View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18429_low_5 (Length: 362)
Name: NF18429_low_5
Description: NF18429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18429_low_5 |
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Alignment Details
Target: chr1 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 46486188 - 46486431
Alignment:
| Q |
1 |
gaggggatgttagggcaagaacgtacaaaaggacaaaaattgtgtgtggaaaaataacaaattatgagtacaatgtaaaagccacctactgttctggcaa |
100 |
Q |
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| T |
46486188 |
gaggggatgttagggcaagaacgtagaaaaggacaaaaattgtgtgtggaaaaataagaaattatgagtacaatgtaaaagccaccttctgttctggcaa |
46486287 |
T |
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| Q |
101 |
cttgtagttctagccataattaagatgtgtttgaaatctaaactagattccaagcttgaaatcataagttgattgagacaaatacatcacaaaacaccat |
200 |
Q |
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| T |
46486288 |
cttgtagttctagccataattaagatgtgtttgaaatctaaactagattccaagcttgaaatcataagttgattgagacaaatacatcacaaaacaccat |
46486387 |
T |
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| Q |
201 |
acatgaaaaattaggacgaaagagacgcttagtccaagaacaag |
244 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46486388 |
acatgaaaaattaggacgaaagagacgcttagtccaagaacaag |
46486431 |
T |
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