View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18425_high_20 (Length: 251)

Name: NF18425_high_20
Description: NF18425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18425_high_20
NF18425_high_20
[»] chr8 (47 HSPs)
chr8 (1-230)||(17982359-17982588)
chr8 (1-229)||(1746451-1746679)
chr8 (1-233)||(19948554-19948786)
chr8 (1-229)||(31217964-31218192)
chr8 (1-229)||(34254561-34254789)
chr8 (1-233)||(44303557-44303789)
chr8 (1-229)||(34256737-34256965)
chr8 (1-229)||(19945593-19945800)
chr8 (1-226)||(43036134-43036358)
chr8 (1-226)||(15212497-15212721)
chr8 (1-225)||(30143054-30143277)
chr8 (1-194)||(12702871-12703065)
chr8 (1-193)||(33351893-33352085)
chr8 (5-130)||(42498000-42498125)
chr8 (47-196)||(5702116-5702266)
chr8 (1-133)||(27811080-27811213)
chr8 (47-187)||(23799221-23799362)
chr8 (1-224)||(4731371-4731593)
chr8 (1-130)||(4733610-4733744)
chr8 (47-165)||(7412651-7412769)
chr8 (148-225)||(42497926-42498003)
chr8 (47-133)||(4696306-4696394)
chr8 (2-79)||(2627599-2627676)
chr8 (47-125)||(4456339-4456419)
chr8 (45-230)||(3051430-3051615)
chr8 (148-230)||(4283035-4283116)
chr8 (38-226)||(4743463-4743651)
chr8 (116-226)||(42435558-42435666)
chr8 (140-230)||(10014866-10014955)
chr8 (140-226)||(11383499-11383584)
chr8 (20-81)||(1872175-1872236)
chr8 (140-225)||(27811010-27811094)
chr8 (1-73)||(1292696-1292768)
chr8 (4-71)||(5689136-5689203)
chr8 (4-86)||(3303906-3303988)
chr8 (118-195)||(19175370-19175445)
chr8 (140-209)||(4696252-4696320)
chr8 (1-72)||(6598836-6598907)
chr8 (1-72)||(6674289-6674360)
chr8 (4-63)||(40320940-40320999)
chr8 (1-72)||(41365080-41365151)
chr8 (1-71)||(10929666-10929735)
chr8 (47-134)||(19175448-19175540)
chr8 (20-74)||(32902439-32902493)
chr8 (140-226)||(40221257-40221342)
chr8 (1-54)||(10015030-10015083)
chr8 (10-63)||(29796565-29796618)
[»] chr5 (46 HSPs)
chr5 (1-233)||(13342764-13342996)
chr5 (1-233)||(36074277-36074510)
chr5 (1-233)||(25412465-25412697)
chr5 (1-233)||(30182291-30182524)
chr5 (12-226)||(37438856-37439072)
chr5 (1-226)||(13239463-13239687)
chr5 (1-226)||(42426468-42426692)
chr5 (1-221)||(13487919-13488138)
chr5 (1-226)||(32636534-32636759)
chr5 (1-165)||(30683153-30683317)
chr5 (48-231)||(19806112-19806294)
chr5 (1-165)||(533540-533704)
chr5 (1-134)||(28750888-28751023)
chr5 (49-195)||(14520543-14520689)
chr5 (1-226)||(42428663-42428875)
chr5 (47-195)||(12083815-12083963)
chr5 (47-195)||(11916609-11916758)
chr5 (1-83)||(39468782-39468864)
chr5 (3-189)||(16649857-16650044)
chr5 (116-231)||(27015020-27015133)
chr5 (1-79)||(29720228-29720307)
chr5 (116-226)||(5057542-5057650)
chr5 (2-79)||(9789451-9789528)
chr5 (2-79)||(18441875-18441952)
chr5 (47-195)||(9352972-9353118)
chr5 (114-226)||(16650969-16651079)
chr5 (1-79)||(29722388-29722467)
chr5 (1-79)||(29751385-29751464)
chr5 (2-97)||(16409321-16409416)
chr5 (140-227)||(535613-535699)
chr5 (47-110)||(11181555-11181618)
chr5 (2-81)||(26177746-26177824)
chr5 (47-195)||(36931987-36932134)
chr5 (1-91)||(42926738-42926828)
chr5 (5-97)||(26170620-26170712)
chr5 (117-209)||(31004777-31004868)
chr5 (4-60)||(42310171-42310227)
chr5 (59-133)||(535685-535760)
chr5 (1-60)||(537901-537960)
chr5 (1-80)||(16451937-16452016)
chr5 (1-72)||(31182837-31182908)
chr5 (47-165)||(15464845-15464963)
chr5 (47-102)||(17003689-17003745)
chr5 (1-72)||(5887649-5887720)
chr5 (148-231)||(39468912-39468994)
chr5 (177-230)||(533488-533540)
[»] chr7 (59 HSPs)
chr7 (1-233)||(24514993-24515225)
chr7 (1-229)||(4178482-4178710)
chr7 (1-233)||(35853616-35853850)
chr7 (1-233)||(29990757-29990990)
chr7 (1-226)||(23554750-23554975)
chr7 (20-231)||(2761554-2761764)
chr7 (1-226)||(18126355-18126579)
chr7 (1-226)||(47676369-47676593)
chr7 (1-233)||(1113360-1113592)
chr7 (1-226)||(14070066-14070291)
chr7 (1-226)||(14380094-14380319)
chr7 (1-226)||(4585872-4586096)
chr7 (1-226)||(47674176-47674400)
chr7 (1-134)||(30024965-30025099)
chr7 (47-195)||(49092000-49092150)
chr7 (96-216)||(19495691-19495811)
chr7 (47-230)||(46515911-46516091)
chr7 (1-225)||(26417025-26417251)
chr7 (1-233)||(48491282-48491514)
chr7 (1-165)||(31733202-31733359)
chr7 (47-195)||(21989219-21989367)
chr7 (47-195)||(44847763-44847911)
chr7 (1-226)||(48489141-48489366)
chr7 (47-195)||(2647334-2647483)
chr7 (87-195)||(21983595-21983702)
chr7 (1-101)||(19502013-19502113)
chr7 (5-100)||(43864080-43864175)
chr7 (1-97)||(25767187-25767283)
chr7 (47-226)||(33332057-33332236)
chr7 (47-195)||(2479647-2479795)
chr7 (116-226)||(6360479-6360587)
chr7 (1-64)||(48408674-48408737)
chr7 (47-195)||(79699-79849)
chr7 (114-224)||(27347636-27347744)
chr7 (71-226)||(4538853-4539008)
chr7 (2-97)||(39731215-39731310)
chr7 (4-71)||(12098108-12098175)
chr7 (4-71)||(41317683-41317750)
chr7 (60-110)||(2759071-2759121)
chr7 (10-230)||(6570300-6570520)
chr7 (116-226)||(32358403-32358511)
chr7 (2-64)||(43504382-43504444)
chr7 (87-195)||(47263995-47264102)
chr7 (47-226)||(4796276-4796455)
chr7 (1-79)||(24789706-24789784)
chr7 (1-72)||(38671455-38671526)
chr7 (14-68)||(4253776-4253830)
chr7 (5-71)||(36146659-36146725)
chr7 (140-225)||(2389786-2389870)
chr7 (10-102)||(3047529-3047622)
chr7 (157-226)||(43863972-43864040)
chr7 (1-64)||(20343776-20343840)
chr7 (4-71)||(23565297-23565363)
chr7 (5-72)||(24526134-24526201)
chr7 (114-196)||(496341-496422)
chr7 (116-194)||(3050492-3050569)
chr7 (5-71)||(31105630-31105696)
chr7 (1-54)||(496216-496269)
chr7 (47-102)||(20284400-20284456)
[»] chr3 (70 HSPs)
chr3 (1-233)||(5260556-5260788)
chr3 (1-229)||(5258377-5258605)
chr3 (1-229)||(9636360-9636589)
chr3 (1-229)||(45094871-45095100)
chr3 (1-226)||(7761974-7762201)
chr3 (3-226)||(7764162-7764401)
chr3 (5-226)||(29812774-29812994)
chr3 (1-195)||(40734239-40734433)
chr3 (1-217)||(29810588-29810803)
chr3 (1-195)||(37408200-37408394)
chr3 (47-195)||(48438526-48438675)
chr3 (47-195)||(40592408-40592557)
chr3 (47-195)||(30709423-30709572)
chr3 (47-195)||(47923530-47923679)
chr3 (1-165)||(51398585-51398749)
chr3 (1-226)||(5236689-5236914)
chr3 (47-195)||(39032182-39032330)
chr3 (47-196)||(1735929-1736079)
chr3 (47-195)||(36029404-36029553)
chr3 (47-233)||(24694755-24694941)
chr3 (138-229)||(3393314-3393404)
chr3 (47-195)||(8370116-8370264)
chr3 (47-195)||(16264660-16264808)
chr3 (47-195)||(27027017-27027165)
chr3 (47-196)||(27974578-27974727)
chr3 (116-226)||(4569444-4569552)
chr3 (116-224)||(31340608-31340715)
chr3 (56-226)||(44331735-44331904)
chr3 (47-195)||(8126941-8127090)
chr3 (140-226)||(34490725-34490810)
chr3 (20-225)||(44331281-44331471)
chr3 (133-226)||(43402373-43402465)
chr3 (1-81)||(23200370-23200449)
chr3 (47-195)||(27038362-27038501)
chr3 (47-195)||(37725986-37726134)
chr3 (116-226)||(40912830-40912938)
chr3 (116-226)||(55302532-55302640)
chr3 (1-97)||(23198171-23198267)
chr3 (117-226)||(43404301-43404408)
chr3 (1-72)||(32744659-32744730)
chr3 (47-195)||(33386302-33386450)
chr3 (116-226)||(6096167-6096275)
chr3 (47-134)||(35925791-35925880)
chr3 (5-65)||(40735254-40735314)
chr3 (4-72)||(53921739-53921807)
chr3 (2-61)||(800973-801032)
chr3 (140-226)||(49200041-49200126)
chr3 (2-79)||(7782375-7782452)
chr3 (114-195)||(40735170-40735250)
chr3 (4-72)||(29196637-29196705)
chr3 (1-64)||(54635004-54635068)
chr3 (1-68)||(2075303-2075369)
chr3 (4-71)||(9666704-9666771)
chr3 (4-71)||(44700728-44700795)
chr3 (1-63)||(39153594-39153656)
chr3 (133-211)||(46173241-46173318)
chr3 (116-226)||(54593197-54593305)
chr3 (45-195)||(23410607-23410757)
chr3 (1-64)||(6716379-6716443)
chr3 (1-64)||(6718563-6718627)
chr3 (1-72)||(760711-760782)
chr3 (1-72)||(9581147-9581218)
chr3 (1-72)||(19684122-19684193)
chr3 (1-72)||(22835235-22835306)
chr3 (1-72)||(26386714-26386785)
chr3 (140-195)||(27986103-27986158)
chr3 (47-108)||(21711533-21711594)
chr3 (1-62)||(45282864-45282926)
chr3 (47-130)||(27986147-27986231)
chr3 (47-102)||(6794434-6794490)
[»] chr1 (54 HSPs)
chr1 (1-229)||(20762379-20762607)
chr1 (1-229)||(13316551-13316779)
chr1 (5-226)||(3206696-3206918)
chr1 (1-226)||(31658949-31659173)
chr1 (1-226)||(49918060-49918284)
chr1 (1-229)||(30476681-30476908)
chr1 (5-225)||(10924935-10925154)
chr1 (1-188)||(28220459-28220646)
chr1 (1-188)||(28223654-28223841)
chr1 (1-222)||(1833236-1833457)
chr1 (1-222)||(3156582-3156801)
chr1 (1-226)||(44454870-44455095)
chr1 (1-134)||(37503787-37503921)
chr1 (47-195)||(3282018-3282166)
chr1 (47-195)||(21536208-21536356)
chr1 (47-195)||(13598711-13598860)
chr1 (5-130)||(3189137-3189262)
chr1 (5-130)||(3197954-3198079)
chr1 (47-208)||(29652124-29652286)
chr1 (47-195)||(13604260-13604408)
chr1 (47-195)||(37070078-37070227)
chr1 (1-112)||(37560102-37560213)
chr1 (5-226)||(46064629-46064849)
chr1 (140-226)||(11348212-11348297)
chr1 (47-165)||(26644565-26644684)
chr1 (116-224)||(37033636-37033742)
chr1 (1-68)||(15820175-15820242)
chr1 (4-80)||(13138210-13138286)
chr1 (1-64)||(40282256-40282320)
chr1 (2-97)||(51765234-51765329)
chr1 (148-226)||(3189061-3189140)
chr1 (148-226)||(3197878-3197957)
chr1 (4-71)||(28265802-28265869)
chr1 (4-71)||(50167424-50167491)
chr1 (6-195)||(4552875-4553075)
chr1 (46-86)||(9022653-9022693)
chr1 (1-64)||(21053837-21053901)
chr1 (4-71)||(777095-777162)
chr1 (1-79)||(9987066-9987145)
chr1 (4-71)||(50169446-50169513)
chr1 (140-230)||(16455353-16455442)
chr1 (5-86)||(23555502-23555583)
chr1 (140-225)||(29135762-29135846)
chr1 (1-60)||(20622463-20622523)
chr1 (1-72)||(197141-197212)
chr1 (1-72)||(3847354-3847425)
chr1 (1-72)||(8551020-8551091)
chr1 (1-72)||(40122431-40122502)
chr1 (4-71)||(45644591-45644658)
chr1 (5-54)||(834404-834453)
chr1 (153-205)||(15820038-15820090)
chr1 (47-102)||(32889749-32889805)
chr1 (47-102)||(47098555-47098611)
chr1 (47-102)||(47102569-47102625)
[»] chr2 (43 HSPs)
chr2 (1-233)||(4503365-4503597)
chr2 (1-225)||(45099466-45099690)
chr2 (1-229)||(36205896-36206126)
chr2 (1-233)||(5723487-5723719)
chr2 (1-233)||(2334650-2334882)
chr2 (1-226)||(36988308-36988533)
chr2 (1-226)||(6595239-6595452)
chr2 (1-226)||(36318242-36318466)
chr2 (8-226)||(2837084-2837301)
chr2 (1-165)||(39284656-39284820)
chr2 (1-130)||(38312045-38312175)
chr2 (47-195)||(34389162-34389310)
chr2 (47-195)||(23078109-23078257)
chr2 (47-195)||(28258815-28258963)
chr2 (1-163)||(29867641-29867804)
chr2 (47-195)||(33528261-33528410)
chr2 (47-224)||(21630256-21630433)
chr2 (49-195)||(10706890-10707036)
chr2 (49-226)||(20522535-20522712)
chr2 (1-130)||(17057602-17057732)
chr2 (1-130)||(17085585-17085715)
chr2 (47-226)||(14698616-14698795)
chr2 (47-196)||(33118446-33118596)
chr2 (47-195)||(13569640-13569789)
chr2 (47-195)||(8389786-8389935)
chr2 (2-79)||(4484565-4484642)
chr2 (48-135)||(36757458-36757547)
chr2 (2-79)||(30833202-30833279)
chr2 (2-97)||(32289411-32289506)
chr2 (1-79)||(6266555-6266634)
chr2 (4-71)||(36773414-36773481)
chr2 (94-195)||(39483235-39483336)
chr2 (148-230)||(40015319-40015400)
chr2 (1-72)||(11151824-11151895)
chr2 (4-63)||(33162686-33162745)
chr2 (1-72)||(42362216-42362287)
chr2 (1-54)||(723977-724030)
chr2 (4-71)||(11049402-11049468)
chr2 (5-72)||(11690365-11690432)
chr2 (1-68)||(12632950-12633017)
chr2 (1-72)||(14202640-14202711)
chr2 (148-195)||(17865590-17865637)
chr2 (53-109)||(17865521-17865578)
[»] chr6 (41 HSPs)
chr6 (1-233)||(30834769-30835002)
chr6 (1-233)||(5406431-5406663)
chr6 (1-233)||(5410756-5410988)
chr6 (10-233)||(31404916-31405139)
chr6 (1-197)||(16452562-16452758)
chr6 (24-229)||(5411489-5411694)
chr6 (1-233)||(33160586-33160819)
chr6 (24-229)||(5407164-5407369)
chr6 (87-233)||(16452759-16452905)
chr6 (1-151)||(5413625-5413775)
chr6 (127-233)||(5413807-5413913)
chr6 (1-130)||(9183264-9183393)
chr6 (49-226)||(22964012-22964188)
chr6 (49-226)||(23824205-23824381)
chr6 (47-195)||(31086110-31086260)
chr6 (47-195)||(18234394-18234543)
chr6 (47-195)||(10076828-10076977)
chr6 (1-215)||(33211418-33211631)
chr6 (47-195)||(5017133-5017282)
chr6 (1-79)||(2171764-2171842)
chr6 (47-195)||(5757116-5757264)
chr6 (148-226)||(9183390-9183467)
chr6 (49-229)||(21272593-21272773)
chr6 (50-226)||(24435579-24435755)
chr6 (47-110)||(23896663-23896727)
chr6 (1-62)||(6097666-6097728)
chr6 (116-226)||(21593159-21593267)
chr6 (114-195)||(31979897-31979977)
chr6 (140-196)||(26954675-26954731)
chr6 (143-226)||(603612-603694)
chr6 (140-195)||(23896737-23896792)
chr6 (1-72)||(26954518-26954589)
chr6 (2-64)||(411981-412043)
chr6 (2-60)||(3072987-3073045)
chr6 (4-72)||(3039152-3039219)
chr6 (1-64)||(27647742-27647806)
chr6 (20-72)||(30684158-30684210)
chr6 (1-72)||(16567070-16567141)
chr6 (1-63)||(16568916-16568978)
chr6 (119-195)||(26661472-26661547)
chr6 (119-195)||(26767443-26767518)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-229)||(434239-434468)
[»] chr4 (60 HSPs)
chr4 (1-233)||(52082890-52083122)
chr4 (1-233)||(52093897-52094129)
chr4 (1-226)||(52095595-52095818)
chr4 (1-175)||(30000038-30000212)
chr4 (5-229)||(5370323-5370536)
chr4 (1-233)||(48142756-48142977)
chr4 (1-226)||(34570647-34570871)
chr4 (1-226)||(5429391-5429614)
chr4 (1-226)||(37740337-37740561)
chr4 (1-226)||(56178869-56179082)
chr4 (1-233)||(29254198-29254429)
chr4 (1-233)||(54200139-54200370)
chr4 (5-134)||(26175873-26176003)
chr4 (10-226)||(36314837-36315052)
chr4 (10-226)||(36329046-36329261)
chr4 (10-195)||(8689134-8689318)
chr4 (5-225)||(9927694-9927917)
chr4 (47-195)||(5268837-5268986)
chr4 (47-226)||(54867490-54867669)
chr4 (1-134)||(12739783-12739917)
chr4 (1-134)||(12747989-12748123)
chr4 (47-226)||(25861640-25861819)
chr4 (47-226)||(6743022-6743201)
chr4 (47-195)||(16622931-16623079)
chr4 (47-195)||(16628510-16628658)
chr4 (1-97)||(13992519-13992616)
chr4 (47-195)||(3777860-3778008)
chr4 (1-130)||(12745669-12745799)
chr4 (47-195)||(5147989-5148137)
chr4 (47-195)||(5143571-5143720)
chr4 (168-232)||(30000873-30000937)
chr4 (116-225)||(6655450-6655557)
chr4 (47-165)||(10047692-10047806)
chr4 (1-93)||(36994368-36994459)
chr4 (47-165)||(35661980-35662098)
chr4 (10-195)||(38152075-38152260)
chr4 (116-226)||(26363758-26363866)
chr4 (116-194)||(27417518-27417595)
chr4 (116-226)||(41639058-41639166)
chr4 (140-226)||(46570116-46570201)
chr4 (47-130)||(5396372-5396457)
chr4 (2-79)||(31495544-31495621)
chr4 (133-226)||(50674429-50674521)
chr4 (158-226)||(12745806-12745874)
chr4 (4-71)||(37229972-37230039)
chr4 (4-71)||(46147591-46147658)
chr4 (4-68)||(45687432-45687496)
chr4 (1-72)||(13009664-13009735)
chr4 (157-226)||(54882533-54882601)
chr4 (140-195)||(5396328-5396383)
chr4 (1-72)||(5871684-5871755)
chr4 (1-72)||(24968975-24969046)
chr4 (5-71)||(36463639-36463705)
chr4 (4-70)||(52467591-52467657)
chr4 (177-222)||(12739947-12739992)
chr4 (177-222)||(12748153-12748198)
chr4 (47-80)||(18377664-18377697)
chr4 (177-226)||(26176033-26176081)
chr4 (10-70)||(23043033-23043093)
chr4 (47-102)||(42599305-42599361)
[»] scaffold0016 (1 HSPs)
scaffold0016 (4-226)||(114297-114522)
[»] scaffold0066 (1 HSPs)
scaffold0066 (1-226)||(20648-20872)
[»] scaffold0006 (3 HSPs)
scaffold0006 (52-195)||(2809-2953)
scaffold0006 (47-195)||(5996-6145)
scaffold0006 (47-195)||(132917-133065)
[»] scaffold0087 (2 HSPs)
scaffold0087 (47-195)||(36470-36618)
scaffold0087 (47-195)||(43599-43747)
[»] scaffold0286 (2 HSPs)
scaffold0286 (1-79)||(22201-22279)
scaffold0286 (116-225)||(11052-11159)
[»] scaffold1519 (1 HSPs)
scaffold1519 (1-70)||(783-852)
[»] scaffold0014 (1 HSPs)
scaffold0014 (116-226)||(80850-80958)
[»] scaffold0036 (1 HSPs)
scaffold0036 (47-147)||(85994-86096)
[»] scaffold0098 (1 HSPs)
scaffold0098 (47-195)||(45510-45658)
[»] scaffold0466 (1 HSPs)
scaffold0466 (116-233)||(6813-6929)
[»] scaffold0491 (2 HSPs)
scaffold0491 (2-97)||(8970-9065)
scaffold0491 (2-97)||(11396-11491)
[»] scaffold0140 (1 HSPs)
scaffold0140 (140-195)||(8055-8110)
[»] scaffold0176 (2 HSPs)
scaffold0176 (140-226)||(17636-17721)
scaffold0176 (47-133)||(17562-17650)
[»] scaffold0510 (1 HSPs)
scaffold0510 (143-195)||(1248-1300)
[»] scaffold0137 (1 HSPs)
scaffold0137 (1-64)||(6154-6217)


Alignment Details
Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 17982588 - 17982359
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  17982588 actctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttatat 17982489  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||    
T  17982488 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctaaaaatcttg 17982389  T
Q  201 cccaacaagccaaaaatcgtgtcacgattg 230  Q
    |||| |||||||||||||||||||||||||    
T  17982388 cccagcaagccaaaaatcgtgtcacgattg 17982359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 1746451 - 1746679
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||| || |||||||||||||||    
T  1746451 actctaatcaaggaccctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttccagctcttcttcaaaatctgcaaagaacacttatat 1746550  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  1746551 agttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttg 1746650  T
Q  201 cccaacaagccaaaaatcgtgtcacgatt 229  Q
    |||| ||||||||||||||||||||||||    
T  1746651 cccagcaagccaaaaatcgtgtcacgatt 1746679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 19948554 - 19948786
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  19948554 actctaatcaaagactctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttatat 19948653  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||| | |||||||||    
T  19948654 agttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaacttatcataaaaatcttg 19948753  T
Q  201 cccaacaagccaaaaatcgtgtcacgattggac 233  Q
     ||| ||||||||||||||||||||||||||||    
T  19948754 tccagcaagccaaaaatcgtgtcacgattggac 19948786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 31218192 - 31217964
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |  |||||||||||||||    
T  31218192 actctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctcttcttcaaaatctacaaagaacacttatat 31218093  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||| |||||| ||||||| |||||||||    
T  31218092 agctgtcttctgcgtcaaaatcgtgtcacgttttttcccaatcgtgtcacgattgatgcgtatgatccaaggtacgaccaaccttatcctaaaaatcttg 31217993  T
Q  201 cccaacaagccaaaaatcgtgtcacgatt 229  Q
    |||||||||||||||||||||||||||||    
T  31217992 cccaacaagccaaaaatcgtgtcacgatt 31217964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 34254561 - 34254789
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  34254561 actctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttatat 34254660  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    |||  ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  34254661 agcaatcttcagcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttg 34254760  T
Q  201 cccaacaagccaaaaatcgtgtcacgatt 229  Q
    |||| ||| ||||||||||||||||||||    
T  34254761 cccagcaatccaaaaatcgtgtcacgatt 34254789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 44303789 - 44303557
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||| |||||||| || |||||||||||||||    
T  44303789 actctaatcaaagaccctaaaccctaaagttgtttcctttgatttctcaagtttctctctcttcaagctctctttcaaaatctgcaaagaacacttatat 44303690  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||| |||||| |||||||| ||||||||    
T  44303689 agctgtcttctgcgtcgaaatcgtgtcacgattttccccaatcgtgccacaattgatgcgtatgatccaaggtacgaccaaccttatcctggaaatcttg 44303590  T
Q  201 cccaacaagccaaaaatcgtgtcacgattggac 233  Q
    |||| ||||||||||||||||||||||||||||    
T  44303589 cccagcaagccaaaaatcgtgtcacgattggac 44303557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 34256737 - 34256965
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| |||||||||||||||||||||||| || ||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||    
T  34256737 actctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagtttatctttcttcaagctctccttcaaaatctgcaaagaacacttatat 34256836  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    |||  ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||    
T  34256837 agcaatcttcagcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacaaccaatcttatcctgaaaatcttg 34256936  T
Q  201 cccaacaagccaaaaatcgtgtcacgatt 229  Q
    | || ||||||||||||||||||||||||    
T  34256937 ctcagcaagccaaaaatcgtgtcacgatt 34256965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 19945593 - 19945800
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| |||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||    
T  19945593 actctaatcaaagactctaaaccctaaagttgcttcctttgatttcccaagtttgtctctcttcaagctctccttcaaaatctgcaaagaacacttatat 19945692  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    |||||||||||||||||||||||                     ||||||||||||||||||||||||||||||| | |||| ||||||||||||||||     
T  19945693 agctgtcttctgcgtcaaaatcg---------------------tgccacgattgatgcgtacgatccaaggtacgatcaaccttatcctgaaaatcttc 19945771  T
Q  201 cccaacaagccaaaaatcgtgtcacgatt 229  Q
    |||||||||||||||||||||||||||||    
T  19945772 cccaacaagccaaaaatcgtgtcacgatt 19945800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 43036358 - 43036134
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||||||||||| | || ||||||||||||||||||||||||||||| ||||| |||||||| || |||||||||||||||    
T  43036358 actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaacctctcattcaaaatctgcaaagaacacttatat 43036259  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    | | |||||| || ||||||||||||||||| ||||||| ||||||| |||| ||| ||||||||||||||||||| | |||| |||||||||||| |||    
T  43036258 aacagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacgtttggtgcgtacgatccaaggtacgatcaaccttatcctgaaaa-ctt 43036161  T
Q  200 gcccaacaagccaaaaatcgtgtcacg 226  Q
    |||||||||| | ||||||||||||||    
T  43036160 gcccaacaagtcgaaaatcgtgtcacg 43036134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 15212721 - 15212497
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  15212721 actctaatcaaagaccctcaaccctaaagttacctcatttgatttcccaagtttctctctcttcaagctctccttcaaaatctgtaaagaacacttatat 15212622  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    ||| |||||| || |||| |||||||||||  ||||||  ||||||| |||| ||| ||||||||| ||||||||| |||||| |||||||||||| |||    
T  15212621 agcagtcttcagctgtcacaatcgtgtcac-attttcctaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-ctt 15212524  T
Q  200 gcccaacaagccaaaaatcgtgtcacg 226  Q
    || || |||||| ||||||||||||||    
T  15212523 gctcagcaagccgaaaatcgtgtcacg 15212497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 30143277 - 30143054
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||    
T  30143277 actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctacaaagaacacttatat 30143178  T
Q  101 agctgtcttctg-cgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    ||| |||||| |  ||||||||||||||||| |||| || ||||||| |||| ||| ||||||||| |||| |||| |||||| ||||||| |||| |||    
T  30143177 agcagtcttcagttgtcaaaatcgtgtcacg-ttttgccaaatcgtgacacggttggtgcgtacgacccaaagtacgaccaaccttatccttaaaa-ctt 30143080  T
Q  200 gcccaacaagccaaaaatcgtgtcac 225  Q
    | ||| |||||| |||||||||||||    
T  30143079 gtccagcaagccgaaaatcgtgtcac 30143054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 12702871 - 12703065
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| ||||||||| || | || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  12702871 actctaatcaaagaccctcaaccctaaatttacctcctttgatttcccaagtttctctctcttcaagctctccttcaaaatatgcaaagaacacttacat 12702970  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaa 194  Q
    | |  |||||  | ||||||||||||||||||||||||| ||||||| ||||  || ||||||||| |||| |||| |||||| |||||||||||    
T  12702971 aacaatcttcaactgtcaaaatcgtgtcacgtttttcccaaatcgtgacacgtatggtgcgtacgacccaatgtacgaccaaccttatcctgaaa 12703065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 33352085 - 33351893
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||||||||||| | |  ||||||||||||||||||||||||||| | ||| |||||||||| || |||||| ||||||||    
T  33352085 actctaatcaaagaccctcaaccctaaagttaccttctttgatttcccaagtttctctctcttccacctcaccttcaaaatttgcaaagaaaacttatat 33351986  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaa 193  Q
    ||| |||||| || ||||||||||||||||| ||||||| |||| || |||| ||| |||||| || ||||||||| |||||| ||||||||||    
T  33351985 agcagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcatgacacgtttggtgcgtatgacccaaggtacgaccaaccttatcctgaa 33351893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 42498125 - 42498000
Alignment:
Q  5 taattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatatagct 104  Q
    |||| ||||||||| |||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||     
T  42498125 taatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacagttatatagca 42498026  T
Q  105 gtcttctgcgtcaaaatcgtgtcacg 130  Q
    |||||| ||||| ||||| |||||||    
T  42498025 gtcttcagcgtcgaaatcatgtcacg 42498000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 47 - 196
Target Start/End: Complemental strand, 5702266 - 5702116
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    |||||||||||||||||||| |||||||||||||| || | ||||||||||||||||| |||||| || |||||||||||| |||||||| ||  |||||    
T  5702266 ccaagtttctctctcttcaacctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgacacgttttgcca-aatcg 5702168  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaat 196  Q
    || |||||||| ||||||| ||||||||||| |||||| |||||||||||||    
T  5702167 tgacacgattggtgcgtacaatccaaggtacgaccaaccttatcctgaaaat 5702116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 27811213 - 27811080
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| ||||||||| || | || ||||||||||||| ||||||||||||| |||| |||||||||||||| |||||||||||||||    
T  27811213 actctaatcaaagaccctcaaccctaaatttacctcctttgatttcccaattttctctctcttccagctttccttcaaaatatgcaaagaacacttatat 27811114  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgttt 133  Q
    ||| |||||| || |||||||||||| |||||||    
T  27811113 agcagtcttcagctgtcaaaatcgtgacacgttt 27811080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 47 - 187
Target Start/End: Complemental strand, 23799362 - 23799221
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||| |||||| || |||||||||||||||||||| | || |||||    
T  23799362 ccaagtttctctctcttcaagctatccttcaaaatatgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ccaaatcg 23799264  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttat 187  Q
    || ||| |||| ||||||||| |||| |||| |||||| ||||    
T  23799263 tgacacaattggtgcgtacgacccaacgtacgaccaaccttat 23799221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 4731593 - 4731371
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||||||||||| | || ||||||||  ||||||||||||||||||| | |||||||||||| |  |||||||||||||||    
T  4731593 actctaatcaaagaccctcaaccctaaagttacctcctttgatttttcaagtttctctctcttcaaccgctccttcaaaatctacaaagaacacttatat 4731494  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    ||  |||||| ||  |||||||||||||||| |||| || ||||||| |||  ||| ||| ||||  ||||||||| |||||  |||| ||||||| | |    
T  4731493 agtagtcttcagctatcaaaatcgtgtcacg-ttttgccaaatcgtgacacagttggtgcctacggcccaaggtacgaccaatcttattctgaaaa-cgt 4731396  T
Q  200 gcccaacaagccaaaaatcgtgtca 224  Q
    | ||| |||||| |||||| |||||    
T  4731395 gtccagcaagccgaaaatcatgtca 4731371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 4733744 - 4733610
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctct--ctcttcaagctctccttcaaaatatg--aaaagaacactt 96  Q
    |||||||| ||||||||| |||||||||||| | ||||||||||||||||||||||||  |||||||| |||||||||||||| ||  ||||||||||||    
T  4733744 actctaatcaaagaccctcaaccctaaagttacctcttttgatttcccaagtttctctctctcttcaacctctccttcaaaatctgcaaaaagaacactt 4733645  T
Q  97 atatagctgtcttctgc-gtcaaaatcgtgtcacg 130  Q
    ||||||  ||||||  | |||||||||||| ||||    
T  4733644 atatagtagtcttcaactgtcaaaatcgtgacacg 4733610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 7412651 - 7412769
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||||||||||||||||||||||||| || | ||||||||||||||||| |||||| || |  ||||||||| ||||||||  || |||||    
T  7412651 ccaagtttctctctcttcaagctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgataaaatcgtgccacgtttt--ccaaatcg 7412748  T
Q  145 tgccacgattgatgcgtacga 165  Q
    ||||| ||||||| |||||||    
T  7412749 tgccatgattgatacgtacga 7412769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 42498003 - 42497926
Alignment:
Q  148 cacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcac 225  Q
    ||||||||||||||| || ||||||||| || ||| ||||||||||||||||||||| |||||||| |||||||||||    
T  42498003 cacgattgatgcgtaggacccaaggtacgactaaccttatcctgaaaatcttgcccagcaagccaataatcgtgtcac 42497926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 4696394 - 4696306
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgttt 133  Q
    ||||||||||||||||||||||||||||||||||| || | |||||| |||||||| | |||||| || ||||||||||||||||||||    
T  4696394 ccaagtttctctctcttcaagctctccttcaaaatctgcacaagaacccttatataacggtcttcagctgtcaaaatcgtgtcacgttt 4696306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 2627676 - 2627599
Alignment:
Q  2 ctctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaa 79  Q
    ||||||| |||||| |||||||||| |||| || | ||||||||||||||||||||||||||| | ||||||||||||    
T  2627676 ctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctctcttccaactctccttcaaa 2627599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 4456339 - 4456419
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtcttctgc-gtcaaaatcgtg 125  Q
    ||||||||||||||||||||||||| ||||||||| || | ||||||||||||||||| |||||| || ||||||||||||    
T  4456339 ccaagtttctctctcttcaagctcttcttcaaaatctgcacaagaacacttatatagccgtcttcagctgtcaaaatcgtg 4456419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 230
Target Start/End: Original strand, 3051430 - 3051615
Alignment:
Q  45 tcccaagtttctctctcttcaagctctccttcaaaatatgaaaag-aacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaat 142  Q
    |||||||||||||||||||||||||||| |||||||| || | || |||||||||||||   ||| | ||  ||||||| ||||||||  || ||  | |    
T  3051430 tcccaagtttctctctcttcaagctctctttcaaaatctgcatagaaacacttatatagtactctgcagctatcaaaattgtgtcacg-attgccaaatt 3051528  T
Q  143 cgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattg 230  Q
    |||| |||||||||||| ||||| |||| |||| |||||| ||||| |||||| | || | |||| ||||||||||||||||| ||||    
T  3051529 cgtgtcacgattgatgcatacgacccaatgtacgaccaaccttatcttgaaaa-cgtgtcaaacatgccaaaaatcgtgtcacaattg 3051615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 4283116 - 4283035
Alignment:
Q  148 cacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattg 230  Q
    |||| ||| ||| ||||| ||||||||| |||||| |||||||||||| |||||||| |||||| ||||||||||||||||||    
T  4283116 cacgtttggtgcatacgacccaaggtacgaccaaccttatcctgaaaa-cttgcccagcaagccgaaaatcgtgtcacgattg 4283035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 226
Target Start/End: Original strand, 4743463 - 4743651
Alignment:
Q  38 tttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaa-cacttatatagctgtcttctgc-gtcaaaatcgtgtcacgttttt 135  Q
    |||||||||||||||||  ||||||| || | | | |||||||| || |||||| |||||||||||| ||||||  | ||||||  ||||| |||||||     
T  4743463 tttgatttcccaagttttcctctcttgaaccac-ctttcaaaatctgcaaagaaacacttatatagcagtcttcatctgtcaaatacgtgtgacgttttg 4743561  T
Q  136 ccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    ||  ||| ||| |||| ||||||||||||| ||| ||||| |||||| |||||||||||| | |||| | |||| | ||||||||||||||    
T  4743562 cca-aattgtgacacggttgatgcgtacgacccacggtacgaccaaccttatcctgaaaaacgtgccaagcaagtcgaaaatcgtgtcacg 4743651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 226
Target Start/End: Original strand, 42435558 - 42435666
Alignment:
Q  116 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaa 215  Q
    ||||||| ||||||| ||| ||| ||||||| |||| ||| ||||||||| ||||||||| |||||| |||||||||||| |||||| | |||| | |||    
T  42435558 caaaatcatgtcacgattt-cccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgccaagcaagacgaaa 42435655  T
Q  216 atcgtgtcacg 226  Q
    |||||||||||    
T  42435656 atcgtgtcacg 42435666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 10014955 - 10014866
Alignment:
Q  140 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattg 230  Q
    ||||||| |||||||||||| ||||| ||||||||| |||||| |||||||| ||| | |||| | || |||||||||||||||| |||||    
T  10014955 aatcgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 10014866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 11383584 - 11383499
Alignment:
Q  140 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    ||||||| |||| ||||||||||||| |||| |||| |||||| ||||| ||||||| ||||||| |||||  ||||||||||||||    
T  11383584 aatcgtgacacggttgatgcgtacgacccaaagtacgaccaaccttatcttgaaaat-ttgcccagcaagctgaaaatcgtgtcacg 11383499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 1872175 - 1872236
Alignment:
Q  20 aaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaat 81  Q
    |||||||||||| |||  ||||||||| |||||||||||||||| ||||||||| |||||||    
T  1872175 aaccctaaagttactttctttgatttctcaagtttctctctcttgaagctctccctcaaaat 1872236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 225
Target Start/End: Complemental strand, 27811094 - 27811010
Alignment:
Q  140 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcac 225  Q
    ||||||| |||| ||| ||||||| | ||||| ||| |||||| |||||||||||| |||||||| |||||| |||||||||||||    
T  27811094 aatcgtgacacgtttggtgcgtacaacccaagatacgaccaaccttatcctgaaaa-cttgcccagcaagccgaaaatcgtgtcac 27811010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 1292696 - 1292768
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctcc 73  Q
    |||||||| ||||||||| |||||||||||| | || |||||||| ||||||||  ||||||| |||||||||    
T  1292696 actctaatcaaagaccctcaaccctaaagttacctcatttgattttccaagttttcctctcttgaagctctcc 1292768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 5689203 - 5689136
Alignment:
Q  4 ctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctct 71  Q
    ||||| ||||||||| ||||||||||||   || ||||||||||| |||||||||||||| |||||||    
T  5689203 ctaatcaaagaccctcaaccctaaagttatctcctttgatttccctagtttctctctcttgaagctct 5689136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 3303906 - 3303988
Alignment:
Q  4 ctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaa 86  Q
    ||||| ||||||||| |||| ||||||| | || ||||||||||||||||| |||||||| || ||| || |||||| |||||    
T  3303906 ctaatcaaagaccctcaaccgtaaagttacctcctttgatttcccaagtttttctctcttgaacctccccctcaaaaaatgaa 3303988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 195
Target Start/End: Complemental strand, 19175445 - 19175370
Alignment:
Q  118 aaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    ||||||| |||||||||  || ||||||| |||||||| ||| ||||| |||||||| ||||||| ||||||||||||    
T  19175445 aaatcgtatcacgtttt--ccaaatcgtggcacgattggtgcatacgacccaaggtataaccaaccttatcctgaaaa 19175370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 4696320 - 4696252
Alignment:
Q  140 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaag 209  Q
    ||||||| |||| ||| ||||||||| ||||||||| |||||| |||||||||||| | |||||||||||    
T  4696320 aatcgtgtcacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cgtgcccaacaag 4696252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 6598907 - 6598836
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    |||||||| ||||||||| ||||||||||||   || |||||||||||||||||  ||||||| ||| ||||    
T  6598907 actctaatcaaagaccctcaaccctaaagttatctcctttgatttcccaagttttcctctcttgaagttctc 6598836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 6674360 - 6674289
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    |||||||| ||||||||| ||||||||||||   || |||||||||||||||||  ||||||| ||| ||||    
T  6674360 actctaatcaaagaccctcaaccctaaagttatctcctttgatttcccaagttttcctctcttgaagttctc 6674289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 40320999 - 40320940
Alignment:
Q  4 ctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctctt 63  Q
    ||||| ||||||||| ||||| |||||| | || ||||||||||| ||||||||||||||    
T  40320999 ctaatcaaagaccctcaacccgaaagttacctcctttgatttccctagtttctctctctt 40320940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 41365080 - 41365151
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    |||||||| ||||||||| |||||||||||| | || ||||||||| |||||||  ||||||| ||| ||||    
T  41365080 actctaatcaaagaccctcaaccctaaagttacctcatttgatttcacaagttttcctctcttgaagttctc 41365151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 10929735 - 10929666
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctct 71  Q
    |||||||| |||||||| || |||||||||| | || |||||||||||||||||  ||||||| |||||||    
T  10929735 actctaatcaaagaccccaa-ccctaaagttacctcctttgatttcccaagttttcctctcttgaagctct 10929666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 134
Target Start/End: Complemental strand, 19175540 - 19175448
Alignment:
Q  47 ccaagtttctctctcttcaagc---tctccttcaaaatatg-aaaagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttt 134  Q
    ||||||||||||| ||||||||   ||||||||||||  || | ||||||||||||||| | |||||| || ||||||||||| |||||||||    
T  19175540 ccaagtttctctcacttcaagctgatctccttcaaaaactgtacaagaacacttatataacagtcttcagctgtcaaaatcgtatcacgtttt 19175448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 32902439 - 32902493
Alignment:
Q  20 aaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctcct 74  Q
    |||||||||||| | || | |||||||||||||||||||||||| |||| |||||    
T  32902439 aaccctaaagttacctcatctgatttcccaagtttctctctcttgaagccctcct 32902493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 40221342 - 40221257
Alignment:
Q  140 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    ||||||| |||| ||| ||||||||| |||||| || || ||| |||||||||||| | || |||||||||  ||||||||||||||    
T  40221342 aatcgtgacacgtttggtgcgtacgacccaaggcacgacaaaccttatcctgaaaa-cgtgtccaacaagctgaaaatcgtgtcacg 40221257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10015083 - 10015030
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagttt 54  Q
    |||||||| ||||||||| |||| ||||||| | || |||||||||||||||||    
T  10015083 actctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 10015030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 29796565 - 29796618
Alignment:
Q  10 aaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctctt 63  Q
    ||||| ||| |||||||||||| | || ||||||||| ||||||||||||||||    
T  29796565 aaagatcctcaaccctaaagttacctcctttgatttctcaagtttctctctctt 29796618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 193; Significance: 1e-105; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 13342996 - 13342764
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  13342996 actctaatcagagaccctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttatat 13342897  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||    
T  13342896 agctgtcttctgcctcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatctaaggtacgaccaaccttatcctgaaaatcttg 13342797  T
Q  201 cccaacaagccaaaaatcgtgtcacgattggac 233  Q
    |||| ||||||||||||||||||||||||||||    
T  13342796 cccagcaagccaaaaatcgtgtcacgattggac 13342764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 36074277 - 36074510
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  36074277 actctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttatat 36074376  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  36074377 agctgtcttctgcgtcaaaatcatgtcacgttttttcccaatcgtgccatgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttg 36074476  T
Q  201 cccaacaagcc-aaaaatcgtgtcacgattggac 233  Q
    ||||||||||| ||||||||||||||||||||||    
T  36074477 cccaacaagccaaaaaatcgtgtcacgattggac 36074510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 25412697 - 25412465
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| |||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  25412697 actctaatcaaagaccctaaaccctaatgttgcctcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttatat 25412598  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  25412597 agatgtcttctgcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttg 25412498  T
Q  201 cccaacaagccaaaaatcgtgtcacgattggac 233  Q
    |||| ||||||||||||||||||||||||||||    
T  25412497 cccagcaagccaaaaatcgtgtcacgattggac 25412465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 30182524 - 30182291
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||| |||    
T  30182524 actctaatcaaagaccctaatccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctcattcaaaatctgcaaagaacacttttat 30182425  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgttttt-ccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  30182424 agctgtcttctgcgtcaaaatcgtgtcacgtttttcccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatctt 30182325  T
Q  200 gcccaacaagccaaaaatcgtgtcacgattggac 233  Q
    ||||| ||||||||||||||||| ||||||||||    
T  30182324 gcccagcaagccaaaaatcgtgtaacgattggac 30182291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 12 - 226
Target Start/End: Complemental strand, 37439072 - 37438856
Alignment:
Q  12 agaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatatagctgtcttct 111  Q
    ||||||| |||||||||||| | || |||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||     
T  37439072 agaccctcaaccctaaagttacctcatttgattttccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttatatagcagtcttca 37438973  T
Q  112 gcgtcaaaatcgtgtcacgt--ttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaag 209  Q
     | ||||||| |||||||||  ||||  ||||||||| |||||||||||||||||| ||||||||| || ||| ||||||||||||||||||||||||||    
T  37438972 acatcaaaattgtgtcacgtttttttttccaatcgtgtcacgattgatgcgtacgacccaaggtacgacaaaccttatcctgaaaatcttgcccaacaag 37438873  T
Q  210 ccaaaaatcgtgtcacg 226  Q
    |||||||||||||||||    
T  37438872 ccaaaaatcgtgtcacg 37438856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 13239687 - 13239463
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||| ||||||| | || |||||||| | |||||||||||||||||| |||| ||||||||| || |||||||||||||||    
T  13239687 actctaatcaaagaccctcaaccataaagttacctcctttgattttctaagtttctctctcttcaaactctacttcaaaatctgcaaagaacacttatat 13239588  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    ||| |||||| |||||||||| |||||||||||| |  |||||||| |||||||||||||||||| ||||||||| |||||| |||||||||||| ||||    
T  13239587 agcagtcttcagcgtcaaaattgtgtcacgttttccatcaatcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttg 13239489  T
Q  201 cccaacaagccaaaaatcgtgtcacg 226  Q
     ||| |||| |||| |||||||||||    
T  13239488 tccagcaagtcaaagatcgtgtcacg 13239463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 42426468 - 42426692
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||||||||||| | || ||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||    
T  42426468 actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctcttttcaagctctccttcaaaatctgcaaagaacacttatat 42426567  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    ||| |||||| || |||||||| |||||||| ||||||| ||||||| || | ||| ||||||||| ||||||||| |||||| |||||||||||| |||    
T  42426568 agcagtcttcagctgtcaaaattgtgtcacg-ttttcccaaatcgtgacatgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-ctt 42426665  T
Q  200 gcccaacaagccaaaaatcgtgtcacg 226  Q
    ||||| ||| || ||||| ||||||||    
T  42426666 gcccagcaaaccgaaaattgtgtcacg 42426692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 13488138 - 13487919
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||||||||||| | || ||||||||||||||||||||||||||| |||||||||||||||| || ||| |||||||||||    
T  13488138 actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttctagctctccttcaaaatctgcaaaaaacacttatat 13488039  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    | | |||||| || |||||||| |||||||| ||||||| ||||||| |||| ||| ||||||||| ||||||||| |||||| |||||||||||| |||    
T  13488038 aacagtcttcagctgtcaaaattgtgtcacg-ttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-ctt 13487941  T
Q  200 gcccaacaagccaaaaatcgtg 221  Q
    ||||| |||||| |||||||||    
T  13487940 gcccagcaagccgaaaatcgtg 13487919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 32636759 - 32636534
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||||||||||| | || ||||||||| ||||||||||||||| |||||||||||||||||| || |||||||||||||||    
T  32636759 actctaatcaaagacccttaaccctaaagttacctcctttgatttctcaagtttctctctctccaagctctccttcaaaatctgcaaagaacacttatat 32636660  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    ||| || ||| || ||||||||| ||||||| ||||||| ||||||| |||| ||| |||||| || ||||||||| |||||| |||||||||||| |||    
T  32636659 agcagttttcagctgtcaaaatcatgtcacg-ttttcccaaatcgtgacacgtttggtgcgtaagacccaaggtacgaccaaccttatcctgaaaaactt 32636561  T
Q  200 gcccaacaagccaaaaatcgtgtcacg 226  Q
    ||||| |||| | ||||||||| ||||    
T  32636560 gcccagcaagtcgaaaatcgtgccacg 32636534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 30683153 - 30683317
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| ||||||||| || | || | |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  30683153 actctaatcaaagaccctcaaccctaaaattacctcctctgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttatat 30683252  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacga 165  Q
    ||| || ||| ||||||||||||||||||||||| ||  ||| ||| ||||||||||||||||||    
T  30683253 agcagttttcagcgtcaaaatcgtgtcacgttttcccaaaattgtgtcacgattgatgcgtacga 30683317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 48 - 231
Target Start/End: Complemental strand, 19806294 - 19806112
Alignment:
Q  48 caagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtg 146  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||| || ||||||||||||||||| ||||||| | |||||    
T  19806294 caagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg-ttttcccaagtcgtg 19806196  T
Q  147 ccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattgg 231  Q
     |||| ||| ||||||||| ||||||||| |||||| ||||||| |||| | |||| | |||||| |||||||||||||||||||    
T  19806195 acacgtttggtgcgtacgacccaaggtacgaccaaccttatcct-aaaaacgtgcctagcaagccgaaaatcgtgtcacgattgg 19806112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 533704 - 533540
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||  |||||||||||| | || ||||||||||||| ||||||||||||||| |||||||||||||| || ||| |||||||||||    
T  533704 actctaatcaaagacccccaaccctaaagttacctcctttgatttcccaaatttctctctcttcaacctctccttcaaaatctgcaaaaaacacttatat 533605  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacga 165  Q
    ||| |||||| || ||||||||||||||||| ||||||| ||||||| |||| ||| |||||||||    
T  533604 agcagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacgtttggtgcgtacga 533540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 28750888 - 28751023
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttata 99  Q
    |||||||| ||||||||| |||||||||||| | || ||||||||||||||||||||||||||||||||||| |||||||| || | |||||||||||||    
T  28750888 actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctctctttcaaaatctgcataagaacacttata 28750987  T
Q  100 tagctgtcttctgc-gtcaaaatcgtgtcacgtttt 134  Q
    |||| | |||| || |||||||||||||||||||||    
T  28750988 tagcagacttcagctgtcaaaatcgtgtcacgtttt 28751023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 49 - 195
Target Start/End: Original strand, 14520543 - 14520689
Alignment:
Q  49 aagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtg 146  Q
    ||||||||||||||||||||||||||||||||| || | ||||||||||||||||  |||| | || |||||||||||||||||||||  || |||||||    
T  14520543 aagtttctctctcttcaagctctccttcaaaatctgcacaagaacacttatataggagtctccagctgtcaaaatcgtgtcacgtttt--ccaaatcgtg 14520640  T
Q  147 ccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
     ||||||| |||||||||| ||||||||| |||||| ||||||||||||    
T  14520641 acacgattaatgcgtacgacccaaggtacgaccaaccttatcctgaaaa 14520689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 42428663 - 42428875
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||| | ||||||||||||   || |||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||    
T  42428663 actctaatcaaagaccttcaaccctaaagttatctcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacatttatat 42428762  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    ||| |||||| |  ||||||||||||||| ||||| ||  ||||||| |||| ||| |||||||||            ||||| ||||||| |||| |||    
T  42428763 agcagtcttcagttgtcaaaatcgtgtcaggtttt-cctaaatcgtgacacgtttggtgcgtacga------------ccaaccttatcctaaaaa-ctt 42428848  T
Q  200 gcccaacaagccaaaaatcgtgtcacg 226  Q
    ||||| |||||||||||||||||||||    
T  42428849 gcccagcaagccaaaaatcgtgtcacg 42428875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 12083963 - 12083815
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||| |||| |||||||||||||||| || | ||||||||||||||||| ||||||  | |||||||| ||||||||||||  || |||||    
T  12083963 ccaagtttctctcacttctagctctccttcaaaatctgcacaagaacacttatatagcagtcttcaactgtcaaaattgtgtcacgtttt--ccaaatcg 12083866  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||| ||| ||||| ||||||||| |||||| ||||||||||||    
T  12083865 tgacacgattggtgcatacgacccaaggtacgaccaaccttatcctgaaaa 12083815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 11916758 - 11916609
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||| ||||||||||||||||||||| || | ||||||||||||||||| || |||  | ||||||||||||||||| ||||| | |||||    
T  11916758 ccaagtttctctcacttcaagctctccttcaaaatctgcacaagaacacttatatagcagttttcaactgtcaaaatcgtgtcacg-ttttctcaaatcg 11916660  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    ||  ||||||| ||||||||| ||||||||| |||||| | ||||||||||    
T  11916659 tgatacgattggtgcgtacgacccaaggtacgaccaacctgatcctgaaaa 11916609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 39468782 - 39468864
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatat 83  Q
    |||||||| ||||||||| |||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||    
T  39468782 actctaatgaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctctccttcaaaatat 39468864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 189
Target Start/End: Original strand, 16649857 - 16650044
Alignment:
Q  3 tctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaag-aacacttatata 101  Q
    |||||| ||||||| | |||||||||||| | || |||||||||||||||||  ||||||| || || || |||||||| || |||| ||||||||||||    
T  16649857 tctaatcaaagaccatcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaacctatcattcaaaatctgcaaagaaacacttatata 16649956  T
Q  102 gctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcc 189  Q
    |  |||||  || ||||||||| ||||||  |||| || ||||||| |||| ||| ||||||||||||||||||| |||||| ||||||    
T  16649957 gtagtctttagctgtcaaaatcatgtcac-attttgccaaatcgtgacacggttggtgcgtacgatccaaggtacgaccaaccttatcc 16650044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 27015133 - 27015020
Alignment:
Q  116 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaa 215  Q
    ||||||||||||||| ||| ||| ||||||| |||| ||| ||||||||| ||||||||| |||||| |||||||||||| | ||||||||||||  |||    
T  27015133 caaaatcgtgtcacgattt-cccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-catgcccaacaagctgaaa 27015036  T
Q  216 atcgtgtcacgattgg 231  Q
    ||||||||||||||||    
T  27015035 atcgtgtcacgattgg 27015020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 29720307 - 29720228
Alignment:
Q  1 actctaattaaaga-ccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaa 79  Q
    |||||||| ||||| |||||||||||| ||||||| | ||||||||||||||||||||||||||| | ||||||||||||    
T  29720307 actctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtttctctctcttccaactctccttcaaa 29720228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 226
Target Start/End: Complemental strand, 5057650 - 5057542
Alignment:
Q  116 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaa 215  Q
    ||||||||||||||||||| ||| ||| ||| |||| ||||||||||||| | ||||||| |||||| |||||||||||| ||||| ||||||| | |||    
T  5057650 caaaatcgtgtcacgtttt-cccaaattgtgacacggttgatgcgtacgaccaaaggtacgaccaaccttatcctgaaaa-cttgctcaacaagtcgaaa 5057553  T
Q  216 atcgtgtcacg 226  Q
    || ||||||||    
T  5057552 attgtgtcacg 5057542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 9789451 - 9789528
Alignment:
Q  2 ctctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaa 79  Q
    ||||||| |||||| |||||||||| |||| || | ||||||||||||||||||||||||||| | ||||||||||||    
T  9789451 ctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctctcttccaactctccttcaaa 9789528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 18441875 - 18441952
Alignment:
Q  2 ctctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaa 79  Q
    ||||||| |||||| |||||||||| |||| || | ||||||||||||||||||||||||||| | ||||||||||||    
T  18441875 ctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctctcttccaactctccttcaaa 18441952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 9353118 - 9352972
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    |||||||||||||||||||  ||||||  |||||| || | ||||||||||| ||| | |||||| || |  ||||||||| ||||||||  || |||||    
T  9353118 ccaagtttctctctcttcatcctctcc--caaaatctgcacaagaacacttaaataccagtcttcagctgataaaatcgtgccacgtttt--ccaaatcg 9353023  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    |||||||||||||  |||||| ||||||||| |||||| ||||||||||||    
T  9353022 tgccacgattgatatgtacgacccaaggtacgaccaaccttatcctgaaaa 9352972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 114 - 226
Target Start/End: Original strand, 16650969 - 16651079
Alignment:
Q  114 gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaa 213  Q
    |||||||||||||||| |||| ||  ||||||| |||| ||| ||||||||||||||||||| |||||| |||||||||||| | | |||||||||  |     
T  16650969 gtcaaaatcgtgtcacattttgcca-aatcgtgacacggttggtgcgtacgatccaaggtacgaccaaccttatcctgaaaa-cgtacccaacaagttat 16651066  T
Q  214 aaatcgtgtcacg 226  Q
    |||||||||||||    
T  16651067 aaatcgtgtcacg 16651079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 29722467 - 29722388
Alignment:
Q  1 actctaattaaaga-ccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaa 79  Q
    |||||||| ||||| |||||||||||| ||||||| | ||||||||||||||||||||||| ||| | ||||||||||||    
T  29722467 actctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtttctctcttttccaactctccttcaaa 29722388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 29751385 - 29751464
Alignment:
Q  1 actctaattaaaga-ccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaa 79  Q
    |||||||| ||||| |||||||||||| ||||||| | ||||||||||||||| ||||||||||| | ||||||||||||    
T  29751385 actctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtctctctctcttccaactctccttcaaa 29751464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 16409416 - 16409321
Alignment:
Q  2 ctctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacactta 97  Q
    ||||||| |||||| |||||||||| |||| || | ||||||||||||||||||||||||||| | |||| ||||||||| || | |||||||||||    
T  16409416 ctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctctcttccaactct-cttcaaaatctgcacaagaacactta 16409321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 227
Target Start/End: Complemental strand, 535699 - 535613
Alignment:
Q  140 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacga 227  Q
    ||||||| |||| ||| ||| ||||| ||||||||| |||||| |||||||||||| |||| ||| |||||| |||||||||||||||    
T  535699 aatcgtgacacgtttggtgcatacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacga 535613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 11181618 - 11181555
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatatagctgtcttc 110  Q
    ||||||||||||||||||||||||| ||||||||  || |||||||||||||||| | ||||||    
T  11181618 ccaagtttctctctcttcaagctctacttcaaaaactgcaaagaacacttatataacagtcttc 11181555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 26177824 - 26177746
Alignment:
Q  2 ctctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaat 81  Q
    ||||||| |||||| |||||||||| |||| || | ||||||||||||||||||||||||||| | |||| |||||||||    
T  26177824 ctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctctcttccaactct-cttcaaaat 26177746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 36932134 - 36931987
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||||||||| |||||||| |||||  || | ||||||||||| ||| | |||||| || |  ||||||||| |||| |||||   ||| |    
T  36932134 ccaagtttctctctcttca-gctctcctccaaaaactgcacaagaacacttaaataccagtcttcagctgataaaatcgtgccacgattttca--aattg 36932038  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||||| ||||||| ||||||||| |||||| ||||||||||||    
T  36932037 tgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaa 36931987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 42926828 - 42926738
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaa 91  Q
    |||||||| ||||||| | || ||||||||| | || ||||||||||||||||| |||||||| |||||||| | |||||| |||| ||||    
T  42926828 actctaatcaaagaccatcaatcctaaagttacctcatttgatttcccaagtttttctctcttgaagctctcatccaaaatctgaacagaa 42926738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 26170712 - 26170620
Alignment:
Q  5 taattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacactta 97  Q
    |||| |||||| |||||||||| |||| || | ||||||||||||||||||||||||||| | |||| ||||||||| || | |||||||||||    
T  26170712 taatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctctcttccaactct-cttcaaaatctgcacaagaacactta 26170620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 209
Target Start/End: Complemental strand, 31004868 - 31004777
Alignment:
Q  117 aaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaag 209  Q
    |||| |||||||||||| |||  ||||||| |||||||| ||||||||| |||| ||||||||||| ||||||| |||| | |||||| ||||    
T  31004868 aaaaacgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacgacccaaagtacaaccaaccttatcctaaaaaacgtgcccagcaag 31004777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 42310171 - 42310227
Alignment:
Q  4 ctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctct 60  Q
    ||||| ||||||| |||||||||||||| | || |||||||||||||||||||||||    
T  42310171 ctaatcaaagaccataaaccctaaagttacctcctttgatttcccaagtttctctct 42310227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 535760 - 535685
Alignment:
Q  59 ctcttcaagctctccttcaaaatatgaaaagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgttt 133  Q
    |||||||| |||||||||||||| || |||||||| ||||||| | |||||| || |||||||||||| |||||||    
T  535760 ctcttcaacctctccttcaaaatctgcaaagaacaattatatatcagtcttcagctgtcaaaatcgtgacacgttt 535685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 537960 - 537901
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctct 60  Q
    |||||||| ||||||||| |||||||||||| | || |||||||| ||||||||||||||    
T  537960 actctaatcaaagaccctcaaccctaaagttacctcctttgattttccaagtttctctct 537901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 16452016 - 16451937
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaa 80  Q
    |||||||| ||||| ||| |||||||||||| | || |||||||||||||||||  ||||||| ||||||| | ||||||    
T  16452016 actctaatcaaagatcctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaagctcttcctcaaaa 16451937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 31182908 - 31182837
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    |||||||| ||||||||| |||||||||||| | || |||||||||||||||||  ||||||| ||| ||||    
T  31182908 actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaagttctc 31182837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 15464845 - 15464963
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    |||||||||||||||||||||||||||| |||||| || | ||||||||||| |||   ||||||| | |  ||||||||| |||| |||  || |||||    
T  15464845 ccaagtttctctctcttcaagctctcctccaaaatctgcacaagaacacttaaatactagtcttctactgataaaatcgtgccacgattt--ccaaatcg 15464942  T
Q  145 tgccacgattgatgcgtacga 165  Q
    || |||||||||| |||||||    
T  15464943 tgtcacgattgatacgtacga 15464963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 17003745 - 17003689
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaaaag-aacacttatatag 102  Q
    ||||||||||||||||  ||||||||||||||||| || |||| |||||||||||||    
T  17003745 ccaagtttctctctctcaaagctctccttcaaaatctgcaaagaaacacttatatag 17003689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 5887649 - 5887720
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    |||||||| ||| ||||| |||||||||||| | || |||||||||||||||||  ||||||| ||| ||||    
T  5887649 actctaatcaaataccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaagttctc 5887720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 39468912 - 39468994
Alignment:
Q  148 cacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattgg 231  Q
    |||| ||| ||| ||||| ||||||||| |||||| ||||||| |||| | || ||| |||||| |||||||||||||||||||    
T  39468912 cacgtttggtgcatacgacccaaggtacgaccaaccttatcctaaaaa-cgtgtccagcaagccgaaaatcgtgtcacgattgg 39468994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 533540 - 533488
Alignment:
Q  177 accaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattg 230  Q
    |||||| |||||||||||| |||||||| |||||| |||| |||||||||||||    
T  533540 accaaccttatcctgaaaa-cttgcccagcaagccgaaaaccgtgtcacgattg 533488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 24514993 - 24515225
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||    
T  24514993 actctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctccccttcaaaatctgcaaagaacacttatat 24515092  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  24515093 agctgtcttctgcgtctaaatcgtgtcgcgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttg 24515192  T
Q  201 cccaacaagccaaaaatcgtgtcacgattggac 233  Q
    |||| |||||||||||| |||||||||||||||    
T  24515193 cccagcaagccaaaaattgtgtcacgattggac 24515225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 4178710 - 4178482
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||| || ||||||||||| |||    
T  4178710 actctaatcaaagaccctaaaccctaaagttgcttcctttgatttctcaagtttctctctcttcaagctcaccttcaaaatctgcaaagaacacttttat 4178611  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  4178610 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcttgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttg 4178511  T
Q  201 cccaacaagccaaaaatcgtgtcacgatt 229  Q
    || ||||||||||||||||||||||||||    
T  4178510 cctaacaagccaaaaatcgtgtcacgatt 4178482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 35853850 - 35853616
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||| ||| ||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||| || |||||||||||||||    
T  35853850 actcaaatcaaagaccctaaaccctaaagttgctacctttgatttcctaagtttctctctcttcaagctcttcttcaaaatctgcaaagaacacttatat 35853751  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgt--ttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatct 198  Q
    |||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||| ||| || |||||||||||| ||    
T  35853750 agctgtcttctgcgtcaaaatcgtgtcacgtttttttctccaatcgtgccacgattgatgcgtacgatccaaggtacgaccgaccttatcctgaaaaact 35853651  T
Q  199 tgcccaacaagccaaaaatcgtgtcacgattggac 233  Q
    |||||| |||||||||||||||||| |||||||||    
T  35853650 tgcccagcaagccaaaaatcgtgtcgcgattggac 35853616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 29990990 - 29990757
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| |||||||||||||||||||||||  || ||||||||||||||||||||||||||||| ||| |||||||||| || |||||||||||||||    
T  29990990 actctaatcaaagaccctaaaccctaaagttgtctcctttgatttcccaagtttctctctcttcaaactcaccttcaaaatctgcaaagaacacttatat 29990891  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    |||  ||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||  |||||||| | |||  ||||||| |||||||||    
T  29990890 agcaatcttcagcgtcgaaatcgtgtcacatttttccccaatcgtgccacgattgatgcgtacgactcaaggtacgatcaatcttatcctaaaaatcttg 29990791  T
Q  201 cccaacaagcca-aaaatcgtgtcacgattggac 233  Q
    |||| ||||||| |||||||||||||||||||||    
T  29990790 cccagcaagccaaaaaatcgtgtcacgattggac 29990757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 23554975 - 23554750
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||| | |||||| ||||| | || |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  23554975 actctaatcaaagaccttcaaccctgaagttacctcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttatat 23554876  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    ||| |||||| ||||||||||||||||||||||| |   ||||||| |||||||||||||||||| |||| |||| |||||| |||||||||||| ||||    
T  23554875 agcagtcttcagcgtcaaaatcgtgtcacgttttccattaatcgtgtcacgattgatgcgtacgacccaatgtacgaccaaccttatcctgaaaaacttg 23554776  T
Q  201 cccaacaagccaaaaatcgtgtcacg 226  Q
    |||| |||| | ||||||||||||||    
T  23554775 cccagcaagtcgaaaatcgtgtcacg 23554750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 20 - 231
Target Start/End: Original strand, 2761554 - 2761764
Alignment:
Q  20 aaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatatagctgtcttctgc-gtcaa 118  Q
    |||||||||||| | || ||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| |||||| || |||||    
T  2761554 aaccctaaagttacctcctttgatttcccaagtttatctctcttcaagctctccttcaaaatctgcaaagaacacttatatagcagtcttcagctgtcaa 2761653  T
Q  119 aatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatc 218  Q
    |||||||||||| ||||||| ||||||| |||| ||| ||||||||| ||||||||| |||||  |||||||||||| |||||||| |||||  ||||||    
T  2761654 aatcgtgtcacg-ttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaatcttatcctgaaaa-cttgcccagcaagctgaaaatc 2761751  T
Q  219 gtgtcacgattgg 231  Q
    |||||||||||||    
T  2761752 gtgtcacgattgg 2761764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 18126579 - 18126355
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||||||||||| | || ||||||||||||||||||||||| |||||||||| ||||||||| || |||||||||||||||    
T  18126579 actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctattcaagctcttcttcaaaatctgcaaagaacacttatat 18126480  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    | | |||||  || ||||||||||||||||| ||||| | ||||||| |||| ||| ||||||||| ||||||||| |||||| |||||||||||| |||    
T  18126479 atcagtctttagctgtcaaaatcgtgtcacg-ttttctcaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaacattatcctgaaaa-ctt 18126382  T
Q  200 gcccaacaagccaaaaatcgtgtcacg 226  Q
    |||||||||||| |||||||| |||||    
T  18126381 gcccaacaagccgaaaatcgtatcacg 18126355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 47676369 - 47676593
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| ||||||||||||   || |||||||||||||||||||||||||||||||||  ||||||||| || |||||||||||||||    
T  47676369 actctaatcaaagaccctcaaccctaaagttatctcctttgatttcccaagtttctctctcttcaagctcctcttcaaaatctgcaaagaacacttatat 47676468  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    | | ||||||  | |||||||| |||||||| ||||||  ||||||| |||| ||| ||||||||| ||||||||| |||||| |||||||||||| |||    
T  47676469 atcagtcttcaactgtcaaaattgtgtcacg-ttttccaaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-ctt 47676566  T
Q  200 gcccaacaagccaaaaatcgtgtcacg 226  Q
    ||||| |||||| ||||||||||||||    
T  47676567 gcccagcaagccgaaaatcgtgtcacg 47676593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 1113592 - 1113360
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaag-aacacttata 99  Q
    |||||||| ||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||| |||| ||||||||| || | || ||||||||||    
T  1113592 actctaatcaaagaccctcaaccctaaagttacttcctttgatttcccaagtttctctctcttcaacctcttcttcaaaatctgcacagaaacacttata 1113493  T
Q  100 tagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaat-cgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatc 197  Q
    || | || ||| || |||||||||||||||||||||   ||||| |||| |||| ||| ||||||||| ||||||||| |||||| |||||||||||||     
T  1113492 taacagtattcagctgtcaaaatcgtgtcacgtttt--gccaatacgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaat- 1113396  T
Q  198 ttgcccaacaagccaaaaatcgtgtcacgattggac 233  Q
    ||||||| || ||| |||||||||||||||||||||    
T  1113395 ttgcccatcaggccgaaaatcgtgtcacgattggac 1113360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 14070066 - 14070291
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| | |||||||||| | || ||||||||||||||||||||||||||||||| |||||| |||||  | |||||||||||||||    
T  14070066 actctaatcaaagaccctcagccctaaagttacctcctttgatttcccaagtttctctctcttcaagccctcctttaaaatcggcaaagaacacttatat 14070165  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    | | |||||| || ||||||||||||||||| ||||||| ||||||| |||| ||| ||| ||||| ||||||||| |||||| ||||| |||||| |||    
T  14070166 aacagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacgtttggtgcatacgacccaaggtacgaccaaccttatcttgaaaaactt 14070264  T
Q  200 gcccaacaagccaaaaatcgtgtcacg 226  Q
    ||| | |||| | ||||||||||||||    
T  14070265 gcctagcaagtcgaaaatcgtgtcacg 14070291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 14380094 - 14380319
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| | |||||||||| | || ||||||||||||||||||||||||||||||| |||||| |||||  | |||||||||||||||    
T  14380094 actctaatcaaagaccctcagccctaaagttacctcctttgatttcccaagtttctctctcttcaagccctcctttaaaatcggcaaagaacacttatat 14380193  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    | | |||||| || ||||||||||||||||| ||||||| ||||||| |||| ||| ||| ||||| ||||||||| |||||| ||||| |||||| |||    
T  14380194 aacagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacgtttggtgcatacgacccaaggtacgaccaaccttatcttgaaaaactt 14380292  T
Q  200 gcccaacaagccaaaaatcgtgtcacg 226  Q
    ||| | |||| | ||||||||||||||    
T  14380293 gcctagcaagtcgaaaatcgtgtcacg 14380319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 4586096 - 4585872
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||| ||| |||||||||||| | || ||||||||||||||||| ||||||||| | |||||||||||||| || |||||||||||||||    
T  4586096 actctaatcaaagagcctcaaccctaaagttacatcctttgatttcccaagtttttctctcttctaactctccttcaaaatctgcaaagaacacttatat 4585997  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    | | |||||  || ||||||||||||||||  ||||||| ||||||| || | ||| ||||||||| ||||||||| |||||| ||||  |||||| |||    
T  4585996 aacagtctttagctgtcaaaatcgtgtcac-attttcccaaatcgtgacatgtttggtgcgtacgacccaaggtacgaccaaccttatattgaaaa-ctt 4585899  T
Q  200 gcccaacaagccaaaaatcgtgtcacg 226  Q
     |||||||||||||||||| |||||||    
T  4585898 acccaacaagccaaaaatcttgtcacg 4585872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 47674176 - 47674400
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||| | |||| | ||||| | || |||||||||||||||||||||||||||||||||  ||||||||| || ||||||||| |||||    
T  47674176 actctaatcaaagaccttcaaccttgaagttacctcctttgatttcccaagtttctctctcttcaagctcctcttcaaaatctgcaaagaacacctatat 47674275  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    ||| |||||| || ||||||||| ||||| | ||||||  ||||||| |||| ||| ||||||| | ||||||||| |||||| |||||||||||| |||    
T  47674276 agcagtcttcagctgtcaaaatcatgtcatg-ttttccaaaatcgtgacacgtttggtgcgtacaacccaaggtacgaccaaccttatcctgaaaa-ctt 47674373  T
Q  200 gcccaacaagccaaaaatcgtgtcacg 226  Q
    ||||| |||||| ||||||||||||||    
T  47674374 gcccagcaagccgaaaatcgtgtcacg 47674400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 30024965 - 30025099
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||||||||||| | || ||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||    
T  30024965 actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctctcattcaaaatctgcaaagaacacttatat 30025064  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttt 134  Q
    ||  |||||| || |||||||||||||||||||||    
T  30025065 agtagtcttcagctgtcaaaatcgtgtcacgtttt 30025099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 49092000 - 49092150
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||||||||||||||||||||||||| || | ||||||||||||||||| |||||| || |||||||||||||||||||||   | |||||    
T  49092000 ccaagtttctctctcttcaagctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttgttcaaatcg 49092099  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || ||| |||| ||| ||||||||||||||| |||||| ||||||||||||    
T  49092100 tgtcactattggtgcatacgatccaaggtacgaccaaccttatcctgaaaa 49092150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 96 - 216
Target Start/End: Complemental strand, 19495811 - 19495691
Alignment:
Q  96 tatatagctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    |||||| | |||||| ||||| |||||||||||||||||||||  |||||| |||||||||||||||||| ||||||||| |||||| ||||||||||||    
T  19495811 tatatatcagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaa 19495712  T
Q  196 tcttgcccaacaagccaaaaa 216  Q
    ||||||||| |||||||||||    
T  19495711 tcttgcccagcaagccaaaaa 19495691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 47 - 230
Target Start/End: Complemental strand, 46516091 - 46515911
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgt 145  Q
    ||||||||||||||||  |||||| |||||||||| || |||||||||||||||||| |||||| || ||||||||||||||||| |||| || ||||||    
T  46516091 ccaagtttctctctct--aagctccccttcaaaatctgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg-ttttgccaaatcgt 46515995  T
Q  146 gccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattg 230  Q
    | || | ||| ||| ||||| |||||||   |||||| |||||||||||| | ||||||||||||||||||||||| ||||||||    
T  46515994 gacatgcttggtgcatacgacccaaggtgtgaccaaccttatcctgaaaa-cgtgcccaacaagccaaaaatcgtgacacgattg 46515911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 26417251 - 26417025
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaag-----aacact 95  Q
    |||||||| ||||||||| |||||||||||| | || ||||||||| ||||||  | |||||||||||||| ||||||||| || ||||     ||||||    
T  26417251 actctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtt--tatctcttcaagctcttcttcaaaatctgcaaagaaattaacact 26417154  T
Q  96 tatatagctgtcttc-tgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaa 194  Q
    |||||||| ||||||   ||||||||||||||||||  ||  || ||||||| |||| ||| ||||||||| ||||||||| |||||| ||| |||||||    
T  26417153 tatatagcagtcttcaaccgtcaaaatcgtgtcacg-attggccaaatcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttaccctgaaa 26417055  T
Q  195 atcttgcccaacaagccaaaaatcgtgtcac 225  Q
    | |||| ||||||| | ||||||||||||||    
T  26417054 a-cttgtccaacaaactaaaaatcgtgtcac 26417025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 48491514 - 48491282
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttata 99  Q
    |||||||| ||||||||| |||||||||||| | || ||||||||  ||||||||||||||||||| |||| ||||||||| || | ||||||||||| |    
T  48491514 actctaatcaaagaccctcaaccctaaagttacctcctttgatttatcaagtttctctctcttcaacctcttcttcaaaatctgcacaagaacacttaaa 48491415  T
Q  100 tagctgtcttctgcg-tcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatct 198  Q
    |||    || |  |  |||||||| ||||||||||| ||  ||||||| |||| ||| ||||||||| ||||||||| |||||| | ||| |||||  |     
T  48491414 tagtaccctgcaactatcaaaatcatgtcacgttttgcca-aatcgtgacacggttggtgcgtacgacccaaggtacgaccaacctaatcttgaaag-cg 48491317  T
Q  199 tgcccaacaagccaaaaatcgtgtcacgattggac 233  Q
    ||||||||||||| |||||||||||||||||||||    
T  48491316 tgcccaacaagccgaaaatcgtgtcacgattggac 48491282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 31733202 - 31733359
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| ||| |||||||| | |||||||||||| ||||||||||||||||| |||| | ||||||||| || |||||||||||||||    
T  31733202 actctaatcaaagaccctcaactctaaagttacctcttttgatttctcaagtttctctctcttccagcttttcttcaaaatctgcaaagaacacttatat 31733301  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacga 165  Q
    ||| ||||      |||||||||||||||| ||||||| ||||||  |||| ||| |||||||||    
T  31733302 agcagtct------tcaaaatcgtgtcacg-ttttcccaaatcgttacacgtttggtgcgtacga 31733359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 21989219 - 21989367
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||| ||||||||||||||||||||| || | ||||||||||||||||| |||||| || |||||||||||||||| ||||  || ||||     
T  21989219 ccaagtttctctcacttcaagctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacatttt--ccaaatca 21989316  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||| |||||| || ||||||||| | |||| ||||||||||||    
T  21989317 tgacacgattgctgcgtatgacccaaggtacgatcaaccttatcctgaaaa 21989367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 44847911 - 44847763
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||||||||||||||| |  |||||| |  | ||||||||||||||||| |||||| || |  ||||||||| ||||||||  || |||||    
T  44847911 ccaagtttctctctcttcaagctcttcaccaaaatctacacaagaacacttatatagccgtcttcagctgataaaatcgtgccacgtttt--ccaaatcg 44847814  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    ||||||||||||| ||||||| ||||||||| |||||| ||||||||||||    
T  44847813 tgccacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaa 44847763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 48489366 - 48489141
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttata 99  Q
    |||||||| ||||||| | |||||||||||| | || ||||||||||||||||||||| ||||||| |||| ||||||||| || | ||||||||||| |    
T  48489366 actctaatcaaagaccatcaaccctaaagttacctcctttgatttcccaagtttctctatcttcaatctcttcttcaaaatctgcacaagaacacttaaa 48489267  T
Q  100 tagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatct 198  Q
    |||    || |  | ||||||||| ||||||| |||| || ||||||| |||||||| ||||||| | ||||||||  |||||| ||||||||  || |     
T  48489266 tagtaccctgcaactgtcaaaatcatgtcacg-ttttgccaaatcgtgacacgattggtgcgtacaacccaaggtatgaccaaccttatcctg-gaagca 48489169  T
Q  199 tgcccaacaagccaaaaatcgtgtcacg 226  Q
    |||||| ||||||||||| |||||||||    
T  48489168 tgcccagcaagccaaaaaccgtgtcacg 48489141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 2647483 - 2647334
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgcg-tcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||||||  || |||||||||||||| || | |||||||||| |||||| |||||| ||  |||||||||| |||||||| |||  |||||    
T  2647483 ccaagtttctctctctaaaatctctccttcaaaatctgcacaagaacacttttatagcagtcttcagctctcaaaatcgtatcacgtttgtcca-aatcg 2647385  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  2647384 tgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 2647334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 87 - 195
Target Start/End: Original strand, 21983595 - 21983702
Alignment:
Q  87 aagaacacttatatagctgtcttctgcg-tcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaacttt 185  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||  || ||||||| ||| |||| ||||||||| ||||||||| |||||| ||    
T  21983595 aagaacacttatatagctgtcttcagcggtcaaaatcgtgtcacgtttt--ccaaatcgtgacacaattggtgcgtacgacccaaggtacgaccaacctt 21983692  T
Q  186 atcctgaaaa 195  Q
    ||||||||||    
T  21983693 atcctgaaaa 21983702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 19502113 - 19502013
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||||||||||| | || ||||||||| ||||||| |||||||| ||||||||||||||||| || |||||||| ||||||    
T  19502113 actctaatcaaagaccctcaaccctaaagttacctcatttgatttctcaagtttgtctctctttaagctctccttcaaaatctgcaaagaacatttatat 19502014  T
Q  101 a 101  Q
    |    
T  19502013 a 19502013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 43864175 - 43864080
Alignment:
Q  5 taattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||| ||||||||| |||||||||||| | || |||||||||||||||||||||||||||||||| | ||||||||| |  |||||||||||||||    
T  43864175 taatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctattcttcaaaatctacaaagaacacttatat 43864080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 25767187 - 25767283
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacactta 97  Q
    |||||||| ||||||||||||||||| ||||||| | ||||||||| ||||||||||||||||| |||||||||||||||| || | |||||||||||    
T  25767187 actctaatcaaagaccctaaaccctagagttgctccctttgatttctcaagtttctctctcttc-agctctccttcaaaatctgcacaagaacactta 25767283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 226
Target Start/End: Complemental strand, 33332236 - 33332057
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaaaag-aacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    |||||||||| |||||  ||||||||||||||||| || |||| |||||| ||||||| ||||||  | ||||||||||||||||  || | || |||||    
T  33332236 ccaagtttctatctctcaaagctctccttcaaaatctgcaaagaaacactaatatagcagtcttcaactgtcaaaatcgtgtcacaattgt-ccaaatcg 33332138  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    || |||||||| ||||||||| ||||||||| |||||| ||||| |||||||  |||||| ||||   ||||||||||||||    
T  33332137 tgacacgattggtgcgtacgacccaaggtacgaccaaccttatcttgaaaat-gtgcccagcaagttgaaaatcgtgtcacg 33332057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 2479647 - 2479795
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||||||||||||||| || |||||| || | |||||||||||||||   ||||||  | |  ||||||||| ||||||||  || ||||     
T  2479647 ccaagtttctctctcttcaagctcttctccaaaatctgcacaagaacacttatatactagtcttcaactgataaaatcgtgccacgtttt--ccaaatca 2479744  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    ||||| ||||||||||||||| ||||||||| |||||| ||||||||||||    
T  2479745 tgccatgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaa 2479795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 226
Target Start/End: Original strand, 6360479 - 6360587
Alignment:
Q  116 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaa 215  Q
    ||||||||||||||  ||| ||| ||||||| |||| ||| ||||||||| ||||| ||| |||||| |||||||||||| ||||||||||||||| |||    
T  6360479 caaaatcgtgtcacaattt-cccaaatcgtgacacgtttggtgcgtacgacccaagatacgaccaacattatcctgaaaa-cttgcccaacaagccgaaa 6360576  T
Q  216 atcgtgtcacg 226  Q
    |||||||||||    
T  6360577 atcgtgtcacg 6360587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 48408737 - 48408674
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttc 64  Q
    |||||||| ||||||||||||||||| ||||||| | |||||||||||||||||||||||||||    
T  48408737 actctaatcaaagaccctaaaccctagagttgctccctttgatttcccaagtttctctctcttc 48408674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 79699 - 79849
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||||||||||||||||||||||||| || | |||||||| |||||||  ||||||  | |||| ||||||||||| ||||  || |||||    
T  79699 ccaagtttctctctcttcaagctctccttcaaaatctgcacaagaacacatatatagtagtcttcaactgtcagaatcgtgtcacattttgtccaaatcg 79798  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |  ||||| ||| || || |||| |||| |||||| ||||||||||||    
T  79799 tgacgtgattggtgcatatgacccaatgtacgaccaaccttatcctgaaaa 79849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 114 - 224
Target Start/End: Complemental strand, 27347744 - 27347636
Alignment:
Q  114 gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaa 213  Q
    |||||||||||||||| |||| ||| || |||| |||| ||| ||||||||| ||||||||| |||||| |||||||||||| |||||||| |||||| |    
T  27347744 gtcaaaatcgtgtcacatttt-cccaaaccgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgcccagcaagccga 27347647  T
Q  214 aaatcgtgtca 224  Q
    ||||| |||||    
T  27347646 aaatcatgtca 27347636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 226
Target Start/End: Original strand, 4538853 - 4539008
Alignment:
Q  71 tccttcaaaatatgaaaagaa-cacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatcc 168  Q
    ||||||||||| || |||||| |||||||||||| |||||  || |||||||||||||||  |||| ||  ||||||| |||| ||| ||||||||||||    
T  4538853 tccttcaaaatctgcaaagaaacacttatatagcagtctttagctgtcaaaatcgtgtcatattttgcca-aatcgtgacacgtttggtgcgtacgatcc 4538951  T
Q  169 aaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    ||||||| |||||| || ||||||||| |||||  | ||| || ||||||||||||||    
T  4538952 aaggtacgaccaaccttgtcctgaaaa-cttgcttagcaaaccgaaaatcgtgtcacg 4539008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 39731310 - 39731215
Alignment:
Q  2 ctctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacactta 97  Q
    ||||||| ||||||||||||||||| |||| || | ||||||||||||||||||||||||||| | |||| ||||||||| || | |||||||||||    
T  39731310 ctctaatcaaagaccctaaaccctagagttactccctttgatttcccaagtttctctctcttccaactct-cttcaaaatctgcacaagaacactta 39731215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 12098108 - 12098175
Alignment:
Q  4 ctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctct 71  Q
    ||||| ||||||||| |||||||||||| | || ||||||||||||||||| |||||||| |||||||    
T  12098108 ctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttttctctcttgaagctct 12098175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 41317683 - 41317750
Alignment:
Q  4 ctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctct 71  Q
    ||||| ||||||||| |||||||||||| | || ||||||||||| |||||||||||||| |||||||    
T  41317683 ctaatcaaagaccctcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctct 41317750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 110
Target Start/End: Original strand, 2759071 - 2759121
Alignment:
Q  60 tcttcaagctctccttcaaaatatgaaaagaacacttatatagctgtcttc 110  Q
    |||||||||||||||||||||| || |||||||||||||||||| ||||||    
T  2759071 tcttcaagctctccttcaaaatctgcaaagaacacttatatagcagtcttc 2759121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 230
Target Start/End: Complemental strand, 6570520 - 6570300
Alignment:
Q  10 aaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaag-aacacttatatagctgtct 108  Q
    |||||| || || ||||||||| | || ||||||||| |||||||  | ||||| |||||||||||||||||||| |||| |||||||| | |   || |    
T  6570520 aaagacactcaatcctaaagttacctcctttgatttctcaagttttcccctctttaagctctccttcaaaatatgcaaagaaacacttaaacaatagttt 6570421  T
Q  109 tctg-cgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaaca 207  Q
    || |  ||||||| |||||||||  ||  || ||||||| |||| |||||||||| || ||||||||| | |||| ||||||| |||| | || | | ||    
T  6570420 tcagttgtcaaaaacgtgtcacg-attggccaaatcgtgacacggttgatgcgtatgacccaaggtacgatcaaccttatcct-aaaaacgtgtcaagca 6570323  T
Q  208 agccaaaaatcgtgtcacgattg 230  Q
     ||||||||||||||||||||||    
T  6570322 tgccaaaaatcgtgtcacgattg 6570300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 226
Target Start/End: Original strand, 32358403 - 32358511
Alignment:
Q  116 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaa 215  Q
    ||||||||||||||  ||||||  |||| || |||| ||| ||||||||||||||||||| | ||||||||||||||||| | |||||| |||||  |||    
T  32358403 caaaatcgtgtcacaattttcca-aatcatgacacgtttggtgcgtacgatccaaggtacgatcaactttatcctgaaaa-cgtgcccagcaagctgaaa 32358500  T
Q  216 atcgtgtcacg 226  Q
    || ||||||||    
T  32358501 attgtgtcacg 32358511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 43504382 - 43504444
Alignment:
Q  2 ctctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttc 64  Q
    ||||||| |||||| |||||||||| |||| || | |||||||||||||||||||||||||||    
T  43504382 ctctaatcaaagactctaaaccctagagtttctccctttgatttcccaagtttctctctcttc 43504444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 195
Target Start/End: Original strand, 47263995 - 47264102
Alignment:
Q  87 aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaacttt 185  Q
    ||||||||||||||||| |||||| || |  ||||||||| ||||||||  || ||||||| || ||||||| ||||||| ||||| ||| |||||| ||    
T  47263995 aagaacacttatatagcagtcttcagctgataaaatcgtgccacgtttt--ccaaatcgtgtcaagattgatacgtacgacccaagatacgaccaacctt 47264092  T
Q  186 atcctgaaaa 195  Q
    ||||||||||    
T  47264093 atcctgaaaa 47264102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 226
Target Start/End: Complemental strand, 4796455 - 4796276
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaaaag-aacacttatatagctgtcttctgcg-tcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||| || |||||||| ||||||||| |  | || ||||||||||||||  |||||  |  ||||||||||||||||||| ||   ||| |    
T  4796455 ccaagtttctctcactccaagctcttcttcaaaatctacacaggaacacttatatagcaatcttcaactatcaaaatcgtgtcacgtttgtcta-aattg 4796357  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    ||  ||  ||| ||||||||||||||||||| ||||||| ||||||||||| | |||||| ||||   ||||||||||||||    
T  4796356 tgatacatttggtgcgtacgatccaaggtacgaccaactctatcctgaaaa-cgtgcccatcaagttgaaaatcgtgtcacg 4796276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 24789784 - 24789706
Alignment:
Q  1 actctaattaaaga-ccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaa 79  Q
    |||||||| ||||| |||||||||||| ||||||| | ||||||||||||||| ||||||| | ||| ||||||||||||    
T  24789784 actctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtctctctct-tccaacctctccttcaaa 24789706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 38671455 - 38671526
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    |||||||| ||||||||| |||||||||||| | || |||||||||||||||||  ||||||| ||| ||||    
T  38671455 actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaagttctc 38671526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 4253776 - 4253830
Alignment:
Q  14 accctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagc 68  Q
    ||||| |||||||||||| | || |||||||||||||||||||||||||| ||||    
T  4253776 accctcaaccctaaagttacctcctttgatttcccaagtttctctctcttaaagc 4253830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 36146659 - 36146725
Alignment:
Q  5 taattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctct 71  Q
    |||| ||||||||| ||| |||||||| | || ||||||||||||||||| |||||||| |||||||    
T  36146659 taatcaaagaccctcaacactaaagttacctcctttgatttcccaagtttttctctcttgaagctct 36146725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 225
Target Start/End: Complemental strand, 2389870 - 2389786
Alignment:
Q  140 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcac 225  Q
    ||||||| |||| ||| || |||||||||||||||| |||||| |||||||||||| | | |||| |||||  |||||||||||||    
T  2389870 aatcgtgacacgtttggtgtgtacgatccaaggtacgaccaaccttatcctgaaaa-cgttcccagcaagctgaaaatcgtgtcac 2389786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 3047529 - 3047622
Alignment:
Q  10 aaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaag-aacacttatatag 102  Q
    |||||| || |||||||||||| | || ||||   ||||||||||||||||||| ||||||| ||||||||| ||||  | |||||||||||||    
T  3047529 aaagacactcaaccctaaagttacctcctttgtaatcccaagtttctctctcttaaagctcttcttcaaaatctgaactgaaacacttatatag 3047622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 43864040 - 43863972
Alignment:
Q  157 tgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    ||||||||| ||||||||| |||||| |||||||||||| ||| || ||||| || ||||||||||||||    
T  43864040 tgcgtacgacccaaggtacgaccaaccttatcctgaaaa-ctttcctaacaaaccgaaaatcgtgtcacg 43863972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 20343840 - 20343776
Alignment:
Q  1 actctaattaaaga-ccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttc 64  Q
    |||||||| ||||| |||||||||||| ||||||| | ||||||| ||||||| |||||||||||    
T  20343840 actctaatcaaagaaccctaaaccctagagttgctccctttgattccccaagtctctctctcttc 20343776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 23565297 - 23565363
Alignment:
Q  4 ctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctct 71  Q
    ||||| ||||||||| |||| ||||||| | || |||||| ||||||||||||||||||| |||||||    
T  23565297 ctaatcaaagacccttaacc-taaagttacctcctttgatatcccaagtttctctctcttgaagctct 23565363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 24526134 - 24526201
Alignment:
Q  5 taattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    |||| ||||||||| ||||||||||||   || ||||||||||| ||||| |||||||| ||||||||    
T  24526134 taatcaaagaccctcaaccctaaagttatctcctttgatttccctagtttttctctcttgaagctctc 24526201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 196
Target Start/End: Original strand, 496341 - 496422
Alignment:
Q  114 gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaat 196  Q
    ||||||||||| ||||||||  ||  ||||||| |||| |||||||||||||  ||||||| | ||||| |||||||||||||    
T  496341 gtcaaaatcgtatcacgtttc-ccaaaatcgtgacacggttgatgcgtacgactcaaggtaaatccaaccttatcctgaaaat 496422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 3050492 - 3050569
Alignment:
Q  116 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaa 194  Q
    ||||||||||||||| ||||||  |||  || |||||||||||||||||| ||||||||| |||||  |||||| ||||    
T  3050492 caaaatcgtgtcacgattttcca-aatgatgtcacgattgatgcgtacgacccaaggtacgaccaatattatccagaaa 3050569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 31105630 - 31105696
Alignment:
Q  5 taattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctct 71  Q
    |||| ||||||||| |||||||||||| | || ||||||||| |||||||  ||||||| |||||||    
T  31105630 taatcaaagaccctcaaccctaaagttacctcctttgatttctcaagttttcctctcttgaagctct 31105696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 496216 - 496269
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagttt 54  Q
    |||||||| ||||||||| |||| ||||||| | || |||||||||||||||||    
T  496216 actctaatcaaagaccctcaaccttaaagttacctcatttgatttcccaagttt 496269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 20284400 - 20284456
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaaaag-aacacttatatag 102  Q
    ||||||||||||||||  || |||||||||||||| || |||| |||||||||||||    
T  20284400 ccaagtttctctctctcaaaactctccttcaaaatttgcaaagaaacacttatatag 20284456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 189; Significance: 1e-102; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 5260556 - 5260788
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||    
T  5260556 actctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagtttctctctcttcaagctcaccttcaaaatctgcaaagaacacttatat 5260655  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||| |||||| |||||||||||||||||    
T  5260656 agctgtcttctgcgtcaaaatcgtgtcatgtttttccccaatcgtgccacaattgatgcgtacgatccaaagtacgaccaaccttatcctgaaaatcttg 5260755  T
Q  201 cccaacaagccaaaaatcgtgtcacgattggac 233  Q
    |||||||||||||||||||||||||||||||||    
T  5260756 cccaacaagccaaaaatcgtgtcacgattggac 5260788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 5258377 - 5258605
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| |||||||||||||||||||||| || | ||||||||| ||||||||||||||||| |||||||||||||||| || ||||||||| |||||    
T  5258377 actctaatcaaagaccctaaaccctaaagtttctccctttgatttctcaagtttctctctcttctagctctccttcaaaatctgcaaagaacacgtatat 5258476  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||| |||||| |||||||||||||||||    
T  5258477 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacaatcgatgcgtacgattcaaggtacgaccaaccttatcctgaaaatcttg 5258576  T
Q  201 cccaacaagccaaaaatcgtgtcacgatt 229  Q
    |||| ||||||||||||||||||||||||    
T  5258577 cccagcaagccaaaaatcgtgtcacgatt 5258605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 9636360 - 9636589
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc-cttcaaaatatgaaaagaacacttata 99  Q
    |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||| | ||| | ||||||||| || ||||||||||||||    
T  9636360 actctaatcaaagaccctaaaccctaaagtttcttcctttgatttcccaagtttctctctcttccaactcactcttcaaaatctgcaaagaacacttata 9636459  T
Q  100 tagctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  9636460 tagctgccttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatctt 9636559  T
Q  200 gcccaacaagccaaaaatcgtgtcacgatt 229  Q
    | ||| ||||||||||||||||||| ||||    
T  9636560 gtccatcaagccaaaaatcgtgtcatgatt 9636589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 45095100 - 45094871
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||| || |||||||||||||||    
T  45095100 actctaatcaaagaccctaaaccctaaagttgcctcttttgatttcccaagtttctctctcttcaagctcatcttcaaaatctgcaaagaacacttatat 45095001  T
Q  101 agctgtcttctgcgt-caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    |||  ||||| |||| | ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||| ||||||||||||||||    
T  45095000 agcaatcttcagcgttcgaaatcgtgtcacgtttttccccaatcgtgtcacgattgatgcgtacgttccaaggtacgaccaaccttatcctgaaaatctt 45094901  T
Q  200 gcccaacaagccaaaaatcgtgtcacgatt 229  Q
    ||||||||||||||||||||||||||||||    
T  45094900 gcccaacaagccaaaaatcgtgtcacgatt 45094871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 7762201 - 7761974
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctct--tcaagctctccttcaaaatatgaaaagaacacttat 98  Q
    |||||||| ||||||||| |||||||||||| | || |||||||||||||||||||||||||  ||||||| ||||||||||| || |||||||||||||    
T  7762201 actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctctcttcaagctttccttcaaaatttgcaaagaacacttat 7762102  T
Q  99 atagctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatct 198  Q
    ||||| |||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||| |||||||||||||||    
T  7762101 atagcagtcttcagcgtctaaatcgtgtcacgtttttccccaatcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatct 7762002  T
Q  199 tgcccaacaagccaaaaatcgtgtcacg 226  Q
    |||||| |||||||||||||||||||||    
T  7762001 tgcccagcaagccaaaaatcgtgtcacg 7761974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 3 - 226
Target Start/End: Complemental strand, 7764401 - 7764162
Alignment:
Q  3 tctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaa----------------gctctccttcaaaatatgaa 86  Q
    |||||| ||||||||| ||| |||||||| | || |||||||||||||||||||||||||||||                ||||||||||||||| || |    
T  7764401 tctaatcaaagaccctcaactctaaagttacctcctttgatttcccaagtttctctctcttcaactctaatgtttacaatgctctccttcaaaatttgca 7764302  T
Q  87 aagaacacttatatagctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaacttta 186  Q
    ||||||||||||||||| |||||| || || |||||||||||||||||||||||||| || |||||||||||||||||| ||||||||| |||||| |||    
T  7764301 aagaacacttatatagcagtcttcagcatctaaatcgtgtcacgtttttccccaatcatgtcacgattgatgcgtacgacccaaggtacgaccaacctta 7764202  T
Q  187 tcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  7764201 tcctaaaaatcttgcccaacaagccaaaaatcgtgtcacg 7764162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 29812994 - 29812774
Alignment:
Q  5 taattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatatagct 104  Q
    |||| ||||||||| |||||||||||| | || ||||||||||||||||||||||||||||| |||| ||||||||| |  ||||||||||||||||||     
T  29812994 taatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaacctcttcttcaaaatctacaaagaacacttatatagca 29812895  T
Q  105 gtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgccc 203  Q
    |||||| || |||||||||||||||||||||| || ||||||| |||| ||| ||||||||| ||||||||| |||||| |||||||||||| |||||||    
T  29812894 gtcttcagcggtcaaaatcgtgtcacgttttt-ccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgccc 29812797  T
Q  204 aacaagccaaaaatcgtgtcacg 226  Q
    | |||| ||||||||||||||||    
T  29812796 agcaagacaaaaatcgtgtcacg 29812774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 40734433 - 40734239
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| ||||||||||||   || |||||||| |||||||||| |||||||||||||||||||||||| || |||||||||||||||    
T  40734433 actctaatcaaagaccctcaaccctaaagttatctcctttgattttccaagtttctgtctcttcaagctctccttcaaaatctgcaaagaacacttatat 40734334  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    ||| |||||| || |||||||| ||||||||||| | || ||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||    
T  40734333 agcagtcttcagctgtcaaaattgtgtcacgtttgt-ccaaatcgtgacacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 40734239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 29810803 - 29810588
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| ||||||||| || | || ||||||||||||||||| ||| ||||||| || | |||||||||||| |||||||||||||||    
T  29810803 actctaatcaaagaccctcaaccctaaaattacctcctttgatttcccaagtttttctttcttcaaccttttcttcaaaatatgcaaagaacacttatat 29810704  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    ||| |||||| || ||||||||||||||||| ||||||| ||||||| |||| ||| ||||||||| ||||||||| |||||| ||||||||||||| ||    
T  29810703 agcagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaat-tt 29810606  T
Q  200 gcccaacaagccaaaaat 217  Q
    | ||| ||||||||||||    
T  29810605 gtccagcaagccaaaaat 29810588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 37408394 - 37408200
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaat-atgaaaagaacacttata 99  Q
    |||||||| ||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||  | | |||||||||||||    
T  37408394 actctaatcaaagaccataaaccctaaagttgcctcctttgatttcccaagtttctctctcttcaagctcaccttcaaaatcttcacaagaacacttata 37408295  T
Q  100 tagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || | |||||| || |  |||||| ||| ||| |||  || |||||||||||||||||| ||||||| ||||||||| |||||| ||||||||||||    
T  37408294 taccagtcttcagcagataaaatcttgttacgattt--ccaaatcgtgccacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaa 37408200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 48438526 - 48438675
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    |||||||||||||| |||||||||||||||||||| || | ||||||||||||||||| |||||| || || ||||||||||||||||| |||  |||||    
T  48438526 ccaagtttctctctattcaagctctccttcaaaatttgcacaagaacacttatatagcagtcttcggctgttaaaatcgtgtcacgtttgtcca-aatcg 48438624  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||| |||||||||||||||||||||||||| ||||||||||||    
T  48438625 tgacacgattggtgcgtacgatccaaggtacaaccaaccttatcctgaaaa 48438675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 40592557 - 40592408
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    |||||||||||||||||||||||||| |||||||| || | ||||||||||||||||| |||||| || |||||||||||||||||||| |||  |||||    
T  40592557 ccaagtttctctctcttcaagctctcattcaaaatctgcacaagaacacttatatagcggtcttcagctgtcaaaatcgtgtcacgtttgtcca-aatcg 40592459  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||| || |||||||||||||||| |||||| ||||||||||||    
T  40592458 tgacacgattggtgtgtacgatccaaggtacgaccaaccttatcctgaaaa 40592408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 30709572 - 30709423
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    |||||||||| |||||||||||||||||||||||| || | ||||||||||||||||| |||||| || |||||||||||||||||||||| || |||||    
T  30709572 ccaagtttctgtctcttcaagctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttt-ccaaatcg 30709474  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||| ||||||||| ||||||||  |||||  ||||||||||||    
T  30709473 tgacacgattggtgcgtacgacccaaggtaagaccaatcttatcctgaaaa 30709423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 47923679 - 47923530
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||||||||||||||||||||||||| || | |||||||||||||||||  ||||| |  |||||||||||||||||||| |||  |||||    
T  47923679 ccaagtttctctctcttcaagctctccttcaaaatctgcacaagaacacttatatagcactcttcagttgtcaaaatcgtgtcacgtttgtcca-aatcg 47923581  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||||||||||| | ||||||||| |||||| ||||||||||||    
T  47923580 tgacacgattgatgcgtacaacccaaggtacgaccaaccttatcctgaaaa 47923530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 51398749 - 51398585
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| |||||| || |||||||||||| | || ||||||||||||||||||| ||||||||| |||||||||||||| |  |||||||||||||||    
T  51398749 actctaatcaaagactctcaaccctaaagttacctcctttgatttcccaagtttctatctcttcaacctctccttcaaaatctacaaagaacacttatat 51398650  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacga 165  Q
    |||  ||||| || ||||||||||||||||  ||||||| ||||||| |||| ||| |||||||||    
T  51398649 agcaatcttcagctgtcaaaatcgtgtcac-attttcccaaatcgtgacacgtttggtgcgtacga 51398585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 5236689 - 5236914
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttata 99  Q
    |||||||| ||||||||| |||||||||||| | || || |||||||||||||||||||||||||||| |  ||||||||| || | ||||||||||| |    
T  5236689 actctaatcaaagaccctcaaccctaaagttacctccttcgatttcccaagtttctctctcttcaagccccacttcaaaatctgcacaagaacacttaaa 5236788  T
Q  100 tagctgtcttct-gcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatct 198  Q
    |||    || |  | ||||||||||||||||||||| ||  ||||||| |||| ||| ||||||||| ||||||||| |||||  |||||||||||| ||    
T  5236789 tagtaccctgcaagtgtcaaaatcgtgtcacgttttgcca-aatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaacttatcctgaaaa-ct 5236886  T
Q  199 tgcccaacaagccaaaaatcgtgtcacg 226  Q
    | |||| |||||| ||||||||||||||    
T  5236887 ttcccagcaagccgaaaatcgtgtcacg 5236914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 39032330 - 39032182
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||||||||||||||| ||||||||  || | |||||||||||||||||  ||||| || ||||||||||||||||| |||||   |||||    
T  39032330 ccaagtttctctctcttcaagctctacttcaaaaactgcacaagaacacttatatagcaatcttcagctgtcaaaatcgtgtcacgattttca--aatcg 39032233  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  39032232 tggcacgattggtgcgtacgacccaaggtacgaccaactttatcctgaaaa 39032182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 196
Target Start/End: Complemental strand, 1736079 - 1735929
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    |||||||||||||||| ||| |||||||||||||| || | ||||||||||||||||| |||||| || |||||||||||||||||||| | || |||||    
T  1736079 ccaagtttctctctctccaaactctccttcaaaatctgcataagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ccaaatcg 1735981  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaat 196  Q
    || |||||||| ||||||| | ||||||||| |||||| ||||||| |||||    
T  1735980 tgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctaaaaat 1735929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 36029404 - 36029553
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||  ||||||||||||||||||||| || | ||||||||||||||||| |||||| || |||||||| ||||||||||||||   || ||    
T  36029404 ccaagtttctcttacttcaagctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaattgtgtcacgtttttcta-aaccg 36029502  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  36029503 tgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 36029553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 233
Target Start/End: Complemental strand, 24694941 - 24694755
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    |||| |||||||||||||||||||| ||||||||| || | ||||||||||||||||| |||||| |  ||||||||||||| |||||| |||  |||||    
T  24694941 ccaaatttctctctcttcaagctcttcttcaaaatctgcacaagaacacttatatagcagtcttcagttgtcaaaatcgtgttacgtttgtcca-aatcg 24694843  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggac 233  Q
    || |||||||| ||||||| | ||||||||| |||||| |||||||||||| | || ||| ||||  ||||||||||  ||||||||||    
T  24694842 tgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctgaaaa-cgtgtccagcaagttaaaaatcgtgatacgattggac 24694755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 3393404 - 3393314
Alignment:
Q  138 ccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgatt 229  Q
    |||||| |||||||||||||| ||||||||| |||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  3393404 ccaatcatgccacgattgatgtgtacgatcctaggtacgaccaactt-atcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgatt 3393314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 8370264 - 8370116
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtcttctg-cgtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||||||||||||||| ||||||||| || | |||||| |||||||||| |||||| |  |||||||||||||||||||||  || |||||    
T  8370264 ccaagtttctctctcttcaagctcttcttcaaaatctgcacaagaacgcttatatagcagtcttcagttgtcaaaatcgtgtcacgtttt--ccaaatcg 8370167  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||| ||||||| | ||||||||| |||||| ||||||| ||||    
T  8370166 tgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctaaaaa 8370116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 16264660 - 16264808
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||  ||||||||||||||||||||  || | ||||||||||||||||| |||||| || ||||||||||||||||| |||  || |||||    
T  16264660 ccaagtttctcttacttcaagctctccttcaaaaactgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgcttt--ccaaatcg 16264757  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||| ||||||| | ||||||||| |||||| ||||||||||||    
T  16264758 tggcacgattggtgcgtaccacccaaggtacgaccaaccttatcctgaaaa 16264808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 27027017 - 27027165
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    |||||||| |||||||||||||||| ||||||||| || | ||||  ||||||||||| |||||| || |||||||||||||||||||||  || || ||    
T  27027017 ccaagtttttctctcttcaagctcttcttcaaaatctgcacaagattacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt--ccaaaacg 27027114  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  27027115 tggcacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 27027165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 47 - 196
Target Start/End: Complemental strand, 27974727 - 27974578
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||||||||||||||||||||||||| || | ||||||||||||||| | |||||| || |  ||||||||| |||  |||  || ||||     
T  27974727 ccaagtttctctctcttcaagctctccttcaaaatctgcacaagaacacttatataacagtcttcagctgataaaatcgtgccacaattt--ccaaatca 27974630  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaat 196  Q
    || |||||||||| ||||||| |||||||||||||||| ||||| |||||||    
T  27974629 tgtcacgattgatacgtacgacccaaggtacaaccaaccttatcatgaaaat 27974578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 226
Target Start/End: Complemental strand, 4569552 - 4569444
Alignment:
Q  116 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaa 215  Q
    ||||||||||||||||||| || ||| |||| |||| ||| ||||||||| ||||||||| |||||| |||||||||||| |||||||| |||||| |||    
T  4569552 caaaatcgtgtcacgtttt-ccacaaccgtgacacggttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgcccagcaagccgaaa 4569455  T
Q  216 atcgtgtcacg 226  Q
    |||||||||||    
T  4569454 atcgtgtcacg 4569444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 31340608 - 31340715
Alignment:
Q  116 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaa 215  Q
    ||||||| ||||||| ||| ||  ||||||| |||| ||| ||||||||| ||||||||| |||||| |||||||||||| ||||||||||||||| |||    
T  31340608 caaaatcatgtcacgatttcccaaaatcgtgtcacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgcccaacaagccgaaa 31340706  T
Q  216 atcgtgtca 224  Q
    |||||||||    
T  31340707 atcgtgtca 31340715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 56 - 226
Target Start/End: Original strand, 44331735 - 44331904
Alignment:
Q  56 tctctcttcaagctctccttcaaaatatgaaaagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgatt 154  Q
    |||||||| ||||||||||||||||| || ||| ||||| |||||||| |||||| || ||||||||| || |||| ||| ||| ||||||| |||  ||    
T  44331735 tctctctttaagctctccttcaaaatctgcaaataacacatatatagcagtcttcagctgtcaaaatcatgccacg-tttccccaaatcgtgacacattt 44331833  T
Q  155 gatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    | || |||||| ||||||||| || ||||||||| |||||| | | ||||  ||||||||||||||||||||    
T  44331834 ggtgtgtacgacccaaggtacgactaactttatcttgaaaa-cgtacccaggaagccaaaaatcgtgtcacg 44331904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 8126941 - 8127090
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaaaagaa-cacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||||||  || |||||||||||||| || ||| || |||||||||||| ||||||  | |||||||||||||||||||| |||  |||||    
T  8126941 ccaagtttctctctctaaaaactctccttcaaaatctgcaaataaacacttatatagcagtcttcaactgtcaaaatcgtgtcacgtttgtcca-aatcg 8127039  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||| ||| || |||||| ||||| ||| |||||| ||||||||||||    
T  8127040 tgacacggttggtgtgtacgacccaagatacgaccaaccttatcctgaaaa 8127090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 34490810 - 34490725
Alignment:
Q  140 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    ||||||| |||| ||| ||||||||| |||||||||||||||| |||||||||||| ||||||||| ||||| ||||||||||||||    
T  34490810 aatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaa-cttgcccaataagccgaaaatcgtgtcacg 34490725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 225
Target Start/End: Complemental strand, 44331471 - 44331281
Alignment:
Q  20 aaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatatagctgtcttctgc-gtcaa 118  Q
    |||||||||||| | || |||||||||||||||||||||||| |||||||||||||| |||| |  |||||||| ||||||||| |||||| || |||||    
T  44331471 aaccctaaagttacctcctttgatttcccaagtttctctctc-tcaagctctccttc-aaatctacaaagaacatttatatagcagtcttcagctgtcaa 44331374  T
Q  119 aatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatc 218  Q
    |||| ||||||||             || || | ||| ||||||||| ||||||||| |||||| |||||||||||| | | |||| |||||||||||||    
T  44331373 aatcatgtcacgt-------------tgacaagtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cgtacccagcaagccaaaaatc 44331288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 226
Target Start/End: Original strand, 43402373 - 43402465
Alignment:
Q  133 tttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    |||||| ||||||| |||| ||| ||||||||| ||||| |||||||||| |||||||||||| |||||||| |||||| ||||||||||||||    
T  43402373 tttcccaaatcgtgacacgtttggtgcgtacgacccaagatacaaccaaccttatcctgaaaa-cttgcccagcaagccgaaaatcgtgtcacg 43402465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 23200370 - 23200449
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaat 81  Q
    |||||||| ||||||||||||||||| ||||||| | ||||||||||||||||||||||||||| | |||| |||||||||    
T  23200370 actctaatcaaagaccctaaaccctagagttgctccctttgatttcccaagtttctctctcttccaactct-cttcaaaat 23200449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 27038362 - 27038501
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatat-gaaaagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    |||||||| |||||||||||||||| ||||||||| |  | ||||||||||||||||| |||||| || |||||||||||||||||||           |    
T  27038362 ccaagtttttctctcttcaagctcttcttcaaaatctacacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtt-----------g 27038450  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  27038451 tggcacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 27038501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 37725986 - 37726134
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    |||||||||||||||||||||||| | | |||||| || | ||||||||||||||||| || | | || |  ||||||||| ||||||||  || |||||    
T  37725986 ccaagtttctctctcttcaagctcacttccaaaatctgcacaagaacacttatatagcagtttgcagctgataaaatcgtgccacgtttt--ccaaatcg 37726083  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||||| ||||||| |||| |||| |||||| ||||||||||||    
T  37726084 tgtcacgattgatacgtacgacccaatgtacgaccaaccttatcctgaaaa 37726134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 226
Target Start/End: Complemental strand, 40912938 - 40912830
Alignment:
Q  116 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaa 215  Q
    ||||||||||||| | ||| ||| ||||||| |||| ||| ||||||||||||||| ||| |||| | |||||| ||||| ||||||||||||||| |||    
T  40912938 caaaatcgtgtcatgattt-cccaaatcgtgacacgtttggtgcgtacgatccaagatacgaccagccttatccagaaaa-cttgcccaacaagccgaaa 40912841  T
Q  216 atcgtgtcacg 226  Q
    |||||||||||    
T  40912840 atcgtgtcacg 40912830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 226
Target Start/End: Original strand, 55302532 - 55302640
Alignment:
Q  116 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaa 215  Q
    |||||| |||||||| ||| ||| ||||||| |||| ||| ||||||||| ||||||||| |||||| |||||||||||| |||||||| |||||| |||    
T  55302532 caaaattgtgtcacgattt-cccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgcccagcaagccgaaa 55302629  T
Q  216 atcgtgtcacg 226  Q
    ||||| |||||    
T  55302630 atcgtatcacg 55302640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 23198171 - 23198267
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacactta 97  Q
    |||||||| ||||||||||||||||| ||||||| | |||||||| |||||||||||||||||| | |||| ||||||||| || | |||||||||||    
T  23198171 actctaatcaaagaccctaaaccctagagttgctccctttgattttccaagtttctctctcttccaactct-cttcaaaatctgcacaagaacactta 23198267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 226
Target Start/End: Original strand, 43404301 - 43404408
Alignment:
Q  117 aaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaa 216  Q
    |||||||||||||| ||| ||| ||||||| |||| ||| ||||||||| ||||||||| ||| || |||||||||||| ||||| || |||||| ||||    
T  43404301 aaaatcgtgtcacgattt-cccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccgaccttatcctgaaaa-cttgctcagcaagccgaaaa 43404398  T
Q  217 tcgtgtcacg 226  Q
    ||||||||||    
T  43404399 tcgtgtcacg 43404408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 32744659 - 32744730
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    |||||||| ||||||||| |||||||||||| | || ||||||||||||||||| |||||||| ||||||||    
T  32744659 actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttttctctcttgaagctctc 32744730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 33386450 - 33386302
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||||||||||||||| || |||||| || | ||||||||||| ||| | |||||| || |  ||||||||| |||  |||  || |||||    
T  33386450 ccaagtttctctctcttcaagctctactccaaaatctgcacaagaacacttaaataccagtcttcagctgataaaatcgtgccacaattt--ccaaatcg 33386353  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||||| ||||||| ||||| ||| |||||| ||||||||||||    
T  33386352 tgtcacgattgatacgtacgacccaagatacgaccaaccttatcctgaaaa 33386302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 226
Target Start/End: Original strand, 6096167 - 6096275
Alignment:
Q  116 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaa 215  Q
    ||||||||||||| | ||| ||| ||||||| |||  ||| ||||||||| ||||||||| |||||| ||||||||||||| ||| |||| ||||| |||    
T  6096167 caaaatcgtgtcatgattt-cccaaatcgtgacacatttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaat-ttgtccaataagccgaaa 6096264  T
Q  216 atcgtgtcacg 226  Q
    |||||||||||    
T  6096265 atcgtgtcacg 6096275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 35925791 - 35925880
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttt 134  Q
    ||||||||||||| ||| |||||| |||||||||  || | ||||||||||||||||| |||||| || |||||||||||||||||||||    
T  35925791 ccaagtttctctcactttaagctcaccttcaaaaactgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt 35925880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 40735314 - 40735254
Alignment:
Q  5 taattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttca 65  Q
    |||| ||||||||| |||||||||||| | || ||||||||||||||||||||||||||||    
T  40735314 taatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttca 40735254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 53921739 - 53921807
Alignment:
Q  4 ctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    ||||| |||||| || |||||||||||| | || ||||||||||||||||| |||||||||||||||||    
T  53921739 ctaatcaaagactctcaaccctaaagttacctcatttgatttcccaagtttttctctcttcaagctctc 53921807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 801032 - 800973
Alignment:
Q  2 ctctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctc 61  Q
    ||||||| |||||| |||||||||| |||| |||| ||||||||||||||||||||||||    
T  801032 ctctaatcaaagactctaaaccctagagtttcttcctttgatttcccaagtttctctctc 800973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 49200041 - 49200126
Alignment:
Q  140 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    ||||||| |||  ||| ||||||||| ||||||||| |||||| |||||||||||| | |||||| |||||| ||||||||||||||    
T  49200041 aatcgtgacacatttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-catgcccagcaagccgaaaatcgtgtcacg 49200126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 7782375 - 7782452
Alignment:
Q  2 ctctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaa 79  Q
    ||||||| |||||| ||||| |||| |||| || | ||||||||||||||||||||||||||| | || |||||||||    
T  7782375 ctctaatcaaagactctaaaacctagagttactccctttgatttcccaagtttctctctcttccaactgtccttcaaa 7782452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 195
Target Start/End: Complemental strand, 40735250 - 40735170
Alignment:
Q  114 gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    |||||||||||||||||||| |||  |||| |  |||||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  40735250 gtcaaaatcgtgtcacgtttgtcca-aatcataacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 40735170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 29196637 - 29196705
Alignment:
Q  4 ctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    ||||| ||||||||| |||||||||||| | || ||||||||||||||||| ||||||||  |||||||    
T  29196637 ctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttttctctcttgtagctctc 29196705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 54635068 - 54635004
Alignment:
Q  1 actctaattaaaga-ccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttc 64  Q
    |||||||| ||||| |||||||||||| ||||||| | ||||||||||||||| |||||||||||    
T  54635068 actctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtctctctctcttc 54635004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 2075303 - 2075369
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagc 68  Q
    |||||||| |||||| || |||||||||||| || | |||||||||||||||||||||||||| ||||    
T  2075303 actctaatcaaagactctcaaccctaaagttact-catttgatttcccaagtttctctctcttgaagc 2075369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 9666704 - 9666771
Alignment:
Q  4 ctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctct 71  Q
    ||||| ||||||||| |||||||||||| | || ||||||||||| ||| |||||||||| |||||||    
T  9666704 ctaatcaaagaccctcaaccctaaagttacctcatttgatttccctagtgtctctctcttgaagctct 9666771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 44700728 - 44700795
Alignment:
Q  4 ctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctct 71  Q
    ||||| ||||||| | |||||||||||| | || ||||||||||| |||||||||||||| |||||||    
T  44700728 ctaatcaaagaccatcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctct 44700795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 39153594 - 39153656
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctctt 63  Q
    |||||||| ||||||||| |||||||||||| | || |||||||||||||||||  |||||||    
T  39153594 actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 39153656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 211
Target Start/End: Complemental strand, 46173318 - 46173241
Alignment:
Q  133 tttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagcc 211  Q
    |||||| | ||||| |||| ||| ||||||||| ||||||||| |||||| |||||||||||| | |||||||||||||    
T  46173318 tttcccaattcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cgtgcccaacaagcc 46173241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 226
Target Start/End: Complemental strand, 54593305 - 54593197
Alignment:
Q  116 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaa 215  Q
    ||||||||||||| | ||| ||| ||||||| |||| ||| ||||||||| |||| |||| |||||| |||||||||||| | |||||| ||||   |||    
T  54593305 caaaatcgtgtcatgattt-cccaaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaa-cgtgcccagcaagttgaaa 54593208  T
Q  216 atcgtgtcacg 226  Q
    |||||||||||    
T  54593207 atcgtgtcacg 54593197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 195
Target Start/End: Original strand, 23410607 - 23410757
Alignment:
Q  45 tcccaagtttctctctcttcaagctctccttcaaaata-tgaaaag-aacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaa 141  Q
    |||||||||||||||||||| ||||||||||||||| | || |||| |||||||||||||| |||||| || ||| |||| |||||||| |||| || ||    
T  23410607 tcccaagtttctctctcttc-agctctccttcaaaaaactgcaaagaaacacttatatagcagtcttcagctgtc-aaattgtgtcacg-ttttgccaaa 23410703  T
Q  142 tcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    ||||| |||| ||| || | || | ||||||||| |||||  ||||| ||||||    
T  23410704 tcgtgacacggttggtgtgaacaacccaaggtacgaccaaacttatcttgaaaa 23410757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 6716443 - 6716379
Alignment:
Q  1 actctaattaaaga-ccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttc 64  Q
    |||||||| ||||| |||||||||||| |||| || | ||||||||||||||| |||||||||||    
T  6716443 actctaatcaaagaaccctaaaccctagagttactccctttgatttcccaagtctctctctcttc 6716379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 6718627 - 6718563
Alignment:
Q  1 actctaattaaaga-ccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttc 64  Q
    |||||||| ||||| |||||||||||| |||| || | ||||||||||||||| |||||||||||    
T  6718627 actctaatcaaagaaccctaaaccctagagttactccctttgatttcccaagtctctctctcttc 6718563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 760782 - 760711
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    |||||||| ||||||||| ||||||||||||   || |||||||||||||||||  ||||||| ||| ||||    
T  760782 actctaatcaaagacccttaaccctaaagttaactcctttgatttcccaagttttcctctcttgaagttctc 760711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 9581218 - 9581147
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    |||||||| ||||||||| ||||||||||||   || |||||||||||||||||  ||||||| ||| ||||    
T  9581218 actctaatcaaagacccttaaccctaaagttaactcctttgatttcccaagttttcctctcttgaagttctc 9581147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 19684122 - 19684193
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    |||||||| ||||||||| ||||||||||||   || |||||||||||||||||  ||||||| ||| ||||    
T  19684122 actctaatcaaagacccttaaccctaaagttaactcctttgatttcccaagttttcctctcttgaagttctc 19684193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 22835235 - 22835306
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    |||||||| ||||||||| |||||||||||| | || |||||||| ||||||||  ||||||| ||| ||||    
T  22835235 actctaatcaaagaccctcaaccctaaagttacctcctttgattttccaagttttcctctcttgaagttctc 22835306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 26386714 - 26386785
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    |||||||| |||||| || |||||||||||| | || |||||||||||||||||  ||||||| ||| ||||    
T  26386714 actctaatcaaagactctcaaccctaaagttacctcctttgatttcccaagttttcctctctttaagttctc 26386785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 27986158 - 27986103
Alignment:
Q  140 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    ||||||| |||||||||| ||||||| ||||| ||| |||||| ||||||||||||    
T  27986158 aatcgtgtcacgattgatacgtacgacccaagatacgaccaaccttatcctgaaaa 27986103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 21711533 - 21711594
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtct 108  Q
    ||||||||||||||||||||||||| ||||||||| || | ||||||||||| ||||| ||||    
T  21711533 ccaagtttctctctcttcaagctct-cttcaaaatctgcacaagaacacttacatagcagtct 21711594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 45282926 - 45282864
Alignment:
Q  1 actctaattaaaga-ccctaaaccctaaagttgcttcttttgatttcccaagtttctctctct 62  Q
    |||||||| ||||| |||||||||||| ||||||| | ||||||| ||||||| |||||||||    
T  45282926 actctaatcaaagaaccctaaaccctagagttgctccctttgattccccaagtctctctctct 45282864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 27986231 - 27986147
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacg 130  Q
    |||||||||||||||||| | ||||| ||| |||| || | ||||||||||| ||| ||||||||||| | |||||||||||||||    
T  27986231 ccaagtttctctctcttccaactctc-ttccaaatctgcacaagaacacttaaatacctgtcttctgcggacaaaatcgtgtcacg 27986147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 6794490 - 6794434
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaaaag-aacacttatatag 102  Q
    ||||||||||||||||  || |||||||||||||| || |||| |||||||||||||    
T  6794490 ccaagtttctctctctaaaacctctccttcaaaatctgcaaagaaacacttatatag 6794434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 189; Significance: 1e-102; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 20762607 - 20762379
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||    
T  20762607 actctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctctttcaaaatctgcaaagaacacttatat 20762508  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||| |||||||||||||||||    
T  20762507 agctgtcttctgcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgttcgatcaaaggtacgaccaaccttatcctgaaaatcttg 20762408  T
Q  201 cccaacaagccaaaaatcgtgtcacgatt 229  Q
    |||||||||||||||||||||||||||||    
T  20762407 cccaacaagccaaaaatcgtgtcacgatt 20762379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 13316551 - 13316779
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||  ||||||||| || |||||||||||||||    
T  13316551 actctaatcaaagaccctaaaccctaaagttgctacctttgatttcccaagtttctctctcttcaagctcatcttcaaaatctgcaaagaacacttatat 13316650  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  13316651 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccactcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttg 13316750  T
Q  201 cccaacaagccaaaaatcgtgtcacgatt 229  Q
    |||| ||||||||||||||||||||||||    
T  13316751 cccagcaagccaaaaatcgtgtcacgatt 13316779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 3206918 - 3206696
Alignment:
Q  5 taattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatatagct 104  Q
    |||| ||||||||| |||||||||||| | || |||||||||||||||||||||||||||| ||||||||||||||| |  ||||||||||||||||||     
T  3206918 taatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcatgctctccttcaaaatcttcaaagaacacttatatagca 3206819  T
Q  105 gtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggt-acaaccaactttatcctgaaaatcttgccc 203  Q
     ||||| ||||| ||||||||||||||||||||| ||| ||| |||||||||||||||||| ||||||| || |||||| ||||||| |||| |||||||    
T  3206818 atcttcagcgtcgaaatcgtgtcacgtttttcccaaattgtgtcacgattgatgcgtacgacccaaggtaacgaccaaccttatcctaaaaaacttgccc 3206719  T
Q  204 aacaagccaaaaatcgtgtcacg 226  Q
    | |||| | ||||||||||||||    
T  3206718 agcaagtcgaaaatcgtgtcacg 3206696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 31659173 - 31658949
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||||||||||| | || |||||||||||||||||||||||||||||||||||  ||||||| || |||||||||||||||    
T  31659173 actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctctctctcaaaatctgcaaagaacacttatat 31659074  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    ||| ||||||  | ||||||||||||||||  |||| || ||||||| |||| ||| ||||||||| |||||||||||||||| |||||||||||| |||    
T  31659073 agcagtcttcaactgtcaaaatcgtgtcac-attttaccaaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaa-ctt 31658976  T
Q  200 gcccaacaagccaaaaatcgtgtcacg 226  Q
     |||| ||||| |||||| ||||||||    
T  31658975 tcccagcaagcaaaaaattgtgtcacg 31658949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 49918284 - 49918060
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||| | |||||||||||| | || |||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||    
T  49918284 actctaatcaaagaccttcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctctacttcaaaatctgcaaagaacacttatat 49918185  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    ||| |||||| || ||||||||||||||||  ||||||| ||||||| |||||||| || |||||| ||||||||  |||||| |||||||||||| | |    
T  49918184 agcagtcttcagctgtcaaaatcgtgtcac-attttcccaaatcgtgacacgattggtgtgtacgacccaaggtatgaccaaccttatcctgaaaa-cgt 49918087  T
Q  200 gcccaacaagccaaaaatcgtgtcacg 226  Q
    ||||| ||||  |||||||||||||||    
T  49918086 gcccagcaagttaaaaatcgtgtcacg 49918060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 30476681 - 30476908
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||| ||||| | ||||||  || | || |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  30476681 actctaatcaaataccctcagccctaacattacatcatttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttatat 30476780  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    ||| |||||| || ||||||||||||||||| ||||||| ||||||| |||| ||| || |||||| ||||||| |||||||| ||||| |||||| |||    
T  30476781 agcagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacgtttggtgtgtacgacccaaggttcaaccaaccttatcttgaaaa-ctt 30476878  T
Q  200 gcccaacaagccaaaaatcgtgtcacgatt 229  Q
    ||||| ||| || |||||||||||||||||    
T  30476879 gcccagcaaaccgaaaatcgtgtcacgatt 30476908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 5 - 225
Target Start/End: Complemental strand, 10925154 - 10924935
Alignment:
Q  5 taattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatatagct 104  Q
    |||| ||||||||| |||||||||||| | || |||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||| |     
T  10925154 taatcaaagaccctcaaccctaaagttacctcctttgattttccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttatataaca 10925055  T
Q  105 gtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgccc 203  Q
    |||||| || ||||||||||||||||| |||| || ||||||| |||| |||||||||| || ||||||||  |||||||||||  |||||| ||||||     
T  10925054 gtcttcagctgtcaaaatcgtgtcacg-ttttgccaaatcgtgacacggttgatgcgtatgacccaaggtatgaccaactttattttgaaaa-cttgcct 10924957  T
Q  204 aacaagccaaaaatcgtgtcac 225  Q
    | |||||| |||||||||||||    
T  10924956 accaagccgaaaatcgtgtcac 10924935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 28220459 - 28220646
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||||||||||| | || ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||    
T  28220459 actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctcaccttcaaaatctgcaaagaacacttatat 28220558  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatc 188  Q
    ||| |||||| || ||||||||||||||||| ||||||| ||||||| |||| ||  ||||||||| ||||||||| |||||| |||||    
T  28220559 agcagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacgttttgtgcgtacgacccaaggtacgaccaaccttatc 28220646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 28223654 - 28223841
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||||||||||| | || ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||    
T  28223654 actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctcaccttcaaaatctgcaaagaacacttatat 28223753  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatc 188  Q
    ||| |||||| || ||||||||||||||||| ||||||| ||| ||| |||| ||  ||||||||| ||||||||| |||||| |||||    
T  28223754 agcagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaattgtgacacgttttgtgcgtacgacccaaggtacgaccaaccttatc 28223841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 1833457 - 1833236
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||| |||||||   || ||||||||||||||||||||||||||||| ||||| |||||||| || |||||| ||||||||    
T  1833457 actctaatcaaagaccctcaaccttaaagttatctcctttgatttcccaagtttctctctcttcaatctctcattcaaaatctgcaaagaatacttatat 1833358  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    ||  |||||| || ||||||||||||||||| ||||| | ||||||| |||| ||| ||||||| | ||||||||  |||||| ||||| ||||||   |    
T  1833357 aggagtcttcagctgtcaaaatcgtgtcacg-ttttcgcaaatcgtgacacgtttggtgcgtacaacccaaggtatgaccaaccttatcttgaaaaatgt 1833259  T
Q  200 gcccaacaagccaaaaatcgtgt 222  Q
     | || |||||||||||||||||    
T  1833258 actcagcaagccaaaaatcgtgt 1833236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 3156801 - 3156582
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||||||||||| | || ||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||    
T  3156801 actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttccagctctccttcaaaatctgcaaagaacacttatat 3156702  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    | | |||||| || |||||||| |||| ||| |||| || ||  ||| |||| ||| || ||| || ||||||||| |||||| |||||||||||| | |    
T  3156701 aacagtcttcagctgtcaaaattgtgttacg-ttttgccaaacggtgacacgtttggtgtgtatga-ccaaggtacgaccaaccttatcctgaaaa-cgt 3156605  T
Q  200 gcccaacaagccaaaaatcgtgt 222  Q
    | ||| ||| |||||||||||||    
T  3156604 gtccagcaaaccaaaaatcgtgt 3156582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 44455095 - 44454870
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttata 99  Q
    |||||||| ||||||||| |||||||||||| | || |||||||| |||||||||||||||| ||| |||||||||||||| || | ||||||||||| |    
T  44455095 actctaatcaaagaccctcaaccctaaagttacctcctttgatttaccaagtttctctctctacaacctctccttcaaaatctgcacaagaacacttaaa 44454996  T
Q  100 tagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatct 198  Q
    |||    || |  | |||||||||||| |||| |||| || ||||||| |||| ||  ||||||||| |||||||||||||||| ||||| |||||| ||    
T  44454995 tagtaccctgcaactgtcaaaatcgtgccacg-ttttgccaaatcgtgacacgtttagtgcgtacgacccaaggtacaaccaaccttatcttgaaaa-ct 44454898  T
Q  199 tgcccaacaagccaaaaatcgtgtcacg 226  Q
    |||||| |||||| ||||||||||||||    
T  44454897 tgcccagcaagccgaaaatcgtgtcacg 44454870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 37503787 - 37503921
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||||||||||  | || ||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||    
T  37503787 actctaatcaaagaccctcaaccctaaagtcacctcctttgatttcccaagtttctctctcttcaacctctccttcaaaatctgcaaagaacacttatat 37503886  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttt 134  Q
    | | |||||| || || ||||||||||||||||||    
T  37503887 atcagtcttcagctgtaaaaatcgtgtcacgtttt 37503921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 3282018 - 3282166
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||| ||||||||||||||||||||| || | ||||||||||||||||| |||||| || ||||||||||||||||||||||  | |||||    
T  3282018 ccaagtttctctcacttcaagctctccttcaaaatctgcataagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttt--caaatcg 3282115  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||| ||||||||| ||||||||  |||||| ||||| ||||||    
T  3282116 tggcacgattggtgcgtacgacccaaggtatgaccaaccttatcttgaaaa 3282166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 21536356 - 21536208
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||| ||||||||||||||||||||| || | ||||||||||||||||| |||||| || |||||||||||||||||||||  || |||||    
T  21536356 ccaagtttctctcacttcaagctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt--ccaaatcg 21536259  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
     | |||||||| ||||||||| ||||||||| |||||| | ||||||||||    
T  21536258 gggcacgattggtgcgtacgacccaaggtacgaccaacctcatcctgaaaa 21536208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 13598711 - 13598860
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    |||| |||||||||||||||||||||||||||||| || | ||||||| ||||||||| |||||| || |||||||||||||||||||| |||  ||| |    
T  13598711 ccaattttctctctcttcaagctctccttcaaaatctgcacaagaacatttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtcca-aattg 13598809  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  13598810 tgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 13598860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 3189262 - 3189137
Alignment:
Q  5 taattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatatagct 104  Q
    |||| ||||||||| |||||||||||| | || |||||||||||||||||||||||||||| ||||||||||||||| |  ||||||||||||||||||     
T  3189262 taatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcatgctctccttcaaaatcttcaaagaacacttatatagca 3189163  T
Q  105 gtcttctgcgtcaaaatcgtgtcacg 130  Q
     ||||| ||||| |||| ||||||||    
T  3189162 atcttcagcgtccaaattgtgtcacg 3189137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 3198079 - 3197954
Alignment:
Q  5 taattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatatagct 104  Q
    |||| ||||||||| |||||||||||| | || |||||||||||||||||||||||||||| ||||||||||||||| |  ||||||||||||||||||     
T  3198079 taatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcatgctctccttcaaaatcttcaaagaacacttatatagca 3197980  T
Q  105 gtcttctgcgtcaaaatcgtgtcacg 130  Q
     ||||| ||||| |||| ||||||||    
T  3197979 atcttcagcgtccaaattgtgtcacg 3197954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 208
Target Start/End: Original strand, 29652124 - 29652286
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    |||||||||||||| |||||||||||||||||||| || | || |||||||||||||| |||||| || ||||||||| |||||||||| |||  |||||    
T  29652124 ccaagtttctctcttttcaagctctccttcaaaatctgcacaaaaacacttatatagcagtcttcagctgtcaaaatcatgtcacgtttgtcca-aatcg 29652222  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaa 208  Q
    || |||||||| || |||||| ||||||||| |||||| |||||||||||| | | ||||||||    
T  29652223 tgacacgattggtgtgtacgacccaaggtacgaccaaccttatcctgaaaaacgtacccaacaa 29652286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 13604408 - 13604260
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||||||| |||||||||| |||||| || | ||||||||||||||||| |||||| || |  ||||||||| ||||||||  || |||||    
T  13604408 ccaagtttctctctctttaagctctcctccaaaatttgcacaagaacacttatatagcagtcttcagctgataaaatcgtgccacgtttt--ccaaatcg 13604311  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||||| ||||||| ||||||||| |||||| ||||||||||||    
T  13604310 tgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaa 13604260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 37070078 - 37070227
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    |||||||||||||||||| |||||| ||||||||| || | ||||||||||||||||| |||||  || ||||||||  ||||||| ||||||  |||||    
T  37070078 ccaagtttctctctcttccagctctacttcaaaatctgcacaagaacacttatatagcagtctttagctgtcaaaattatgtcacgattttcca-aatcg 37070176  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  37070177 tggcacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 37070227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 37560102 - 37560213
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||| ||||||| | || ||||||||| |||||||||||||||||||||| | ||||||||| || ||||||||||||||     
T  37560102 actctaatcaaagaccctcaaccttaaagttacctcatttgatttctcaagtttctctctcttcaagctttacttcaaaatctgcaaagaacacttatac 37560201  T
Q  101 agctgtcttctg 112  Q
    ||  ||||||||    
T  37560202 aggagtcttctg 37560213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 46064849 - 46064629
Alignment:
Q  5 taattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaag-aacacttatatagc 103  Q
    |||| ||||||||| |||  ||||||| | |  ||||||||||||||||| |||||||| ||||||||||| ||||| ||||  | |||||||| ||| |    
T  46064849 taatcaaagaccctcaacaataaagttaccttctttgatttcccaagtttttctctcttgaagctctccttaaaaat-tgaattggaacacttaaataac 46064751  T
Q  104 tgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcc 202  Q
     |||||| || |||||||||||| || | ||  ||  ||||||| |||| ||||| ||||||| ||||||||| ||||||||||||||||||||  ||||    
T  46064750 agtcttcagctgtcaaaatcgtgacatgattggcca-aatcgtgtcacggttgatacgtacgacccaaggtacgaccaactttatcctgaaaat-gtgcc 46064653  T
Q  203 caacaagccaaaaatcgtgtcacg 226  Q
     | || ||||||||||||||||||    
T  46064652 aagcatgccaaaaatcgtgtcacg 46064629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 11348297 - 11348212
Alignment:
Q  140 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    ||||||| |||| ||| |||||||||||||| |||| |||||| |||||||||||| ||||||||||||||| ||||||||||||||    
T  11348297 aatcgtgacacgtttggtgcgtacgatccaatgtacgaccaaccttatcctgaaaa-cttgcccaacaagccgaaaatcgtgtcacg 11348212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 26644684 - 26644565
Alignment:
Q  47 ccaagtttctctctcttcaagctctcc-ttcaaaatatg-aaaagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatc 143  Q
    ||||||||||||||||||| ||||||| |||||||| || | ||||||||||||||||| |||||| || |  ||||||||| ||||||||  || ||||    
T  26644684 ccaagtttctctctcttcaggctctcctttcaaaatctgcataagaacacttatatagcagtcttcagctgataaaatcgtgccacgtttt--ccaaatc 26644587  T
Q  144 gtgccacgattgatgcgtacga 165  Q
    |||||||||||| |||||||||    
T  26644586 gtgccacgattggtgcgtacga 26644565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 37033636 - 37033742
Alignment:
Q  116 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaa 215  Q
    |||||| |||||||| ||| ||| ||||||| |||| ||| ||||||||| |||||||||||||||| |||||||||||| |||||||  |||| | |||    
T  37033636 caaaattgtgtcacgattt-cccaaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaa-cttgccctgcaaggcgaaa 37033733  T
Q  216 atcgtgtca 224  Q
    |||||||||    
T  37033734 atcgtgtca 37033742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 15820242 - 15820175
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagc 68  Q
    |||||||| ||||||||| |||||||||||| | |||||||||||||||||||| |||||||| ||||    
T  15820242 actctaatcaaagaccctcaaccctaaagttacctcttttgatttcccaagtttttctctcttgaagc 15820175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 13138210 - 13138286
Alignment:
Q  4 ctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaa 80  Q
    ||||| ||||||||| |||||||||||| | || ||||||||||||||||| |||||||| ||||||| | ||||||    
T  13138210 ctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttttctctcttgaagctcttcctcaaaa 13138286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 40282320 - 40282256
Alignment:
Q  1 actctaattaaaga-ccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttc 64  Q
    |||||||| ||||| |||||||||||| ||||||| | |||||||||||||||||||||||||||    
T  40282320 actctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtttctctctcttc 40282256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 51765329 - 51765234
Alignment:
Q  2 ctctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacactta 97  Q
    ||||||| ||||||||||||||||| |||| || | |||||||||||||||||||| |||||| | ||| |||||||||| || | |||||||||||    
T  51765329 ctctaatcaaagaccctaaaccctagagttactccctttgatttcccaagtttctcactcttccaactc-ccttcaaaatctgcacaagaacactta 51765234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 226
Target Start/End: Complemental strand, 3189140 - 3189061
Alignment:
Q  148 cacgattgatgcgtacgatccaaggta-caaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    |||||||||||||||||| |||||||| | |||||| ||||||| |||| |||||||| |||| | ||||||||||||||    
T  3189140 cacgattgatgcgtacgacccaaggtaacgaccaaccttatcctaaaaaacttgcccagcaagtcgaaaatcgtgtcacg 3189061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 226
Target Start/End: Complemental strand, 3197957 - 3197878
Alignment:
Q  148 cacgattgatgcgtacgatccaaggta-caaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    |||||||||||||||||| |||||||| | |||||| ||||||| |||| |||||||| |||| | ||||||||||||||    
T  3197957 cacgattgatgcgtacgacccaaggtaacgaccaaccttatcctaaaaaacttgcccagcaagtcgaaaatcgtgtcacg 3197878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 28265802 - 28265869
Alignment:
Q  4 ctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctct 71  Q
    ||||| ||||||||| |||||||||||| | || ||||||||||| |||||||||||||| |||||||    
T  28265802 ctaatcaaagaccctcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctct 28265869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 50167424 - 50167491
Alignment:
Q  4 ctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctct 71  Q
    ||||| ||||||||| |||||||||||| | || ||||||||||| |||||||||||||| |||||||    
T  50167424 ctaatcaaagaccctcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctct 50167491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 195
Target Start/End: Original strand, 4552875 - 4553075
Alignment:
Q  6 aattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc----------cttcaaaatatgaaaagaa-cac 94  Q
    ||||||||||||| |||||||||||| | || ||| ||||||||||||   ||||||| ||||||||          ||||||||| || |||||| |||    
T  4552875 aattaaagaccctcaaccctaaagttacctcctttaatttcccaagttctcctctcttgaagctctcttgaaccacccttcaaaatctgcaaagaaacac 4552974  T
Q  95 ttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaa 193  Q
    ||||||| | |||||| || ||||||| ||||||||||||| ||  ||||||| |||| |||||||||||||  || | ||| || ||| ||||||||||    
T  4552975 ttatataacagtcttcagctgtcaaaaacgtgtcacgttttgcca-aatcgtgacacggttgatgcgtacgactcacgatacgactaaccttatcctgaa 4553073  T
Q  194 aa 195  Q
    ||    
T  4553074 aa 4553075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 9022693 - 9022653
Alignment:
Q  46 cccaagtttctctctcttcaagctctccttcaaaatatgaa 86  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  9022693 cccaagtttctctctcttcaagctctccttcaaaatctgaa 9022653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 21053901 - 21053837
Alignment:
Q  1 actctaattaaaga-ccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttc 64  Q
    |||||||| ||||| |||||||||||| ||||||| | ||||||||||||||| |||||||||||    
T  21053901 actctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtctctctctcttc 21053837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 777162 - 777095
Alignment:
Q  4 ctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctct 71  Q
    ||||| ||||||| | |||||||||||| | || ||||||||||| |||||||||||||| |||||||    
T  777162 ctaatcaaagaccatcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctct 777095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 9987145 - 9987066
Alignment:
Q  1 actctaattaaaga-ccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaa 79  Q
    |||||||| ||||| |||||||||||| ||||||| | ||||||||||||||| | ||||||||| | ||| ||||||||    
T  9987145 actctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtctatctctcttccaactcaccttcaaa 9987066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 50169446 - 50169513
Alignment:
Q  4 ctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctct 71  Q
    ||||| ||| ||||| |||||||||||| | || ||||||||||| |||||||||||||| |||||||    
T  50169446 ctaataaaaaaccctcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctct 50169513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 16455442 - 16455353
Alignment:
Q  140 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattg 230  Q
    ||||||| |||| ||||||||||||| ||||||||| | |||  |||||||||||| | |||| ||||  ||||||||| |||||||||||    
T  16455442 aatcgtgtcacggttgatgcgtacgacccaaggtacgagcaaacttatcctgaaaa-cgtgccaaacataccaaaaatcatgtcacgattg 16455353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 23555502 - 23555583
Alignment:
Q  5 taattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaa 86  Q
    |||| ||||| ||| |||||| ||||| | || ||||||||||||||||| |||||||| ||||||||  |||||| |||||    
T  23555502 taatcaaagatcctcaaccctgaagttacctcctttgatttcccaagtttttctctcttgaagctctctctcaaaaaatgaa 23555583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 225
Target Start/End: Complemental strand, 29135846 - 29135762
Alignment:
Q  140 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcac 225  Q
    ||||||| |||| ||| ||||||||| ||||||||| |||||| |||||||||||| | |||||| |||||  |||||| ||||||    
T  29135846 aatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cgtgcccagcaagctgaaaatcatgtcac 29135762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 20622463 - 20622523
Alignment:
Q  1 actctaattaaaga-ccctaaaccctaaagttgcttcttttgatttcccaagtttctctct 60  Q
    |||||||| ||||| |||||||||||| ||||||| | ||||||||||||||| |||||||    
T  20622463 actctaatcaaagaaccctaaaccctagagttgctccatttgatttcccaagtctctctct 20622523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 197141 - 197212
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    |||||||| ||||||||| |||||||||||| | || |||||||| ||||||||  ||||||| ||| ||||    
T  197141 actctaatcaaagaccctcaaccctaaagttacctcctttgattttccaagttttcctctcttgaagttctc 197212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 3847354 - 3847425
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    |||||||| |||||||||  ||||||||||| | || |||||||||||||||||  ||||||| ||| ||||    
T  3847354 actctaatcaaagaccctcgaccctaaagttacctcctttgatttcccaagttttcctctcttgaagttctc 3847425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 8551020 - 8551091
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    |||||||| ||||||||| ||||||||||||   || |||||||||||||||||  ||||||| ||| ||||    
T  8551020 actctaatcaaagacccttaaccctaaagttaactcctttgatttcccaagttttcctctcttgaagttctc 8551091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 40122431 - 40122502
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    ||||||||||| || ||| |||| ||||||| | || ||||||||||||||||| |||||||| || |||||    
T  40122431 actctaattaatgatcctcaaccataaagttacctcctttgatttcccaagtttttctctcttgaacctctc 40122502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 45644591 - 45644658
Alignment:
Q  4 ctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctct 71  Q
    ||||| ||||||||| ||||||||||||   || ||||||||||| ||||| |||||||| |||||||    
T  45644591 ctaatcaaagaccctcaaccctaaagttatctcctttgatttccctagtttttctctcttgaagctct 45644658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 834404 - 834453
Alignment:
Q  5 taattaaagaccctaaaccctaaagttgcttcttttgatttcccaagttt 54  Q
    |||| ||||||||| |||||||||||| | || |||||||||||||||||    
T  834404 taatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 834453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 15820090 - 15820038
Alignment:
Q  153 ttgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaa 205  Q
    ||||||||||||| ||||||||| |||||| ||||||| ||||| || |||||    
T  15820090 ttgatgcgtacgacccaaggtacgaccaaccttatcctaaaaatgtttcccaa 15820038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 32889749 - 32889805
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaaaag-aacacttatatag 102  Q
    ||||||||||||||||  || |||| |||||||||||| |||| |||||||||||||    
T  32889749 ccaagtttctctctctaaaatctctacttcaaaatatgcaaagaaacacttatatag 32889805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 47098611 - 47098555
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaaaag-aacacttatatag 102  Q
    ||||||||||||||||  |||||||| |||||||| || |||| |||||||||||||    
T  47098611 ccaagtttctctctctaaaagctctcattcaaaatctgcaaagaaacacttatatag 47098555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 47102625 - 47102569
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaaaag-aacacttatatag 102  Q
    ||||||||||||||||  |||||||| |||||||| || |||| |||||||||||||    
T  47102625 ccaagtttctctctctaaaagctctcattcaaaatctgcaaagaaacacttatatag 47102569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 185; Significance: 1e-100; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 4503365 - 4503597
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||    
T  4503365 actctaatcaaagaacctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttctagctctccttcaaaatctgcaaagaacacttatat 4503464  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    || |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  4503465 agttgtcttctacgtcaaaatcgtgtcacgtttttccccaatcgtgccacaattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttg 4503564  T
Q  201 cccaacaagccaaaaatcgtgtcacgattggac 233  Q
    |||| ||||||||||||||||||||||||||||    
T  4503565 cccagcaagccaaaaatcgtgtcacgattggac 4503597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 45099690 - 45099466
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |  |||||||||||||||    
T  45099690 actctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctcaccttcaaaatctacaaagaacacttatat 45099591  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||    
T  45099590 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgattcaaggtacgaccaaccttatcctgaaaatcttg 45099491  T
Q  201 cccaacaagccaaaaatcgtgtcac 225  Q
    |||| ||||||||||||||||||||    
T  45099490 cccagcaagccaaaaatcgtgtcac 45099466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 36205896 - 36206126
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttata- 99  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||     
T  36205896 actctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctcaccttcaaaatctgcaaagaacacttatat 36205995  T
Q  100 -tagctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatct 198  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||| |||||||||||||||    
T  36205996 atagctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacaattgatgcgtacaatccaaggtacgaccaaccttatcctgaaaatct 36206095  T
Q  199 tgcccaacaagccaaaaatcgtgtcacgatt 229  Q
    | |||| ||||||||||||||||||||||||    
T  36206096 ttcccagcaagccaaaaatcgtgtcacgatt 36206126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 5723487 - 5723719
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| |||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||| || |||||||| ||||||    
T  5723487 actctaatcaaagaccccaaaccctaaagttgcctcctttgatttcccaagtttctctctcttcaagctcttcttcaaaatctgcaaagaacatttatat 5723586  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    |||  ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  5723587 agcaatcttcagcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttg 5723686  T
Q  201 cccaacaagccaaaaatcgtgtcacgattggac 233  Q
     ||| ||||||||||||||||||||||||||||    
T  5723687 tccagcaagccaaaaatcgtgtcacgattggac 5723719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 2334650 - 2334882
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||| ||||| |||||||||||| | || ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||    
T  2334650 actctaatcaaataccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctcaccttcaaaatctgcaaagaacacttatat 2334749  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    ||| |||||| ||||| ||||||||||||||||||||| ||||||| ||||||||||| |||||| ||||||||| |||||| |||||||||||||||||    
T  2334750 agcagtcttcagcgtcgaaatcgtgtcacgtttttcccaaatcgtgtcacgattgatgtgtacgacccaaggtacgaccaaccttatcctgaaaatcttg 2334849  T
Q  201 cccaacaagccaaaaatcgtgtcacgattggac 233  Q
    |||| ||||||||||||||||||||||||||||    
T  2334850 cccagcaagccaaaaatcgtgtcacgattggac 2334882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 36988308 - 36988533
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  36988308 actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctctccttcaaaatatgcaaagaacacttatat 36988407  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    ||| |||||| |||||||||||||||||| |||| |  |||||||| ||| |||||||||||||| ||||||||| |||||| |||||||||||| ||||    
T  36988408 agcagtcttcagcgtcaaaatcgtgtcacattttccatcaatcgtgtcacaattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaaacttg 36988507  T
Q  201 cccaacaagccaaaaatcgtgtcacg 226  Q
    |||| |||| | ||||||||||||||    
T  36988508 cccagcaagtcgaaaatcgtgtcacg 36988533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 6595239 - 6595452
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||||||||||| | || |||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  6595239 actctaatcaaagaccctcaaccctaaagttacctcatttgatttcctaagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttatat 6595338  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    ||| ||||||  |||||||||||||||||||||| |  |||||||| || ||||||||||||||            || ||| ||||||||||||||| |    
T  6595339 agcagtcttcaacgtcaaaatcgtgtcacgttttccatcaatcgtgtcaagattgatgcgtacg------------actaaccttatcctgaaaatctag 6595426  T
Q  201 cccaacaagccaaaaatcgtgtcacg 226  Q
    |||| |||||||||||||||||||||    
T  6595427 cccagcaagccaaaaatcgtgtcacg 6595452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 36318242 - 36318466
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||  | |||||||||||| | || ||||||||||||||||||||||||||  | |||||||||||||| || |||||||||||||||    
T  36318242 actctaatcaaagacattcaaccctaaagttacctcctttgatttcccaagtttctctctcttttacctctccttcaaaatctgcaaagaacacttatat 36318341  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    ||| |||||| || ||||||||||||||||| ||||  | ||| ||| |||| ||| |||||||||| |||||||| |||||| |||||||||||| | |    
T  36318342 agcagtcttcagctgtcaaaatcgtgtcacg-ttttgtcaaattgtgacacggttggtgcgtacgattcaaggtacgaccaaccttatcctgaaaa-cgt 36318439  T
Q  200 gcccaacaagccaaaaatcgtgtcacg 226  Q
    | ||| |||||| ||||||||||||||    
T  36318440 ggccagcaagccgaaaatcgtgtcacg 36318466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 8 - 226
Target Start/End: Original strand, 2837084 - 2837301
Alignment:
Q  8 ttaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatatagctgtc 107  Q
    ||||||| ||| |||| |||| || | || ||||||||||||||||||||||||||||| |||||||||||||| |  |||||||||||||||||| |||    
T  2837084 ttaaagatcctcaaccttaaaattacctcctttgatttcccaagtttctctctcttcaaactctccttcaaaatttacaaagaacacttatatagcagtc 2837183  T
Q  108 ttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaac 206  Q
    ||| || ||||||||||||| ||| ||||||| |||| || |||| ||| ||||||||| ||||||||| |||||| |||||||||||| ||| |||| |    
T  2837184 ttcagctgtcaaaatcgtgttacg-ttttcccaaatcatgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttacccagc 2837281  T
Q  207 aagccaaaaatcgtgtcacg 226  Q
    |||   ||||||||||||||    
T  2837282 aaggtgaaaatcgtgtcacg 2837301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 39284820 - 39284656
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||||||||||| | || ||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||    
T  39284820 actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaacctctccttcaaaatctgcaaagaacacttatat 39284721  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacga 165  Q
    ||| |||||| || ||||||||| ||||||| ||||||| ||||||| |||  ||| |||||||||    
T  39284720 agcagtcttcagctgtcaaaatcatgtcacg-ttttcccaaatcgtgacacatttggtgcgtacga 39284656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 38312175 - 38312045
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||| ||| |||||||||||| | || ||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||    
T  38312175 actctaatcaaagaacctcaaccctaaagttacctcctttgatttcccaaatttctctctcttcaagctctccttcaaaatctgcaaagaacacttatat 38312076  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacg 130  Q
    ||| |||||| || |||||||||||||||||    
T  38312075 agcagtcttcagctgtcaaaatcgtgtcacg 38312045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 34389162 - 34389310
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||| | ||||||||||||||||||| || | ||||||||||||||||| |||||| || |||||||||||||||||||||  || |||||    
T  34389162 ccaagtttctctcacatcaagctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt--ccaaatcg 34389259  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  34389260 tgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 34389310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 23078257 - 23078109
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||| ||||||||||||||||||||| || | ||||||||||||||||| ||||||  | |||||||| ||||||||||||  || |||||    
T  23078257 ccaagtttctctcacttcaagctctccttcaaaatctgcacaagaacacttatatagcagtcttcaactgtcaaaattgtgtcacgtttt--ccaaatcg 23078160  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||| ||||||||| ||||| ||| |||||| ||||||||||||    
T  23078159 tggcacgattggtgcgtacgacccaagatacgaccaaccttatcctgaaaa 23078109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 28258963 - 28258815
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||||||||||||||| ||||||||| |  | ||||||||||||||||| |||||| |  |  ||||||||| ||||||||  || |||||    
T  28258963 ccaagtttctctctcttcaagctcttcttcaaaatctacacaagaacacttatatagcagtcttcagttgataaaatcgtgccacgtttt--ccaaatcg 28258866  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||||||    
T  28258865 tgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaa 28258815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 29867804 - 29867641
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| ||||| | |||| | |  ||||||| || ||||||||||||||| |||||||| |||||||  || |||||||||||||||    
T  29867804 actctaatcaaagaccctcaacccaatagttaccttctttgattcccaaagtttctctctctttaagctctctttcaaaaactgcaaagaacacttatat 29867705  T
Q  101 agctgtcttc-tgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtac 163  Q
    ||| |||||| |  ||||||||||||||||||||||||| ||||||| |||| ||| |||||||    
T  29867704 agcagtcttcatctgtcaaaatcgtgtcacgtttttcccaaatcgtgacacgtttggtgcgtac 29867641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 33528410 - 33528261
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtcttctg-cgtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||||||||||||||||||||||||| || | ||||||||||||||||| |||||| |  || ||||||||||||||||| | || |||||    
T  33528410 ccaagtttctctctcttcaagctctccttcaaaatctgcacaagaacacttatatagcagtcttcagttgttaaaatcgtgtcacgtttgt-ccaaatcg 33528312  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||| ||||||||| ||||||||| | |||| |||| |||||||    
T  33528311 tgacacgattggtgcgtacgacccaaggtacgatcaaccttattctgaaaa 33528261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 47 - 224
Target Start/End: Original strand, 21630256 - 21630433
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatat-gaaaagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||| ||||||||||||||||||||| |  | ||||||||||||||||| |||||  || |||||||||||||||||||| | || |||||    
T  21630256 ccaagtttctctcccttcaagctctccttcaaaatctacacaagaacacttatatagcagtctttagctgtcaaaatcgtgtcacgtttgt-ccaaatcg 21630354  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtca 224  Q
    || |||||||| || |||||| |||| |||| |||||| |||||||||||| | |||||| ||||   ||||||||||||    
T  21630355 tgacacgattggtgtgtacgacccaaagtacgaccaaccttatcctgaaaa-cgtgcccagcaagttgaaaatcgtgtca 21630433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 49 - 195
Target Start/End: Complemental strand, 10707036 - 10706890
Alignment:
Q  49 aagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtg 146  Q
    |||||||||||||||| |||||| ||||||||| || | ||||||||||||||||| |||||| || |||||||||||||||||||||  || || ||||    
T  10707036 aagtttctctctcttccagctcttcttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt--ccaaaccgtg 10706939  T
Q  147 ccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
     |||||||| || |||||| ||||||||| |||||| ||||||| ||||    
T  10706938 gcacgattggtgtgtacgacccaaggtacgaccaaccttatccttaaaa 10706890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 226
Target Start/End: Original strand, 20522535 - 20522712
Alignment:
Q  49 aagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtg 146  Q
    |||||||||||||| ||||||| |||||||||| || | |||||||||| |||||| || ||  || |||||||||||||||||||| |||  ||| |||    
T  20522535 aagtttctctctctccaagctcaccttcaaaatctgcagaagaacacttttatagcagtttttagctgtcaaaatcgtgtcacgtttgtcca-aattgtg 20522633  T
Q  147 ccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
     |||||||| ||||||||| ||||||||| |||||| |||||||||||| | |||||| ||||   ||||||||||||||    
T  20522634 acacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cgtgcccagcaagttgaaaatcgtgtcacg 20522712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 17057602 - 17057732
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||| | |||||||||||| | ||  ||||||||| || ||||||||||||||| |||||||||||||| || |||||||||||||||    
T  17057602 actctaatcaaagaccttcaaccctaaagttacctccgttgatttccaaattttctctctcttcaaactctccttcaaaatctgcaaagaacacttatat 17057701  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacg 130  Q
    ||| |||||| || |||||||  ||||||||    
T  17057702 agcagtcttcagctgtcaaaaatgtgtcacg 17057732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 17085585 - 17085715
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||| | |||||||||||| | ||  ||||||||| || ||||||||||||||| |||||||||||||| || |||||||||||||||    
T  17085585 actctaatcaaagaccttcaaccctaaagttacctccgttgatttccaaattttctctctcttcaaactctccttcaaaatctgcaaagaacacttatat 17085684  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacg 130  Q
    ||| |||||| || |||||||  ||||||||    
T  17085685 agcagtcttcagctgtcaaaaatgtgtcacg 17085715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 226
Target Start/End: Complemental strand, 14698795 - 14698616
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgcg-tcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||||||  ||||||||||||||||| |  | ||||||||||||||||| ||||||  |  ||||||||||||||||||| |||  |||||    
T  14698795 ccaagtttctctctctaaaagctctccttcaaaatctacacaagaacacttatatagcagtcttcaactatcaaaatcgtgtcacgtttgtcca-aatcg 14698697  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    ||  | | ||| ||||||||| ||||||||| |||||| |||||||||||||  |||||||||||   ||||||||||||||    
T  14698696 tgaaatggttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaat-gtgcccaacaagttgaaaatcgtgtcacg 14698616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 196
Target Start/End: Original strand, 33118446 - 33118596
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtcttctg-cgtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||||||  ||||||| ||||||||| || | ||||||||||||||||| |||||| |  ||||||||||||||| |||| | || |||||    
T  33118446 ccaagtttctctctctaaaagctcttcttcaaaatctgcacaagaacacttatatagcagtcttcagttgtcaaaatcgtgtcatgtttgt-ccaaatcg 33118544  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaat 196  Q
    || |||||||| ||||||||| |||||||||  ||||| ||||| |||||||    
T  33118545 tgacacgattggtgcgtacgacccaaggtacggccaaccttatcttgaaaat 33118596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 13569640 - 13569789
Alignment:
Q  47 ccaagtttctctctcttc-aagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatc 143  Q
    |||||||||||||||| | ||||||||||| ||||| || | ||||||||||||||||  |||||| || |||||||||||||||  |||||||  ||||    
T  13569640 ccaagtttctctctctcccaagctctcctttaaaatctgcacaagaacacttatatagtagtcttcagctgtcaaaatcgtgtcaaatttttcca-aatc 13569738  T
Q  144 gtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    ||| |||||||| ||| ||||||||||||||| | |||| ||||||||||||    
T  13569739 gtgacacgattggtgcttacgatccaaggtacga-caaccttatcctgaaaa 13569789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 8389935 - 8389786
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    |||||||||||||||||| |||||| ||||||||| || | | ||||||||| ||| | |||||| ||  |||||||||||||| |||||| || ||||     
T  8389935 ccaagtttctctctcttccagctctacttcaaaatctgcacaggaacacttaaataacagtcttcagctatcaaaatcgtgtcatgttttt-ccaaatca 8389837  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || || ||||| ||||||||| |||||||||  ||||| ||||||||||||    
T  8389836 tgacatgattggtgcgtacgacccaaggtacgtccaaccttatcctgaaaa 8389786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 4484565 - 4484642
Alignment:
Q  2 ctctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaa 79  Q
    ||||||| ||||||||||||||||| |||| || | ||||||||||||||||||||||||||| | ||||| ||||||    
T  4484565 ctctaatcaaagaccctaaaccctagagttactccctttgatttcccaagtttctctctcttccaactctctttcaaa 4484642  T

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Target: chr2; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 135
Target Start/End: Complemental strand, 36757547 - 36757458
Alignment:
Q  48 caagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgttttt 135  Q
    |||||||||||| ||||||||||||||||||||| || | ||||||||||||||| | |||||| || ||||||||||||||||| ||||    
T  36757547 caagtttctctcacttcaagctctccttcaaaatctgcacaagaacacttatataacagtcttcagctgtcaaaatcgtgtcacgatttt 36757458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 30833279 - 30833202
Alignment:
Q  2 ctctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaa 79  Q
    ||||||| ||| ||||||||||||| |||| || | ||||||||||||||||||| ||||||| ||||| ||||||||    
T  30833279 ctctaatcaaaaaccctaaaccctagagttactccctttgatttcccaagtttctttctcttccagctcaccttcaaa 30833202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 32289506 - 32289411
Alignment:
Q  2 ctctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacactta 97  Q
    ||||||| |||||| |||||||||| |||| || | ||||||||||||||||||||||||||| | ||| |||||||||| || | |||||||||||    
T  32289506 ctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctctcttccatctc-ccttcaaaatctgcacaagaacactta 32289411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 6266634 - 6266555
Alignment:
Q  1 actctaattaaaga-ccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaa 79  Q
    |||||||| ||||| |||||||||||| ||||||| | ||||||||||||||| |||||||||||   ||||||||||||    
T  6266634 actctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtctctctctcttcccactctccttcaaa 6266555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 36773481 - 36773414
Alignment:
Q  4 ctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctct 71  Q
    ||||| ||||||||| |||||||||||| | || ||||||||||| |||||||||||||| |||||||    
T  36773481 ctaatcaaagaccctcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctct 36773414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 195
Target Start/End: Original strand, 39483235 - 39483336
Alignment:
Q  94 cttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctga 192  Q
    |||||||||| |||||| || |||||||| ||| ||||||| |||  ||||||| |||||||| |||||| || ||||||||| |||||| |||||||||    
T  39483235 cttatatagcagtcttcagctgtcaaaattgtgccacgtttgtcca-aatcgtgacacgattggtgcgtaagacccaaggtacgaccaaccttatcctga 39483333  T
Q  193 aaa 195  Q
    |||    
T  39483334 aaa 39483336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 40015319 - 40015400
Alignment:
Q  148 cacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattg 230  Q
    |||||||||||| ||||||||||||||| |||||| ||||| |||||| | || | | || ||||||||||||||||||||||    
T  40015319 cacgattgatgcttacgatccaaggtacgaccaacattatcatgaaaa-cgtgtcaatcatgccaaaaatcgtgtcacgattg 40015400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 11151824 - 11151895
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    |||||||| ||||||||| |||||||||||| | || |||||||||||||||||  ||||||| ||| ||||    
T  11151824 actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaagttctc 11151895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 33162686 - 33162745
Alignment:
Q  4 ctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctctt 63  Q
    ||||| ||||||||| ||||||||| || | || ||||||||||||||||||||||||||    
T  33162686 ctaatcaaagaccctcaaccctaaaattacctcctttgatttcccaagtttctctctctt 33162745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 42362287 - 42362216
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    |||||||| ||||||||| |||||||||||| | || |||||||||||||||||  ||||||| ||| ||||    
T  42362287 actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaagttctc 42362216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 723977 - 724030
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagttt 54  Q
    |||||||| ||||||||| |||||||||||| | || |||||||||||||||||    
T  723977 actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 724030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 11049468 - 11049402
Alignment:
Q  4 ctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctct 71  Q
    ||||| ||||||| | ||||||||| || | || |||||||||||||||||||||||||| |||||||    
T  11049468 ctaatcaaagaccatcaaccctaaa-ttacctcctttgatttcccaagtttctctctcttgaagctct 11049402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 11690432 - 11690365
Alignment:
Q  5 taattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    |||| ||||||||| |||||||||||| | || |||||||||||||||||  ||||||| ||| ||||    
T  11690432 taatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaagttctc 11690365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 12632950 - 12633017
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagc 68  Q
    ||||| ||||||||| || ||||||||||||   || |||| ||||||||||||||||||||| ||||    
T  12632950 actctcattaaagacactcaaccctaaagttatctcctttggtttcccaagtttctctctcttgaagc 12633017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 14202640 - 14202711
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    |||||||| ||||||||| |||| ||||||| | || |||||||||||||||||  ||||||| ||| ||||    
T  14202640 actctaatcaaagaccctcaaccataaagttacctcatttgatttcccaagttttcctctcttgaagttctc 14202711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 195
Target Start/End: Original strand, 17865590 - 17865637
Alignment:
Q  148 cacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    |||||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  17865590 cacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 17865637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 17865521 - 17865578
Alignment:
Q  53 ttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtctt 109  Q
    |||| |||||||||||||| ||||||||| || | ||||||||||||||||| |||||    
T  17865521 ttctgtctcttcaagctcttcttcaaaatttgcacaagaacacttatatagcagtctt 17865578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 182; Significance: 2e-98; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 30834769 - 30835002
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  30834769 actctaatcaaagaccataaaccctaaagttgcttcctttgatttctcaagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttatat 30834868  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacg-tttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    || ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  30834869 agttgtcttctgtgtcaaaatcgtgtcacgttttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatctt 30834968  T
Q  200 gcccaacaagccaaaaatcgtgtcacgattggac 233  Q
    ||||| ||||||||||||||||||||||||||||    
T  30834969 gcccagcaagccaaaaatcgtgtcacgattggac 30835002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 5406431 - 5406663
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||| || ||| |||||||||||    
T  5406431 actctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagtttctctctcttcaagctcaccttcaaaatctgcaaataacacttatat 5406530  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    |||  ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||| |||||||||    
T  5406531 agcaatcttcagcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctaaaaatcttg 5406630  T
Q  201 cccaacaagccaaaaatcgtgtcacgattggac 233  Q
    |||| ||||||||||||||||||||||||||||    
T  5406631 cccagcaagccaaaaatcgtgtcacgattggac 5406663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 5410756 - 5410988
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||| || ||| |||||||||||    
T  5410756 actctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagtttctctctcttcaagctcaccttcaaaatctgcaaataacacttatat 5410855  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    |||  ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||| |||||||||    
T  5410856 agcaatcttcagcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctaaaaatcttg 5410955  T
Q  201 cccaacaagccaaaaatcgtgtcacgattggac 233  Q
    |||| ||||||||||||||||||||||||||||    
T  5410956 cccagcaagccaaaaatcgtgtcacgattggac 5410988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 31404916 - 31405139
Alignment:
Q  10 aaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatatagctgtctt 109  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||    
T  31404916 aaagaccctaaaccctaaagttgcctcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaataacacttatatagctgtctt 31405015  T
Q  110 ctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaag 209  Q
    | ||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||| ||||||||||| |||| |||| ||||    
T  31405016 cagcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacctaaggtacgaccaaccttatcctgaaagtctttcccagcaag 31405115  T
Q  210 ccaaaaatcgtgtcacgattggac 233  Q
    ||||||| ||||||||||||||||    
T  31405116 ccaaaaaacgtgtcacgattggac 31405139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 16452562 - 16452758
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||    
T  16452562 actctaatcaaagaccctaaactctaaagttgcttactttgatttcccaagtttctctctcttcaagctcaccttcaaaatctgcaaagaacacttatat 16452661  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatc 197  Q
    ||||||||||  |||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||| ||||||||||||||    
T  16452662 agctgtcttcatcgtctaaatcgtgtcacgtttttccccaatcgtgccatgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatc 16452758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 5411489 - 5411694
Alignment:
Q  24 ctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatatagctgtcttctgcgtcaaaatcg 123  Q
    |||||||||| || ||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||  ||||| ||||| ||||||    
T  5411489 ctaaagttgcctcctttgatttcccaagtttctctctcttcaagctcaccttcaaaatctgcaaagaacacttatatagcaatcttcagcgtcgaaatcg 5411588  T
Q  124 tgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtc 223  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||| ||||||||||||||| |||||||||||  |||||    
T  5411589 tgtcacatttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcttgaaaatcttgcccagcaagccaaaaaatgtgtc 5411688  T
Q  224 acgatt 229  Q
    ||||||    
T  5411689 acgatt 5411694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 33160586 - 33160819
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagttt-ctctctcttcaagctctccttcaaaatatgaaaagaacacttata 99  Q
    |||||||| |||||| || |||||||||||| | || ||||||| ||||||||| |||||||||| |||||||| ||||||| || ||||||||||||||    
T  33160586 actctaatcaaagactctcaaccctaaagttacctcctttgattccccaagttttctctctcttccagctctccatcaaaatctgcaaagaacacttata 33160685  T
Q  100 tagctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    |||| |||||| |||||||||| |||||||||||| |  |||||||| |||||||||||||||||| |||| |||| |||||| ||||||||||||||||    
T  33160686 tagcagtcttcagcgtcaaaattgtgtcacgttttccatcaatcgtgtcacgattgatgcgtacgacccaatgtacgaccaaccttatcctgaaaatctt 33160785  T
Q  200 gcccaacaagccaaaaatcgtgtcacgattggac 233  Q
    ||||| ||||||||||||||||||||||||||||    
T  33160786 gcccagcaagccaaaaatcgtgtcacgattggac 33160819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 5407164 - 5407369
Alignment:
Q  24 ctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatatagctgtcttctgcgtcaaaatcg 123  Q
    |||||||||| || ||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||  ||||| ||||| ||||||    
T  5407164 ctaaagttgcctcctttgatttcccaagtttctctctcttcaagctcaccttcaaaatctgcaaagaacacttatatagcaatcttcagcgtcgaaatcg 5407263  T
Q  124 tgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtc 223  Q
    |||||| ||||||  |||||||| |||||||||||||||||| ||||||||| |||||| ||||| ||||||||||||||| |||||||||||  |||||    
T  5407264 tgtcacatttttcttcaatcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcttgaaaatcttgcccagcaagccaaaaaatgtgtc 5407363  T
Q  224 acgatt 229  Q
    ||||||    
T  5407364 acgatt 5407369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 87 - 233
Target Start/End: Original strand, 16452759 - 16452905
Alignment:
Q  87 aagaacacttatatagctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaacttta 186  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||    
T  16452759 aagaacacttatatagctgtcttcatcgtctaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaacctta 16452858  T
Q  187 tcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggac 233  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||    
T  16452859 tcctgaaaatctttcccagcaagccaaaaatcgtgtcacgattggac 16452905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 5413625 - 5413775
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| |||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||| |||||||||| || |||||||||||||||    
T  5413625 actctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagtttctctatcttcaagctcaccttcaaaatctgcaaagaacacttatat 5413724  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacg 151  Q
    |||  ||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  5413725 agcaatcttcagcgtcgaaatcgtgtaacgtttttccccaatcgtgccacg 5413775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 127 - 233
Target Start/End: Original strand, 5413807 - 5413913
Alignment:
Q  127 cacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  5413807 cacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacg 5413906  T
Q  227 attggac 233  Q
    |||||||    
T  5413907 attggac 5413913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 9183264 - 9183393
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||    
T  9183264 actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaaaacttatat 9183363  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacg 130  Q
    ||  |||||| |||||||||||||||||||    
T  9183364 agtagtcttcagcgtcaaaatcgtgtcacg 9183393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 49 - 226
Target Start/End: Original strand, 22964012 - 22964188
Alignment:
Q  49 aagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatatagctgtcttctg-cgtcaaaatcgtgtcacgtttttccccaatcgtgc 147  Q
    |||||||||||| ||||||||||  |||||||| || |||||||||||||||||| |||||| | |||||||||||||||||| ||||||| ||| |||     
T  22964012 aagtttctctcttttcaagctctagttcaaaatctgcaaagaacacttatatagcagtcttcagccgtcaaaatcgtgtcacg-ttttcccaaattgtga 22964110  T
Q  148 cacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    |||| |||  ||||||||| |||||||| |||||| |||||||||||| |||| ||| |||||||||||||||||||||    
T  22964111 cacgtttggcgcgtacgatacaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccaaaaatcgtgtcacg 22964188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 49 - 226
Target Start/End: Complemental strand, 23824381 - 23824205
Alignment:
Q  49 aagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatatagctgtcttctg-cgtcaaaatcgtgtcacgtttttccccaatcgtgc 147  Q
    |||||||||||| ||||||||||  |||||||| || |||||||||||||||||| |||||| | |||||||||||||||||| ||||||| ||| |||     
T  23824381 aagtttctctcttttcaagctctagttcaaaatctgcaaagaacacttatatagcagtcttcagccgtcaaaatcgtgtcacg-ttttcccaaattgtga 23824283  T
Q  148 cacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    |||| |||  ||||||||| |||||||| |||||| |||||||||||| |||| ||| |||||||||||||||||||||    
T  23824282 cacgtttggcgcgtacgatacaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccaaaaatcgtgtcacg 23824205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 31086260 - 31086110
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgcg-tcaaaatcgtgtcacgtttttccccaatcg 144  Q
    |||||||||||||||||| ||||| |||||||||| || | ||||||||||||||||| |||||| ||  ||||||||||||||||||||| || |||||    
T  31086260 ccaagtttctctctcttccagctcaccttcaaaatctgcacaagaacacttatatagcagtcttcagctatcaaaatcgtgtcacgtttttgccaaatcg 31086161  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  31086160 tgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 31086110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 18234394 - 18234543
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    |||||||||| |||||||||||||||||||||||  || | ||||||||||||||||| |||||| || |||||||||||||||||||| |||  |||||    
T  18234394 ccaagtttctttctcttcaagctctccttcaaaaactgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtcca-aatcg 18234492  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  18234493 tgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 18234543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 10076977 - 10076828
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||||||| ||||||||||||||||| || | |||||||  ||||||||  ||||| || |||||| ||||||||||||| |||  |||||    
T  10076977 ccaagtttctctctcttaaagctctccttcaaaatctgcacaagaacatatatatagcaatcttcagctgtcaaagtcgtgtcacgtttgtcca-aatcg 10076879  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  10076878 tgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 10076828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 33211418 - 33211631
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||  ||||||| | || |||||||||||||||||||||||||||||  ||||||||| ||| || |||||||||||||||    
T  33211418 actctaatcaaagaccctcaactgtaaagttacctcctttgatttcccaagtttctctctcttcaacttctccttcacaatctgcaaagaacacttatat 33211517  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    ||| || ||  || ||||||||||||||| |||||  |  ||||||| || | ||| ||||||||| |||| |||| |  |||  |||||| |||| | |    
T  33211518 agcagtattgagctgtcaaaatcgtgtcatgttttgtca-aatcgtgacatggttggtgcgtacgacccaaagtacgataaaccatatcctaaaaa-cgt 33211615  T
Q  200 gcccaacaagccaaaa 215  Q
    ||||||||||||||||    
T  33211616 gcccaacaagccaaaa 33211631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 5017282 - 5017133
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    |||||||||||| ||||    |||||||||||||| || | ||||||||||||||||| |||||| || |||||||||||||||| ||||| |  |||||    
T  5017282 ccaagtttctctttctttttcctctccttcaaaatctgcacaagaacacttatatagcggtcttcagctgtcaaaatcgtgtcacattttttca-aatcg 5017184  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  5017183 tgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 5017133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 2171764 - 2171842
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaa 79  Q
    |||||||| ||||||||||||||||| ||||||| | ||||||||||||||||||||||||||| ||||| ||||||||    
T  2171764 actctaatcaaagaccctaaaccctagagttgctccctttgatttcccaagtttctctctcttctagctcaccttcaaa 2171842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 5757264 - 5757116
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    |||||||||||||||||| ||||||||| |||||| || | || ||||||||| |||| |||||| || |  ||||||||| ||||||||  || |||||    
T  5757264 ccaagtttctctctcttccagctctcctccaaaatctgcacaaaaacacttatttagcagtcttcagctgataaaatcgtgccacgtttt--ccaaatcg 5757167  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    ||||||||||||| | ||||| | ||||||| |||||| ||||||||||||    
T  5757166 tgccacgattgatacatacgaccaaaggtacgaccaaccttatcctgaaaa 5757116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 9183390 - 9183467
Alignment:
Q  148 cacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    |||||||||||||||||| ||||||||| |||||| |||||||||||| |||||||| |||| ||||||||||||||||    
T  9183390 cacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgcccagcaagtcaaaaatcgtgtcacg 9183467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 49 - 229
Target Start/End: Complemental strand, 21272773 - 21272593
Alignment:
Q  49 aagtttctctctcttcaagctctccttcaaaatatgaaaagaa-cacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtg 146  Q
    ||||||||||| ||||||| ||| ||||||||  || |||||| |||||||||||| |||||| |  |||||||| |||||||| ||  ||  |||| ||    
T  21272773 aagtttctctcacttcaagttctacttcaaaaactgcaaagaaacacttatatagcagtcttcagttgtcaaaattgtgtcacgattggcca-aatcttg 21272675  T
Q  147 ccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgatt 229  Q
     |||| ||| ||||||||||||||||||  |||||| |||||||||||| | |||| |||| | ||||||||||| |||||||    
T  21272674 acacggttggtgcgtacgatccaaggtatgaccaaccttatcctgaaaa-cgtgccaaacatgtcaaaaatcgtgacacgatt 21272593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 226
Target Start/End: Complemental strand, 24435755 - 24435579
Alignment:
Q  50 agtttctctctcttcaagctctccttcaaaatatgaaaagaa-cacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgc 147  Q
    |||||||||||||||||||| | ||||||||| || ||| || |||||||||||| ||||||  | |||||| |||||||||| ||  ||  |||||||     
T  24435755 agtttctctctcttcaagctattcttcaaaatttgcaaacaaacacttatatagcagtcttcaactgtcaaattcgtgtcacgattggcca-aatcgtga 24435657  T
Q  148 cacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    |||| ||| ||||||| | ||||||||| |||||| |||||||||||| | |||| ||||||   ||||||||||||||    
T  24435656 cacggttggtgcgtacaacccaaggtacgaccaaccttatcctgaaaa-cgtgccaaacaagttgaaaatcgtgtcacg 24435579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 110
Target Start/End: Original strand, 23896663 - 23896727
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtcttc 110  Q
    ||||||||||||||||||||||||| |||||||||||| | |||||| |||||||||| ||||||    
T  23896663 ccaagtttctctctcttcaagctcttcttcaaaatatgcacaagaactcttatatagcagtcttc 23896727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6097666 - 6097728
Alignment:
Q  1 actctaattaaaga-ccctaaaccctaaagttgcttcttttgatttcccaagtttctctctct 62  Q
    |||||||| ||||| |||||||||||| ||||||| | |||||||||||||||||||||||||    
T  6097666 actctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtttctctctct 6097728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 226
Target Start/End: Complemental strand, 21593267 - 21593159
Alignment:
Q  116 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaa 215  Q
    |||||||||||||| |||| ||| ||||||| |||| ||| | || |||| ||||||||| |||||| ||||||| |||| | |||||| |||||| |||    
T  21593267 caaaatcgtgtcacatttt-cccaaatcgtgacacggttggtacgaacgacccaaggtacgaccaaccttatcctaaaaa-catgcccagcaagccgaaa 21593170  T
Q  216 atcgtgtcacg 226  Q
    |||||||||||    
T  21593169 atcgtgtcacg 21593159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 195
Target Start/End: Original strand, 31979897 - 31979977
Alignment:
Q  114 gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    |||||||||||||||||||| |||  ||||||| |||||||| |||||||||  ||| |||| |||||| ||||||||||||    
T  31979897 gtcaaaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacgactcaaagtacgaccaaccttatcctgaaaa 31979977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 26954675 - 26954731
Alignment:
Q  140 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaat 196  Q
    ||||||| |||| ||||||||||||| ||||||||| |||||| |||||||||||||    
T  26954675 aatcgtgacacggttgatgcgtacgacccaaggtacgaccaaccttatcctgaaaat 26954731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 226
Target Start/End: Original strand, 603612 - 603694
Alignment:
Q  143 cgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    |||| |||| ||| ||||||||||||||| ||| | |||| |||||||||||| |||||||| |||||| |||||| |||||||    
T  603612 cgtgacacgtttggtgcgtacgatccaagatacgatcaaccttatcctgaaaa-cttgcccagcaagccgaaaatcatgtcacg 603694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 23896737 - 23896792
Alignment:
Q  140 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    |||||||||||||||||| ||||||| | ||||||| |||||| ||||||||||||    
T  23896737 aatcgtgccacgattgatacgtacgaccgaaggtacgaccaaccttatcctgaaaa 23896792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 26954518 - 26954589
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    |||||||| |||||| || |||||||||||| | || |||||||||||||||||  ||||||| ||||||||    
T  26954518 actctaatcaaagactctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaagctctc 26954589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 412043 - 411981
Alignment:
Q  2 ctctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttc 64  Q
    ||||||| |||||| |||||||||| |||| || | ||||||||| |||||||||||||||||    
T  412043 ctctaatcaaagactctaaaccctagagttactccctttgatttctcaagtttctctctcttc 411981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 3072987 - 3073045
Alignment:
Q  2 ctctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctct 60  Q
    ||||||| |||||| |||||||||| |||| || | |||||||||||||||||||||||    
T  3072987 ctctaatcaaagactctaaaccctagagtttctccctttgatttcccaagtttctctct 3073045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 3039152 - 3039219
Alignment:
Q  4 ctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    ||||| ||||||||| |||||||||||| | || ||||| ||||||||||| |||||||| ||||||||    
T  3039152 ctaatcaaagaccctcaaccctaaagttacctcctttga-ttcccaagtttttctctcttgaagctctc 3039219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 27647806 - 27647742
Alignment:
Q  1 actctaattaaaga-ccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttc 64  Q
    |||||||| ||||| |||||||||||| |||| || | ||||||||||||||| |||||||||||    
T  27647806 actctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaagtctctctctcttc 27647742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 30684158 - 30684210
Alignment:
Q  20 aaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    |||||||||||| |||  |||||||| ||||||||||||||||| ||||||||    
T  30684158 aaccctaaagttacttgatttgatttaccaagtttctctctcttgaagctctc 30684210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 16567141 - 16567070
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    |||||||| ||||||||| ||||||||||||   || |||||||||||||||||  ||||||| ||| ||||    
T  16567141 actctaatcaaagacccttaaccctaaagttaactcctttgatttcccaagttttcctctcttgaagttctc 16567070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 16568978 - 16568916
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctctt 63  Q
    |||||||| ||||||||| ||||||||| ||  ||| |||||||||||||||||  |||||||    
T  16568978 actctaatcaaagacccttaaccctaaatttaattcctttgatttcccaagttttcctctctt 16568916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 195
Target Start/End: Complemental strand, 26661547 - 26661472
Alignment:
Q  119 aatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    |||| ||||||||||| ||| ||||||| ||   ||| ||||||||| ||||||||| |||||| ||||||||||||    
T  26661547 aatcatgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 26661472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 195
Target Start/End: Complemental strand, 26767518 - 26767443
Alignment:
Q  119 aatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    |||| ||||||||||| ||| ||||||| ||   ||| ||||||||| ||||||||| |||||| ||||||||||||    
T  26767518 aatcatgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 26767443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 434468 - 434239
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||| |||    
T  434468 actctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctcaccttcaaaatctgcaaagaacacttttat 434369  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    ||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||    
T  434368 agcggtcttctgcgtcaaaatcgtgccacgtttttccccaatcgtgccacgatttatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttg 434269  T
Q  201 cccaacaagcca-aaaatcgtgtcacgatt 229  Q
    |||| ||||||| |||||||||||||||||    
T  434268 cccagcaagccaaaaaatcgtgtcacgatt 434239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 157; Significance: 1e-83; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 52082890 - 52083122
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||||||||||| | || |||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||    
T  52082890 actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctgtccttcaaaatttgcaaagaacacttatat 52082989  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    ||  |||||| ||||| ||||||||||||||||||||| ||||||| |||||||||||| ||||| ||||||||  |||||| |||||||||||||||||    
T  52082990 aggagtcttcagcgtcgaaatcgtgtcacgtttttcccaaatcgtgtcacgattgatgcttacgacccaaggtatgaccaaccttatcctgaaaatcttg 52083089  T
Q  201 cccaacaagccaaaaatcgtgtcacgattggac 233  Q
    |||||||||||||||||||||||||||||||||    
T  52083090 cccaacaagccaaaaatcgtgtcacgattggac 52083122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 52093897 - 52094129
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||||||||||| | || |||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||    
T  52093897 actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctgtccttcaaaatttgcaaagaacacttatat 52093996  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    ||  |||||| ||||| ||||||||||||||||||||| ||||||| |||||||||||| ||||| ||||||||  |||||| |||||||||||||||||    
T  52093997 aggagtcttcagcgtcgaaatcgtgtcacgtttttcccaaatcgtgtcacgattgatgcttacgacccaaggtatgaccaaccttatcctgaaaatcttg 52094096  T
Q  201 cccaacaagccaaaaatcgtgtcacgattggac 233  Q
    |||||||||||||||||||||||||||||||||    
T  52094097 cccaacaagccaaaaatcgtgtcacgattggac 52094129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 52095595 - 52095818
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| |||| |||| |||||||||||| | || |||||||||||||||||||||||||||||||| ||||||||||| |  |||||||||||||||    
T  52095595 actctaatcaaagtccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctgtccttcaaaatctacaaagaacacttatat 52095694  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    ||| |||||| ||||| |||||  |||||||||||||   |||||| |||||||||||| ||||| ||||||||| |||||| |||||||||||||||||    
T  52095695 agcagtcttcagcgtcgaaatc--gtcacgtttttcctatatcgtgtcacgattgatgcttacgacccaaggtacgaccaaccttatcctgaaaatcttg 52095792  T
Q  201 cccaacaagccaaaaatcgtgtcacg 226  Q
    |||| |||||||||||||||||||||    
T  52095793 cccagcaagccaaaaatcgtgtcacg 52095818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 30000038 - 30000212
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| |||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||    
T  30000038 actctaatcaaagaccctaaaccctaaagttgtctcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaaaaacacttatat 30000137  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtac 175  Q
    |||  ||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  30000138 agcaatcttcagcgtcgaaatcgtgtcacatttttccccaatcgtgccacgattgatgcgtacgacccaaggtac 30000212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 5 - 229
Target Start/End: Original strand, 5370323 - 5370536
Alignment:
Q  5 taattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatatagct 104  Q
    |||| |||||||||||||||||||||||  || ||||||||| |||||||||||||||||||| ||||||||||||| || ||||||||||||||||| |    
T  5370323 taatcaaagaccctaaaccctaaagttgtctcctttgatttctcaagtttctctctcttcaagttctccttcaaaatctgcaaagaacacttatatagtt 5370422  T
Q  105 gtcttctgcgtcaaaatcgtgtcacg-tttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgccc 203  Q
    |||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||            |||||| ||||||||||| ||||||||    
T  5370423 gtcttcagcgtcgaaatcgtgtcacgttttttccccaatcgtgccacgattgatgcgtacg------------accaaccttatcctgaaagtcttgccc 5370510  T
Q  204 aacaagccaaaaatcgtgtcacgatt 229  Q
    | ||||||||||||||||||||||||    
T  5370511 agcaagccaaaaatcgtgtcacgatt 5370536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 48142977 - 48142756
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc-cttcaaaatatgaaaagaacacttata 99  Q
    |||||||| ||||||||| |||||||||||| | || ||||||||||||||||||||||||||| ||||||| ||||||||  || ||||||||||||||    
T  48142977 actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttctagctctctcttcaaaaactgcaaagaacacttata 48142878  T
Q  100 tagctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    |||| | |||| ||||| ||||||||||||||||||||| ||||||| |||||||||||||||||            |||||| ||||||||||||||||    
T  48142877 tagcagacttcagcgtcgaaatcgtgtcacgtttttcccaaatcgtgtcacgattgatgcgtacg------------accaaccttatcctgaaaatctt 48142790  T
Q  200 gcccaacaagccaaaaatcgtgtcacgattggac 233  Q
    |||||||||||||||||| |||||||||||||||    
T  48142789 gcccaacaagccaaaaattgtgtcacgattggac 48142756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 34570647 - 34570871
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||||||||| | | || ||||||||||||||||||||||| ||| |||||||||||||||| || ||||||||| |||||    
T  34570647 actctaatcaaagaccctcaaccctaaagctacctcctttgatttcccaagtttctctctgttccagctctccttcaaaatctgcaaagaacacatatat 34570746  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    ||  |||||| || ||||||||||||||||| ||||||| ||||||| |||| ||| ||||||||| |||||||||||||||| |||||||||||| |||    
T  34570747 agtagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaa-ctt 34570844  T
Q  200 gcccaacaagccaaaaatcgtgtcacg 226  Q
    | ||| |||||| ||||||||||||||    
T  34570845 gtccagcaagccgaaaatcgtgtcacg 34570871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 5429614 - 5429391
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||    
T  5429614 actctaatcaaagaccctcaaccctaaagttacttcctttgatttcccaagtttctctctcttcaagctctccttcaaggtctgcaaagaacacttatat 5429515  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    ||| || ||| ||||||||||||||||| | |||||||  |||||| |||||||| ||||||||| ||||||||| |||||  ||| |||||||| ||||    
T  5429514 agcagttttcagcgtcaaaatcgtgtcatg-ttttcccacatcgtgacacgattggtgcgtacgacccaaggtacgaccaatcttaacctgaaaa-cttg 5429417  T
Q  201 cccaacaagccaaaaatcgtgtcacg 226  Q
     |||||||||  |||||||| |||||    
T  5429416 tccaacaagctgaaaatcgtatcacg 5429391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 37740561 - 37740337
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| ||||||||| || | || |||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||    
T  37740561 actctaatcaaagaccctcaaccctaaacttacctcctttgatttcccaagtttctctctcttcatgctctccttcaaaatctgcaaagaacacttatat 37740462  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    ||| |||||| || ||||||||||||||||| ||||||| ||||||| |||  ||| || |||||| ||||||||| |||||| |||||||||||| |||    
T  37740461 agcagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacatttggtgtgtacgacccaaggtacgaccaaccttatcctgaaaa-ctt 37740364  T
Q  200 gcccaacaagccaaaaatcgtgtcacg 226  Q
    ||||  |||||| |||||| |||||||    
T  37740363 gccctgcaagccgaaaatcatgtcacg 37740337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 56178869 - 56179082
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||| | |||||||||||| | || ||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||    
T  56178869 actctaatcaaagaccttcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctctctttcaaaatctgcaaagaacacttatat 56178968  T
Q  101 agctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttg 200  Q
    | | |||||| ||||| |||||||||||| ||||||||  |||||| |||||||||||||||||            |||||| |||||||||||||||||    
T  56178969 aacagtcttcagcgtcgaaatcgtgtcacatttttcccagatcgtgtcacgattgatgcgtacg------------accaaccttatcctgaaaatcttg 56179056  T
Q  201 cccaacaagccaaaaatcgtgtcacg 226  Q
    |||| ||||||||||||| |||||||    
T  56179057 cccagcaagccaaaaatcatgtcacg 56179082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 29254429 - 29254198
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||| | ||||||| | ||||||||||||   || ||||||||||||||||||||||||| ||| ||| |||||||||| || |||||||||||||||    
T  29254429 actctactcaaagaccttcaaccctaaagttatctcctttgatttcccaagtttctctctctacaacctcaccttcaaaatctgcaaagaacacttatat 29254330  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    ||| |||||| || |||||||||||||||||||||| || ||||||| |||| ||| ||||||||||||||  ||| |||||| |||| ||||| | |||    
T  29254329 agcagtcttcagctgtcaaaatcgtgtcacgttttt-ccaaatcgtgacacgtttggtgcgtacgatccaaaatacgaccaaccttattctgaata-ctt 29254232  T
Q  200 gcccaacaagccaaaaatcgtgtcacgattggac 233  Q
    |||||||||||| |||||| ||||||||||||||    
T  29254231 gcccaacaagccgaaaatcatgtcacgattggac 29254198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 54200139 - 54200370
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||||||||||| | || |||||||||| |||||||||||||||  |||||| ||||||||  |  |||||||||||||||    
T  54200139 actctaatcaaagaccctcaaccctaaagttacctcctttgatttcctaagtttctctctctttcagctcttcttcaaaaactacaaagaacacttatat 54200238  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    ||| |||||| ||  |||||||||||||||  ||||||| ||||||| |  | ||| ||||||||| ||||||||| |||||| ||||| |||||| |||    
T  54200239 agcagtcttcagctatcaaaatcgtgtcac-attttcccaaatcgtgactagtttggtgcgtacgacccaaggtacgaccaaccttatcttgaaaa-ctt 54200336  T
Q  200 gcccaacaagccaaaaatcgtgtcacgattggac 233  Q
    ||||| |||||| |||||||||||||||||||||    
T  54200337 gcccagcaagccgaaaatcgtgtcacgattggac 54200370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 26175873 - 26176003
Alignment:
Q  5 taattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatatagct 104  Q
    |||| ||||||||| ||| |||||||| | || |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||     
T  26175873 taatcaaagaccctcaactctaaagttacctcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaaagaacacttatatagca 26175972  T
Q  105 gtcttctgc-gtcaaaatcgtgtcacgtttt 134  Q
    |||||| || |||||||||||||||||||||    
T  26175973 gtcttcagctgtcaaaatcgtgtcacgtttt 26176003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 226
Target Start/End: Complemental strand, 36315052 - 36314837
Alignment:
Q  10 aaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtct 108  Q
    |||||| ||||||||||||||| | || |||| |   |||||||| |||||||||||||||||||||||||| || | ||||||||||||||||| ||||    
T  36315052 aaagacactaaaccctaaagttacctcctttg-taatccaagtttatctctcttcaagctctccttcaaaatctgcacaagaacacttatatagcagtct 36314954  T
Q  109 tctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaaca 207  Q
    || || |||||||||||||||||||| | || ||||||| |||||||| ||||||||| ||||||||| |||||| |||||||||||| | |||||| ||    
T  36314953 tcagctgtcaaaatcgtgtcacgtttgt-ccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cgtgcccagca 36314856  T
Q  208 agccaaaaatcgtgtcacg 226  Q
    ||   ||||||||||||||    
T  36314855 agttgaaaatcgtgtcacg 36314837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 226
Target Start/End: Complemental strand, 36329261 - 36329046
Alignment:
Q  10 aaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtct 108  Q
    |||||| ||||||||||||||| | || |||| |   |||||||| |||||||||||||||||||||||||| || | ||||||||||||||||| ||||    
T  36329261 aaagacactaaaccctaaagttacctcctttg-taatccaagtttatctctcttcaagctctccttcaaaatctgcacaagaacacttatatagcagtct 36329163  T
Q  109 tctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaaca 207  Q
    || || |||||||||||||||||||| | || ||||||| |||||||| ||||||||| ||||||||| |||||| |||||||||||| | |||||| ||    
T  36329162 tcagctgtcaaaatcgtgtcacgtttgt-ccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cgtgcccagca 36329065  T
Q  208 agccaaaaatcgtgtcacg 226  Q
    ||   ||||||||||||||    
T  36329064 agttgaaaatcgtgtcacg 36329046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 195
Target Start/End: Complemental strand, 8689318 - 8689134
Alignment:
Q  10 aaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtct 108  Q
    |||||| ||||||||||||||| | || |||| |   ||||||||||||| ||||||||||||||||||||| || | ||||||||||||||||| ||||    
T  8689318 aaagacactaaaccctaaagttacctcctttg-taatccaagtttctctcacttcaagctctccttcaaaatctgcacaagaacacttatatagcagtct 8689220  T
Q  109 tctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || || |||||||||||||||||||||  || ||||||| |||||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  8689219 tcagctgtcaaaatcgtgtcacgtttt--ccaaatcgtggcacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 8689134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 225
Target Start/End: Original strand, 9927694 - 9927917
Alignment:
Q  5 taattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatatagct 104  Q
    |||| ||||||||| |||||||||||| | || ||||||||||||||||||||||||||||||| |||||||||||| || | ||||||||||| ||||     
T  9927694 taatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagccctccttcaaaatctgcagagaacacttatttagca 9927793  T
Q  105 gtcttctgc----gtcaaaa-tcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    ||||||  |    | ||||| | |||||||| ||||||| ||||||| |||| ||| ||||||||| |||||| || |||||| |||||||||||| |||    
T  9927794 gtcttcatcagctgccaaaatttgtgtcacg-ttttcccaaatcgtgacacgtttggtgcgtacgacccaaggaacgaccaaccttatcctgaaaa-ctt 9927891  T
Q  200 gcccaacaagccaaaaatcgtgtcac 225  Q
    | ||| |||||| |||||||||||||    
T  9927892 gtccagcaagccgaaaatcgtgtcac 9927917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 5268986 - 5268837
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||||||||||||||||||||||||| || | ||||||||||||||||| |||||| || || ||||||||||||||||| |||  |||||    
T  5268986 ccaagtttctctctcttcaagctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgttaaaatcgtgtcacgtttgtcca-aatcg 5268888  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  5268887 tgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 5268837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 47 - 226
Target Start/End: Original strand, 54867490 - 54867669
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    |||||||||||||||||||||||||||| |||||| || | ||||||||||||||||  |||||| || |||||||||||||||||||| |||  |||||    
T  54867490 ccaagtttctctctcttcaagctctcctccaaaatctgcacaagaacacttatatagtagtcttcagctgtcaaaatcgtgtcacgtttgtcca-aatcg 54867588  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    || |||||||| ||||||||||||||||||| |||||| |||||| ||||| | |||||| ||||   ||||||||||||||    
T  54867589 tgacacgattggtgcgtacgatccaaggtacgaccaaccttatcc-gaaaaacgtgcccagcaagttgaaaatcgtgtcacg 54867669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 12739783 - 12739917
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||||||||||| | || ||||||||| ||||||||||||||||||| |||  ||||||||| || |||||||||||||||    
T  12739783 actctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaacctccacttcaaaatctgtaaagaacacttatat 12739882  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttt 134  Q
    ||| |||||| || |||||||||||||||||||||    
T  12739883 agcagtcttcagctgtcaaaatcgtgtcacgtttt 12739917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 12747989 - 12748123
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||||||||||| | || ||||||||| ||||||||||||||||||| |||  ||||||||| || |||||||||||||||    
T  12747989 actctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaacctccacttcaaaatctgtaaagaacacttatat 12748088  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttt 134  Q
    ||| |||||| || |||||||||||||||||||||    
T  12748089 agcagtcttcagctgtcaaaatcgtgtcacgtttt 12748123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 47 - 226
Target Start/End: Complemental strand, 25861819 - 25861640
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaaaagaa-cacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||||||  ||||||||||||||||| || |||||| |||||||||||  ||||||  | |||||||||||||||||||| |||  |||||    
T  25861819 ccaagtttctctctctaaaagctctccttcaaaatctgcaaagaaacacttatatagaagtcttcaactgtcaaaatcgtgtcacgtttgtcca-aatcg 25861721  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    || |||||||||||||||||| ||||||||| |||||| |||||||||||| | |||||| ||||   ||||||||||||||    
T  25861720 tgacacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaa-catgcccagcaagttgaaaatcgtgtcacg 25861640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 226
Target Start/End: Complemental strand, 6743201 - 6743022
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||||||||||||||| ||||||||| || | ||||||||||||||||| ||||||  | |||||||| |||||| ||||| ||| |||||    
T  6743201 ccaagtttctctctcttcaagctctacttcaaaatctgcacaagaacacttatatagcagtcttcaactgtcaaaattgtgtcaagtttt-cccaaatcg 6743103  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    || |||||||  ||||||||  ||||||||| |||||| |||||||||||| | |||||||||||   ||||||||||||||    
T  6743102 tgacacgattagtgcgtacgtcccaaggtacgaccaaccttatcctgaaaa-cgtgcccaacaagtttaaaatcgtgtcacg 6743022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 16623079 - 16622931
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    |||||||||||||||||| |||||||||||||||| || | || |||||||||||||| | ||||  | |||||||||||||||||||||  || |||||    
T  16623079 ccaagtttctctctcttctagctctccttcaaaatctgcacaaaaacacttatatagcagccttcacctgtcaaaatcgtgtcacgtttt--ccaaatcg 16622982  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  16622981 tgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 16622931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 16628658 - 16628510
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttc-tgcgtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    |||| ||||||||||||| |||||||||||||||| |||| || |||||||||||||| | |||| |  |||||||||||||||||||||  || |||||    
T  16628658 ccaattttctctctcttctagctctccttcaaaatctgaacaaaaacacttatatagcagccttcatctgtcaaaatcgtgtcacgtttt--ccaaatcg 16628561  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||| ||||||||| ||||||||| |||||| ||||| ||||||    
T  16628560 tgacacgattggtgcgtacgacccaaggtacgaccaaccttatcatgaaaa 16628510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 13992519 - 13992616
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacactta 97  Q
    |||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| || |||| || | |||||||||||    
T  13992519 actctaatcaaagaccctaaaccctaaagttgctacctttgatttcccaagtttctctctcttcaagctctccctccaaatctgcacaagaacactta 13992616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 3777860 - 3778008
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    |||||||||||||||||||||||| |||||||||| || | ||||||| ||||||||| |||||| || ||||||||| ||||| |||||  || || ||    
T  3777860 ccaagtttctctctcttcaagctcaccttcaaaatctgcacaagaacatttatatagcagtcttcagctgtcaaaatcatgtcaagtttt--ccaaaacg 3777957  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||| ||||||||| ||||||||| |||||| ||||| ||||||    
T  3777958 tggcacgattggtgcgtacgacccaaggtacgaccaaccttatcttgaaaa 3778008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 12745669 - 12745799
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| ||| |||||||| | || |||  |||||||||||||||||||||||| |||  ||||||||| || |||||||||||||||    
T  12745669 actctaatcaaagaccctcaactctaaagttacctccttttttttcccaagtttctctctcttcaacctcaacttcaaaatctgcaaagaacacttatat 12745768  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacg 130  Q
    ||| |||||| || |||||||||||| ||||    
T  12745769 agcagtcttcagctgtcaaaatcgtgacacg 12745799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 5147989 - 5148137
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    |||||||||||||  |||||||||||||||||||| || | ||||||||||||||||| |||||   | |  || ||||||||||||||| |   |||||    
T  5147989 ccaagtttctctcatttcaagctctccttcaaaatctgcacaagaacacttatatagcagtcttaaactgataagatcgtgtcacgttttgca--aatcg 5148086  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  5148087 tgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 5148137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 5143571 - 5143720
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtcttc--tgcgtcaaaatcgtgtcacgtttttccccaatc 143  Q
    ||||||||||||  ||||||||||||||||||||| || | ||||||||||||||||| ||||||  |   | ||||||||||||||||||  || ||||    
T  5143571 ccaagtttctcttacttcaagctctccttcaaaatctgcacaagaacacttatatagcagtcttcagtagataaaaatcgtgtcacgtttt--ccaaatc 5143668  T
Q  144 gtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    ||| |||||||| |||| || | ||||||| | |||||| ||||||||||||    
T  5143669 gtgacacgattggtgcgcacaacccaaggtgcgaccaaccttatcctgaaaa 5143720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 30000873 - 30000937
Alignment:
Q  168 caaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattgga 232  Q
    |||||||| |||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  30000873 caaggtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaaatcgtgtcacgattgga 30000937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 225
Target Start/End: Complemental strand, 6655557 - 6655450
Alignment:
Q  116 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaa 215  Q
    ||||||||||||||| ||| ||| ||||||| |||| ||| ||||||||| |||| |||| |||||| |||||||||||| |||||||| ||| || |||    
T  6655557 caaaatcgtgtcacgattt-cccaaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaa-cttgcccagcaaaccgaaa 6655460  T
Q  216 atcgtgtcac 225  Q
    ||||||||||    
T  6655459 atcgtgtcac 6655450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 10047692 - 10047806
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||||||||||||||||||||||||| || | |||||||||||||     ||||||  | |||||||||||||||||||| | || |||||    
T  10047692 ccaagtttctctctcttcaagctctccttcaaaatctgcacaagaacacttata-----gtcttcaactgtcaaaatcgtgtcacgtttgt-ccaaatcg 10047785  T
Q  145 tgccacgattgatgcgtacga 165  Q
    || |||||||| |||||||||    
T  10047786 tgacacgattggtgcgtacga 10047806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 36994459 - 36994368
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaaca 93  Q
    |||||||| ||||||||| ||||  |||||| | || |||||||| |||||||||||||||||||| |||||||||||||| || ||||||||    
T  36994459 actctaatcaaagaccctcaacca-aaagttacctcctttgattttccaagtttctctctcttcaacctctccttcaaaatctgcaaagaaca 36994368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 35662098 - 35661980
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatatagctgtcttctg-cgtcaaaatcgtgtcacgtttttccccaatcgt 145  Q
    |||||||| ||||||||||| |||||| ||||||| || |||||||||||||||||| |||||| |  |||||||| || ||||| |||| || ||||||    
T  35662098 ccaagtttttctctcttcaacctctccatcaaaatctgcaaagaacacttatatagcagtcttcagttgtcaaaattgtatcacg-ttttgccaaatcgt 35662000  T
Q  146 gccacgattgatgcgtacga 165  Q
    | |||| ||| |||||||||    
T  35661999 gacacggttggtgcgtacga 35661980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 195
Target Start/End: Complemental strand, 38152260 - 38152075
Alignment:
Q  10 aaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaag-aacacttatatagctgtct 108  Q
    |||||| || |||||||||||| | || ||||   ||| || ||||||||||||| ||||||  |||||||| || | || |||||||||||||| || |    
T  38152260 aaagacactcaaccctaaagttacctcatttgtaatccaaattttctctctcttccagctctt-ttcaaaatctgcacaggaacacttatatagcagtat 38152162  T
Q  109 tctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || || |||||||||||||||| ||||| |  ||| ||   ||||||||||||||||||||||||||| |||||| |||||| |||||    
T  38152161 tcagctgtcaaaatcgtgtcacattttttcaaaat-gtaaaacgattgatgcgtacgatccaaggtacgaccaaccttatccggaaaa 38152075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 226
Target Start/End: Complemental strand, 26363866 - 26363758
Alignment:
Q  116 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaa 215  Q
    ||||||||||||||| ||| ||| ||| ||| |||| ||| ||||||||| ||||||||  |||||| |||||||||||| ||||| || |||||| |||    
T  26363866 caaaatcgtgtcacgattt-cccaaattgtgacacgtttggtgcgtacgacccaaggtatgaccaaccttatcctgaaaa-cttgctcagcaagccgaaa 26363769  T
Q  216 atcgtgtcacg 226  Q
    |||||||||||    
T  26363768 atcgtgtcacg 26363758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 27417518 - 27417595
Alignment:
Q  116 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaa 194  Q
    ||||||||||||||| ||| ||| ||||||| |||| ||||||||||||| ||||||||| |||||| |||||||||||    
T  27417518 caaaatcgtgtcacgattt-cccaaatcgtgacacggttgatgcgtacgacccaaggtacgaccaaccttatcctgaaa 27417595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 226
Target Start/End: Complemental strand, 41639166 - 41639058
Alignment:
Q  116 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaa 215  Q
    ||||||||||||| | ||| ||| ||||||| |||  ||||||||||||| ||||||||| |||||| |||||||||||| | |||||||||||   |||    
T  41639166 caaaatcgtgtcatggttt-cccaaatcgtgacacagttgatgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cgtgcccaacaagttgaaa 41639069  T
Q  216 atcgtgtcacg 226  Q
    |||||||||||    
T  41639068 atcgtgtcacg 41639058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 46570116 - 46570201
Alignment:
Q  140 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    ||||||| |||| ||||||||||||| |||| |||| |||||| ||||||||||||| ||||||| |||||| ||||| ||||||||    
T  46570116 aatcgtgacacgtttgatgcgtacgacccaaagtacgaccaaccttatcctgaaaat-ttgcccagcaagccgaaaattgtgtcacg 46570201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 5396457 - 5396372
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacg 130  Q
    |||||||||||||||||| |||||||||||||||| ||   ||||||||||||||||| |||||| || |||||||||||| ||||    
T  5396457 ccaagtttctctctcttccagctctccttcaaaatctgctcaagaacacttatatagcagtcttcagctgtcaaaatcgtggcacg 5396372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 31495544 - 31495621
Alignment:
Q  2 ctctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaa 79  Q
    ||||||| ||||||  ||||||||| |||| || | ||||||||||||||||||||||||||| | ||||||||||||    
T  31495544 ctctaatcaaagactataaaccctagagttactccctttgatttcccaagtttctctctcttccaactctccttcaaa 31495621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 226
Target Start/End: Original strand, 50674429 - 50674521
Alignment:
Q  133 tttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    |||||| ||||||| |||| ||| ||||||||| |||||||||||||||| |||||||||||| | |||||| |||||  |||||| |||||||    
T  50674429 tttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaa-cgtgcccagcaagctgaaaatcatgtcacg 50674521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 12745806 - 12745874
Alignment:
Q  158 gcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    |||||||| ||||||||| |||||| |||||||| ||| |||||||| |||||| ||||||||||||||    
T  12745806 gcgtacgacccaaggtacgaccaaccttatcctggaaaacttgcccagcaagccgaaaatcgtgtcacg 12745874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 37229972 - 37230039
Alignment:
Q  4 ctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctct 71  Q
    ||||| |||||||||||||||||||||| | || ||||||||| ||||||| |||||||| |||||||    
T  37229972 ctaatcaaagaccctaaaccctaaagttacctcctttgatttctcaagtttgtctctcttgaagctct 37230039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 46147591 - 46147658
Alignment:
Q  4 ctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctct 71  Q
    ||||| ||||||||| |||||||||||| | || ||||||||||||||||| |||||||| |||||||    
T  46147591 ctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttttctctcttgaagctct 46147658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 45687432 - 45687496
Alignment:
Q  4 ctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagc 68  Q
    ||||| ||||||||| |||||||||||| | || ||||||||||| |||||||||||||| ||||    
T  45687432 ctaatcaaagaccctcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagc 45687496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 13009664 - 13009735
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    |||||||| ||||||||| |||||||||||| | || |||||||||||||||||  ||||||| ||| ||||    
T  13009664 actctaatcaaagacccttaaccctaaagttacctcatttgatttcccaagttttcctctcttgaagttctc 13009735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 54882601 - 54882533
Alignment:
Q  157 tgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    ||||||||| ||||||||| | |||| |||||||||||| | || |||||||||| ||||||||||||||    
T  54882601 tgcgtacgacccaaggtacgatcaaccttatcctgaaaa-cgtgtccaacaagccgaaaatcgtgtcacg 54882533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 5396383 - 5396328
Alignment:
Q  140 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    ||||||| |||||||| ||||||||| ||||||||| | |||| ||||||||||||    
T  5396383 aatcgtggcacgattggtgcgtacgacccaaggtacgatcaaccttatcctgaaaa 5396328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 5871755 - 5871684
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    |||||||| ||||||||  |||||||||||| | || |||||||||||||||||  ||||||| ||| ||||    
T  5871755 actctaatcaaagacccataaccctaaagttacctcctttgatttcccaagttttcctctcttgaagttctc 5871684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 24969046 - 24968975
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctc 72  Q
    |||||||| ||||||| | |||| ||||||| | || ||||||||||||||||| |||||||| ||| ||||    
T  24969046 actctaatcaaagaccgtcaaccttaaagttacctcctttgatttcccaagtttttctctcttgaagttctc 24968975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 36463639 - 36463705
Alignment:
Q  5 taattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctct 71  Q
    |||| ||||||||| || ||||||||| | || | ||||||||||||||| |||||||| |||||||    
T  36463639 taatcaaagaccctcaatcctaaagttacctcctatgatttcccaagtttttctctcttgaagctct 36463705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 52467591 - 52467657
Alignment:
Q  4 ctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctc 70  Q
    ||||| ||||||||| ||||||||| || | || ||||||| ||| |||||||||||||| ||||||    
T  52467591 ctaatcaaagaccctcaaccctaaaattacctcctttgattaccctagtttctctctcttgaagctc 52467657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 12739947 - 12739992
Alignment:
Q  177 accaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgt 222  Q
    |||||| |||||||||||| |||||||| |||||||||||| ||||    
T  12739947 accaaccttatcctgaaaaacttgcccagcaagccaaaaattgtgt 12739992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 12748153 - 12748198
Alignment:
Q  177 accaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgt 222  Q
    |||||| |||||||||||| |||||||| |||||||||||| ||||    
T  12748153 accaaccttatcctgaaaaacttgcccagcaagccaaaaattgtgt 12748198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 80
Target Start/End: Original strand, 18377664 - 18377697
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaa 80  Q
    |||||||||| |||||||||||||||||||||||    
T  18377664 ccaagtttctttctcttcaagctctccttcaaaa 18377697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 26176033 - 26176081
Alignment:
Q  177 accaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    |||||| |||||||||||| |||||||| |||||| ||||||||||||||    
T  26176033 accaaccttatcctgaaaa-cttgcccatcaagccgaaaatcgtgtcacg 26176081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 23043033 - 23043093
Alignment:
Q  10 aaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctc 70  Q
    ||||||| | ||||||||||||   |||||||||||| ||||||||||||| || ||||||    
T  23043033 aaagaccttcaaccctaaagttaaatcttttgatttctcaagtttctctctgttgaagctc 23043093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 42599361 - 42599305
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaaaag-aacacttatatag 102  Q
    ||||||||||||| ||  ||||||||||||||||| || |||| |||||||||||||    
T  42599361 ccaagtttctctcactaaaagctctccttcaaaatctgcaaagaaacacttatatag 42599305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 4 - 226
Target Start/End: Complemental strand, 114522 - 114297
Alignment:
Q  4 ctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaaga----acacttata 99  Q
    ||||| ||||||||| |||||||||||| | || ||||||||| ||||||||||||||||||||||| | |||||||| || |||||    |||||||||    
T  114522 ctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctcacattcaaaatctgcaaagatctaacacttata 114423  T
Q  100 tagctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    |||| | |||| || || ||||||||||||||||| |  |||||||| ||||| |||||||||||| ||||||||| |||||| ||||||||||||| ||    
T  114422 tagcagccttcagcatcgaaatcgtgtcacgttttccatcaatcgtgtcacgagtgatgcgtacgacccaaggtaccaccaaccttatcctgaaaatttt 114323  T
Q  200 gcccaacaagccaaaaatcgtgtcacg 226  Q
    ||||| |||||| ||||||||||||||    
T  114322 gcccagcaagcc-aaaatcgtgtcacg 114297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 20648 - 20872
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatgaaaagaacacttatat 100  Q
    |||||||| ||||||||| |||||||||||| | || |||||||||| |||||||||||||||| |||||||||||||||| || |||||||||||||||    
T  20648 actctaatcaaagaccctcaaccctaaagttacctcctttgatttccaaagtttctctctcttctagctctccttcaaaatctgcaaagaacacttatat 20747  T
Q  101 agctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatctt 199  Q
    | | || ||| ||  |||||||||||| ||| |||| || ||||||| |||| ||  ||||||||| ||||||||| |||||| |||| || |||| |||    
T  20748 aacagttttcagctatcaaaatcgtgttacg-ttttgccaaatcgtgacacgtttagtgcgtacgacccaaggtacgaccaaccttattct-aaaaactt 20845  T
Q  200 gcccaacaagccaaaaatcgtgtcacg 226  Q
     ||||||||||| ||||||||||||||    
T  20846 tcccaacaagccgaaaatcgtgtcacg 20872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 74; Significance: 5e-34; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 52 - 195
Target Start/End: Original strand, 2809 - 2953
Alignment:
Q  52 tttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgcca 149  Q
    |||||||||||||||||||||||||||||| || | ||||||||||||||||| |||||| || || ||||||||||||||||| |||  ||||||| ||    
T  2809 tttctctctcttcaagctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgttaaaatcgtgtcacgtttgtcca-aatcgtgaca 2907  T
Q  150 cgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    |||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  2908 cgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 2953  T

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Target: scaffold0006; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 5996 - 6145
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    |||| |||||||||||||||||||||||||||||| || | ||||||| ||||||||| |||||| || |||||||||||||||||||| |||  ||| |    
T  5996 ccaattttctctctcttcaagctctccttcaaaatctgcacaagaacatttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtcca-aattg 6094  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  6095 tgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 6145  T

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Target: scaffold0006; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 133065 - 132917
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||||||| |||||||||| |||||| || | ||||||||||||||||| |||||| || |  ||||||||| ||||||||  || |||||    
T  133065 ccaagtttctctctctttaagctctcctccaaaatttgcacaagaacacttatatagcagtcttcagctgataaaatcgtgccacgtttt--ccaaatcg 132968  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || |||||||||| ||||||| ||||||||| |||||| ||||||||||||    
T  132967 tgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaa 132917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 36618 - 36470
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||||||||||||||||||||||||| || | |||||||||| |||||| |||||| || |  ||||||||| ||||||||  || |||||    
T  36618 ccaagtttctctctcttcaagctctccttcaaaatctgcacaagaacacttttatagcagtcttcagctgataaaatcgtgccacgtttt--ccaaatcg 36521  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    ||||| ||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  36520 tgccatgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 36470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 43747 - 43599
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    |||||||||||||||||| ||||||||| |||||| || | || |||||||||||||| || ||| || |  ||||||||| ||||||||  || |||||    
T  43747 ccaagtttctctctcttccagctctcctccaaaatctgcacaaaaacacttatatagcagtattcagctgataaaatcgtgccacgtttt--ccaaatcg 43650  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    ||||||||||||| | ||||| ||||||||| |||||| ||||||||||||    
T  43649 tgccacgattgatacatacgacccaaggtacgaccaaccttatcctgaaaa 43599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 22279 - 22201
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaa 79  Q
    |||||||| ||||||||||||||||| ||||||| | ||||||||||||||||||||||||||| ||||| ||||||||    
T  22279 actctaatcaaagaccctaaaccctagagttgctccctttgatttcccaagtttctctctcttctagctcaccttcaaa 22201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 225
Target Start/End: Complemental strand, 11159 - 11052
Alignment:
Q  116 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaa 215  Q
    ||||||||||||||| ||| ||| ||||||| |||| ||| ||||||||| |||| |||| |||||| |||||||||||| |||||||| ||| || |||    
T  11159 caaaatcgtgtcacgattt-cccaaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaa-cttgcccagcaaaccgaaa 11062  T
Q  216 atcgtgtcac 225  Q
    ||||||||||    
T  11061 atcgtgtcac 11052  T

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Target: scaffold1519 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 852 - 783
Alignment:
Q  1 actctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctc 70  Q
    |||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||    
T  852 actctaatcaaagaccctaaaccctaaagttgctgcctttgatttcccaagtttctctctcttctagctc 783  T

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Target: scaffold0014 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 226
Target Start/End: Original strand, 80850 - 80958
Alignment:
Q  116 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaa 215  Q
    ||||||||||||||| ||| ||| ||||||| |||| ||| ||||||||| ||||||||| |||||| |||||||||||| |||||||| |||||| |||    
T  80850 caaaatcgtgtcacgattt-cccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgcccagcaagccgaaa 80947  T
Q  216 atcgtgtcacg 226  Q
    |||||| ||||    
T  80948 atcgtgccacg 80958  T

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Target: scaffold0036 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 85994 - 86096
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacacttatatagctgtcttctg-cgtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    ||||||||||||| ||||||||| ||||||||||| || | ||||||||||||||||| |||||| |  ||||||||||||||||||||| ||  |||||    
T  85994 ccaagtttctctcacttcaagctatccttcaaaatctgcacaagaacacttatatagcagtcttcagttgtcaaaatcgtgtcacgttttcccaaaatcg 86093  T
Q  145 tgc 147  Q
    |||    
T  86094 tgc 86096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 45510 - 45658
Alignment:
Q  47 ccaagtttctctctcttcaagctctccttcaaaatatgaa-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 144  Q
    |||||||||||||||||||||||||  | |||||| || | ||||||||||| ||| |  ||||| || |  ||||||||| ||||||||  || |||||    
T  45510 ccaagtttctctctcttcaagctcttttccaaaatttgcacaagaacacttaaataccaatcttcagctgataaaatcgtgccacgtttt--ccaaatcg 45607  T
Q  145 tgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    || ||||||||||  |||||| ||||||||| |||||| ||||||||||||    
T  45608 tgtcacgattgatatgtacgacccaaggtacgaccaaccttatcctgaaaa 45658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 233
Target Start/End: Complemental strand, 6929 - 6813
Alignment:
Q  116 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaa 215  Q
    ||||||||| ||||||||| | | ||||||| || | ||| ||||||||| |||||||||||||||| |||||||||||| | | || | ||||   |||    
T  6929 caaaatcgtatcacgttttccacaaatcgtgacatggttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaa-cgttcctagcaagttgaaa 6831  T
Q  216 atcgtgtcacgattggac 233  Q
    ||||||||||||||||||    
T  6830 atcgtgtcacgattggac 6813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 8970 - 9065
Alignment:
Q  2 ctctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacactta 97  Q
    ||||||| |||||||||||| |||| |||| || | ||||||||||||||||||||||||||| | |||| ||||||||| || | |||||||||||    
T  8970 ctctaatcaaagaccctaaagcctagagttactccctttgatttcccaagtttctctctcttccaactct-cttcaaaatctgcacaagaacactta 9065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 11396 - 11491
Alignment:
Q  2 ctctaattaaagaccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttcaagctctccttcaaaatatg-aaaagaacactta 97  Q
    ||||||| ||||||| ||||||||| |||| || | ||||||||||||||||||||||||||| | |||| ||||||||| || | |||||||||||    
T  11396 ctctaatcaaagaccataaaccctagagttactccctttgatttcccaagtttctctctcttccaactct-cttcaaaatctgcacaagaacactta 11491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 8110 - 8055
Alignment:
Q  140 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    ||||||| |||||||||| ||||||| ||||||||| |||||| ||||||||||||    
T  8110 aatcgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaa 8055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 17636 - 17721
Alignment:
Q  140 aatcgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 226  Q
    ||||||| |||| ||| |||||||||  || ||||| |||||| ||||| |||||  |||||||| |||||||||||||||||||||    
T  17636 aatcgtgacacgtttggtgcgtacgactcagggtacgaccaaccttatcatgaaag-cttgcccagcaagccaaaaatcgtgtcacg 17721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 133
Target Start/End: Original strand, 17562 - 17650
Alignment:
Q  47 ccaagtttctctctctt-caagctctccttcaaaatatgaaaagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgttt 133  Q
    ||||| ||||||||||| |||||| | ||||||||| |  |||||||||||||||||| || ||| || |||||||||||| |||||||    
T  17562 ccaaggttctctctctttcaagctatacttcaaaatctacaaagaacacttatatagcagttttcagctgtcaaaatcgtgacacgttt 17650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 1300 - 1248
Alignment:
Q  143 cgtgccacgattgatgcgtacgatccaaggtacaaccaactttatcctgaaaa 195  Q
    ||||||||||||||| ||||||| | ||||||| |||||| ||||||||||||    
T  1300 cgtgccacgattgatacgtacgaccgaaggtacgaccaaccttatcctgaaaa 1248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 6217 - 6154
Alignment:
Q  1 actctaattaaaga-ccctaaaccctaaagttgcttcttttgatttcccaagtttctctctcttc 64  Q
    |||||||| ||||| |||||||||||| ||||||  |||| |||||||||||| |||||||||||    
T  6217 actctaatcaaagaaccctaaaccctagagttgccccttt-gatttcccaagtctctctctcttc 6154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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