
Alignment:
Q  87 gtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgc 186  Q
    ||||||||||||||||  ||||||||||||||| |||||||| ||||  ||  ||||  |||||||||| || || | | |||||||||| ||||||| |    
T  26449291 gtgagtatacgcttacgcggaacaaaatttcaa-ttttgcacgttttgattgaaaaaacaaaataaatttaaacgacttcgaaatgctatgaaactttac 26449389  T
Q  187 aaat 190  Q
    ||||    
T  26449390 aaat 26449393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 184
Target Start/End: Original strand, 30110516 - 30110634
Alignment:
Q  65 attagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtca 164  Q
    |||| ||||| |||||||||| |||||||| |||||||   ||| |||||||||| |||||||| |||| |||  ||||| |||||||||| ||  | |     
T  30110516 attaaggaactaaatttgacctgtgagtatgcgcttacgcagaataaaatttcaa-ttttgcacgttttggttgaaaaatcaaaataaatttaaatgact 30110614  T
Q  165 ttgaaatgctataaaacttt 184  Q
    | |||||||||| |||||||    
T  30110615 tcgaaatgctatgaaacttt 30110634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 171
Target Start/End: Original strand, 31853743 - 31853885
Alignment:
Q  28 gtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgca 127  Q
    |||||| ||||||| | ||||||||||||| || || ||||   |||| ||||||||| |||||||||| ||||||  | |||||||| ||| ||| |||    
T  31853743 gtgaaggttcttatgacgttctaaccatgcctacaaaattaaaaaacgtaatttgacccgtgagtatacacttactcagtacaaaattgcaa-tttcgca 31853841  T
Q  128 cctttttgttttaaaataaaaataaattgaatcgtcattgaaat 171  Q
      |||| |||  ||||| ||||||||| ||| |||| |||||||    
T  31853842 tgttttggttgaaaaattaaaataaatagaaacgtctttgaaat 31853885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 37872761 - 37872824
Alignment:
Q  193 tttttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    ||||| |||||||||||| || | ||||| ||||||  ||||||||||| ||||||||||||||    
T  37872761 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacattttcgtcctttat 37872824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 40529651 - 40529698
Alignment:
Q  76 aaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 123  Q
    |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  40529651 aaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 40529698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 260
Target Start/End: Complemental strand, 46143622 - 46143555
Alignment:
Q  193 tttttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttattttt 260  Q
    |||||||||||||||||| || | || || ||||||  |||||||||||  |||||||||||||||||    
T  46143622 tttttaggcaaaattacacaattagtgccttaactttattttaggtaacactttcgtcctttattttt 46143555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 50204702 - 50204643
Alignment:
Q  65 attagggaacgaaatttgaccagtgagtatacgcttactaggaac-aaaatttcaatttt 123  Q
    |||||||||| |||||||||  ||||||||||||||||  ||||| ||||||||||||||    
T  50204702 attagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaaatttcaatttt 50204643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 13294953 - 13294891
Alignment:
Q  194 ttttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    ||||||||||||||||| || | ||||| ||||||  |||||||||||  |||||||||||||    
T  13294953 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 13294891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 256
Target Start/End: Original strand, 25297679 - 25297737
Alignment:
Q  198 aggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    ||||||||||||| || | ||||| ||||||| |||||||||||  |||||||||||||    
T  25297679 aggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttat 25297737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 4038318 - 4038262
Alignment:
Q  65 attagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatt 121  Q
    ||||| |||||||||| |||| ||||||||| | ||||| ||||||||||| |||||    
T  4038318 attagagaacgaaattagacctgtgagtataggtttactcggaacaaaattgcaatt 4038262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 259
Target Start/End: Original strand, 30055208 - 30055268
Alignment:
Q  199 ggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttatttt 259  Q
    |||||||||||| || | ||||| ||||||| |||||||||||  ||| ||||||||||||    
T  30055208 ggcaaaattacacaattagtcccttaacttaattttaggtaacacttttgtcctttatttt 30055268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 42856801 - 42856865
Alignment:
Q  196 ttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttattttt 260  Q
    ||||||||||||||| || | ||||| ||| ||  |||||||||||  |||||||||||||||||    
T  42856801 ttaggcaaaattacacaattagtcccttaattttattttaggtaacactttcgtcctttattttt 42856865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 15959607 - 15959441
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||||| ||||||||  ||||| || || ||| |||||| |||||||||| |||||||||||||||   ||||||||||||    
T  15959607 aaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaatttgggaactaaatttgacctgtgagtatacgcttatgcggaacaaaattt 15959508  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||| |||  ||||| |||||||||| || |  | |||||||||||| |||||||    
T  15959507 caa-ttttgcacgttttggttgaaaaatcaaaataaatttaaacaactttgaaatgctatgaaacttt 15959441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 123
Target Start/End: Original strand, 23034488 - 23034586
Alignment:
Q  25 attgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 123  Q
    ||||||||  ||||||||||||| ||| ||||| || || |||| |||| ||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  23034488 attgtgaaagttcttattatgttataatcatgcctacaaaattaaggaatgaaatttgacctgtgagtatacgcttactaggaacaaaattttaatttt 23034586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 31501375 - 31501214
Alignment:
Q  22 ttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatt 121  Q
    |||||||||| | ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||||| |    
T  31501375 ttcattgtgatggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaa-t 31501277  T
Q  122 tttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||||||| |||| |||  ||||| |||||||||| || |  | | |||||||||| |||||||    
T  31501276 tttgcacgttttggttgaaaaatcaaaataaatttaaacaacttcgaaatgctatgaaacttt 31501214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 13818484 - 13818650
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||| ||    
T  13818484 aaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaactt 13818583  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||   ||  ||||| |||||||||| || || | | |||||||||| |||||||    
T  13818584 caa-ttttgcacgtttcaattgaaaaatcaaaataaatttaaacgacttcgaaatgctatgaaacttt 13818650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 31680872 - 31681038
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||| || |||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  31680872 aaaatttcactgcgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 31680971  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||| |||  ||||| | |||||||| || || | | |||||||||| |||||||    
T  31680972 caa-ttttgcacgttttggttgaaaaatcataataaatttaaacgacttcgaaatgctatgaaacttt 31681038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 33430826 - 33430992
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||| || |||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  33430826 aaaatttcactgcgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 33430925  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||| |||  ||||| | |||||||| || || | | |||||||||| |||||||    
T  33430926 caa-ttttgcacgttttggttgaaaaatcataataaatttaaacgacttcgaaatgctatgaaacttt 33430992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 190
Target Start/End: Complemental strand, 26282978 - 26282805
Alignment:
Q  17 aaaacttcattgtgaa-gattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 115  Q
    |||| ||||||||||| | ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||    
T  26282978 aaaatttcattgtgaatgtttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatt 26282879  T
Q  116 tcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgcaaat 190  Q
    |||| |||||||| |||  |||  ||||| |||||||||| || ||   | |||||||||| ||||||| |||||    
T  26282878 tcaa-ttttgcacgtttcagttgaaaaatcaaaataaatttaaacgatttcgaaatgctatgaaactttacaaat 26282805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 190
Target Start/End: Complemental strand, 36293281 - 36293108
Alignment:
Q  17 aaaacttcattgtgaagatt-cttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 115  Q
    |||| |||||||||||| || ||||| ||||||||  ||||| || || |||||| ||| |||||||||  ||||||||||||||||  |||||||||||    
T  36293281 aaaatttcattgtgaaggtttcttatcatgttctagtcatgcctacaaaattaggaaactaaatttgacttgtgagtatacgcttacgcggaacaaaatt 36293182  T
Q  116 tcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgcaaat 190  Q
    |||| |||||||| |||  |||  ||||| |||||||||| || || | | |||||||||| ||||||| |||||    
T  36293181 tcaa-ttttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgctatgaaactttacaaat 36293108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 192412 - 192517
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||| ||| ||||||| |||||||   ||||| ||||| |||||||||| ||||||||||  |||||||||| ||||| ||||||||||||    
T  192412 aaaatttcattgttaaggttcttatcatgttctcgtcatgcctataaaattagggaactaaatttgacctatgagtatacgtttactcggaacaaaattt 192511  T
Q  117 caattt 122  Q
    ||||||    
T  192512 caattt 192517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 39657191 - 39657022
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgacca---gtgagtatacgcttactaggaacaaaa 113  Q
    |||| |||||||||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||| ||   |||||||||| |||||  |||||||||    
T  39657191 aaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgatcacttgtgagtatacacttacgcggaacaaaa 39657092  T
Q  114 tttcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    |||||| |||||||| |||  |||  ||||| |||||||||| || || | | |||||||||| |||||||    
T  39657091 tttcaa-ttttgcacgtttcagttaaaaaatcaaaataaatttaaacgacttcgaaatgctatgaaacttt 39657022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 16333561 - 16333395
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| ||||||| |||| ||||||| || || ||  |||||||| || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  16333561 aaaatttcattgggaaggttcttatcatattttagtcatgcttacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 16333462  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||  |||  ||||| |||||||||| || || | | || ||||||| |||||||    
T  16333461 caa-ttttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgatatgctatgaaacttt 16333395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 65 - 156
Target Start/End: Complemental strand, 38269034 - 38268944
Alignment:
Q  65 attagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattg 156  Q
    |||||||||| |||||||||| || |||||||||||||| ||||||||||||||| |||||||| |||| |||  ||||| |||||||||||    
T  38269034 attagggaactaaatttgacctgtaagtatacgcttactcggaacaaaatttcaa-ttttgcacgttttggttgaaaaatcaaaataaattg 38268944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 37255123 - 37255216
Alignment:
Q  30 gaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 123  Q
    |||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  37255123 gaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 37255216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 1776036 - 1775871
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||||| ||||||||  ||||| || || ||||| |||  ||||||| |  ||||||||||||||||  ||||||||||||    
T  1776036 aaaatttcattgtgaaggttcttatcatgttctagtcatgcctaaaaaattagagaattaaatttg-cttgtgagtatacgcttacgcggaacaaaattt 1775938  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||  |||  ||||| |||||||||| || || | | |||||||||| |||||||    
T  1775937 caa-ttttgcacgtttgagttgaaaaatcaaaataaatttaaacgacttcgaaatgctatgaaacttt 1775871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 17332281 - 17332115
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||||| ||||||||  ||||| || || |||| ||||| |||||||||  | ||||||| ||||||  ||||||||||||    
T  17332281 aaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattaaggaactaaatttgacttgcgagtatatgcttacgcggaacaaaattt 17332182  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||| |||  ||||| | |||||||| || || | |  ||||||||| |||||||    
T  17332181 caa-ttttgcacgttttggttgaaaaatcataataaatttaaacgacttcaaaatgctatgaaacttt 17332115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 28801712 - 28801791
Alignment:
Q  23 tcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttac 102  Q
    ||||||||||| ||||||| ||||||||  |||||||| || |||||||||| |||||||||  ||||||||||||||||    
T  28801712 tcattgtgaaggttcttatcatgttctagtcatgcttacaaaattagggaactaaatttgacttgtgagtatacgcttac 28801791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 31271911 - 31272018
Alignment:
Q  16 aaaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 115  Q
    |||||||| ||| ||||| |||||||||||||||| |||||  ||  | ||||| |||| || ||||||  |||||||||| ||| ||||||||||||||    
T  31271911 aaaaactttattctgaaggttcttattatgttctagccatggctaccaaattagtgaacaaattttgacttgtgagtatacacttgctaggaacaaaatt 31272010  T
Q  116 tcaatttt 123  Q
    ||||||||    
T  31272011 tcaatttt 31272018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 10034409 - 10034495
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttact 103  Q
    |||| |||||||||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  |||||||||||||||||    
T  10034409 aaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttact 10034495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 12278518 - 12278412
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||| ||||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  |||||||| |||||||  ||||||||||||    
T  12278518 aaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtattcgcttacgcggaacaaaattt 12278419  T
Q  117 caatttt 123  Q
     ||||||    
T  12278418 taatttt 12278412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 123
Target Start/End: Original strand, 36291884 - 36291982
Alignment:
Q  25 attgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 123  Q
    ||||||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||   ||||||||| |||||  |||||||||||||||||||    
T  36291884 attgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttatgagtatacacttacgcggaacaaaatttcaatttt 36291982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 198
Target Start/End: Original strand, 16155510 - 16155683
Alignment:
Q  25 attgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactagg-aacaaaatttcaatttt 123  Q
    ||||||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||| ||  || || |||| ||||| |||    
T  16155510 attgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgctcacacggaaaaaaaaattcaa-ttt 16155608  T
Q  124 tgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgcaaattgttttta 198  Q
    ||||| |||  |||  ||||| |||||||||| || || | | |||||||||| ||||||| || || |||||||    
T  16155609 tgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgctatgaaactttacagatcgttttta 16155683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 190
Target Start/End: Original strand, 39435203 - 39435376
Alignment:
Q  17 aaaacttcattgtgaagatt-cttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 115  Q
    |||| |||||||||||| || ||||| ||||||||  ||| | || || |||||||||| |||||||||  ||| ||||| ||||||  |||||||||||    
T  39435203 aaaatttcattgtgaaggtttcttatcatgttctagtcatacctacaaaattagggaactaaatttgacttgtgggtataagcttacgcggaacaaaatt 39435302  T
Q  116 tcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgcaaat 190  Q
    |||| |||||||  |||  |||  ||||| |||||||||| || || | | |||||||||| ||||||| |||||    
T  39435303 tcaa-ttttgcatgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgctatgaaactttacaaat 39435376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 43069362 - 43069468
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||| ||||| ||||||| ||||||||  ||||  |  || |||||||||| |||||||||  |||||||||| |||||  ||||||||||||    
T  43069362 aaaatttcattttgaaggttcttatcatgttctagtcatgtctgcaaaattagggaactaaatttgacttgtgagtatacacttacgcggaacaaaattt 43069461  T
Q  117 caatttt 123  Q
    |||||||    
T  43069462 caatttt 43069468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 158
Target Start/End: Complemental strand, 30297606 - 30297492
Alignment:
Q  40 attatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgtttt 139  Q
    |||||||||| ||||||| || || |||||||||  |||||||||  ||||||   |||||| ||| ||||||||||||| |||||||| |||| |||      
T  30297606 attatgttctgaccatgcctacaaaattagggaataaaatttgacatgtgagt---cgcttaatagaaacaaaatttcaa-ttttgcacgttttagttgg 30297511  T
Q  140 aaaataaaaataaattgaa 158  Q
    |||| ||||||||||||||    
T  30297510 aaaacaaaaataaattgaa 30297492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 188 - 256
Target Start/End: Complemental strand, 35362274 - 35362206
Alignment:
Q  188 aattgtttttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    |||| |||| ||||||||||||| || | ||||| ||||||| |||||||||||| |||||||||||||    
T  35362274 aattcttttaaggcaaaattacacaattagtcccttaacttaattttaggtaacgctttcgtcctttat 35362206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 27843023 - 27843080
Alignment:
Q  199 ggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    |||||||||||| || | ||||| ||||||| ||||||||||| ||||||||||||||    
T  27843023 ggcaaaattacataattagtcccttaacttaattttaggtaacattttcgtcctttat 27843080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 147
Target Start/End: Original strand, 8788334 - 8788452
Alignment:
Q  28 gtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgca 127  Q
    |||||| ||||||| ||||||||||||||| || || ||| | ||| | ||||||||   |||| ||||||||||| | ||||||||| | | |||||||    
T  8788334 gtgaagtttcttatgatgttctaaccatgcctacaaaattggagaatggaatttgacttatgagaatacgcttactcgaaacaaaattgcca-ttttgca 8788432  T
Q  128 cctttttgttttaaaataaa 147  Q
    | |||| |||| ||||||||    
T  8788433 cattttggtttaaaaataaa 8788452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 197 - 256
Target Start/End: Complemental strand, 15179137 - 15179078
Alignment:
Q  197 taggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    |||||||||||||| || | ||||| ||||||| |||||||||||  |||||||||||||    
T  15179137 taggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttat 15179078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 197 - 256
Target Start/End: Complemental strand, 32994502 - 32994443
Alignment:
Q  197 taggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    |||||||||||||| || | ||||| ||||||| |||||||||||  |||||||||||||    
T  32994502 taggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttat 32994443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 256
Target Start/End: Complemental strand, 32458133 - 32458075
Alignment:
Q  198 aggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    ||||||||||||| || | ||||| ||||||| ||||||||||| ||||| ||||||||    
T  32458133 aggcaaaattacacaattagtcccttaacttaattttaggtaacattttcatcctttat 32458075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 35363340 - 35363278
Alignment:
Q  194 ttttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    ||||||||||||||||| || | ||||| ||||||  |||||||||||  |||||||||||||    
T  35363340 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 35363278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 19558218 - 19558161
Alignment:
Q  199 ggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    |||||||||||| || | ||||| ||||||| |||||||||||  |||||||||||||    
T  19558218 ggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttat 19558161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 190
Target Start/End: Original strand, 18065 - 18238
Alignment:
Q  17 aaaacttcattgtgaagatt-cttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 115  Q
    |||| |||||||||||| || ||||| ||||||||  |||||||| || |||||||||| |||||||||  ||||||||||||||||  |||||||||||    
T  18065 aaaatttcattgtgaaggtttcttatcatgttctagtcatgcttacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatt 18164  T
Q  116 tcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgcaaat 190  Q
    |||| |||||||| |||  |||  ||||| |||||||||| || || | | |||||||||| ||||||| |||||    
T  18165 tcaa-ttttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgctatgaaactttacaaat 18238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 6e-25; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 35 - 185
Target Start/End: Original strand, 23217452 - 23217600
Alignment:
Q  35 ttcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcaccttttt 134  Q
    ||||||||||||||||||||||| || || |||| ||||||||||||||||   ||||||||  |||||||||||||||||||||||||| || | ||||    
T  23217452 ttcttattatgttctaaccatgcctacaaaattaaggaacgaaatttgacctaagagtatacaattactaggaacaaaatttcaattttt-ca-cgtttt 23217549  T
Q  135 gttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttg 185  Q
    | || |||||||||||||||| || | || | |||||| ||| ||||||||    
T  23217550 ggttaaaaataaaaataaattaaaacatcttcgaaatgatatgaaactttg 23217600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 21424700 - 21424643
Alignment:
Q  199 ggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21424700 ggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 21424643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 28997235 - 28997401
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||| || |||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  28997235 aaaatttcactgcgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 28997334  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||| |||  ||||| | |||||||| || || | | |||||||||| |||||||    
T  28997335 caa-ttttgcacattttggttgaaaaatcataataaatttaaacgacttcgaaatgctatgaaacttt 28997401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 34948443 - 34948277
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||| | ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  34948443 aaaatttcattgtgaaggttcttgtcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 34948344  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||  |||  ||||| |||||||||| || || | | || ||||||| |||||||    
T  34948343 caa-ttttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgatatgctatgaaacttt 34948277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 190
Target Start/End: Original strand, 399124 - 399297
Alignment:
Q  17 aaaacttcattgtgaa-gattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 115  Q
    |||| ||||||||||| | ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||    
T  399124 aaaatttcattgtgaatgtttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatt 399223  T
Q  116 tcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgcaaat 190  Q
    |||| |||||||| |||  |||  ||||| |||||||||| || ||   | |||||||||| ||||||| |||||    
T  399224 tcaa-ttttgcacgtttcagttgaaaaatcaaaataaatttaaacgatttcgaaatgctatgaaactttacaaat 399297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 187
Target Start/End: Original strand, 28931526 - 28931683
Alignment:
Q  29 tgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcac 128  Q
    |||||||| |||| |  |||||||||||| || || ||||| ||||||||||||||| || |||||||||||||  ||||||||||| ||| ||| ||||    
T  28931526 tgaagattgttatgaccttctaaccatgcctacaaaattagagaacgaaatttgacccgtaagtatacgcttacacggaacaaaattgcaa-tttcgcac 28931624  T
Q  129 ctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgca 187  Q
     |||| |||  ||||| ||||||||| |||  ||| |||||||||||  ||||||||||    
T  28931625 attttggttcaaaaattaaaataaatcgaaatgtctttgaaatgctacgaaactttgca 28931683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 21419308 - 21419364
Alignment:
Q  196 ttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcct 252  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  21419308 ttaggcaaaattacacaaatggtcctataacttatttttaggtaacgttttcgtcct 21419364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 333
Target Start/End: Complemental strand, 21424549 - 21424503
Alignment:
Q  287 atttaactttatgttcatcttctccaatgttcacacaagcttcttct 333  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||    
T  21424549 atttaacgttatgttcatcttctccaatgttcacacaagcttcttct 21424503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 29743790 - 29743896
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||  ||||||| |||||| || ||||| || || |||||||||  |||||||||  |||||||||| |||||  ||||||||||||    
T  29743790 aaaatttcattgtgaatgttcttatcatgttccaatcatgcctacaaaattagggaattaaatttgacttgtgagtatacacttacgcggaacaaaattt 29743889  T
Q  117 caatttt 123  Q
    |||||||    
T  29743890 caatttt 29743896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 33228997 - 33228891
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||||| ||||||||  ||||| |  || |||||||||| |||||||||  |||||| ||| |||||  ||||||||||||    
T  33228997 aaaatttcattgtgaaggttcttatcatgttctagtcatgcctgcaaaattagggaactaaatttgacttgtgagtgtacacttacgcggaacaaaattt 33228898  T
Q  117 caatttt 123  Q
    |||||||    
T  33228897 caatttt 33228891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 10026140 - 10026197
Alignment:
Q  199 ggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    |||||||||||| |||| ||||| ||||||| |||||||||||||||| |||||||||    
T  10026140 ggcaaaattacataaatagtcccttaacttaattttaggtaacgttttagtcctttat 10026197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 10231806 - 10231975
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| ||||| |||||| |||||||  |||||||||||||| || || |||||  |||||||||||||  |||| |||| | |||||  ||||||||||     
T  10231806 aaaatttcatggtgaaggttcttatgttgttctaaccatgcctagaaaattagaaaacgaaatttgactcgtgaatatatgtttactcagaacaaaattg 10231905  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgca 187  Q
    ||| |||  ||| |||| |||  |||||||||| |||| ||| | || ||||||| |||| ||| ||||||    
T  10231906 caa-tttcacacgttttggttgaaaaataaaaagaaatcgaaacatctttgaaatactatgaaattttgca 10231975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 13838376 - 13838472
Alignment:
Q  87 gtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||||||||||||||||  ||||||||||||||| |||||||| |||| |||  ||||| |||||||||| || || | | |||||| ||| |||||||    
T  13838376 gtgagtatacgcttacgcggaacaaaatttcaa-ttttgcacgttttagttgaaaaatcaaaataaatttaaacgacttcgaaatgttatgaaacttt 13838472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 10027184 - 10027124
Alignment:
Q  196 ttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    ||||||| ||||||| |||| ||||| ||||||| ||||||||||| |||| |||||||||    
T  10027184 ttaggcataattacataaatagtcccttaacttaattttaggtaacattttggtcctttat 10027124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 33595670 - 33595608
Alignment:
Q  194 ttttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    ||||||||||||||||| || | ||||| ||||||  |||||||||||  |||||||||||||    
T  33595670 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 33595608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 260
Target Start/End: Original strand, 3218152 - 3218212
Alignment:
Q  200 gcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttattttt 260  Q
    ||||||||||| || | ||||| ||||||  |||||||||||  |||||||||||||||||    
T  3218152 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttattttt 3218212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 256
Target Start/End: Complemental strand, 3922895 - 3922827
Alignment:
Q  188 aattgtttttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    |||| ||||| |||||||||||| || | ||||| ||||||  |||||||||||  |||||||||||||    
T  3922895 aatttttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 3922827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 4e-23; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 45419088 - 45419254
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||| ||||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  45419088 aaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 45419187  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||| |||  ||||| | |||||||| || || | | |||||||||| |||||||    
T  45419188 caa-ttttgcacgttttggttgaaaaatcataataaatttaaacgacttcgaaatgctatgaaacttt 45419254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 190
Target Start/End: Complemental strand, 17444701 - 17444528
Alignment:
Q  17 aaaacttcattgtgaagatt-cttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 115  Q
    |||| |||||||||||| || ||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||    
T  17444701 aaaatttcattgtgaaggtttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatt 17444602  T
Q  116 tcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgcaaat 190  Q
    |||| |||||||| |||  |||  ||||| |||||||||| || || | | |||||||||| ||||||| |||||    
T  17444601 tcaa-ttttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgctatgaaactttacaaat 17444528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 190
Target Start/End: Complemental strand, 41251294 - 41251121
Alignment:
Q  17 aaaacttcattgtgaa-gattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 115  Q
    |||| ||||||||||| | ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||    
T  41251294 aaaatttcattgtgaatgtttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatt 41251195  T
Q  116 tcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgcaaat 190  Q
    |||| |||||||| |||  |||  ||||| |||||||||| || || | | |||||||||| ||||||| |||||    
T  41251194 tcaa-ttttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgctatgaaactttacaaat 41251121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 155
Target Start/End: Original strand, 45121714 - 45121851
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||||| ||||| ||  ||| | || || |||||||||| |||||||||  ||||||||||||||||| ||||||||||||    
T  45121714 aaaatttcattgtgaagtttcttatcatgttttagtcatacgtacaaaattagggaactaaatttgacatgtgagtatacgcttacttggaacaaaattt 45121813  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaatt 155  Q
    |||||||| ||| |||| |||  ||||| ||||||||||    
T  45121814 caattttt-cacgttttggttgaaaaatcaaaataaatt 45121851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 7072196 - 7072016
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| ||||||| |||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||| ||||||||||||   |||||||||||    
T  7072196 aaaatttcattgggaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgggtatacgcttacgctgaacaaaattt 7072097  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgcaaattgttttta 198  Q
    ||| |||||||| |||| |||  ||||| |||||||||| |||||   | |||||||||| ||||||| || ||| ||||||    
T  7072096 caa-ttttgcacgttttggttgaaaaatcaaaataaatttaatcgatttcgaaatgctatgaaactttacatattattttta 7072016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 35 - 174
Target Start/End: Original strand, 18829380 - 18829518
Alignment:
Q  35 ttcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcaccttttt 134  Q
    ||||||| |||||||||| |||| || || ||||| ||||| ||||||||| |||||||||| |||||| ||||||||||| ||| ||| |||| ||||     
T  18829380 ttcttatgatgttctaactatgcctacaaaattagagaacggaatttgacccgtgagtatacacttactcggaacaaaattgcaa-tttcgcacgttttc 18829478  T
Q  135 gttttaaaataaaaataaattgaatcgtcattgaaatgct 174  Q
    |||  ||||| ||||||||| ||| |||| ||||||||||    
T  18829479 gttgaaaaattaaaataaatcgaaacgtctttgaaatgct 18829518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 35963197 - 35963363
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||| | ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  35963197 aaaatttcattgtgaaggttcttgtcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 35963296  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||  |||  ||||| |||||||||| || || | | || ||||||| |||||||    
T  35963297 caa-ttttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgatatgctatgaaacttt 35963363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 190
Target Start/End: Complemental strand, 6403464 - 6403291
Alignment:
Q  17 aaaacttcattgtgaa-gattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 115  Q
    |||| ||||||||||| | ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||    
T  6403464 aaaatttcattgtgaatgtttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatt 6403365  T
Q  116 tcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgcaaat 190  Q
    |||| |||||||| |||  |||  ||||| |||||||||| || ||   | |||||||||| ||||||| |||||    
T  6403364 tcaa-ttttgcacgtttcagttgaaaaatcaaaataaatttaaacgatttcgaaatgctatgaaactttacaaat 6403291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 18982096 - 18982202
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| ||||| |||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  18982096 aaaatttcatcgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattt 18982195  T
Q  117 caatttt 123  Q
    |||||||    
T  18982196 caatttt 18982202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 31581281 - 31581175
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  | ||||||||||    
T  31581281 aaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcgaaacaaaattt 31581182  T
Q  117 caatttt 123  Q
    |||||||    
T  31581181 caatttt 31581175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 4554854 - 4554689
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||  ||||||| ||||||||  ||||| || || ||||| |||  |||||||||  || ||||||||||| |  ||||||||||||    
T  4554854 aaaatttcattgtgaatgttcttatcatgttctagtcatgcctacaaaattagagaattaaatttgacttgttagtatacgcttgcgtggaacaaaattt 4554755  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| ||||||| ||||||| || |||||||||||||||| || || ||| |||||| ||| |||||||    
T  4554754 caa-ttttgca-ctttttggttgaaaataaaaataaatttaaacgacatcgaaatgttatgaaacttt 4554689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 184
Target Start/End: Complemental strand, 32126837 - 32126683
Alignment:
Q  29 tgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcac 128  Q
    ||||| || |||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||| |||    
T  32126837 tgaaggttattatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttt-cac 32126739  T
Q  129 ctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
     |||  |||  ||||| |||||||||| || || | | |||||||||| |||||||    
T  32126738 gtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgctatgaaacttt 32126683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 2957806 - 2957700
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| ||||||||| || ||||||| ||||||||  ||||| || || |||||||||| |||||||||  |||||||||| |||||  ||||||||||||    
T  2957806 aaaatttcattgtgtaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacccttacgcggaacaaaattt 2957707  T
Q  117 caatttt 123  Q
    |||||||    
T  2957706 caatttt 2957700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 12756499 - 12756393
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||| ||||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  |||||||||||||||   ||||||||||||    
T  12756499 aaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttatgcggaacaaaattt 12756400  T
Q  117 caatttt 123  Q
    |||||||    
T  12756399 caatttt 12756393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 2286295 - 2286460
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||||| ||||||||  ||||| || || |||||| ||| ||||||| |  ||||||||||||||||  ||||||||||||    
T  2286295 aaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattaggaaactaaatttg-cttgtgagtatacgcttacacggaacaaaattt 2286393  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||  |||  ||||| |||||||||| || || | |  ||||||||| |||||||    
T  2286394 caa-ttttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcaaaatgctatgaaacttt 2286460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 26162364 - 26162198
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||| ||||| | ||||| ||||||||  ||| | || || |||||||||| |||||||||  |||| |||||||||||  ||||||||||||    
T  26162364 aaaatttcattctgaaggtccttatcatgttctagtcatacctacaaaattagggaactaaatttgacttgtgactatacgcttacgcggaacaaaattt 26162265  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||| |||  ||||| |||||||||| || || | | |||||| ||| |||||||    
T  26162264 caa-ttttgcacgttttggttgaaaaatcaaaataaatttaaacgacttcgaaatgatatgaaacttt 26162198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 28 - 187
Target Start/End: Original strand, 26591559 - 26591716
Alignment:
Q  28 gtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgca 127  Q
    |||||| ||||||| ||| ||||||||||| || || ||||| ||| | |||||||||  |||||||||| ||||| ||| ||||||| ||| ||| |||    
T  26591559 gtgaaggttcttat-atggtctaaccatgcctaaaaaattagagaatggaatttgacccatgagtatacgtttactcggatcaaaattgcaa-tttcgca 26591656  T
Q  128 cctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgca 187  Q
    | |||| |||  |||||||||||||||||||   || |||||||||||  ||||||||||    
T  26591657 cgttttggttgaaaaataaaaataaattgaaatatctttgaaatgctacgaaactttgca 26591716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 42442491 - 42442597
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||  ||||||| ||||||||  ||||| || || |||| ||||| |||||||||  ||||||||||||||||   |||||||||||    
T  42442491 aaaatttcattgtgaatgttcttatcatgttctagtcatgcctacaaaattatggaactaaatttgacttgtgagtatacgcttacgcagaacaaaattt 42442590  T
Q  117 caatttt 123  Q
    |||||||    
T  42442591 caatttt 42442597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 37621723 - 37621618
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||||||| ||||||||||||||| || || ||||| ||||  | |||||   ||||||||| ||||||| |||||||||||     
T  37621723 aaaatttcattgtgaaggttcttatgatgttctaaccatgcctacaaaattagagaacagactttgattcgtgagtatatgcttactcggaacaaaattg 37621624  T
Q  117 caattt 122  Q
    ||||||    
T  37621623 caattt 37621618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 256
Target Start/End: Complemental strand, 8322530 - 8322471
Alignment:
Q  197 taggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    ||||||||||||||||| | ||||| ||||||| ||||||||||| ||||||||||||||    
T  8322530 taggcaaaattacagaattcgtcccttaacttaattttaggtaacattttcgtcctttat 8322471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 17373500 - 17373394
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttct-aaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 115  Q
    |||| ||||| |||||  ||||||| ||||| | |||||||| || || ||||| ||| ||||||||||| ||||||||||||||| | |||||||||||    
T  17373500 aaaatttcatggtgaatgttcttatgatgtttttaaccatgcctacaaaattagagaatgaaatttgacccgtgagtatacgcttatttggaacaaaatt 17373401  T
Q  116 tcaattt 122  Q
     ||||||    
T  17373400 gcaattt 17373394  T

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Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 26238446 - 26238531
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttac 102  Q
    |||| |||||||||||| ||||||| ||||||||  ||||| || || |||||||||| ||||||| |  ||||||||||||||||    
T  26238446 aaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgccttgtgagtatacgcttac 26238531  T

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Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 8058957 - 8058871
Alignment:
Q  65 attagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataa 152  Q
    |||||||||| |||||||||  ||||||||||||||||  |||||||||||| || |||||||| |||| |||  ||||| |||||||    
T  8058957 attagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattttaa-ttttgcacgttttggttgaaaaatcaaaataa 8058871  T

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Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 256
Target Start/End: Complemental strand, 27360473 - 27360410
Alignment:
Q  193 tttttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    |||||||||||||||||| || | ||||| ||||||  ||||||||||| ||||||||||||||    
T  27360473 tttttaggcaaaattacacaattagtcccttaactttattttaggtaacattttcgtcctttat 27360410  T

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Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 30337777 - 30337717
Alignment:
Q  196 ttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    |||||||||||||||||| | ||||| ||||||| |||||| |||| || |||||||||||    
T  30337777 ttaggcaaaattacagaattagtcccttaacttaattttagataacattatcgtcctttat 30337717  T

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Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 256
Target Start/End: Original strand, 17846007 - 17846065
Alignment:
Q  198 aggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    ||||||||||||| || | ||||| ||||||  ||||||||||| ||||||||||||||    
T  17846007 aggcaaaattacacaattagtcccttaactttattttaggtaacattttcgtcctttat 17846065  T

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Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 30337424 - 30337481
Alignment:
Q  199 ggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    |||||||||||| || | ||||  ||||||| ||||||||||| ||||||||||||||    
T  30337424 ggcaaaattacacaattagtccattaacttaattttaggtaacattttcgtcctttat 30337481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 816685 - 816613
Alignment:
Q  51 accatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 123  Q
    ||||||| || || |||||| ||| |||||||||| || |||||||||||||| | || |||||| |||||||    
T  816685 accatgcctacaaaattaggaaacaaaatttgacccgtaagtatacgcttactcgaaataaaattgcaatttt 816613  T

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Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 25391505 - 25391568
Alignment:
Q  37 cttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgctta 101  Q
    ||||| ||||||||||||||| || || ||||| ||| |||||||||||| |||||||| |||||    
T  25391505 cttatgatgttctaaccatgcctacaaaattagtgaatgaaatttgacca-tgagtatatgctta 25391568  T

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Target: scaffold0134 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 17812 - 17978
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||||||||||| ||| ||||||||||||||||||| || || |||| ||||||| |||||| |  | |||||||  ||||||||||||||||||    
T  17812 aaaatttcattgtgaaggttcatattatgttctaaccatgcctacaaaattaaggaacgacatttgatctattagtatacaattactaggaacaaaattt 17911  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttg 185  Q
    ||| ||||||| | ||| |||  |||||||||| |||||| | |||| | |||||| ||| ||||||||    
T  17912 caa-ttttgca-cgtttggttgaaaaataaaaacaaattgcaacgtcttcgaaatgatatgaaactttg 17978  T

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Target: scaffold0002 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 190
Target Start/End: Complemental strand, 480117 - 479944
Alignment:
Q  17 aaaacttcattgtgaa-gattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 115  Q
    |||| ||||||||||| | ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||    
T  480117 aaaatttcattgtgaatgtttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatt 480018  T
Q  116 tcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgcaaat 190  Q
    |||| |||||||| |||  |||  ||||| |||||||||| || ||   | |||||||||| ||||||| |||||    
T  480017 tcaa-ttttgcacgtttcagttgaaaaatcaaaataaatttaaacgatttcgaaatgctatgaaactttacaaat 479944  T

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Target: scaffold0002; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 330194 - 330254
Alignment:
Q  196 ttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    ||||||||||||||| || | ||||| ||||||  ||||||||||| ||||||||||||||    
T  330194 ttaggcaaaattacacaattagtcccttaactttattttaggtaacattttcgtcctttat 330254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 53412 - 53578
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| |||| ||||||| ||||||| ||| ||||  ||||| || || |||||||||| |||||||||  |||||||||| |||||  ||||||||||||    
T  53412 aaaatttcactgtgaaggttcttatcatgctctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacacttacgcggaacaaaattt 53511  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaacttt 184  Q
    ||| |||||||| |||| |||  ||||| | |||||||| || || | | |||||||||| |||||||    
T  53512 caa-ttttgcacgttttggttgaaaaatcataataaatttaaacgacttcgaaatgctatgaaacttt 53578  T

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Target: scaffold0831 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0831
Description:

Target: scaffold0831; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 157
Target Start/End: Original strand, 3382 - 3521
Alignment:
Q  16 aaaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 115  Q
    ||||| ||||| ||||| |||||||  || |||||||||||| || || ||| |||||| | |||||| | ||||||||| | ||| | |||||||||||    
T  3382 aaaaaattcatggtgaaaattcttac-atattctaaccatgcctacaaaattggggaacaacatttgatccgtgagtatatggttagtcggaacaaaatt 3480  T
Q  116 tcaatttttgcacctttttgttttaaaataaaaataaattga 157  Q
     ||| |||||||| ||||||||  |||||||||| |||||||    
T  3481 gcaa-ttttgcacatttttgttgaaaaataaaaacaaattga 3521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 8526 - 8695
Alignment:
Q  17 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 116  Q
    |||| ||||| |||||| |||||||  |||||||||||||| || || |||||  |||||||||||||  |||| |||| | |||||  ||||||||||     
T  8526 aaaatttcatggtgaaggttcttatgttgttctaaccatgcctagaaaattagaaaacgaaatttgactcgtgaatatatgtttactcagaacaaaattg 8625  T
Q  117 caatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaaatgctataaaactttgca 187  Q
    ||| |||  ||| |||| |||  |||||||||| |||| ||| | || ||||||| |||| ||| ||||||    
T  8626 caa-tttcacacgttttggttgaaaaataaaaagaaatcgaaacatctttgaaatactatgaaattttgca 8695  T

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Target: scaffold0311 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 12945 - 12885
Alignment:
Q  196 ttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    ||||||||||||||| || | ||||| ||||||| |||||| |||| ||||||||||||||    
T  12945 ttaggcaaaattacacaattagtcccttaacttaattttagataacattttcgtcctttat 12885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 136913 - 136973
Alignment:
Q  196 ttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttat 256  Q
    ||||||||||||||| || | ||||| ||||||  ||||||||||| ||||||||||||||    
T  136913 ttaggcaaaattacacaattagtcccttaactttattttaggtaacattttcgtcctttat 136973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 11940 - 12001
Alignment:
Q  199 ggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttattttt 260  Q
    |||||||||||| || | ||||| ||||||| ||||||||||| ||||||| |||| |||||    
T  11940 ggcaaaattacacaattagtcccttaacttaattttaggtaacattttcgttcttttttttt 12001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 12280 - 12223
Alignment:
Q  198 aggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtccttta 255  Q
    ||||||||||||| || | ||||| ||||||| |||||||||||  ||||||||||||    
T  12280 aggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtccttta 12223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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