View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18425_low_15 (Length: 378)

Name: NF18425_low_15
Description: NF18425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18425_low_15
NF18425_low_15
[»] chr1 (50 HSPs)
chr1 (19-268)||(37559533-37559786)
chr1 (146-269)||(8550584-8550706)
chr1 (146-269)||(49918596-49918718)
chr1 (169-269)||(20762914-20763014)
chr1 (146-269)||(10925468-10925590)
chr1 (175-269)||(3157111-3157205)
chr1 (145-269)||(13316150-13316274)
chr1 (146-269)||(833970-834091)
chr1 (146-269)||(28223221-28223343)
chr1 (146-273)||(40122001-40122126)
chr1 (146-269)||(44455406-44455528)
chr1 (146-269)||(13137780-13137902)
chr1 (146-269)||(31659484-31659606)
chr1 (170-269)||(51765645-51765744)
chr1 (146-269)||(28220026-28220148)
chr1 (146-269)||(37503362-37503479)
chr1 (148-242)||(13659153-13659246)
chr1 (146-226)||(45644158-45644237)
chr1 (146-269)||(196710-196831)
chr1 (146-273)||(23555071-23555196)
chr1 (146-269)||(28265359-28265480)
chr1 (146-269)||(50166980-50167101)
chr1 (146-269)||(3846921-3847045)
chr1 (147-269)||(30476247-30476368)
chr1 (145-269)||(1833755-1833877)
chr1 (146-269)||(41361157-41361278)
chr1 (169-269)||(50169037-50169136)
chr1 (150-239)||(3189620-3189708)
chr1 (150-239)||(3198437-3198525)
chr1 (150-239)||(3207276-3207364)
chr1 (145-227)||(927784-927863)
chr1 (146-269)||(4552448-4552570)
chr1 (185-269)||(9987450-9987534)
chr1 (170-269)||(40282625-40282727)
chr1 (185-269)||(20622071-20622157)
chr1 (148-227)||(15820584-15820659)
chr1 (185-269)||(21054206-21054290)
chr1 (146-189)||(19752989-19753032)
chr1 (146-269)||(46065159-46065278)
chr1 (346-378)||(3189467-3189499)
chr1 (346-378)||(3198284-3198316)
chr1 (346-378)||(3207123-3207155)
chr1 (346-378)||(8550786-8550818)
chr1 (346-378)||(9036553-9036585)
chr1 (346-378)||(9987338-9987370)
chr1 (346-378)||(13316351-13316383)
chr1 (346-378)||(20622236-20622268)
chr1 (191-227)||(36683897-36683933)
chr1 (346-378)||(40282514-40282546)
chr1 (346-378)||(44203769-44203801)
[»] chr7 (53 HSPs)
chr7 (146-269)||(23555287-23555410)
chr7 (169-269)||(4179019-4179119)
chr7 (146-269)||(18126892-18127015)
chr7 (150-269)||(43864490-43864609)
chr7 (169-269)||(48409053-48409153)
chr7 (146-269)||(26417562-26417685)
chr7 (145-269)||(35854162-35854286)
chr7 (145-269)||(19502425-19502548)
chr7 (145-269)||(25616101-25616224)
chr7 (146-269)||(27348063-27348185)
chr7 (146-269)||(41648814-41648935)
chr7 (146-269)||(47675936-47676058)
chr7 (147-269)||(48489677-48489798)
chr7 (145-254)||(31732767-31732876)
chr7 (169-269)||(25766779-25766879)
chr7 (146-269)||(1113899-1114021)
chr7 (146-269)||(4586407-4586530)
chr7 (145-269)||(41317237-41317360)
chr7 (146-269)||(14069633-14069755)
chr7 (146-269)||(14379661-14379783)
chr7 (169-269)||(29991299-29991399)
chr7 (146-269)||(48491822-48491944)
chr7 (146-269)||(47673744-47673866)
chr7 (199-269)||(39731617-39731687)
chr7 (159-269)||(495801-495909)
chr7 (146-220)||(23344260-23344332)
chr7 (146-239)||(38671025-38671117)
chr7 (146-266)||(8153587-8153705)
chr7 (146-226)||(36146212-36146291)
chr7 (145-269)||(31105199-31105318)
chr7 (146-201)||(6430441-6430496)
chr7 (146-226)||(24525306-24525385)
chr7 (170-269)||(24790250-24790349)
chr7 (146-201)||(4510339-4510394)
chr7 (146-201)||(4512181-4512236)
chr7 (169-256)||(43503974-43504063)
chr7 (148-201)||(2360774-2360827)
chr7 (145-227)||(30843285-30843365)
chr7 (146-201)||(22270266-22270321)
chr7 (149-267)||(12096969-12097084)
chr7 (199-269)||(30024609-30024678)
chr7 (146-227)||(36574324-36574403)
chr7 (169-201)||(6359768-6359800)
chr7 (346-378)||(6592339-6592371)
chr7 (346-378)||(6594557-6594589)
chr7 (346-378)||(18388759-18388791)
chr7 (346-378)||(18392195-18392227)
chr7 (346-378)||(23555177-23555209)
chr7 (346-378)||(24789978-24790010)
chr7 (346-378)||(29991190-29991222)
chr7 (346-378)||(34310715-34310747)
chr7 (346-378)||(35854051-35854083)
chr7 (346-378)||(39731506-39731538)
[»] chr8 (38 HSPs)
chr8 (146-269)||(15213032-15213155)
chr8 (146-269)||(30143586-30143708)
chr8 (169-269)||(19945181-19945281)
chr8 (169-269)||(31218503-31218603)
chr8 (146-269)||(17982899-17983021)
chr8 (169-269)||(1746041-1746141)
chr8 (146-269)||(4731904-4732026)
chr8 (170-269)||(34254154-34254253)
chr8 (148-269)||(41366420-41366539)
chr8 (170-269)||(34256330-34256429)
chr8 (169-273)||(27811520-27811626)
chr8 (169-269)||(42498441-42498541)
chr8 (169-269)||(44304101-44304201)
chr8 (146-269)||(18105876-18105997)
chr8 (146-269)||(33352396-33352518)
chr8 (145-265)||(4733956-4734076)
chr8 (146-227)||(12702431-12702511)
chr8 (145-269)||(2627984-2628109)
chr8 (146-269)||(6599215-6599333)
chr8 (146-269)||(6674668-6674786)
chr8 (146-242)||(4743027-4743123)
chr8 (146-226)||(5689556-5689635)
chr8 (150-225)||(3303474-3303549)
chr8 (146-269)||(40321322-40321442)
chr8 (146-269)||(43036669-43036791)
chr8 (146-269)||(19491503-19491624)
chr8 (145-273)||(10015317-10015444)
chr8 (146-269)||(1345176-1345297)
chr8 (195-269)||(1292317-1292390)
chr8 (145-227)||(8965491-8965570)
chr8 (146-227)||(8154068-8154147)
chr8 (346-378)||(1746218-1746250)
chr8 (346-378)||(17982790-17982822)
chr8 (346-378)||(25690091-25690123)
chr8 (346-378)||(31218394-31218426)
chr8 (346-378)||(34254330-34254362)
chr8 (346-378)||(34256506-34256538)
chr8 (346-378)||(42498331-42498363)
[»] chr5 (44 HSPs)
chr5 (146-269)||(30682722-30682845)
chr5 (145-269)||(39468347-39468471)
chr5 (170-269)||(36073866-36073965)
chr5 (176-269)||(13343306-13343399)
chr5 (169-269)||(30182834-30182934)
chr5 (169-269)||(16409725-16409825)
chr5 (160-269)||(42428244-42428352)
chr5 (146-269)||(42426035-42426157)
chr5 (145-269)||(18441440-18441563)
chr5 (146-269)||(9789021-9789143)
chr5 (145-269)||(33831925-33832047)
chr5 (146-269)||(5887235-5887356)
chr5 (148-269)||(538267-538387)
chr5 (146-269)||(26178132-26178255)
chr5 (146-269)||(28750455-28750577)
chr5 (146-219)||(534054-534127)
chr5 (146-226)||(3075549-3075629)
chr5 (169-269)||(25413006-25413106)
chr5 (146-269)||(13488447-13488569)
chr5 (146-269)||(31183220-31183341)
chr5 (146-269)||(8565748-8565872)
chr5 (147-269)||(13239998-13240118)
chr5 (146-219)||(19806658-19806729)
chr5 (148-269)||(32637070-32637190)
chr5 (161-269)||(26171012-26171119)
chr5 (146-269)||(16649635-16649756)
chr5 (146-201)||(40147555-40147610)
chr5 (191-269)||(42927139-42927216)
chr5 (145-201)||(38747298-38747354)
chr5 (346-378)||(9789223-9789255)
chr5 (346-378)||(10593395-10593427)
chr5 (346-378)||(16409612-16409644)
chr5 (346-378)||(18441647-18441679)
chr5 (346-378)||(22536289-22536321)
chr5 (346-378)||(25078258-25078290)
chr5 (346-378)||(25136227-25136259)
chr5 (346-378)||(26170899-26170931)
chr5 (346-378)||(26178019-26178051)
chr5 (346-378)||(29720501-29720533)
chr5 (346-378)||(29751159-29751191)
chr5 (346-378)||(37439278-37439310)
chr5 (181-269)||(37439388-37439474)
chr5 (346-378)||(40380228-40380260)
chr5 (346-378)||(40382439-40382471)
[»] chr3 (50 HSPs)
chr3 (169-269)||(5257966-5258066)
chr3 (146-269)||(29813307-29813430)
chr3 (175-273)||(5260151-5260249)
chr3 (146-273)||(7762508-7762635)
chr3 (169-269)||(9635946-9636046)
chr3 (165-269)||(19683706-19683810)
chr3 (146-269)||(29811114-29811237)
chr3 (146-269)||(7764711-7764834)
chr3 (146-269)||(40734743-40734865)
chr3 (146-269)||(40735628-40735750)
chr3 (145-269)||(9634620-9634743)
chr3 (146-269)||(761091-761211)
chr3 (146-269)||(9581529-9581652)
chr3 (145-269)||(37408705-37408828)
chr3 (169-269)||(45095409-45095509)
chr3 (146-269)||(5236257-5236379)
chr3 (146-269)||(22834807-22834928)
chr3 (170-269)||(23199960-23200058)
chr3 (146-269)||(51399060-51399182)
chr3 (145-268)||(29682604-29682727)
chr3 (146-226)||(29196189-29196269)
chr3 (146-269)||(23391712-23391834)
chr3 (146-269)||(23410131-23410253)
chr3 (146-269)||(801335-801463)
chr3 (146-219)||(39153164-39153237)
chr3 (146-226)||(9666270-9666349)
chr3 (170-269)||(7779824-7779923)
chr3 (146-269)||(44700284-44700405)
chr3 (159-242)||(16499287-16499369)
chr3 (146-227)||(27305519-27305597)
chr3 (146-220)||(32891385-32891458)
chr3 (145-225)||(2074882-2074960)
chr3 (146-227)||(51351941-51352020)
chr3 (170-269)||(23197767-23197859)
chr3 (145-269)||(21350810-21350929)
chr3 (146-261)||(31314695-31314808)
chr3 (146-220)||(37406984-37407057)
chr3 (146-189)||(4160059-4160102)
chr3 (346-378)||(45283123-45283155)
chr3 (346-378)||(801229-801261)
chr3 (346-378)||(3617587-3617619)
chr3 (146-201)||(6095390-6095446)
chr3 (346-378)||(6716636-6716668)
chr3 (346-378)||(7762402-7762434)
chr3 (346-378)||(9581419-9581451)
chr3 (346-378)||(19683888-19683920)
chr3 (346-378)||(23197938-23197970)
chr3 (346-378)||(23200137-23200169)
chr3 (346-378)||(45095300-45095332)
chr3 (346-378)||(54635261-54635293)
[»] chr2 (42 HSPs)
chr2 (169-269)||(4502955-4503055)
chr2 (146-269)||(17057169-17057291)
chr2 (146-269)||(17085152-17085274)
chr2 (176-269)||(36205494-36205587)
chr2 (146-269)||(6594804-6594926)
chr2 (146-269)||(36987875-36987997)
chr2 (169-269)||(4484150-4484250)
chr2 (145-269)||(32289814-32289938)
chr2 (169-269)||(45100000-45100100)
chr2 (154-269)||(38312486-38312600)
chr2 (146-269)||(723547-723668)
chr2 (146-269)||(14633628-14633749)
chr2 (146-269)||(34139573-34139694)
chr2 (146-269)||(42362592-42362713)
chr2 (163-269)||(5723072-5723178)
chr2 (145-269)||(2334217-2334339)
chr2 (146-242)||(11690761-11690856)
chr2 (169-269)||(30833594-30833694)
chr2 (146-226)||(33162254-33162333)
chr2 (145-269)||(11151394-11151517)
chr2 (146-269)||(24885832-24885953)
chr2 (148-269)||(11067547-11067667)
chr2 (146-269)||(14202224-14202345)
chr2 (146-269)||(29868115-29868237)
chr2 (146-269)||(39285081-39285202)
chr2 (146-226)||(36773847-36773926)
chr2 (146-269)||(36317813-36317935)
chr2 (146-269)||(2838192-2838313)
chr2 (146-227)||(41455199-41455278)
chr2 (145-217)||(41446431-41446501)
chr2 (181-269)||(6266940-6267028)
chr2 (146-227)||(11049833-11049912)
chr2 (346-378)||(6595005-6595037)
chr2 (191-227)||(12123436-12123472)
chr2 (147-201)||(45727249-45727305)
chr2 (346-378)||(4503132-4503164)
chr2 (346-378)||(6266828-6266860)
chr2 (346-378)||(12647385-12647417)
chr2 (346-378)||(32289701-32289733)
chr2 (346-378)||(36205664-36205696)
chr2 (346-378)||(36988075-36988107)
chr2 (346-378)||(45099891-45099923)
[»] chr6 (35 HSPs)
chr6 (145-269)||(30834332-30834456)
chr6 (146-269)||(16452127-16452250)
chr6 (169-269)||(2171349-2171449)
chr6 (175-269)||(9182859-9182953)
chr6 (169-269)||(5408892-5408992)
chr6 (169-269)||(5413217-5413317)
chr6 (146-269)||(28137211-28137332)
chr6 (146-269)||(26954091-26954212)
chr6 (175-269)||(31404503-31404597)
chr6 (169-269)||(3072579-3072679)
chr6 (146-269)||(16569266-16569389)
chr6 (186-269)||(6097286-6097369)
chr6 (169-269)||(5406025-5406122)
chr6 (169-269)||(5410350-5410447)
chr6 (175-269)||(33160179-33160272)
chr6 (146-201)||(602903-602958)
chr6 (148-226)||(3038729-3038806)
chr6 (146-269)||(14521478-14521603)
chr6 (146-206)||(22963508-22963568)
chr6 (146-206)||(23824825-23824885)
chr6 (170-217)||(412387-412434)
chr6 (151-201)||(22424620-22424670)
chr6 (346-378)||(412239-412271)
chr6 (346-378)||(2171531-2171563)
chr6 (346-378)||(3072758-3072790)
chr6 (346-378)||(6097450-6097482)
chr6 (346-378)||(16452328-16452360)
chr6 (346-378)||(16555006-16555038)
chr6 (346-378)||(16578517-16578549)
chr6 (346-378)||(16616831-16616863)
chr6 (346-378)||(16631562-16631594)
chr6 (346-378)||(16653249-16653281)
chr6 (146-201)||(17758346-17758402)
chr6 (346-378)||(25421443-25421475)
chr6 (346-378)||(34167217-34167249)
[»] chr4 (37 HSPs)
chr4 (148-269)||(56178438-56178558)
chr4 (169-269)||(13992113-13992213)
chr4 (145-269)||(37740871-37740995)
chr4 (146-269)||(48143294-48143417)
chr4 (146-266)||(52082463-52082582)
chr4 (146-269)||(9927258-9927381)
chr4 (146-269)||(48893443-48893564)
chr4 (146-269)||(52095162-52095284)
chr4 (169-269)||(5369904-5370004)
chr4 (145-269)||(54199707-54199830)
chr4 (146-269)||(26175436-26175558)
chr4 (148-269)||(52467159-52467280)
chr4 (146-269)||(34570214-34570336)
chr4 (146-269)||(46147195-46147317)
chr4 (146-269)||(12739353-12739472)
chr4 (146-269)||(12743728-12743847)
chr4 (149-269)||(47038219-47038337)
chr4 (146-271)||(36463196-36463319)
chr4 (146-226)||(45686987-45687066)
chr4 (146-269)||(5872064-5872183)
chr4 (175-269)||(31495132-31495227)
chr4 (169-229)||(29999651-29999711)
chr4 (146-269)||(31474393-31474512)
chr4 (205-269)||(5429925-5429989)
chr4 (145-269)||(6541986-6542105)
chr4 (146-201)||(41639746-41639801)
chr4 (146-201)||(50262487-50262542)
chr4 (176-269)||(29254740-29254831)
chr4 (146-189)||(36994855-36994898)
chr4 (146-226)||(4588240-4588320)
chr4 (148-273)||(37229531-37229652)
chr4 (346-378)||(5370082-5370114)
chr4 (146-214)||(5207651-5207717)
chr4 (346-378)||(8393531-8393563)
chr4 (346-378)||(8395740-8395772)
chr4 (346-378)||(31495315-31495347)
chr4 (346-378)||(56178636-56178668)
[»] scaffold0066 (1 HSPs)
scaffold0066 (146-269)||(20216-20337)
[»] scaffold0286 (2 HSPs)
scaffold0286 (169-264)||(11817-11912)
scaffold0286 (346-378)||(11694-11726)
[»] scaffold1519 (2 HSPs)
scaffold1519 (169-269)||(1162-1262)
scaffold1519 (346-378)||(1052-1084)
[»] scaffold0491 (4 HSPs)
scaffold0491 (170-269)||(10982-11081)
scaffold0491 (170-269)||(8556-8655)
scaffold0491 (346-378)||(8734-8766)
scaffold0491 (346-378)||(11160-11192)
[»] scaffold0002 (2 HSPs)
scaffold0002 (169-269)||(434780-434880)
scaffold0002 (346-378)||(434670-434702)
[»] scaffold0016 (1 HSPs)
scaffold0016 (169-269)||(114849-114950)
[»] scaffold0006 (1 HSPs)
scaffold0006 (148-242)||(148914-149007)
[»] scaffold1668 (1 HSPs)
scaffold1668 (146-269)||(1301-1424)
[»] scaffold0219 (1 HSPs)
scaffold0219 (146-220)||(27250-27321)
[»] scaffold0565 (1 HSPs)
scaffold0565 (346-378)||(2603-2635)


Alignment Details
Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 19 - 268
Target Start/End: Original strand, 37559533 - 37559786
Alignment:
Q  19 tgacctgtattgaaatttaagtcaactgatcttagtatatttgtataacagtatagaacttggctagttctaaaaaagaacaatataaa-tgcaatttca 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37559533 tgacctgtattgaaatttaagtcaactgatcttagtatatttgtataacagtatagaacttggctagttctaaaaaagaacaatataaaatgcaatttca 37559632  T
Q  118 acatcaaattgatatacttgtt---actagctgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaa 214  Q
    ||||||||||||||||||||||   ||||  |||||||||||| ||||||||||||||| ||||| ||||||||| || |||||||||||||||||||||    
T  37559633 acatcaaattgatatacttgttgttactaattgttgtgaattcggactcaaaactcacaccaatataaactatgatgtctggagcaaaggaaagtagtaa 37559732  T
Q  215 ccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    |||||| |||||||||  ||||||||||||||||||||||||||||||||||||    
T  37559733 ccaatatcaaagtgaacacaagcaataatcaacaataacagcacctagatctaa 37559786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 8550584 - 8550706
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  |||||||||||||    
T  8550584 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatca 8550682  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||| ||||||||||||||    
T  8550683 acaataacaacacctagatctaat 8550706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 49918718 - 49918596
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||| ||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  |||||||||||||    
T  49918718 tgttgtaaattcagactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatca 49918620  T
Q  246 acaataacagcacctagatctaat 269  Q
    |||||||||||||||| |||||||    
T  49918619 acaataacagcacctatatctaat 49918596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 20763014 - 20762914
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| ||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  20763014 tcacaccaatacaaactatgatgtgtggagcaaaggaaagtattaaccaatatcaaagtgaattcaagcaataatcaacaataacagcacctagatctaa 20762915  T
Q  269 t 269  Q
    |    
T  20762914 t 20762914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 10925590 - 10925468
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||  |||||||||||||||||||||||| ||||| |||||||||  |||||||||||||    
T  10925590 tgttgtgaattcggactcaaaa-tcacaacaatacaaactatgttgtgtggagcaaaggaaagtagtaatcaatatcaaagtgaacacaagcaataatca 10925492  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||| ||||||||||||||    
T  10925491 acaataacaacacctagatctaat 10925468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 175 - 269
Target Start/End: Complemental strand, 3157205 - 3157111
Alignment:
Q  175 caatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaat 269  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||    
T  3157205 caatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataacagcacctagatctaat 3157111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 145 - 269
Target Start/End: Original strand, 13316150 - 13316274
Alignment:
Q  145 ctgttgtgaattcaga-ctcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataat 243  Q
    ||||||||||||| |  ||||||| ||||| |||||| || ||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13316150 ctgttgtgaattccggtctcaaaa-tcacaccaatacgaaatataatgtgtggagcaaaggaaagtagtaatcaataacaaagtgaatgcaagcaataat 13316248  T
Q  244 caacaataacagcacctagatctaat 269  Q
    ||||||||||||||||||||||||||    
T  13316249 caacaataacagcacctagatctaat 13316274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 833970 - 834091
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||  |||||||||| ||    
T  833970 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaataa-ca 834067  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||| |||| |||||||||    
T  834068 acaataacaacaccaagatctaat 834091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 28223221 - 28223343
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||||||| | ||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||  ||||||| || ||    
T  28223221 tgttgtgaattcggactcaaaactcagaccaatacaaactatgatgtgtggagcaaacgaaagtagtaaccaatatcaaagtgaacacaagcaacaa-ca 28223319  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||||||||||||||    
T  28223320 ataataacaacacctagatctaat 28223343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 146 - 273
Target Start/End: Original strand, 40122001 - 40122126
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||| | |||||||||||||||||||||||||||| | |||||||  ||||||| || ||    
T  40122001 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgcgtggagcaaaggaaagtagtaaccaatatctaagtgaacacaagcaacaa-ca 40122098  T
Q  246 acaataacagcacctagatctaatttag 273  Q
    | ||||||| ||||||||||||||||||    
T  40122099 ataataacaacacctagatctaatttag 40122126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 44455528 - 44455406
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    ||||||||||||  |||||||| ||||| |||||||||||||||  ||||||| |||| ||||| |||||||||| |||||||||  ||| |||||||||    
T  44455528 tgttgtgaattcgtactcaaaa-tcacaccaatacaaactatgatatgtggagaaaagaaaagtggtaaccaatatcaaagtgaacacaaacaataatca 44455430  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||||||||||||||||||    
T  44455429 acaataacagcacctagatctaat 44455406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 13137780 - 13137902
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||| ||||| ||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||  |||||| ||  ||||||| || ||    
T  13137780 tgttgtaaattcggactcaaaactcacaccaatacaaattatgatgtgtggagcaaaggaaagtagtaaccaatttcaaagtaaacacaagcaacaa-ca 13137878  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||||||||||||||    
T  13137879 ataataacaacacctagatctaat 13137902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 31659606 - 31659484
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||| ||||| ||||| ||| ||||| |||||||| |||| |||||||||||||||| |||| ||||  |||||||||||||    
T  31659606 tgttgtgaattcggactcaaaa-tcacaccaatataaaatatgatgtgtggagaaaagaaaagtagtaaccaatatcaaaatgaacacaagcaataatca 31659508  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||| ||||| ||||||||    
T  31659507 acaataacaacaccttgatctaat 31659484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 170 - 269
Target Start/End: Complemental strand, 51765744 - 51765645
Alignment:
Q  170 cacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaat 269  Q
    |||| |||||| || ||||| ||||||||||||||||||||||||||| |||  |||||| |||||||||||||||||||||||| ||||||||||||||    
T  51765744 cacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaaccactaattaagtgagtgcaagcaataatcaacaataacaacacctagatctaat 51765645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 28220026 - 28220148
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| ||||||| ||||| ||| ||||||||||||  ||||||||  ||| ||| || ||    
T  28220026 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggaacaaagaaaattagtaaccaatattaaagtgaacacaaacaacaa-ca 28220124  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||||||||||||||    
T  28220125 ataataacaacacctagatctaat 28220148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 37503362 - 37503479
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||| |||||||| ||||||||||||     |||| |||||||||  |||||||||||||    
T  37503362 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagtaaaggaaagtag-----aatatcaaagtgaacacaagcaataatca 37503455  T
Q  246 acaataacagcacctagatctaat 269  Q
    |||||| || ||||||||||||||    
T  37503456 acaatatcaacacctagatctaat 37503479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 148 - 242
Target Start/End: Original strand, 13659153 - 13659246
Alignment:
Q  148 ttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataa 242  Q
    |||||||||| ||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| | |||||| ||  ||||||||||    
T  13659153 ttgtgaattcggactcaaaa-tcacatcaatacaaactataatgtgtggagcaaaggaaagtagtaaccaacatcaaagtaaacacaagcaataa 13659246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 45644158 - 45644237
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaag 226  Q
    |||||||||||| ||||||||| |||||  |||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  45644158 tgttgtgaattcggactcaaaa-tcacacaaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaag 45644237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 196710 - 196831
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    ||||||||||||  |||||||  ||||| ||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||  ||||||| || ||    
T  196710 tgttgtgaattcgtactcaaat-tcacaccaatacaaattatgatgtgtggagcaaaggaaaatagtaaccaatatcaaagtgaacacaagcaacaa-ca 196807  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| |||||| |||||||    
T  196808 ataataacaacacctacatctaat 196831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 273
Target Start/End: Original strand, 23555071 - 23555196
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||| || || ||||| |||| |||| ||||||||||||| |||||||||| ||||  |||||| ||  ||||||| || ||    
T  23555071 tgttgtgaattcggactcaaaa-tcgcaccaatagaaacaatgatgtgtggagcaaagaaaagtagtaatcaatgtcaaagtaaacacaagcaacaa-ca 23555168  T
Q  246 acaataacagcacctagatctaatttag 273  Q
    ||||||||| ||||||||||||||||||    
T  23555169 acaataacaacacctagatctaatttag 23555196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 28265359 - 28265480
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    ||||| |||||| ||||||||| ||||| ||||||||||||||| |||||||| |||||||| ||||| |||||| |||||||||  ||||||| || ||    
T  28265359 tgttgggaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagtaaaggaaaatagtagccaatatcaaagtgaacacaagcaacaa-ca 28265456  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| || |||||||||||    
T  28265457 ataataacaacatctagatctaat 28265480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 50166980 - 50167101
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    ||||||||| ||  |||||||| ||||| ||| ||||||||||| |||||||||||||||||||||||||||||| |||||| ||  |||| || || ||    
T  50166980 tgttgtgaactcgaactcaaaa-tcacaccaaaacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagaaacaa-ca 50167077  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||||||||||||||    
T  50167078 ataataacaacacctagatctaat 50167101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 3846921 - 3847045
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaata--at 243  Q
    |||||||||||| ||||||||| ||| |  |||||||||||||| |||||||| ||||||||||||||||||||| |||||||||  ||||||| |  |     
T  3846921 tgttgtgaattcggactcaaaa-tcatactaatacaaactatgatgtgtggagtaaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaacaa 3847019  T
Q  244 caacaataacagcacctagatctaat 269  Q
     || ||||||| ||||||||||||||    
T  3847020 taataataacaacacctagatctaat 3847045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 147 - 269
Target Start/End: Original strand, 30476247 - 30476368
Alignment:
Q  147 gttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaa 246  Q
    |||||||||||  |||||||||||||| ||||||||||||| | |||||||| ||||||||||||||||||||  |||||| ||  ||||||| || |||    
T  30476247 gttgtgaattcgaactcaaaactcacaccaatacaaactataatgtgtggagtaaaggaaagtagtaaccaatttcaaagtaaacacaagcaacaa-caa 30476345  T
Q  247 caataacagcacctagatctaat 269  Q
     ||||||| ||| |||| |||||    
T  30476346 taataacaacacttagacctaat 30476368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 145 - 269
Target Start/End: Complemental strand, 1833877 - 1833755
Alignment:
Q  145 ctgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatc 244  Q
    ||||||||||||| ||||||| | ||||| |||||||||||||||  ||||||| |||||||||| |||||||||  |||||| ||  ||||||| || |    
T  1833877 ctgttgtgaattcggactcaata-tcacaccaatacaaactatgatctgtggagtaaaggaaagtcgtaaccaatttcaaagtaaacacaagcaacaa-c 1833780  T
Q  245 aacaataacagcacctagatctaat 269  Q
    || ||||||| ||||||||||||||    
T  1833779 aataataacaacacctagatctaat 1833755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 41361278 - 41361157
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||||||  | ||||| ||||||||| |||||||||||||||||||| ||| ||||| |||||| ||  |||| || || ||    
T  41361278 tgttgtgaattcggactcaaaactctaaccaata-aaactatgatgtgtggagcaaaggaaagtattaatcaatatcaaagtaaacacaagtaacaa-ca 41361181  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||| |||||| |||||||    
T  41361180 acaataacaacacctatatctaat 41361157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 50169037 - 50169136
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| ||||||||||||||| ||||| |||||| ||||||||||||||||| |||||||||  ||| ||| || ||| ||||||| |||||| ||||||    
T  50169037 tcacaccaatacaaactatgatgtgtgaagcaaatgaaagtagtaaccaatatcaaagtgaacacaaacaacaa-caataataacaacacctatatctaa 50169135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 150 - 239
Target Start/End: Complemental strand, 3189708 - 3189620
Alignment:
Q  150 gtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaa 239  Q
    |||||||| ||| ||||| ||||| ||||| ||||||||| || ||||||||||||||||||||||||||  |||||||||  |||||||    
T  3189708 gtgaattcggacacaaaa-tcacaccaatataaactatgatgtctggagcaaaggaaagtagtaaccaatttcaaagtgaacacaagcaa 3189620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 150 - 239
Target Start/End: Complemental strand, 3198525 - 3198437
Alignment:
Q  150 gtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaa 239  Q
    |||||||| ||| ||||| ||||| ||||| ||||||||| || ||||||||||||||||||||||||||  |||||||||  |||||||    
T  3198525 gtgaattcggacacaaaa-tcacaccaatataaactatgatgtctggagcaaaggaaagtagtaaccaatttcaaagtgaacacaagcaa 3198437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 150 - 239
Target Start/End: Complemental strand, 3207364 - 3207276
Alignment:
Q  150 gtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaa 239  Q
    |||||||| ||| ||||| ||||| ||||| ||||||||| || ||||||||||||||||||||||||||  |||||||||  |||||||    
T  3207364 gtgaattcggacacaaaa-tcacaccaatataaactatgatgtctggagcaaaggaaagtagtaaccaatttcaaagtgaacacaagcaa 3207276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 927784 - 927863
Alignment:
Q  145 ctgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagt 227  Q
    ||||||||||||| ||||||||| ||||||||||  ||||||||| |||||||| ||||| |||| |||||||||| ||||||    
T  927784 ctgttgtgaattcggactcaaaa-tcacatcaat--aaactatgatgtgtggagtaaagggaagtggtaaccaatatcaaagt 927863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 4552448 - 4552570
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    ||||| |||||| ||||||||  ||||| ||||||||||||||| | ||| || ||||||||||||||||||||  |||||| ||  |||| || || ||    
T  4552448 tgttgcgaattcggactcaaatttcacaccaatacaaactatgatgcgtgaagtaaaggaaagtagtaaccaatttcaaagtaaacacaagtaacaa-ca 4552546  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||| ||||||||||    
T  4552547 ataataacaacacatagatctaat 4552570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 269
Target Start/End: Complemental strand, 9987534 - 9987450
Alignment:
Q  185 tatgacgtgtggagcaaaggaaagtagtaaccaataa-caaagtgaatgcaagcaataatcaacaataacagcacctagatctaat 269  Q
    ||||| ||||||||||||||| ||| |||||||  || |||||||  ||||||||||||||||||| |||| ||||||||||||||    
T  9987534 tatgatgtgtggagcaaaggagagtggtaaccaccaatcaaagtgtgtgcaagcaataatcaacaa-aacaccacctagatctaat 9987450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 269
Target Start/End: Complemental strand, 40282727 - 40282625
Alignment:
Q  170 cacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaacca--ataacaaa--gtgaatgcaagcaataatcaacaataacagcacctagatc 265  Q
    |||| |||| |||||||||| ||||||||||||||| ||| |||||||  | ||||||  |||  ||||||||||||||||||| |||| ||||||||||    
T  40282727 cacaccaatgcaaactatgatgtgtggagcaaaggagagtggtaaccaccaaaacaaagtgtgtgtgcaagcaataatcaacaa-aacaccacctagatc 40282629  T
Q  266 taat 269  Q
    ||||    
T  40282628 taat 40282625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 20622071 - 20622157
Alignment:
Q  185 tatgacgtgtggagcaaaggaaagtagtaacca-ataacaaa--gtgaatgcaagcaataatcaacaataacagcacctagatctaat 269  Q
    ||||| |||||||||||||||||||||||||||   ||||||  |||  ||||||||||||||||||| |||| ||||||||||||||    
T  20622071 tatgatgtgtggagcaaaggaaagtagtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacaccacctagatctaat 20622157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 148 - 227
Target Start/End: Complemental strand, 15820659 - 15820584
Alignment:
Q  148 ttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagt 227  Q
    |||||||||| ||||||||||||||  |||||  ||||  || ||||||||||||||||||||||||| |||| ||||||    
T  15820659 ttgtgaattcggactcaaaactcac--caata--aacttagatgtgtggagcaaaggaaagtagtaactaatatcaaagt 15820584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 269
Target Start/End: Complemental strand, 21054290 - 21054206
Alignment:
Q  185 tatgacgtgtggagcaaaggaaagtagtaacca-ataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaat 269  Q
    ||||| ||||||||||||||| ||| |||||||   ||| |||||  ||||||||||||||||||| |||| ||||||||||||||    
T  21054290 tatgatgtgtggagcaaaggagagtggtaaccaccaaactaagtgtgtgcaagcaataatcaacaa-aacaccacctagatctaat 21054206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 189
Target Start/End: Complemental strand, 19753032 - 19752989
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatga 189  Q
    |||||||||||||||||||||  ||||| |||||||||||||||    
T  19753032 tgttgtgaattcagactcaaatttcacaccaatacaaactatga 19752989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 46065278 - 46065159
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| |||||||||| |||| ||||  |||| | || |||||||||||| || ||| |||||||||  |||||| ||| ||||||| || ||    
T  46065278 tgttgtgaattcggactcaaaac-caca-caatgaaaacaaagatgtgtggagcaaacgatagttgtaaccaat-tcaaagtaaatacaagcaacaa-ca 46065183  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||||||||||||||    
T  46065182 ataataacaacacctagatctaat 46065159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 3189499 - 3189467
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  3189499 ttgttcacccagttcggtccaaacttgacctac 3189467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 3198316 - 3198284
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  3198316 ttgttcacccagttcggtccaaacttgacctac 3198284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 3207155 - 3207123
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  3207155 ttgttcacccagttcggtccaaacttgacctac 3207123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 8550786 - 8550818
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  8550786 ttgttcacccagttcggtccaaacttgacctac 8550818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 9036585 - 9036553
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  9036585 ttgttcacccagttcggtccaaacttgacctac 9036553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 9987370 - 9987338
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  9987370 ttgttcacccagttcggtccaaacttgacctac 9987338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 13316351 - 13316383
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  13316351 ttgttcacccagttcggtccaaacttgacctac 13316383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 20622236 - 20622268
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  20622236 ttgttcacccagttcggtccaaacttgacctac 20622268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 36683933 - 36683897
Alignment:
Q  191 gtgtggagcaaaggaaagtagtaaccaataacaaagt 227  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  36683933 gtgtggagcaaaggaaagtggtaaccaatatcaaagt 36683897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 40282546 - 40282514
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  40282546 ttgttcacccagttcggtccaaacttgacctac 40282514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 44203801 - 44203769
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  44203801 ttgttcacccagttcggtccaaacttgacctac 44203769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 5e-47; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 23555410 - 23555287
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  |||||||||||||    
T  23555410 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatca 23555311  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||| ||||||||||||||    
T  23555310 acaataacaacacctagatctaat 23555287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 4179119 - 4179019
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4179119 tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgtaagcaataatcaacaataacagcacctagatctaa 4179020  T
Q  269 t 269  Q
    |    
T  4179019 t 4179019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 18127015 - 18126892
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||| ||||| |||||||||  |||||||||||||    
T  18127015 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagtaaaggaaagtagtaatcaatatcaaagtgaacacaagcaataatca 18126916  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||||||||||||||    
T  18126915 agaataacaacacctagatctaat 18126892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 150 - 269
Target Start/End: Complemental strand, 43864609 - 43864490
Alignment:
Q  150 gtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaa 249  Q
    |||||||| ||||||||||||||| ||||||||||||||| |||||||| |||||||||| |||| ||||| |||||||||  |||||||||||||||||    
T  43864609 gtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagtaaaggaaagtggtaatcaatatcaaagtgaacacaagcaataatcaacaa 43864510  T
Q  250 taacagcacctagatctaat 269  Q
    ||||||||||||||||||||    
T  43864509 taacagcacctagatctaat 43864490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 48409153 - 48409053
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| |||||| || ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  48409153 tcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaaccaataacaaagtgagtgcaagcaataatcaacaataacagcacctagatctaa 48409054  T
Q  269 t 269  Q
    |    
T  48409053 t 48409053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 26417685 - 26417562
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||||||||| |||||||||||||||  ||||||| ||||||||||||||||||||| |||||| |   |||||||||||||    
T  26417685 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatatgtggagtaaaggaaagtagtaaccaatatcaaagtaaccacaagcaataatca 26417586  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||||||||||||| ||||    
T  26417585 acaataacagcacctagatataat 26417562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 145 - 269
Target Start/End: Complemental strand, 35854286 - 35854162
Alignment:
Q  145 ctgttgtgaattc-agactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataat 243  Q
    ||||||||||||| || ||||||| |||||  |||||||||||||| |||||||||||||||||||||||||||||| |||||||||  ||| |||||||    
T  35854286 ctgttgtgaattccagtctcaaaa-tcacacaaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaaacaataat 35854188  T
Q  244 caacaataacagcacctagatctaat 269  Q
    ||||||||||||||||||||||||||    
T  35854187 caacaataacagcacctagatctaat 35854162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 145 - 269
Target Start/End: Complemental strand, 19502548 - 19502425
Alignment:
Q  145 ctgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatc 244  Q
    |||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||  |||||| ||| ||||||| || |    
T  19502548 ctgttgtgaattcagactcaaaactcacactaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatttcaaagtaaatacaagcaacaa-c 19502450  T
Q  245 aacaataacagcacctagatctaat 269  Q
    || ||||||| ||||||||||||||    
T  19502449 aataataacaacacctagatctaat 19502425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 145 - 269
Target Start/End: Complemental strand, 25616224 - 25616101
Alignment:
Q  145 ctgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatc 244  Q
    ||||||||||| |  |||||||| ||||| ||||||||||||||| || ||||||||||||||||||||||||||| |||||||||  ||||||||||||    
T  25616224 ctgttgtgaatacgtactcaaaa-tcacaccaatacaaactatgatgtatggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatc 25616126  T
Q  245 aacaataacagcacctagatctaat 269  Q
    |||||||||| ||||||||||||||    
T  25616125 aacaataacaacacctagatctaat 25616101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 27348185 - 27348063
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||| |||||  |||||||| ||||| ||||||||||||||||||||| |||||||| |||||||||  ||| |||||||||    
T  27348185 tgttgtgaattcggactcaaaa-tcacacaaatacaaattatgatgtgtggagcaaaggaaagtagcaaccaatatcaaagtgaacacaaacaataatca 27348087  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||||||||||||||||||    
T  27348086 acaataacagcacctagatctaat 27348063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 41648814 - 41648935
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||  |||||||||| ||    
T  41648814 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaactaatatcaaagtgaacacaagcaataa-ca 41648911  T
Q  246 acaataacagcacctagatctaat 269  Q
    |||||| |||||||||||||||||    
T  41648912 acaatagcagcacctagatctaat 41648935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 47675936 - 47676058
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  ||||||| || ||    
T  47675936 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaa-ca 47676034  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||||||||||||||    
T  47676035 ataataacaacacctagatctaat 47676058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 147 - 269
Target Start/End: Complemental strand, 48489798 - 48489677
Alignment:
Q  147 gttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaa 246  Q
    ||||||||||| ||||||||| ||||| |||||| |||||||| |||||||||||||||||||||||||||||| |||||||||    ||||||||||||    
T  48489798 gttgtgaattcggactcaaaa-tcacaccaataccaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacatgagcaataatcaa 48489700  T
Q  247 caataacagcacctagatctaat 269  Q
    |||||||| ||||||||||||||    
T  48489699 caataacaacacctagatctaat 48489677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 145 - 254
Target Start/End: Original strand, 31732767 - 31732876
Alignment:
Q  145 ctgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatc 244  Q
    ||||||||||||| ||||||||||||||| || |||||||||||| |||||||||||| ||||||||||||||||  |||||||||  ||||||||||||    
T  31732767 ctgttgtgaattcggactcaaaactcacaccagtacaaactatgatgtgtggagcaaatgaaagtagtaaccaatttcaaagtgaacacaagcaataatc 31732866  T
Q  245 aacaataaca 254  Q
    ||||||||||    
T  31732867 aacaataaca 31732876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 25766779 - 25766879
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| |||||| || ||||| ||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  25766779 tcacaccaatacgaaatatgatgtgtggagcaaagaaaagtagtaaccaataacaaagtgagcgcaagcaataatcaacaataacagcacctagatctaa 25766878  T
Q  269 t 269  Q
    |    
T  25766879 t 25766879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 1114021 - 1113899
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||| |||||| ||  |||||||||| ||    
T  1114021 tgttgtgaattccgaatcaaaactcacatcaatacaaactatgatgtgtggagcaaaggaaagtggtaactaatatcaaagtaaacacaagcaataa-ca 1113923  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||| | ||||||||||||||    
T  1113922 acaataataacacctagatctaat 1113899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 4586530 - 4586407
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| |||||||| |||||| ||||  ||||||||| ||||||||||||||||||| |||||||||  |||||||||  ||||||||||| |    
T  4586530 tgttgtgaattcggactcaaatctcacaccaatgtaaactatgatgtgtggagcaaaggaaagtggtaaccaatttcaaagtgaacacaagcaataataa 4586431  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||| ||||||||||||||    
T  4586430 acaataacaacacctagatctaat 4586407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 145 - 269
Target Start/End: Original strand, 41317237 - 41317360
Alignment:
Q  145 ctgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatc 244  Q
    |||||||||||||  ||||||| |||||| ||||||||||||||| || ||||||||||||||||||||||||||| |||||||||  ||||||| || |    
T  41317237 ctgttgtgaattcgaactcaaatctcacaccaatacaaactatgatgtttggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaa-c 41317335  T
Q  245 aacaataacagcacctagatctaat 269  Q
    || ||||||| ||||||||||||||    
T  41317336 aataataacaacacctagatctaat 41317360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 14069633 - 14069755
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||  |||||| ||  ||||||| ||| |    
T  14069633 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaactaatttcaaagtaaacacaagcaacaat-a 14069731  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||||||||||||||    
T  14069732 ataataacaacacctagatctaat 14069755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 14379661 - 14379783
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||  |||||| ||  ||||||| ||| |    
T  14379661 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaactaatttcaaagtaaacacaagcaacaat-a 14379759  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||||||||||||||    
T  14379760 ataataacaacacctagatctaat 14379783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 29991399 - 29991299
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||   |||| ||||||||||||||||| |||||||||||||    
T  29991399 tcacaccaatacaaactatgatgtgtggagcaaagaaaagtagtaaccaatatcaaagtgagcacaagtaataatcaacaataacaacacctagatctaa 29991300  T
Q  269 t 269  Q
    |    
T  29991299 t 29991299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 48491944 - 48491822
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| || |||||| ||||| |||||| |||||| | ||| |||| ||||||||||||||||||||| |||||||||  |||||||||||||    
T  48491944 tgttgtgaattcggattcaaaa-tcacaccaataccaactataatgtgcggagtaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatca 48491846  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||| | ||||||||||||    
T  48491845 acaataacaacgcctagatctaat 48491822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 47673744 - 47673866
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||| ||||||| ||| ||||||||||| ||||||||||||||| ||||||| |||| ||||||||||||||||| |||||||||  ||| ||| || ||    
T  47673744 tgttatgaattcggacacaaaactcacaccaatacaaactatgatgtgtggaacaaaagaaagtagtaaccaatatcaaagtgaacacaaacaacaa-ca 47673842  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||||||||||||||    
T  47673843 ataataacaacacctagatctaat 47673866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 199 - 269
Target Start/End: Complemental strand, 39731687 - 39731617
Alignment:
Q  199 caaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaat 269  Q
    ||||| ||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||    
T  39731687 caaagaaaagtagtaaccaataacaaagtgggtgcaagcaataatcaacaataacaacacctagatctaat 39731617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 159 - 269
Target Start/End: Original strand, 495801 - 495909
Alignment:
Q  159 gactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcac 258  Q
    ||||||||| |||||  |||||||| |||||  ||||||||||||||||||||||||||||| |||||| ||  ||| |||||| ||||||||||| |||    
T  495801 gactcaaaa-tcacactaatacaaattatgatatgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaaacaataa-caacaataacaacac 495898  T
Q  259 ctagatctaat 269  Q
    |||||||||||    
T  495899 ctagatctaat 495909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 146 - 220
Target Start/End: Complemental strand, 23344332 - 23344260
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaata 220  Q
    |||||||||||||||| ||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  23344332 tgttgtgaattcagacccaaaa-tcacatcaata-aaactatgatgtgtggagcaaaggaaagtagtaaccaata 23344260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 146 - 239
Target Start/End: Original strand, 38671025 - 38671117
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaa 239  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||| ||||||||||||||||| ||||||| || | |||||||||  |||||||    
T  38671025 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaaatagtaacaaaaatcaaagtgaacacaagcaa 38671117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 146 - 266
Target Start/End: Complemental strand, 8153705 - 8153587
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    ||||| |||||| ||||||||| |||||  |||||||||||||| | |||||||||||||||||||||| ||||| ||||||||   ||||||| || ||    
T  8153705 tgttgggaattcggactcaaaa-tcacactaatacaaactatgatgcgtggagcaaaggaaagtagtaatcaatatcaaagtgagcacaagcaacaa-ca 8153608  T
Q  246 acaataacagcacctagatct 266  Q
    | ||||||| |||||||||||    
T  8153607 ataataacaacacctagatct 8153587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 36146212 - 36146291
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaag 226  Q
    |||||||||||| ||||||||| | |||  |||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  36146212 tgttgtgaattcggactcaaaatt-acacaaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaag 36146291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 269
Target Start/End: Original strand, 31105199 - 31105318
Alignment:
Q  145 ctgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatc 244  Q
    |||||||||||||  || ||||||||||| ||||| ||||||||| |||||||| ||||||||||||||| ||||| |||||| ||  |||||||    |    
T  31105199 ctgttgtgaattcgaacacaaaactcacaccaata-aaactatgatgtgtggagtaaaggaaagtagtaatcaatatcaaagtaaacacaagcaa----c 31105293  T
Q  245 aacaataacagcacctagatctaat 269  Q
    |||||||||| |||| |||||||||    
T  31105294 aacaataacaacaccaagatctaat 31105318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 146 - 201
Target Start/End: Complemental strand, 6430496 - 6430441
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaa 201  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||    
T  6430496 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaa 6430441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 24525306 - 24525385
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaag 226  Q
    ||||||||||||| | |||||| |||||||||||||||||||||  |||| ||||||| |||||||||| ||||| |||||    
T  24525306 tgttgtgaattcaaattcaaaa-tcacatcaatacaaactatgatatgtgtagcaaagaaaagtagtaatcaatatcaaag 24525385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 269
Target Start/End: Complemental strand, 24790349 - 24790250
Alignment:
Q  170 cacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaacca-ataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    |||| |||| |||| ||||| ||||||||||| ||||||| |||||||   |||||||||  |||||| |||||||||||| |||| |||||||||||||    
T  24790349 cacaccaatgcaaagtatgatgtgtggagcaacggaaagtggtaaccaccaaacaaagtgcgtgcaagtaataatcaacaa-aacaccacctagatctaa 24790251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 4510339 - 4510394
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaa 201  Q
    |||||||||||| ||||||||  ||||| ||||||||||||||| |||||||||||    
T  4510339 tgttgtgaattcggactcaaatttcacaccaatacaaactatgatgtgtggagcaa 4510394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 4512181 - 4512236
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaa 201  Q
    |||||||||||| ||||||||  ||||| ||||||||||||||| |||||||||||    
T  4512181 tgttgtgaattcggactcaaatttcacaccaatacaaactatgatgtgtggagcaa 4512236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 43503974 - 43504063
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaa--gtgaatgcaagcaataatcaacaataacagc 256  Q
    ||||| |||||| || ||||| ||||||||||||||| ||| |||||||  ||||||  |||  ||||||||||||||||||| ||||||    
T  43503974 tcacaccaatacgaaatatgatgtgtggagcaaaggagagtggtaaccaccaacaaagtgtgtgtgcaagcaataatcaacaaaaacagc 43504063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 2360774 - 2360827
Alignment:
Q  148 ttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaa 201  Q
    |||||||||  ||||||||| ||||| ||||||||||||||| |||||||||||    
T  2360774 ttgtgaatttggactcaaaattcacaccaatacaaactatgatgtgtggagcaa 2360827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 30843285 - 30843365
Alignment:
Q  145 ctgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaa-ggaaagtagtaaccaataacaaagt 227  Q
    |||||||||||||||| |||||| ||||| |||||  ||||  || |||||||||||| |||||||||||||||||| ||||||    
T  30843285 ctgttgtgaattcagaatcaaaa-tcacaccaata--aacttagaagtgtggagcaaaaggaaagtagtaaccaatatcaaagt 30843365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 201
Target Start/End: Complemental strand, 22270321 - 22270266
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaa 201  Q
    |||| ||||||| ||||||||  ||||| ||||||||||||||| |||||||||||    
T  22270321 tgttatgaattcggactcaaatttcacagcaatacaaactatgatgtgtggagcaa 22270266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 267
Target Start/End: Original strand, 12096969 - 12097084
Alignment:
Q  149 tgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaaca 248  Q
    ||||||||| ||||||||| ||||| || || ||||||||| |  ||||  ||||||||||||||||||||| |||||||||  ||| ||| || ||| |    
T  12096969 tgtgaattcggactcaaaa-tcacacca-tataaactatgatgcttggaataaaggaaagtagtaaccaatatcaaagtgaacacaatcaacaa-caata 12097065  T
Q  249 ataacagcacctagatcta 267  Q
    | |||| ||||||||||||    
T  12097066 acaacaacacctagatcta 12097084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 269
Target Start/End: Original strand, 30024609 - 30024678
Alignment:
Q  199 caaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaat 269  Q
    |||||||||||||||||||||  |||||| ||  ||||||| || ||| ||||||| ||||||||||||||    
T  30024609 caaaggaaagtagtaaccaatttcaaagtaaacacaagcaacaa-caataataacaacacctagatctaat 30024678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 227
Target Start/End: Original strand, 36574324 - 36574403
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagt 227  Q
    ||||||||||||||||||||  |||||| ||||  |||||  || ||||||| ||||||||| || ||||||||| ||||||    
T  36574324 tgttgtgaattcagactcaattctcacaccaat--aaacttagatgtgtggatcaaaggaaaatattaaccaatatcaaagt 36574403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 6359768 - 6359800
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaa 201  Q
    ||||||||||||||||||||| |||||||||||    
T  6359768 tcacatcaatacaaactatgatgtgtggagcaa 6359800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 6592339 - 6592371
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  6592339 ttgttcacccagttcggtccaaacttgacctac 6592371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 6594557 - 6594589
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  6594557 ttgttcacccagttcggtccaaacttgacctac 6594589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 18388759 - 18388791
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  18388759 ttgttcacccagttcggtccaaacttgacctac 18388791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 18392195 - 18392227
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  18392195 ttgttcacccagttcggtccaaacttgacctac 18392227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 23555209 - 23555177
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  23555209 ttgttcacccagttcggtccaaacttgacctac 23555177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 24790010 - 24789978
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  24790010 ttgttcacccagttcggtccaaacttgacctac 24789978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 29991222 - 29991190
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  29991222 ttgttcacccagttcggtccaaacttgacctac 29991190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 34310715 - 34310747
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  34310715 ttgttcacccagttcggtccaaacttgacctac 34310747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 35854083 - 35854051
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  35854083 ttgttcacccagttcggtccaaacttgacctac 35854051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 39731538 - 39731506
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  39731538 ttgttcacccagttcggtccaaacttgacctac 39731506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 1e-44; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 15213155 - 15213032
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  ||| |||||||||    
T  15213155 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaaacaataatca 15213056  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||||||||| ||||||||    
T  15213055 acaataacagcaccttgatctaat 15213032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 30143708 - 30143586
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  |||||||||||||    
T  30143708 tgttgtgaattcagactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatca 30143610  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||| ||||||||||||||    
T  30143609 acaataacaacacctagatctaat 30143586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 19945181 - 19945281
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19945181 tcacaccaatacaaactttgatgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 19945280  T
Q  269 t 269  Q
    |    
T  19945281 t 19945281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 31218603 - 31218503
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| ||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31218603 tcacaccaatataaactatgatgtgtggagcaaaggaaagtagcaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 31218504  T
Q  269 t 269  Q
    |    
T  31218503 t 31218503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 17983021 - 17982899
Alignment:
Q  146 tgttgtgaattcaga-ctcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatc 244  Q
    |||||||||||| || ||||||  ||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||  ||||||||||||    
T  17983021 tgttgtgaattccgatctcaaa--tcacaccaatacaaactatgatgtgtggagcaaaggaacgtagtaaccaataacaaagtgaacacaagcaataatc 17982924  T
Q  245 aacaataacagcacctagatctaat 269  Q
    |||||||||||||||||||||||||    
T  17982923 aacaataacagcacctagatctaat 17982899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 1746041 - 1746141
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| |||||| |||||||| |||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  1746041 tcacaccaatacgaactatgatgtgtggagtaaaggaaagtagtaaccaataacaaagtgaacacaagcaataatcaacaataacagcacctagatctaa 1746140  T
Q  269 t 269  Q
    |    
T  1746141 t 1746141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 4732026 - 4731904
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    ||||||||||||  |||||||| ||||| |||||||||| |||| |||||||||||||||||||||||||| ||| |||||||||  ||| |||||||||    
T  4732026 tgttgtgaattcgaactcaaaa-tcacaccaatacaaacaatgatgtgtggagcaaaggaaagtagtaaccgatatcaaagtgaacacaaacaataatca 4731928  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||||||||||||||||||    
T  4731927 acaataacagcacctagatctaat 4731904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 170 - 269
Target Start/End: Original strand, 34254154 - 34254253
Alignment:
Q  170 cacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaat 269  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||   |||||||||||||||||||||||||||||||||||||    
T  34254154 cacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgagcacaagcaataatcaacaataacagcacctagatctaat 34254253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 148 - 269
Target Start/End: Original strand, 41366420 - 41366539
Alignment:
Q  148 ttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaac 247  Q
    |||||||||| ||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||  |||||||||| ||||    
T  41366420 ttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaataa-caac 41366517  T
Q  248 aataacagcacctagatctaat 269  Q
    ||||||| ||||||||||||||    
T  41366518 aataacaacacctagatctaat 41366539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 170 - 269
Target Start/End: Original strand, 34256330 - 34256429
Alignment:
Q  170 cacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaat 269  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||  |||||||   |||||||||||||||||||||||||||||||||||||    
T  34256330 cacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatattaaagtgagcacaagcaataatcaacaataacagcacctagatctaat 34256429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 169 - 273
Target Start/End: Complemental strand, 27811626 - 27811520
Alignment:
Q  169 tcacatcaatacaaactat--gacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatct 266  Q
    ||||| |||||||||||||  || |||||||| ||||||||||||||||||||| |||||||||  |||||||||||||||||||||| |||||||||||    
T  27811626 tcacaccaatacaaactatatgatgtgtggaggaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataacaacacctagatct 27811527  T
Q  267 aatttag 273  Q
    |||||||    
T  27811526 aatttag 27811520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 42498541 - 42498441
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| ||||||||| ||||| ||||||||||||||||||||| |||||||| |||||||||  ||||||||||| |||||||||| |||||||||||||    
T  42498541 tcacaccaatacaaaatatgatgtgtggagcaaaggaaagtagcaaccaatatcaaagtgaacacaagcaataattaacaataacaacacctagatctaa 42498442  T
Q  269 t 269  Q
    |    
T  42498441 t 42498441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 44304201 - 44304101
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||||||||||||  |||||||   |||||||||||||||||||||| |||||||||||||    
T  44304201 tcacaccaatacatactatgatgtgtggagcaaaggaaagtagtaaccaatattaaagtgagcacaagcaataatcaacaataacaacacctagatctaa 44304102  T
Q  269 t 269  Q
    |    
T  44304101 t 44304101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 18105876 - 18105997
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||| ||||||||||||||||| |||||  |||||||||||||| |||| |||||||||||||||||||||||||  ||||| ||  |||||||||| ||    
T  18105876 tgttatgaattcagactcaaaa-tcacactaatacaaactatgatgtgtagagcaaaggaaagtagtaaccaatattaaagtaaacacaagcaataa-ca 18105973  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||| ||||||||||||||    
T  18105974 acaataacatcacctagatctaat 18105997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 33352518 - 33352396
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    ||||||||||||  |||||||| ||||| ||||| ||| |||||  ||||||||||||||||||| ||||||||| |||||||||  |||||||||||||    
T  33352518 tgttgtgaattcgtactcaaaa-tcacaccaatataaattatgatatgtggagcaaaggaaagtaataaccaatatcaaagtgaacacaagcaataatca 33352420  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||| |||||| |||||||    
T  33352419 acaataacaacacctaaatctaat 33352396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 4734076 - 4733956
Alignment:
Q  145 ctgttgtgaattcagactcaaaactcacatcaatacaaacta-tgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataat 243  Q
    ||||||||||||| || |||||| | ||| |||||||||| | ||| |||||||||||||||||||||||||||||| |||| ||||  |||||||||||    
T  4734076 ctgttgtgaattcggattcaaaatt-acaccaatacaaaccaatgatgtgtggagcaaaggaaagtagtaaccaatatcaaaatgaacacaagcaataat 4733978  T
Q  244 caacaataacagcacctagatc 265  Q
    ||||||||||| ||||||||||    
T  4733977 caacaataacaacacctagatc 4733956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 146 - 227
Target Start/End: Original strand, 12702431 - 12702511
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagt 227  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  12702431 tgttgtgaattcggactcaaaa-tcacatcaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 12702511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 145 - 269
Target Start/End: Complemental strand, 2628109 - 2627984
Alignment:
Q  145 ctgttgtgaattcaga-ctcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagc-aataa 242  Q
    ||||||||||||| || ||| |||| |||| ||||||||| || || ||||||||||||||||||||||||||| ||||||||||  ||||||| || ||    
T  2628109 ctgttgtgaattccgatctcgaaac-cacaccaatacaaagtaagatgtgtggagcaaaggaaagtagtaaccactaacaaagtgggtgcaagcaaaaaa 2628011  T
Q  243 tcaacaataacagcacctagatctaat 269  Q
    |||||||||||| ||||||||||||||    
T  2628010 tcaacaataacaacacctagatctaat 2627984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 6599333 - 6599215
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||  ||| |||    ||    
T  6599333 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtagagcaaaggaaagtagtaaccaatatcaaagtgaacacaaacaa----ca 6599239  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||||||||||||||    
T  6599238 ataataacaacacctagatctaat 6599215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 6674786 - 6674668
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||  ||| |||    ||    
T  6674786 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtagagcaaaggaaagtagtaaccaatatcaaagtgaacacaaacaa----ca 6674692  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||||||||||||||    
T  6674691 ataataacaacacctagatctaat 6674668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 146 - 242
Target Start/End: Original strand, 4743027 - 4743123
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataa 242  Q
    |||||||||||| |||||||| |||||| ||||||||||||| | ||||||||||||||||||| |||||||||| |||||| ||  ||||||||||    
T  4743027 tgttgtgaattcggactcaaatctcacaccaatacaaactataatgtgtggagcaaaggaaagtggtaaccaataccaaagtaaacacaagcaataa 4743123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 146 - 226
Target Start/End: Complemental strand, 5689635 - 5689556
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaag 226  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  5689635 tgttgtgaattccgactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaag 5689556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 3303474 - 3303549
Alignment:
Q  150 gtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaa 225  Q
    |||||||| |||||||| |||||| ||||||||||||||| ||||||||||||||||||| |||||||||| ||||    
T  3303474 gtgaattcggactcaaatctcacaccaatacaaactatgatgtgtggagcaaaggaaagtggtaaccaatatcaaa 3303549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 40321442 - 40321322
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||| ||||| |||||||||||||||  |||||||||||||||||||| || ||||| |||||| ||  ||||||| || ||    
T  40321442 tgttgtgaattccgactcaaaa-tcaca-caatacaaactatgatatgtggagcaaaggaaagtagcaatcaatatcaaagtaaacacaagcaacaa-ca 40321346  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||||||||||||||    
T  40321345 ataataacaacacctagatctaat 40321322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 43036791 - 43036669
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||| ||||||  ||||||||||||||| |||||||||  |||| |||||||||||||||||||||||||||||  |||||| ||  ||||||| || ||    
T  43036791 tgttatgaatttggactcaaaactcacaccaatacaaaaaatgatgtgtggagcaaaggaaagtagtaaccaatttcaaagtaaacacaagcaacaa-ca 43036693  T
Q  246 acaataacagcacctagatctaat 269  Q
    | || |||| ||||||||||||||    
T  43036692 ataacaacaccacctagatctaat 43036669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 19491503 - 19491624
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||||||  | ||||| ||||||||| |||||||||||||||||||| ||| ||||| |||||| ||  |||| || || ||    
T  19491503 tgttgtgaattcggactcaaaactctaaccaata-aaactatgatgtgtggagcaaaggaaagtattaatcaatatcaaagtaaacacaagtaacaa-ca 19491600  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||| |||||| |||||||    
T  19491601 acaataacaacacctatatctaat 19491624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 273
Target Start/End: Complemental strand, 10015444 - 10015317
Alignment:
Q  145 ctgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatc 244  Q
    ||||||||||||| || | |||||| ||| ||||  |||| | || |||||||||| ||||||||| ||||||||| |||||||||  ||||||| || |    
T  10015444 ctgttgtgaattcggatttaaaacttacaccaatgaaaacaaagatgtgtggagcagaggaaagtaataaccaatatcaaagtgaacacaagcaa-aaac 10015346  T
Q  245 aacaataacagcacctagatctaatttag 273  Q
    || |||||||  |||||||||||||||||    
T  10015345 aataataacaatacctagatctaatttag 10015317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 1345176 - 1345297
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| || |||||| |||||  ||||||||| || |  ||||||||||||||||||||||||||||| |||||| ||  ||| ||| || ||    
T  1345176 tgttgtgaattcggattcaaaa-tcacacaaatacaaacaataatctgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaaacaacaa-ca 1345273  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||| | ||||||||||||||    
T  1345274 ataataataacacctagatctaat 1345297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 1292317 - 1292390
Alignment:
Q  195 ggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaat 269  Q
    ||||||||| |||||||||| ||||| |||||| ||  |||| | ||| ||||||||||| ||||||||||||||    
T  1292317 ggagcaaagaaaagtagtaaacaatatcaaagtaaacacaagtagtaa-caacaataacaacacctagatctaat 1292390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 8965491 - 8965570
Alignment:
Q  145 ctgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagt 227  Q
    |||||||||||||  |||||||| ||||| ||||| ||||||||| | ||||||||| |||| ||||||||||||| ||||||    
T  8965491 ctgttgtgaattcgaactcaaaa-tcacaccaata-aaactatgatgcgtggagcaa-ggaacgtagtaaccaatatcaaagt 8965570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 227
Target Start/End: Complemental strand, 8154147 - 8154068
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagt 227  Q
    |||||||||||| | ||||||| |||||  |||| ||||||||| ||||| || ||||||||||||||| ||||| ||||||    
T  8154147 tgttgtgaattcgggctcaaaa-tcacactaata-aaactatgatgtgtgaagtaaaggaaagtagtaatcaatatcaaagt 8154068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 1746218 - 1746250
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  1746218 ttgttcacccagttcggtccaaacttgacctac 1746250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 17982822 - 17982790
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  17982822 ttgttcacccagttcggtccaaacttgacctac 17982790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 25690123 - 25690091
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  25690123 ttgttcacccagttcggtccaaacttgacctac 25690091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 31218426 - 31218394
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  31218426 ttgttcacccagttcggtccaaacttgacctac 31218394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 34254330 - 34254362
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  34254330 ttgttcacccagttcggtccaaacttgacctac 34254362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 34256506 - 34256538
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  34256506 ttgttcacccagttcggtccaaacttgacctac 34256538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 42498363 - 42498331
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  42498363 ttgttcacccagttcggtccaaacttgacctac 42498331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 1e-44; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 30682722 - 30682845
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||| | ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  |||||||||||||    
T  30682722 tgttgtgaatacggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatca 30682821  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||| ||||||||||||||    
T  30682822 acaataacaacacctagatctaat 30682845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 145 - 269
Target Start/End: Original strand, 39468347 - 39468471
Alignment:
Q  145 ctgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatc 244  Q
    |||||||||||||  |||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  ||| ||||||||    
T  39468347 ctgttgtgaattcgaactcaaaacttacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaaacaataatc 39468446  T
Q  245 aacaataacagcacctagatctaat 269  Q
    |||||||||||||||||||||||||    
T  39468447 aacaataacagcacctagatctaat 39468471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 170 - 269
Target Start/End: Original strand, 36073866 - 36073965
Alignment:
Q  170 cacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaat 269  Q
    |||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36073866 cacaccaatacaaactatgatgtgtggagcaaaggaaagtaataaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaat 36073965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 176 - 269
Target Start/End: Complemental strand, 13343399 - 13343306
Alignment:
Q  176 aatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaat 269  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  13343399 aatacgaactatgatgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacaacacctagatctaat 13343306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 30182934 - 30182834
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  30182934 tcacaccaaaacaaactatgatgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaaacaataatcaacaataacaacacctagatctaa 30182835  T
Q  269 t 269  Q
    |    
T  30182834 t 30182834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 16409825 - 16409725
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| ||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||| |||||||||||||    
T  16409825 tcacaccaatacaaagtatgatgtgtggagcaaaggaaagtagtaaccactaacaaagtgggtgcaagcaataatcaacaataacaacacctagatctaa 16409726  T
Q  269 t 269  Q
    |    
T  16409725 t 16409725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 160 - 269
Target Start/End: Original strand, 42428244 - 42428352
Alignment:
Q  160 actcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacc 259  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  ||||||| ||| || ||||||| ||||    
T  42428244 actcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaat-aataataacaacacc 42428342  T
Q  260 tagatctaat 269  Q
    ||||||||||    
T  42428343 tagatctaat 42428352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 42426035 - 42426157
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    ||||||||||||  ||||||||||||||  |||||||||||||| |||||||||||| ||||||||||||||||| |||||||||  |||||||  ||||    
T  42426035 tgttgtgaattcgaactcaaaactcacacaaatacaaactatgatgtgtggagcaaaagaaagtagtaaccaatatcaaagtgaacacaagcaa-catca 42426133  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||||||||||||||    
T  42426134 ataataacaacacctagatctaat 42426157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 145 - 269
Target Start/End: Original strand, 18441440 - 18441563
Alignment:
Q  145 ctgttgtgaattcaga-ctcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataat 243  Q
    ||||||||||||| || |||||||| |||| ||||||||| || || |||||||||||||||||||||||||||  |||||||||  |||||||||||||    
T  18441440 ctgttgtgaattccgatctcaaaac-cacaccaatacaaagtaagatgtgtggagcaaaggaaagtagtaaccaccaacaaagtgtgtgcaagcaataat 18441538  T
Q  244 caacaataacagcacctagatctaat 269  Q
    |||||| |||||||||||||||||||    
T  18441539 caacaa-aacagcacctagatctaat 18441563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 9789021 - 9789143
Alignment:
Q  146 tgttgtgaattcaga-ctcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatc 244  Q
    |||||||||||| || |||||||| |||| ||||||||| ||||| |||||||||||||||||||||||||||  |||||||||  ||||||||| ||||    
T  9789021 tgttgtgaattccgatctcaaaac-cacaccaatacaaagtatgatgtgtggagcaaaggaaagtagtaaccaccaacaaagtgtgtgcaagcaaaaatc 9789119  T
Q  245 aacaataacagcacctagatctaat 269  Q
    ||||| |||||||||||||||||||    
T  9789120 aacaa-aacagcacctagatctaat 9789143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 145 - 269
Target Start/End: Complemental strand, 33832047 - 33831925
Alignment:
Q  145 ctgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatc 244  Q
    ||||||||||||| ||||||||| | |||  |||||||||||||| |||||||||||||||||||||||||||| | |||||||||  |||||||||| |    
T  33832047 ctgttgtgaattcggactcaaaatt-acacaaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaaaatcaaagtgaacacaagcaataa-c 33831950  T
Q  245 aacaataacagcacctagatctaat 269  Q
    ||||||| ||||||||| |||||||    
T  33831949 aacaatagcagcacctaaatctaat 33831925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 5887235 - 5887356
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||| ||||| |||||||||||||||  ||||||||||||||||||||||||||||| |||||||||  ||||||| || ||    
T  5887235 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatatgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaa-ca 5887332  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| |||||| |||||||    
T  5887333 ataataacaacacctaaatctaat 5887356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 148 - 269
Target Start/End: Complemental strand, 538387 - 538267
Alignment:
Q  148 ttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaac 247  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||| ||||||||  |||||| ||  ||||||| || |||     
T  538387 ttgtgaattcagactcaaaactcacaccaatataaactatgatgtgtggagcaaaggaaagtaataaccaatttcaaagtaaacacaagcaacaa-caat 538289  T
Q  248 aataacagcacctagatctaat 269  Q
    ||||||| || |||||||||||    
T  538288 aataacaacatctagatctaat 538267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 26178255 - 26178132
Alignment:
Q  146 tgttgtgaattcaga-ctcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatc 244  Q
    |||||||||||| || |||||||| |||| |||||| || || || ||||||||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  26178255 tgttgtgaattccgatctcaaaac-cacaccaatacgaagtaagatgtgtggagcaaaggaaagtagtaaccactaacaaagtgtgtgcaagcaataatc 26178157  T
Q  245 aacaataacagcacctagatctaat 269  Q
    ||  |||||| ||||||||||||||    
T  26178156 aatgataacaacacctagatctaat 26178132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 28750455 - 28750577
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||  ||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||   ||||| ||  ||||||| || ||    
T  28750455 tgttgtgaatttggactcaaaactcacaccaatacaaattatgatgtgtggagcaaaggaaagtagtaaccaattttaaagtaaacacaagcaacaa-ca 28750553  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||||||||||||||    
T  28750554 ataataacaacacctagatctaat 28750577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 534127 - 534054
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaat 219  Q
    |||||||||||| ||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||    
T  534127 tgttgtgaattcggactcaaaactcacaccaatagaaactatgatgtgtggagcaaaggaaagtagtaaccaat 534054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 3075549 - 3075629
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaag 226  Q
    |||||||||||| |||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||| |||||    
T  3075549 tgttgtgaattcggactaaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtaataaccaatatcaaag 3075629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 25413106 - 25413006
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| |||||| |||||||| ||||||||||||||||| |||||| ||||| | ||||||   ||||||||||||||||||||||||||||| ||||||    
T  25413106 tcacaccaatacgaactatgatgtgtggagcaaaggaaattagtaatcaatatccaagtgagcacaagcaataatcaacaataacagcacctatatctaa 25413007  T
Q  269 t 269  Q
    |    
T  25413006 t 25413006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 13488569 - 13488447
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| |||||||| |||||| ||||||||| ||||| |||||||| ||||||||||| ||||||||  |||||||||  ||| |||| | ||    
T  13488569 tgttgtgaattcggactcaaatctcacaccaatacaaaatatgatgtgtggagtaaaggaaagtaataaccaatttcaaagtgaacacaatcaat-agca 13488471  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||||||||||||||    
T  13488470 ataataacaacacctagatctaat 13488447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 31183341 - 31183220
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||| ||||| |||||||||| |||| ||||||||||||||||||||||||| |||| ||||| |||  ||||||| ||  |    
T  31183341 tgttgtgaattcggactcaaaa-tcacaccaatacaaaccatgatgtgtggagcaaaggaaagtagtaactaatatcaaagggaacacaagcaacaa-aa 31183244  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| |||||| |||||||    
T  31183243 ataataacaacacctatatctaat 31183220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 8565748 - 8565872
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaata--at 243  Q
    |||||||||||  || |||||| |||||  |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||| |  |     
T  8565748 tgttgtgaatttggattcaaaa-tcacactaatataaactatgatgtgtggagcaaaggaaagtagtaaccaataacaaagtgaacacaagcaacaacaa 8565846  T
Q  244 caacaataacagcacctagatctaat 269  Q
     || ||||||| ||||||||||||||    
T  8565847 taataataacaacacctagatctaat 8565872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 147 - 269
Target Start/End: Complemental strand, 13240118 - 13239998
Alignment:
Q  147 gttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaa 246  Q
    |||||||||||  |||||||| |||||  |||||||||||||| |||||||| ||||||||||||||||||||   ||||| ||  ||||||| || |||    
T  13240118 gttgtgaattcgaactcaaaa-tcacactaatacaaactatgatgtgtggagtaaaggaaagtagtaaccaattttaaagtaaacacaagcaacaa-caa 13240021  T
Q  247 caataacagcacctagatctaat 269  Q
    |||||||| ||||||||||||||    
T  13240020 caataacaacacctagatctaat 13239998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 19806729 - 19806658
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaat 219  Q
    |||||||||||| ||||||||||||||  ||||||||||||||| |||||| ||||||||||||||||||||||    
T  19806729 tgttgtgaattcggactcaaaactcac--caatacaaactatgatgtgtggggcaaaggaaagtagtaaccaat 19806658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 269
Target Start/End: Complemental strand, 32637190 - 32637070
Alignment:
Q  148 ttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaac 247  Q
    |||||||||| || |||||||||||| ||||||||||||||| |||||||| |||||||||||||||| |||  || | | ||  |||||||  |||||     
T  32637190 ttgtgaattcggattcaaaactcacaccaatacaaactatgatgtgtggagtaaaggaaagtagtaacaaatttcacactaaacacaagcaa-catcaat 32637092  T
Q  248 aataacagcacctagatctaat 269  Q
    ||||||| ||||||||||||||    
T  32637091 aataacaacacctagatctaat 32637070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 161 - 269
Target Start/End: Complemental strand, 26171119 - 26171012
Alignment:
Q  161 ctcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacct 260  Q
    |||||||| |||| |||||| || || || |||||||||||||||||||||||| || ||||||||||  |||||||||||||| |  |||||| |||||    
T  26171119 ctcaaaac-cacaccaatacgaagtaagatgtgtggagcaaaggaaagtagtaagcactaacaaagtgtgtgcaagcaataatcgatgataacaacacct 26171021  T
Q  261 agatctaat 269  Q
    |||||||||    
T  26171020 agatctaat 26171012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 16649635 - 16649756
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    ||||||||||||  |||||||| ||| | ||||||||||||||| |||||||||||||||||||||||||||  | |||||||||  |||| | | | ||    
T  16649635 tgttgtgaattcgaactcaaaa-tcataccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccacaatcaaagtgaacacaagtagt-agca 16649732  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||||||||||||||    
T  16649733 ataataacaacacctagatctaat 16649756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 146 - 201
Target Start/End: Complemental strand, 40147610 - 40147555
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaa 201  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||    
T  40147610 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaa 40147555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 42927216 - 42927139
Alignment:
Q  191 gtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaat 269  Q
    ||||||||||||||||||||| ||| |||| |||||| ||  ||||||| || ||||||||||| ||||||||||||||    
T  42927216 gtgtggagcaaaggaaagtagcaactaatatcaaagtaaacacaagcaacaa-caacaataacaacacctagatctaat 42927139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 38747354 - 38747298
Alignment:
Q  145 ctgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaa 201  Q
    ||||||||||||  ||||||||  ||||| ||||||||||||||| |||||||||||    
T  38747354 ctgttgtgaatttggactcaaatttcacaccaatacaaactatgatgtgtggagcaa 38747298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 9789223 - 9789255
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  9789223 ttgttcacccagttcggtccaaacttgacctac 9789255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 10593427 - 10593395
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  10593427 ttgttcacccagttcggtccaaacttgacctac 10593395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 16409644 - 16409612
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  16409644 ttgttcacccagttcggtccaaacttgacctac 16409612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 18441647 - 18441679
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  18441647 ttgttcacccagttcggtccaaacttgacctac 18441679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 22536289 - 22536321
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  22536289 ttgttcacccagttcggtccaaacttgacctac 22536321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 25078290 - 25078258
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  25078290 ttgttcacccagttcggtccaaacttgacctac 25078258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 25136259 - 25136227
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  25136259 ttgttcacccagttcggtccaaacttgacctac 25136227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 26170931 - 26170899
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  26170931 ttgttcacccagttcggtccaaacttgacctac 26170899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 26178051 - 26178019
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  26178051 ttgttcacccagttcggtccaaacttgacctac 26178019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 29720533 - 29720501
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  29720533 ttgttcacccagttcggtccaaacttgacctac 29720501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 29751159 - 29751191
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  29751159 ttgttcacccagttcggtccaaacttgacctac 29751191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 37439310 - 37439278
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  37439310 ttgttcacccagttcggtccaaacttgacctac 37439278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 269
Target Start/End: Complemental strand, 37439474 - 37439388
Alignment:
Q  181 aaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaat 269  Q
    ||||||||| |||||||||||| | ||||||||||||||  |||||| ||  ||||||| || ||| ||||||| ||||||| ||||||    
T  37439474 aaactatgatgtgtggagcaaaag-aagtagtaaccaatttcaaagtaaacacaagcaacaa-caataataacaacacctaggtctaat 37439388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 40380260 - 40380228
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  40380260 ttgttcacccagttcggtccaaacttgacctac 40380228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 40382471 - 40382439
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  40382471 ttgttcacccagttcggtccaaacttgacctac 40382439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 8e-43; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 5257966 - 5258066
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5257966 tcacaccaatacgaactatgatgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 5258065  T
Q  269 t 269  Q
    |    
T  5258066 t 5258066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 29813430 - 29813307
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||| |||| |||||||||  ||| |||||||||    
T  29813430 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaagaaaagtagtaactaatatcaaagtgaacacaaacaataatca 29813331  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||||||||||||||||||    
T  29813330 acaataacagcacctagatctaat 29813307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 175 - 273
Target Start/End: Original strand, 5260151 - 5260249
Alignment:
Q  175 caatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaatttag 273  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  5260151 caatacgaactatgatgtgtggagcaaaggaaagtagtaaccaataacaaagtgagtgcaagcaataatcaacaataacaacacctagatctaatttag 5260249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 146 - 273
Target Start/End: Complemental strand, 7762635 - 7762508
Alignment:
Q  146 tgttgtgaattcag-actcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatc 244  Q
    |||||| ||||||| |||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  |||| |||||||    
T  7762635 tgttgtcaattcaggactcaaaact-acaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagtaataatc 7762537  T
Q  245 aacaataacagcacctagatctaatttag 273  Q
    |||||||||| ||||||||||||||||||    
T  7762536 aacaataacaacacctagatctaatttag 7762508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 9635946 - 9636046
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||    
T  9635946 tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataacagcacctagatctaa 9636045  T
Q  269 t 269  Q
    |    
T  9636046 t 9636046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 165 - 269
Target Start/End: Original strand, 19683706 - 19683810
Alignment:
Q  165 aaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagat 264  Q
    ||||||||| ||||||||||||||| || ||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||    
T  19683706 aaactcacaccaatacaaactatgatgtttggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataacagcacctagat 19683805  T
Q  265 ctaat 269  Q
    |||||    
T  19683806 ctaat 19683810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 29811237 - 29811114
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    ||||||||||||  |||||||||||||| ||||||||| |||||  ||||||||||||||||||||||||||||  ||||| |||  |||||||||||||    
T  29811237 tgttgtgaattcgaactcaaaactcacaccaatacaaaatatgatttgtggagcaaaggaaagtagtaaccaatttcaaagagaacacaagcaataatca 29811138  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||||||||||||||||||    
T  29811137 acaataacagcacctagatctaat 29811114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 7764834 - 7764711
Alignment:
Q  146 tgttgtgaattcag-actcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatc 244  Q
    |||||||||||| | |||||||||| ||| ||||||||||||||| ||||| || ||||||||||||||||||||| |||||||||  ||||||||||||    
T  7764834 tgttgtgaattccggactcaaaact-acaccaatacaaactatgatgtgtgaagtaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatc 7764736  T
Q  245 aacaataacagcacctagatctaat 269  Q
    |||||||||||||||||||||||||    
T  7764735 aacaataacagcacctagatctaat 7764711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 40734865 - 40734743
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| | ||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  |||| |||||| |    
T  40734865 tgttgtgaattcggtctcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagaaataataa 40734767  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||||||||||||||||||    
T  40734766 aaaataacagcacctagatctaat 40734743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 40735750 - 40735628
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| |  |||||| ||||| ||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||  ||| |||||||||    
T  40735750 tgttgtgaattcggtatcaaaa-tcacaccaatacaaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaaacaataatca 40735652  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||||||||||||||||||    
T  40735651 acaataacagcacctagatctaat 40735628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 145 - 269
Target Start/End: Original strand, 9634620 - 9634743
Alignment:
Q  145 ctgttgtgaattcaga-ctcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataat 243  Q
    ||||||||||||| |  ||||||| ||||| |||||||||||||||  ||||||||||||||||||||||||||||| |||||||||  |||||||||||    
T  9634620 ctgttgtgaattccggtctcaaaa-tcacaccaatacaaactatgat-tgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataat 9634717  T
Q  244 caacaataacagcacctagatctaat 269  Q
    ||||||||||||||||||||||||||    
T  9634718 caacaataacagcacctagatctaat 9634743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 761211 - 761091
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||  ||||| ||||||||||||||| |||||||||||||||||||||||||||| | |||||||||  |||||||||| ||    
T  761211 tgttgtgaattcggactcaaa--tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaaaatcaaagtgaactcaagcaataa-ca 761115  T
Q  246 acaataacagcacctagatctaat 269  Q
    |||||| |||||||||||||||||    
T  761114 acaatagcagcacctagatctaat 761091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 9581652 - 9581529
Alignment:
Q  146 tgttgtgaattcag-actcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatc 244  Q
    |||||||||||| | |||||||| ||||| ||||| ||||||||| ||||| |||||||||||||||||||||||| ||||||||   ||||||||||||    
T  9581652 tgttgtgaattccggactcaaaa-tcacaccaatataaactatgatgtgtgaagcaaaggaaagtagtaaccaatatcaaagtgagcacaagcaataatc 9581554  T
Q  245 aacaataacagcacctagatctaat 269  Q
    |||||||||||||||||||||||||    
T  9581553 aacaataacagcacctagatctaat 9581529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 145 - 269
Target Start/End: Complemental strand, 37408828 - 37408705
Alignment:
Q  145 ctgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatc 244  Q
    ||||||||||||| | ||||||  ||||||||||||||| ||||| ||||||||||||||||||||||||||||||  |||||||   ||| ||||||||    
T  37408828 ctgttgtgaattcggcctcaaag-tcacatcaatacaaaatatgatgtgtggagcaaaggaaagtagtaaccaatattaaagtgagcacaaacaataatc 37408730  T
Q  245 aacaataacagcacctagatctaat 269  Q
    |||||||||||||||||||||||||    
T  37408729 aacaataacagcacctagatctaat 37408705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 45095509 - 45095409
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||   |||||||||||||||||||||||||| |||||||||    
T  45095509 tcacatcaatacaaactatgatgtgtagagcaaaggaaagtagtaaccaatatcaaagtgagcacaagcaataatcaacaataacagcacatagatctaa 45095410  T
Q  269 t 269  Q
    |    
T  45095409 t 45095409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 5236257 - 5236379
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||| |||||||| | ||||||||||||| | ||| |||||||||  |||||||||||||    
T  5236257 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagtacaggaaagtagtaatcgatatcaaagtgaacacaagcaataatca 5236355  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||| ||| ||||||||||||    
T  5236356 acaataagagctcctagatctaat 5236379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 22834807 - 22834928
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||  || | ||||| ||    
T  22834807 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaggtaataa-ca 22834904  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||| ||||||||||||||    
T  22834905 acaataacaacacctagatctaat 22834928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 170 - 269
Target Start/End: Original strand, 23199960 - 23200058
Alignment:
Q  170 cacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaat 269  Q
    |||| ||||||||| |||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||    
T  23199960 cacaccaatacaaagtatgatatgtggagcaaaggaaagtagtaaccaataacaaagtgagtgcaagcaataatcaacaataa-aacacctagatctaat 23200058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 51399182 - 51399060
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||| ||| | ||||||||||||||| || |||||||||||||||||| || ||||| ||||||||   | |||||||||||    
T  51399182 tgttgtgaattcggactcaaaa-tcataccaatacaaactatgatgtatggagcaaaggaaagtagaaaacaatatcaaagtgagcactagcaataatca 51399084  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||||||||||||||||||    
T  51399083 acaataacagcacctagatctaat 51399060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 145 - 268
Target Start/End: Complemental strand, 29682727 - 29682604
Alignment:
Q  145 ctgttgtgaattcagactcaaaac-tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataat 243  Q
    ||||||||||||| ||| |||||  ||||| ||||||||||||||| |||||||||||||||||||||||| ||| |  ||||||||| ||||||||||     
T  29682727 ctgttgtgaattccgacacaaaaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaatcaaaattaaagtgaatacaagcaataa- 29682629  T
Q  244 caacaataacagcacctagatctaa 268  Q
    |||||||| ||||||||||||||||    
T  29682628 caacaatagcagcacctagatctaa 29682604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 29196189 - 29196269
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaag 226  Q
    |||||||||||| |||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  29196189 tgttgtgaattcggactcaaatctcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaag 29196269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 23391712 - 23391834
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    ||||||||||||  || ||||||||||| ||||||||||||||| |||||||| ||||||||||| ||||||||| |||||||||  |||| || || ||    
T  23391712 tgttgtgaattcgaacacaaaactcacaccaatacaaactatgatgtgtggagaaaaggaaagtaataaccaatatcaaagtgaacacaagaaacaa-ca 23391810  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||||||||||||||    
T  23391811 ataataacaacacctagatctaat 23391834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 23410131 - 23410253
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||  ||| |||||||||  ||||||| ||  |    
T  23410131 tgttgtgaattcggacacaaaactcacatcaatacaaactatgatgtgtggatcaaaggaaagtagtaacatatatcaaagtgaacacaagcaacaa-aa 23410229  T
Q  246 acaataacagcacctagatctaat 269  Q
    | | ||||| ||||||||||||||    
T  23410230 atattaacaacacctagatctaat 23410253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 801463 - 801335
Alignment:
Q  146 tgttgtgaattcaga-ctcaaaac---tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaata 241  Q
    |||||||||||| || ||||||||   ||||| |||||| || ||||| ||||||||||||||||||||||||||| ||| ||||||  |||||||||||    
T  801463 tgttgtgaattccgatctcaaaacgtgtcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaaccactaataaagtgtgtgcaagcaata 801364  T
Q  242 atcaac-aataacagcacctagatctaat 269  Q
    |||||| || |||||||||||||||||||    
T  801363 atcaacaaaaaacagcacctagatctaat 801335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 39153164 - 39153237
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaat 219  Q
    ||||| |||||| | ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  39153164 tgttgagaattcgggctcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaat 39153237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 9666270 - 9666349
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaag 226  Q
    |||||||||||| ||||||||| ||||| |||||||||||||||  ||||||||||||||||||||||||||||| |||||    
T  9666270 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatctgtggagcaaaggaaagtagtaaccaatatcaaag 9666349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 170 - 269
Target Start/End: Original strand, 7779824 - 7779923
Alignment:
Q  170 cacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaat 269  Q
    |||| |||||| || || || ||||||||||||||| ||| |||||||  |||||||||  ||||||||||||||||||| |||||||||||||||||||    
T  7779824 cacaccaatacgaagtaagatgtgtggagcaaaggagagtggtaaccaccaacaaagtgtgtgcaagcaataatcaacaaaaacagcacctagatctaat 7779923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 44700284 - 44700405
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||| ||||||| ||||||||| ||||| ||||||||||||||| |  |||||||||| |||||||||||||||| |||||| ||  ||||||| || ||    
T  44700284 tgttttgaattcggactcaaaa-tcacaccaatacaaactatgatgcatggagcaaagaaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 44700381  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||||||||||||||    
T  44700382 ataataacaacacctagatctaat 44700405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 16499369 - 16499287
Alignment:
Q  159 gactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataa 242  Q
    ||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| | |||||| ||  ||||||||||    
T  16499369 gactcaaaa-tcacatcaatacaaactataatgtgtggagcaaaggaaagtagtaaccaacatcaaagtaaacacaagcaataa 16499287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 146 - 227
Target Start/End: Original strand, 27305519 - 27305597
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagt 227  Q
    |||||||||||| ||||||||| ||||| |||||  |||||||| |||||||||||||||||||||||||||||| ||||||    
T  27305519 tgttgtgaattcggactcaaaa-tcacaccaata--aactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 27305597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 146 - 220
Target Start/End: Complemental strand, 32891458 - 32891385
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaata 220  Q
    |||||||| ||| ||||||||||||||| ||||  ||||||||| ||||||||||||||||||||||||||||||    
T  32891458 tgttgtgacttcggactcaaaactcacaccaatg-aaactatgatgtgtggagcaaaggaaagtagtaaccaata 32891385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 225
Target Start/End: Original strand, 2074882 - 2074960
Alignment:
Q  145 ctgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaa 225  Q
    ||||||||||||| ||| ||||| ||||| ||||| ||||||||| |||||||||||||||||||||||||||||| ||||    
T  2074882 ctgttgtgaattcggacccaaaa-tcacaccaata-aaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaa 2074960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 146 - 227
Target Start/End: Original strand, 51351941 - 51352020
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagt 227  Q
    |||||||||||| ||||||||| ||||||||||| | |||| || ||||||||||||||||||| |||||||||| ||||||    
T  51351941 tgttgtgaattcggactcaaaa-tcacatcaata-atactacgatgtgtggagcaaaggaaagtggtaaccaatatcaaagt 51352020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 269
Target Start/End: Original strand, 23197767 - 23197859
Alignment:
Q  170 cacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaat 269  Q
    |||| ||||||||| |||||  |||||||||||||||||||||||||||||| |||      ||||||||||||||||||||| | ||| ||||||||||    
T  23197767 cacaccaatacaaagtatgatatgtggagcaaaggaaagtagtaaccaataataaa------gcaagcaataatcaacaataa-aacacatagatctaat 23197859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 269
Target Start/End: Original strand, 21350810 - 21350929
Alignment:
Q  145 ctgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatc 244  Q
    ||||||||||||| ||||||||||||||| ||||  |||  | || ||||| |||||||||||||||||||||||| |||||| ||  ||| |||    |    
T  21350810 ctgttgtgaattcggactcaaaactcacaccaatg-aaataaagatgtgtgaagcaaaggaaagtagtaaccaatatcaaagtaaacacaaacaa----c 21350904  T
Q  245 aacaataacagcacctagatctaat 269  Q
    |||||||||| ||| ||||||||||    
T  21350905 aacaataacaacacttagatctaat 21350929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 261
Target Start/End: Complemental strand, 31314808 - 31314695
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||| | ||||||||| ||||| ||||||||||||||| || ||||||||||||||||| |||| ||||  ||||| ||  ||||||| || ||    
T  31314808 tgttgtgaataccgactcaaaa-tcacaccaatacaaactatgatgtatggagcaaaggaaagtaataactaatattaaagtaaacacaagcaacaa-ca 31314711  T
Q  246 acaataacagcaccta 261  Q
    | ||||||| ||||||    
T  31314710 ataataacaacaccta 31314695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 146 - 220
Target Start/End: Complemental strand, 37407057 - 37406984
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaata 220  Q
    |||||||||||| | ||||||  ||||| || |||||| ||||| ||||||||||||||||||||||||||||||    
T  37407057 tgttgtgaattcggcctcaaag-tcacaccactacaaaatatgatgtgtggagcaaaggaaagtagtaaccaata 37406984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 189
Target Start/End: Original strand, 4160059 - 4160102
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatga 189  Q
    |||||||||||| ||||||||||||||| |||||||||||||||    
T  4160059 tgttgtgaattcggactcaaaactcacaccaatacaaactatga 4160102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 45283155 - 45283123
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||||||||||||||||||||||||||||    
T  45283155 ttgttcactcagttcggtccaaacttgacctac 45283123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 801261 - 801229
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  801261 ttgttcacccagttcggtccaaacttgacctac 801229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 3617619 - 3617587
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  3617619 ttgttcacccagttcggtccaaacttgacctac 3617587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 6095390 - 6095446
Alignment:
Q  146 tgttgtgaattcag-actcaaaactcacatcaatacaaactatgacgtgtggagcaa 201  Q
    |||||||||||| | |||||||  ||||| ||||||||||||||| |||||||||||    
T  6095390 tgttgtgaattcgggactcaaatttcacaccaatacaaactatgatgtgtggagcaa 6095446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 6716668 - 6716636
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  6716668 ttgttcacccagttcggtccaaacttgacctac 6716636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 7762434 - 7762402
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  7762434 ttgttcacccagttcggtccaaacttgacctac 7762402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 9581451 - 9581419
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  9581451 ttgttcacccagttcggtccaaacttgacctac 9581419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 19683888 - 19683920
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  19683888 ttgttcacccagttcggtccaaacttgacctac 19683920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 23197938 - 23197970
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  23197938 ttgttcacccagttcggtccaaacttgacctac 23197970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 23200137 - 23200169
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  23200137 ttgttcacccagttcggtccaaacttgacctac 23200169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 45095332 - 45095300
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  45095332 ttgttcacccagttcggtccaaacttgacctac 45095300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 54635293 - 54635261
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  54635293 ttgttcacccagttcggtccaaacttgacctac 54635261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 2e-40; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 4502955 - 4503055
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| ||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4502955 tcacaccaatacaaactataatgtgtggagtaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 4503054  T
Q  269 t 269  Q
    |    
T  4503055 t 4503055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 17057169 - 17057291
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||| ||||| ||||||||| ||||| |||| ||||||||||||||||||||||||| |||||||||  |||||||||||||    
T  17057169 tgttgtgaattcggactcaaaa-tcacaccaatacaaaatatgatgtgtagagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatca 17057267  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||||||||||||||||||    
T  17057268 acaataacagcacctagatctaat 17057291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 17085152 - 17085274
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||| ||||| ||||||||| ||||| |||| ||||||||||||||||||||||||| |||||||||  |||||||||||||    
T  17085152 tgttgtgaattcggactcaaaa-tcacaccaatacaaaatatgatgtgtagagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatca 17085250  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||||||||||||||||||    
T  17085251 acaataacagcacctagatctaat 17085274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 176 - 269
Target Start/End: Original strand, 36205494 - 36205587
Alignment:
Q  176 aatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaat 269  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  36205494 aatacaaactatgatgtgtggagcaaaggaaagtagtaaccaataacaaagtgaacacaagcaataatcaacaataacagcacctagatctaat 36205587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 6594804 - 6594926
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||  ||||||||| ||||| ||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||  |||| ||||||||    
T  6594804 tgttgtgaatttggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaagtaaagtagtaaccaatatcaaagtgaacacaagtaataatca 6594902  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||||||||||||||||||    
T  6594903 acaataacagcacctagatctaat 6594926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 36987875 - 36987997
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||  |||||| ||  |||||||||||||    
T  36987875 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatttcaaagtaaacacaagcaataatca 36987973  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||| ||||||||||||||    
T  36987974 acaataacaacacctagatctaat 36987997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 4484150 - 4484250
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| |||||| || ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  4484150 tcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaaccaataacaaagtgagtgcaagcaataatcaacaataacaacacctagatctaa 4484249  T
Q  269 t 269  Q
    |    
T  4484250 t 4484250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 145 - 269
Target Start/End: Complemental strand, 32289938 - 32289814
Alignment:
Q  145 ctgttgtgaattcaga-ctcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataat 243  Q
    ||||||||||||| || |||||||| |||| ||||||||| || || ||||||||||||||||||||||||||| ||||||||||  |||||||||||||    
T  32289938 ctgttgtgaattccgatctcaaaac-cacaccaatacaaagtaagatgtgtggagcaaaggaaagtagtaaccactaacaaagtgggtgcaagcaataat 32289840  T
Q  244 caacaataacagcacctagatctaat 269  Q
    ||||||||||| ||||||||||||||    
T  32289839 caacaataacaacacctagatctaat 32289814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 45100100 - 45100000
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| |||||| || ||||| |||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||    
T  45100100 tcacaccaatacgaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataacagcacctagatctaa 45100001  T
Q  269 t 269  Q
    |    
T  45100000 t 45100000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 154 - 269
Target Start/End: Complemental strand, 38312600 - 38312486
Alignment:
Q  154 attcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataac 253  Q
    |||| ||||||||| ||||| ||||| |||| |||| |||||||||||||||||||||||||||||| |||||||||  ||||||| |||||||||||||    
T  38312600 attcggactcaaaa-tcacaccaatataaacaatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaatcaacaataac 38312502  T
Q  254 agcacctagatctaat 269  Q
    ||||||||||||||||    
T  38312501 agcacctagatctaat 38312486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 723547 - 723668
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  ||| ||| || ||    
T  723547 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaatcaacaa-ca 723644  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||||||||||||||    
T  723645 ataataacaacacctagatctaat 723668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 14633628 - 14633749
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||| ||||||||||||| ||||| ||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||  ||||||| || ||    
T  14633628 tgttgtgatttcagactcaaaa-tcacaccaatacaaactatgatgtgtgaagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaa-ca 14633725  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||||||||||||||    
T  14633726 ataataacaacacctagatctaat 14633749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 34139573 - 34139694
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  ||||||| || ||    
T  34139573 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaa-ca 34139670  T
Q  246 acaataacagcacctagatctaat 269  Q
    | |||||||  |||||||||||||    
T  34139671 ataataacaagacctagatctaat 34139694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 42362713 - 42362592
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||| | |||||||||  ||||||| || ||    
T  42362713 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaaaatcaaagtgaactcaagcaacaa-ca 42362616  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||||||||||||||    
T  42362615 ataataacaacacctagatctaat 42362592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 163 - 269
Target Start/End: Original strand, 5723072 - 5723178
Alignment:
Q  163 caaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctag 262  Q
    ||||| ||||| ||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||   ||| |||||||||||||||||| |||||||    
T  5723072 caaaaatcacaccaatacaaactatgatgtgtggagcaaagtaaagtagtaaccaatatcaaagtgagcacaaacaataatcaacaataacaacacctag 5723171  T
Q  263 atctaat 269  Q
    |||||||    
T  5723172 atctaat 5723178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 145 - 269
Target Start/End: Original strand, 2334217 - 2334339
Alignment:
Q  145 ctgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatc 244  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||| ||||| |||||||||||||||||||||||  |||||| ||  ||||||| || |    
T  2334217 ctgttgtgaattcagactcaaaa-tcacaccaatacaaactatgatgtgtgaagcaaaggaaagtagtaaccaatttcaaagtaaacacaagcaacaa-c 2334314  T
Q  245 aacaataacagcacctagatctaat 269  Q
    || ||||||| ||||||||||||||    
T  2334315 aataataacaacacctagatctaat 2334339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 146 - 242
Target Start/End: Complemental strand, 11690856 - 11690761
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataa 242  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||| | |||||||  ||||||||||    
T  11690856 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaactaatatc-aagtgaacacaagcaataa 11690761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 30833694 - 30833594
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| |||||| || ||||| ||||||||||||||||||||||||||| |||  | |||| |||||||||||||||||||||||| |||||||||||||    
T  30833694 tcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaaccattaattatgtgagtgcaagcaataatcaacaataacaacacctagatctaa 30833595  T
Q  269 t 269  Q
    |    
T  30833594 t 30833594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 33162254 - 33162333
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaag 226  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  33162254 tgttgtgaattcggactcaaaa-tcacatcaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaag 33162333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 145 - 269
Target Start/End: Original strand, 11151394 - 11151517
Alignment:
Q  145 ctgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatc 244  Q
    |||||||||||||  |||||||||||| | ||||||||||||||| ||||||||||||  |||||||||| ||||| |||||||||  ||||||| || |    
T  11151394 ctgttgtgaattcgaactcaaaactcataccaatacaaactatgatgtgtggagcaaataaaagtagtaatcaatatcaaagtgaacacaagcaacaa-c 11151492  T
Q  245 aacaataacagcacctagatctaat 269  Q
    || ||||||| || |||||||||||    
T  11151493 aataataacaacagctagatctaat 11151517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 24885953 - 24885832
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||| ||||| ||||||||||| |||||||||||| |||||||||  |||| || || ||    
T  24885953 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtgtagcaaaggaaaatagtaaccaatatcaaagtgaacacaagaaacaa-ca 24885856  T
Q  246 acaataacagcacctagatctaat 269  Q
    |  |||||| ||||||||||||||    
T  24885855 atgataacaacacctagatctaat 24885832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 148 - 269
Target Start/End: Complemental strand, 11067667 - 11067547
Alignment:
Q  148 ttgtgaattcagactcaaaactcacatcaa-tacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaa 246  Q
    |||||||||||| ||||||| | ||| ||| | |||||||||| |||||||||||||||||||||||||||||| |||||||||  ||||||| || |||    
T  11067667 ttgtgaattcagcctcaaaatt-acaccaaattcaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaa-caa 11067570  T
Q  247 caataacagcacctagatctaat 269  Q
     ||||||| ||||||||||||||    
T  11067569 taataacaacacctagatctaat 11067547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 14202224 - 14202345
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| || |||||| ||| | ||| |||||||||||  ||||||| ||||||||||||||| ||||| ||||||||| |||||||| || ||    
T  14202224 tgttgtgaattcggagtcaaaa-tcataccaacacaaactatgatatgtggagtaaaggaaagtagtaatcaatatcaaagtgaacgcaagcaacaa-ca 14202321  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||||||||||||||    
T  14202322 ataataacaacacctagatctaat 14202345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 29868237 - 29868115
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||  ||||| ||||||||||||||| ||||||||||||| |||||||||| ||||   ||||| ||  ||||||| || ||    
T  29868237 tgttgtgaattcggactcaaatttcacagcaatacaaactatgatgtgtggagcaaagaaaagtagtaatcaattttaaagtaaacacaagcaacaa-ca 29868139  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||||||||||||||    
T  29868138 ataataacaacacctagatctaat 29868115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 39285202 - 39285081
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| |||| |||||||| | |||||||| |||||| ||||||||||||| |||||||||||||||  |||||| ||  ||||||| || ||    
T  39285202 tgttgtgaattcggacttaaaactcataccaatacaa-ctatgatgtgtggagcaaagaaaagtagtaaccaatttcaaagtaaacacaagcaacaa-ca 39285105  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||||||||||||||    
T  39285104 ataataacaacacctagatctaat 39285081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 146 - 226
Target Start/End: Complemental strand, 36773926 - 36773847
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaag 226  Q
    |||||||||||| || |||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||| |||||    
T  36773926 tgttgtgaattcggattcaaaa-tcacaccaatacaaactatgatgtgtggagcaaatgaaagtagtaaccaatatcaaag 36773847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 36317813 - 36317935
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||  ||||||||||||||| |||||||||| |||| |||| || |||| ||||||||||||||||  |||||| ||  |||||||  | ||    
T  36317813 tgttgtgaatttggactcaaaactcacaccaatacaaacaatgatgtgtagaacaaatgaaagtagtaaccaatttcaaagtaaacacaagcaa-cagca 36317911  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||||||||| ||||    
T  36317912 ataataacaacacctagatttaat 36317935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 2838313 - 2838192
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||| ||| ||| ||||||||||| ||||| | ||| ||| |||||||| |||||||||||||||||| || |||||| ||  ||| ||| || ||    
T  2838313 tgttgtgagttcggacacaaaactcacaccaata-atactttgatgtgtggagtaaaggaaagtagtaaccactatcaaagtaaacacaaacaacaa-ca 2838216  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||| ||||||||| ||||    
T  2838215 acaataacaacacctagatataat 2838192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 146 - 227
Target Start/End: Complemental strand, 41455278 - 41455199
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagt 227  Q
    |||||||||||||||||||||||||||| ||||  |||||  ||| ||||||||||| | ||||||||||| ||| ||||||    
T  41455278 tgttgtgaattcagactcaaaactcacaacaat--aaacttagacatgtggagcaaaaggaagtagtaaccgatatcaaagt 41455199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 217
Target Start/End: Complemental strand, 41446501 - 41446431
Alignment:
Q  145 ctgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaacca 217  Q
    ||||||||||||||||||||||||||||| |||||  ||||   | |||||||||||| ||||||||||||||    
T  41446501 ctgttgtgaattcagactcaaaactcacaacaata--aacttaaatgtgtggagcaaaagaaagtagtaacca 41446431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 269
Target Start/End: Complemental strand, 6267028 - 6266940
Alignment:
Q  181 aaactatgacgtgtggagcaaaggaaagtagtaacca-ataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaat 269  Q
    ||||||||| ||||||||||||||| ||| |||||||   |||||||||  || |||||| ||||||||| |||| ||||||||||||||    
T  6267028 aaactatgatgtgtggagcaaaggagagtggtaaccaccaaacaaagtgtgtgtaagcaaaaatcaacaa-aacaacacctagatctaat 6266940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 227
Target Start/End: Complemental strand, 11049912 - 11049833
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagt 227  Q
    |||||||| ||| ||| ||||| ||||| ||||| ||||||||| | |||||||||| ||||||||||||||||| ||||||    
T  11049912 tgttgtgagttcggacgcaaaa-tcacaccaata-aaactatgatgcgtggagcaaaagaaagtagtaaccaatatcaaagt 11049833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 6595005 - 6595037
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||||||||||||||||||||||||||||    
T  6595005 ttgttcactcagttcggtccaaacttgacctac 6595037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 12123436 - 12123472
Alignment:
Q  191 gtgtggagcaaaggaaagtagtaaccaataacaaagt 227  Q
    |||||||||||||||||||||||||||||| ||||||    
T  12123436 gtgtggagcaaaggaaagtagtaaccaatatcaaagt 12123472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 45727305 - 45727249
Alignment:
Q  147 gttgtgaattcagactcaaaactcacatcaatacaaac--tatgacgtgtggagcaa 201  Q
    ||||||||||||||||||||  ||||| ||||||||||  ||||| |||||||||||    
T  45727305 gttgtgaattcagactcaaatttcacaccaatacaaactatatgatgtgtggagcaa 45727249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 4503132 - 4503164
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  4503132 ttgttcacccagttcggtccaaacttgacctac 4503164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 6266860 - 6266828
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  6266860 ttgttcacccagttcggtccaaacttgacctac 6266828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 12647385 - 12647417
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  12647385 ttgttcacccagttcggtccaaacttgacctac 12647417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 32289733 - 32289701
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  32289733 ttgttcacccagttcggtccaaacttgacctac 32289701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 36205664 - 36205696
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  36205664 ttgttcacccagttcggtccaaacttgacctac 36205696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 36988075 - 36988107
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  36988075 ttgttcacccagttcggtccaaacttgacctac 36988107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 45099923 - 45099891
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  45099923 ttgttcacccagttcggtccaaacttgacctac 45099891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 1e-38; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 145 - 269
Target Start/End: Original strand, 30834332 - 30834456
Alignment:
Q  145 ctgttgtgaatt-cagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataat 243  Q
    |||||||||||| | | ||||||| ||||| |||||| || ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30834332 ctgttgtgaatttcggtctcaaaa-tcacaccaatacgaaatatgatgtgtggagcaaaggaaaatagtaaccaataacaaagtgaatgcaagcaataat 30834430  T
Q  244 caacaataacagcacctagatctaat 269  Q
    ||||||||||||||||||||||||||    
T  30834431 caacaataacagcacctagatctaat 30834456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 16452127 - 16452250
Alignment:
Q  146 tgttgtgaattcaga-ctcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatc 244  Q
    |||||||||||| || ||||||| ||||| |||||| |||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  16452127 tgttgtgaattccgatctcaaaa-tcacaccaatacgaactatgatgtgtggagtaaaggaaagtagtaaccaataacaaagtgaatacaagcaataatc 16452225  T
Q  245 aacaataacagcacctagatctaat 269  Q
    |||||||||| ||||||||||||||    
T  16452226 aacaataacatcacctagatctaat 16452250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 2171349 - 2171449
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| |||||| |||||||| ||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  2171349 tcacaccaatacgaactatgatgtgtggagcaaaggaaagtagtaaccactaacaaagtgtgtgcaagcaataatcaacaataacagcacctagatctaa 2171448  T
Q  269 t 269  Q
    |    
T  2171449 t 2171449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 175 - 269
Target Start/End: Original strand, 9182859 - 9182953
Alignment:
Q  175 caatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaat 269  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||| ||||||||||||||    
T  9182859 caatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataacaacacctagatctaat 9182953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 5408892 - 5408992
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||   |||||||||||||||||||||| |||||||||||||    
T  5408892 tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgagcacaagcaataatcaacaataacaacacctagatctaa 5408991  T
Q  269 t 269  Q
    |    
T  5408992 t 5408992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 5413217 - 5413317
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||   |||||||||||||||||||||| |||||||||||||    
T  5413217 tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgagcacaagcaataatcaacaataacaacacctagatctaa 5413316  T
Q  269 t 269  Q
    |    
T  5413317 t 5413317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 28137211 - 28137332
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| | ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||  |||||||||| |     
T  28137211 tgttgtgaattcggtctcaaaa-tcacaccaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaataa-cg 28137308  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||| ||| ||||||||||    
T  28137309 acaataacaacacatagatctaat 28137332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 26954091 - 26954212
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||  |||||| ||   ||| ||||| ||    
T  26954091 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaagaaagtagtaaccaatttcaaagtaaacataagaaataa-ca 26954188  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||||||||||||||||||    
T  26954189 acaataacagcacctagatctaat 26954212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 175 - 269
Target Start/End: Original strand, 31404503 - 31404597
Alignment:
Q  175 caatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaat 269  Q
    |||||| |||||||| ||||||||||||||||| |||||| ||||| ||||||||   |||||||||||||||||||||||||||||||||||||    
T  31404503 caatacgaactatgatgtgtggagcaaaggaaaatagtaatcaatatcaaagtgagcacaagcaataatcaacaataacagcacctagatctaat 31404597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 3072579 - 3072679
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| |||||| || ||||| ||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||| || ||||| |||||||||    
T  3072579 tcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaaccactaacaaagtgtgtgcaagcaataatcaacaaaaatagcacatagatctaa 3072678  T
Q  269 t 269  Q
    |    
T  3072679 t 3072679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 16569389 - 16569266
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaataca-aactatgacgtgtggagcaaa-ggaaagtagtaaccaataacaaagtgaatgcaagcaataat 243  Q
    |||||||||||| ||||||||| ||||| |||||   |||||||| |||||||||||| |||||||||||||||| | |||||||||  ||||||||||     
T  16569389 tgttgtgaattcggactcaaaa-tcacaccaatattcaactatgatgtgtggagcaaaaggaaagtagtaaccaaaatcaaagtgaactcaagcaataa- 16569292  T
Q  244 caacaataacagcacctagatctaat 269  Q
    |||||||| |||||||||||||||||    
T  16569291 caacaatagcagcacctagatctaat 16569266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 6097286 - 6097369
Alignment:
Q  186 atgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaat 269  Q
    |||| ||||||||||| ||||||||||||||| ||||||||||  ||||||| ||||||||||| |||||||||| ||||||||    
T  6097286 atgatgtgtggagcaacggaaagtagtaaccactaacaaagtgtgtgcaagctataatcaacaaaaacagcaccttgatctaat 6097369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 5406025 - 5406122
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| ||||||||||||||| |||||||| |||| ||||||||||||||||  |||||||   |||||||||||   |||||| |||||||||||||||    
T  5406025 tcacaccaatacaaactatgatgtgtggagtaaagaaaagtagtaaccaatattaaagtgagcacaagcaataat---caataatagcacctagatctaa 5406121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 5410350 - 5410447
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| ||||||||||||||| |||||||| |||| ||||||||||||||||  |||||||   |||||||||||   |||||| |||||||||||||||    
T  5410350 tcacaccaatacaaactatgatgtgtggagtaaagaaaagtagtaaccaatattaaagtgagcacaagcaataat---caataatagcacctagatctaa 5410446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 175 - 269
Target Start/End: Original strand, 33160179 - 33160272
Alignment:
Q  175 caatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaat 269  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||  |||||| ||| ||||||| || ||| | ||||| ||||||||||||||    
T  33160179 caatacaaactatgatgtgtggagcaaaggaaaatagtaaccaatttcaaagtaaatacaagcaacaa-caatattaacaacacctagatctaat 33160272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 602903 - 602958
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaa 201  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||    
T  602903 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaa 602958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 3038729 - 3038806
Alignment:
Q  148 ttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaag 226  Q
    ||||||||||  |||||||| ||| | ||||||||||||||| |||| ||||||||||||||| ||||||||| |||||    
T  3038729 ttgtgaattcgaactcaaaa-tcagaccaatacaaactatgatgtgtcgagcaaaggaaagtaataaccaatatcaaag 3038806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 14521478 - 14521603
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaa----gtagtaaccaataacaaagtgaatgcaagcaata 241  Q
    |||||||||||| ||||||||||||||| ||||  ||||||||| ||||||||||||| |||    ||||||||||||  |||||| ||  ||||||| |    
T  14521478 tgttgtgaattcggactcaaaactcacaccaat-gaaactatgatgtgtggagcaaagaaaagtacgtagtaaccaatttcaaagtaaacacaagcaaca 14521576  T
Q  242 atcaacaataacagcacctagatctaat 269  Q
    | ||| || |||| ||||||||||||||    
T  14521577 a-caataacaacaacacctagatctaat 14521603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 22963508 - 22963568
Alignment:
Q  146 tgttgtgaattc-agactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaa 206  Q
    |||||||||||| |||||||||| ||||| ||||||||||||||| ||||||||| ||||||    
T  22963508 tgttgtgaattccagactcaaaa-tcacaccaatacaaactatgatgtgtggagctaaggaa 22963568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 206
Target Start/End: Complemental strand, 23824885 - 23824825
Alignment:
Q  146 tgttgtgaattc-agactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaa 206  Q
    |||||||||||| |||||||||| ||||| ||||||||||||||| ||||||||| ||||||    
T  23824885 tgttgtgaattccagactcaaaa-tcacaccaatacaaactatgatgtgtggagctaaggaa 23824825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 412434 - 412387
Alignment:
Q  170 cacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaacca 217  Q
    |||| |||||| || ||||| |||||||||||||||||||||||||||    
T  412434 cacaccaataccaagtatgatgtgtggagcaaaggaaagtagtaacca 412387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 22424620 - 22424670
Alignment:
Q  151 tgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaa 201  Q
    ||||||| ||||||||  |||||| |||||||||||||| |||||||||||    
T  22424620 tgaattcggactcaaatttcacattaatacaaactatgatgtgtggagcaa 22424670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 412271 - 412239
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  412271 ttgttcacccagttcggtccaaacttgacctac 412239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 2171531 - 2171563
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  2171531 ttgttcacccagttcggtccaaacttgacctac 2171563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 3072758 - 3072790
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  3072758 ttgttcacccagttcggtccaaacttgacctac 3072790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 6097450 - 6097482
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  6097450 ttgttcacccagttcggtccaaacttgacctac 6097482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 16452328 - 16452360
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  16452328 ttgttcacccagttcggtccaaacttgacctac 16452360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 16555038 - 16555006
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  16555038 ttgttcacccagttcggtccaaacttgacctac 16555006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 16578517 - 16578549
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  16578517 ttgttcacccagttcggtccaaacttgacctac 16578549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 16616863 - 16616831
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  16616863 ttgttcacccagttcggtccaaacttgacctac 16616831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 16631594 - 16631562
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  16631594 ttgttcacccagttcggtccaaacttgacctac 16631562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 16653281 - 16653249
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  16653281 ttgttcacccagttcggtccaaacttgacctac 16653249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 201
Target Start/End: Complemental strand, 17758402 - 17758346
Alignment:
Q  146 tgttgtgaattcag-actcaaaactcacatcaatacaaactatgacgtgtggagcaa 201  Q
    |||||||||||| | |||||||  ||||| ||||||||||||||| |||||||||||    
T  17758402 tgttgtgaattcgggactcaaatttcacaccaatacaaactatgatgtgtggagcaa 17758346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 25421475 - 25421443
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  25421475 ttgttcacccagttcggtccaaacttgacctac 25421443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 34167249 - 34167217
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  34167249 ttgttcacccagttcggtccaaacttgacctac 34167217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 1e-38; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 148 - 269
Target Start/End: Original strand, 56178438 - 56178558
Alignment:
Q  148 ttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaac 247  Q
    |||||||||| ||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  ||||||||||| |||    
T  56178438 ttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataataaac 56178536  T
Q  248 aataacagcacctagatctaat 269  Q
    ||||||| ||||||||||||||    
T  56178537 aataacaacacctagatctaat 56178558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 13992113 - 13992213
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| |||||| || ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13992113 tcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaaccaataacaaagtgagtgcaagcaataatcaacaataacagcacctagatctaa 13992212  T
Q  269 t 269  Q
    |    
T  13992213 t 13992213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 145 - 269
Target Start/End: Complemental strand, 37740995 - 37740871
Alignment:
Q  145 ctgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatc 244  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||| ||||| |||||||||   || ||||||||    
T  37740995 ctgttgtaaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcacaggaaagtagtaatcaatatcaaagtgaacagaatcaataatc 37740896  T
Q  245 aacaataacagcacctagatctaat 269  Q
    |||||||||||||||||||||||||    
T  37740895 aacaataacagcacctagatctaat 37740871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 48143417 - 48143294
Alignment:
Q  146 tgttgtgaattcag-actcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatc 244  Q
    |||||||||||| | |||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  ||||||||||||    
T  48143417 tgttgtgaattccggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatc 48143319  T
Q  245 aacaataacagcacctagatctaat 269  Q
    |||||||||| ||||||||||||||    
T  48143318 aacaataacaacacctagatctaat 48143294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 146 - 266
Target Start/End: Original strand, 52082463 - 52082582
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||| ||||| ||||||||| ||||| ||||||| |||||||||||||||||||||| |||||||||  |||||||||||||    
T  52082463 tgttgtgaattcggactcaaaa-tcacaccaatacaaattatgatgtgtggaacaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatca 52082561  T
Q  246 acaataacagcacctagatct 266  Q
    |||||||||||||||||||||    
T  52082562 acaataacagcacctagatct 52082582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 9927258 - 9927381
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| |||||||||||| || ||||| ||||||||| |||||||||||||||||||||| ||||||| |||||| ||  |||||||||||||    
T  9927258 tgttgtgaattcggactcaaaactcgcaccaatataaactatgatgtgtggagcaaaggaaagtagttaccaatatcaaagtaaacacaagcaataatca 9927357  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||||||||||||| ||||    
T  9927358 acaataacagcacctagatttaat 9927381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 48893443 - 48893564
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||  |||||||||| ||    
T  48893443 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaataa-ca 48893540  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||||||||||||||||||    
T  48893541 acaataacagcacctagatctaat 48893564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 52095162 - 52095284
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||  |||| ||||||||    
T  52095162 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgacgtgtggaacaaaggaaagtagtaatcaatatcaaagtgaacacaagtaataatca 52095260  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||| ||||||||||||||    
T  52095261 acaataacaacacctagatctaat 52095284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 5369904 - 5370004
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| ||||||||||||||| |||||||| ||||||||||||||| ||||| |||||||||  ||||||||||||||||||||||||||||||||||||    
T  5369904 tcacaccaatacaaactatgatgtgtggagtaaaggaaagtagtaatcaatatcaaagtgaacacaagcaataatcaacaataacagcacctagatctaa 5370003  T
Q  269 t 269  Q
    |    
T  5370004 t 5370004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 145 - 269
Target Start/End: Original strand, 54199707 - 54199830
Alignment:
Q  145 ctgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatc 244  Q
    ||||||||||||| ||||||||| ||||| |||||||||| |||| || |||||||||||||||||||||||| || |||||||||  ||||||||||||    
T  54199707 ctgttgtgaattcggactcaaaa-tcacaccaatacaaacgatgatgtatggagcaaaggaaagtagtaaccagtatcaaagtgaacacaagcaataatc 54199805  T
Q  245 aacaataacagcacctagatctaat 269  Q
    | |||||||| ||||||||||||||    
T  54199806 agcaataacatcacctagatctaat 54199830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 26175436 - 26175558
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||  |||||| ||  |||||||| | ||    
T  26175436 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatttcaaagtaaacacaagcaat-agca 26175534  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||||||||||||||    
T  26175535 ataataacaacacctagatctaat 26175558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 148 - 269
Target Start/End: Original strand, 52467159 - 52467280
Alignment:
Q  148 ttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaac 247  Q
    |||||||||| ||||||||||||||| ||||||||||||||| ||||| ||||||||||||| |||||||||| |||||| ||  |||||||| |||||     
T  52467159 ttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtgaagcaaaggaaagtggtaaccaatatcaaagtaaagacaagcaatcatcaat 52467258  T
Q  248 aataacagcacctagatctaat 269  Q
    ||||||| ||| ||||||||||    
T  52467259 aataacaacacatagatctaat 52467280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 34570214 - 34570336
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    ||||| |||||| || |||||| ||||| ||||| ||||||||| |||||||||||||||||||||||||||||| |||| ||||  ||| |||||||||    
T  34570214 tgttgcgaattcggattcaaaa-tcacaccaatataaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaaatgaacacaaacaataatca 34570312  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||| ||||||||||||||    
T  34570313 acaataacaacacctagatctaat 34570336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 46147195 - 46147317
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| | ||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||| |||||||||  ||||||| || ||    
T  46147195 tgttgtgaattccgcctcaaaactcacaccaatgcaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaa-ca 46147293  T
Q  246 acaataacagcacctagatctaat 269  Q
    | |||||||  |||||||||||||    
T  46147294 ataataacaatacctagatctaat 46147317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 12739353 - 12739472
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| |||||||| ||| ||||||||||||||||  |||||| ||  |||||||||||      
T  12739353 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagtaaaagaaagtagtaaccaatttcaaagtaaacacaagcaataat-- 12739450  T
Q  246 acaataacagcacctagatctaat 269  Q
      ||||||| ||||||||||||||    
T  12739451 --aataacaacacctagatctaat 12739472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 12743728 - 12743847
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||  |||||| ||  |||||||    ||    
T  12743728 tgttgtgaattcggactcaaaactcacaccaatacaaactatgttgtgtggagcaaaggaaagtagtaaccaatttcaaagtaaacacaagcaa----ca 12743823  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||||||||||||||    
T  12743824 ataataacaacacctagatctaat 12743847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 149 - 269
Target Start/End: Original strand, 47038219 - 47038337
Alignment:
Q  149 tgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaaca 248  Q
    ||||||||  ||||||||| ||||| ||||||||||||||| ||||||| |||||||||||||||||||||| |||||| ||  ||| |||||| |||||    
T  47038219 tgtgaatttggactcaaaa-tcacaccaatacaaactatgatgtgtggaacaaaggaaagtagtaaccaatatcaaagtaaacacaaacaataa-caaca 47038316  T
Q  249 ataacagcacctagatctaat 269  Q
    |||||| ||||||||||||||    
T  47038317 ataacaacacctagatctaat 47038337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 36463196 - 36463319
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| ||||||||| |||||  |||||||||||||| |||||||| ||||||||||| ||||||||| |||||| ||  ||||||| || ||    
T  36463196 tgttgtgaattcggactcaaaa-tcacactaatacaaactatgatgtgtggagtaaaggaaagtaataaccaatatcaaagtaaacacaagcaacaa-ca 36463293  T
Q  246 acaataacagcacctagatctaattt 271  Q
    | ||||||| ||||||||||||||||    
T  36463294 ataataacaacacctagatctaattt 36463319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 45686987 - 45687066
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaag 226  Q
    |||||||||||||||||||||| ||||| ||||||||||||||| || ||||||||||||||||||||||||||| |||||    
T  45686987 tgttgtgaattcagactcaaaa-tcacaccaatacaaactatgatgtatggagcaaaggaaagtagtaaccaatatcaaag 45687066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 5872183 - 5872064
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||| | ||||||||| ||||| |||||||||||  || |||||||||||||||||||||||||||||| |||||||||  ||| ||| || ||    
T  5872183 tgttgtgaatccggactcaaaa-tcacaccaatacaaact--gatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaaacaacaa-ca 5872088  T
Q  246 acaataacagcacctagatctaat 269  Q
    | ||||||| ||||||||||||||    
T  5872087 ataataacaacacctagatctaat 5872064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 175 - 269
Target Start/End: Original strand, 31495132 - 31495227
Alignment:
Q  175 caatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaa--gtgaatgcaagcaataatcaacaataacagcacctagatctaat 269  Q
    |||||| || ||||| |||||||||||||||||||||||||||  ||||||  |||  ||||||||||||||||||| |||||||||||||||||||    
T  31495132 caatacgaaatatgatgtgtggagcaaaggaaagtagtaaccatcaacaaagtgtgtgtgcaagcaataatcaacaa-aacagcacctagatctaat 31495227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 29999651 - 29999711
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtga 229  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  29999651 tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtga 29999711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 31474512 - 31474393
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| |||||||   ||||| |||||||||| |||| ||||| |||||| ||||||||||| ||||| |||||| ||  ||| ||| || ||    
T  31474512 tgttgtgaattcggactcaa---tcacaccaatacaaacaatgatgtgtgtagcaaatgaaagtagtaatcaatatcaaagtaaacacaaacaacaa-ca 31474417  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||| ||||||||||||||    
T  31474416 acaataacaacacctagatctaat 31474393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 205 - 269
Target Start/End: Complemental strand, 5429989 - 5429925
Alignment:
Q  205 aaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaat 269  Q
    |||||||||| ||||| |||||||||  ||| |||||||||||||||||||||||||||||||||    
T  5429989 aaagtagtaatcaatatcaaagtgaacacaaacaataatcaacaataacagcacctagatctaat 5429925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 145 - 269
Target Start/End: Original strand, 6541986 - 6542105
Alignment:
Q  145 ctgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatc 244  Q
    ||||||||||||| |||  |||||||||||||||| | ||| ||| |||||||||||||||||||| ||||||||| |||||| |   |||||||    |    
T  6541986 ctgttgtgaattcggacataaaactcacatcaata-atactttgatgtgtggagcaaaggaaagtaataaccaatatcaaagtaatcacaagcaa----c 6542080  T
Q  245 aacaataacagcacctagatctaat 269  Q
    ||||||||||  |||||||||||||    
T  6542081 aacaataacaaaacctagatctaat 6542105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 146 - 201
Target Start/End: Complemental strand, 41639801 - 41639746
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaa 201  Q
    |||||||||||||||||||||  ||||||||||||||||||||| |||||||||||    
T  41639801 tgttgtgaattcagactcaaatttcacatcaatacaaactatgatgtgtggagcaa 41639746  T

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Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 50262487 - 50262542
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaa 201  Q
    |||||||||||||||||||||  ||||| ||||||||||||||| |||||||||||    
T  50262487 tgttgtgaattcagactcaaatttcacaccaatacaaactatgatgtgtggagcaa 50262542  T

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Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 269
Target Start/End: Complemental strand, 29254831 - 29254740
Alignment:
Q  176 aatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaat 269  Q
    |||||||||||||| |||||||||||| |||||||||||||||||  ||||||||  ||| |||  | ||| ||||||| ||||||||||||||    
T  29254831 aatacaaactatgatgtgtggagcaaa-gaaagtagtaaccaatattaaagtgaacacaaacaacga-caataataacaacacctagatctaat 29254740  T

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Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 189
Target Start/End: Complemental strand, 36994898 - 36994855
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatga 189  Q
    |||||||||||| ||||||||||||||| |||||||||||||||    
T  36994898 tgttgtgaattctgactcaaaactcacaccaatacaaactatga 36994855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 226
Target Start/End: Complemental strand, 4588320 - 4588240
Alignment:
Q  146 tgttgtgaattcagactcaaaa-ctcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaag 226  Q
    |||||||||||| ||||||||| |||||| ||||| | ||| ||| ||||||||||||||||| ||||||||| || |||||    
T  4588320 tgttgtgaattcggactcaaaaactcacaccaata-atactttgatgtgtggagcaaaggaaaatagtaaccactatcaaag 4588240  T

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Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 148 - 273
Target Start/End: Original strand, 37229531 - 37229652
Alignment:
Q  148 ttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaac 247  Q
    |||||||||| ||||||||| | | | ||||| ||||||||  ||||||||||| || ||||||||||||||| |||||| |   |||||||||| ||||    
T  37229531 ttgtgaattcggactcaaaa-taaaaccaata-aaactatgttgtgtggagcaatgggaagtagtaaccaatatcaaagtaacaacaagcaataa-caac 37229627  T
Q  248 aataacagcacctagatctaatttag 273  Q
    ||||||   |||||||||||||||||    
T  37229628 aataac-caacctagatctaatttag 37229652  T

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Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 5370082 - 5370114
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||||||||||||||||||||||||||||    
T  5370082 ttgttcactcagttcggtccaaacttgacctac 5370114  T

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Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 214
Target Start/End: Original strand, 5207651 - 5207717
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaa 214  Q
    |||||| ||| ||||||||||| ||||| ||||| ||| ||||  ||||||||||||||||||||||||    
T  5207651 tgttgttaatgcagactcaaaa-tcacaccaatataaa-tatggtgtgtggagcaaaggaaagtagtaa 5207717  T

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Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 8393563 - 8393531
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  8393563 ttgttcacccagttcggtccaaacttgacctac 8393531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 8395772 - 8395740
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  8395772 ttgttcacccagttcggtccaaacttgacctac 8395740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 31495315 - 31495347
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  31495315 ttgttcacccagttcggtccaaacttgacctac 31495347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 56178636 - 56178668
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  56178636 ttgttcacccagttcggtccaaacttgacctac 56178668  T

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Target: scaffold0066 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 20216 - 20337
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 245  Q
    |||||||||||| |||||||  |||| | ||||||||||||||| |||||||||||||||| ||||||||||||  |||||||||  ||||||||||| |    
T  20216 tgttgtgaattcggactcaa--ctcataccaatacaaactatgatgtgtggagcaaaggaaggtagtaaccaatgtcaaagtgaacacaagcaataatta 20313  T
Q  246 acaataacagcacctagatctaat 269  Q
    ||||||||||||||||||||||||    
T  20314 acaataacagcacctagatctaat 20337  T

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Target: scaffold0286 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 11912 - 11817
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagat 264  Q
    ||||| |||||| |||||||| ||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||    
T  11912 tcacaccaatacgaactatgatgtgtggagcaaaggaaagtagtaaccactaacaaagtgtgtgcaagcaataatcaacaataacagcacctagat 11817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 11726 - 11694
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  11726 ttgttcacccagttcggtccaaacttgacctac 11694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 1262 - 1162
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| |||||| |||||||| ||||||| ||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||    
T  1262 tcacaccaatacgaactatgatgtgtggaacaaaggatagtagtaaccaatgacaatgtgaatgcaagcaataatcaacaataacaccacctagatctaa 1163  T
Q  269 t 269  Q
    |    
T  1162 t 1162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 1084 - 1052
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  1084 ttgttcacccagttcggtccaaacttgacctac 1052  T

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Target: scaffold0491 (Bit Score: 64; Significance: 7e-28; HSPs: 4)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 170 - 269
Target Start/End: Original strand, 10982 - 11081
Alignment:
Q  170 cacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaat 269  Q
    |||| ||||||||| |||||  |||||||||||||||||||||||||||| || |||||  |||||||||||||||||||||||| ||||||||||||||    
T  10982 cacaccaatacaaagtatgatatgtggagcaaaggaaagtagtaaccaatgactaagtgggtgcaagcaataatcaacaataacaacacctagatctaat 11081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 170 - 269
Target Start/End: Original strand, 8556 - 8655
Alignment:
Q  170 cacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaat 269  Q
    |||| ||||||||| |||||   ||||||||||||||||||||||||||| || |||||  |||||||||||||||||||||||| ||||||||||||||    
T  8556 cacaccaatacaaagtatgatacgtggagcaaaggaaagtagtaaccaatgactaagtgggtgcaagcaataatcaacaataacaacacctagatctaat 8655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 8734 - 8766
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  8734 ttgttcacccagttcggtccaaacttgacctac 8766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 11160 - 11192
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  11160 ttgttcacccagttcggtccaaacttgacctac 11192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 434880 - 434780
Alignment:
Q  169 tcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaa 268  Q
    ||||| |||||| |||||||| ||||||||||||||||||||||||||| ||  ||||||  | ||| ||||||||||||||||||||||||||||||||    
T  434880 tcacaccaatacgaactatgatgtgtggagcaaaggaaagtagtaaccattattaaagtgttttcaatcaataatcaacaataacagcacctagatctaa 434781  T
Q  269 t 269  Q
    |    
T  434780 t 434780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 434702 - 434670
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  434702 ttgttcacccagttcggtccaaacttgacctac 434670  T

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Target: scaffold0016 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 114950 - 114849
Alignment:
Q  169 tcacatcaatacaaa-ctatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatcta 267  Q
    ||||| ||||||||| |||||| |||||||||||||||||||| ||||||||| |||||||||  ||| |||||||||||||||||| |||||| |||||    
T  114950 tcacaccaatacaaaactatgatgtgtggagcaaaggaaagtaataaccaatatcaaagtgaacacaatcaataatcaacaataacaacacctatatcta 114851  T
Q  268 at 269  Q
    ||    
T  114850 at 114849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 148 - 242
Target Start/End: Original strand, 148914 - 149007
Alignment:
Q  148 ttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataa 242  Q
    |||||||||| ||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| | |||||| ||  ||||||||||    
T  148914 ttgtgaattcggactcaaaa-tcacatcaatacaaactataatgtgtggagcaaaggaaagtagtaaccaacatcaaagtaaacacaagcaataa 149007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1668 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1668
Description:

Target: scaffold1668; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 1301 - 1424
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaataacaaag-tgaatgcaagcaataatc 244  Q
    ||||||||||||  || ||||||||||| |||||||| |||||| |||||||||||||||||||||||| |||||  |||| | ||  |||| ||||| |    
T  1301 tgttgtgaattcgaacacaaaactcacaccaatacaatctatgatgtgtggagcaaaggaaagtagtaatcaatattaaagttaaacacaagtaataa-c 1399  T
Q  245 aacaataacagcacctagatctaat 269  Q
    ||| |||||||||||||||||||||    
T  1400 aacgataacagcacctagatctaat 1424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 220
Target Start/End: Original strand, 27250 - 27321
Alignment:
Q  146 tgttgtgaattcagactcaaaactcacatcaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaata 220  Q
    |||||||||||| |||||||| |||||||||||  |||||  || |||||||| ||||| |||||||||||||||    
T  27250 tgttgtgaattcggactcaaatctcacatcaat--aaacttagaagtgtggagaaaagg-aagtagtaaccaata 27321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 2603 - 2635
Alignment:
Q  346 ttgttcactcagttcggtccaaacttgacctac 378  Q
    |||||||| ||||||||||||||||||||||||    
T  2603 ttgttcacccagttcggtccaaacttgacctac 2635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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