View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18430_low_8 (Length: 313)
Name: NF18430_low_8
Description: NF18430
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18430_low_8 |
 | |
|
| [»] scaffold0891 (1 HSPs) |
| | |
|
| [»] scaffold1335 (1 HSPs) |
| |
|
| [»] scaffold1267 (1 HSPs) |
| | |
|
| [»] scaffold1268 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 218; Significance: 1e-120; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 28 - 309
Target Start/End: Original strand, 35869035 - 35869316
Alignment:
| Q |
28 |
acaagctctttcaaaggagcataaaagttatttttacttgcttcacacaacggtataatatcttgtgttgcatctttatctgattctggtaaaccatcgg |
127 |
Q |
| |
|
||||||||||| |||||||||||| | || ||| || |||| |||||||||| | ||||||||||||||||||||||||||| ||||| |||||||| | |
|
|
| T |
35869035 |
acaagctctttgaaaggagcataacaattttttctagttgcatcacacaacgttggaatatcttgtgttgcatctttatctgactctggcaaaccatcag |
35869134 |
T |
|
| Q |
128 |
gtatggtctcaaattgaaaatctggtagacccttcacaaactcagctccaagagattttatcaaacgtttgtggttgaattcagtgttcacaaaggttat |
227 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35869135 |
gtatggtctcaaattgaaaatctggtagacccttcacaaactcagctccaagagattttatcaaacgtttgtggttgaattcagtgttcacaaaggttat |
35869234 |
T |
|
| Q |
228 |
gtgaaaaccgttgcaacgtaggagtttggctaattgcatgaaagggttcacatgaccttgtactggaaatggtacaaataca |
309 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||| |
|
|
| T |
35869235 |
gtgaaaaccgttgcaacgtaggagtttggctaattgcatgaaagggttcacatgaccttgtgctggaaatggtgctaataca |
35869316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 21 - 313
Target Start/End: Original strand, 35776104 - 35776396
Alignment:
| Q |
21 |
ctttttgacaagctctttcaaaggagcataaaagttatttttacttgcttcacacaacggtataatatcttgtgttgcatctttatctgattctggtaaa |
120 |
Q |
| |
|
|||||| |||||||||||||||||||| | |||||| ||| ||||||||||||||||||||| || |||||||||||||| |||||| |||||||||||| |
|
|
| T |
35776104 |
ctttttcacaagctctttcaaaggagcgtgaaagttttttctacttgcttcacacaacggtacaacatcttgtgttgcatttttatcagattctggtaaa |
35776203 |
T |
|
| Q |
121 |
ccatcgggtatggtctcaaattgaaaatctggtagacccttcacaaactcagctccaagagattttatcaaacgtttgtggttgaattcagtgttcacaa |
220 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35776204 |
ccatcgggtatagtctcaaattgaaaatctggtagacccttcacaaagtcttgtccaagcgattttatcaaacgtttgtggttgaattcagtgttcacaa |
35776303 |
T |
|
| Q |
221 |
aggttatgtgaaaaccgttgcaacgtaggagtttggctaattgcatgaaagggttcacatgaccttgtactggaaatggtacaaatacagcat |
313 |
Q |
| |
|
|||||||||||||||| |||||||| | ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35776304 |
aggttatgtgaaaacctttgcaacgaaagagtttggcaagttgcatgaaagggttcacatgaccttgtactggaaatggtacaaatacagcat |
35776396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 25 - 309
Target Start/End: Original strand, 35854423 - 35854707
Alignment:
| Q |
25 |
ttgacaagctctttcaaaggagcataaaagttatttttacttgcttcacacaacggtataatatcttgtgttgcatctttatctgattctggtaaaccat |
124 |
Q |
| |
|
|||| ||||||||| |||||||||||| | || ||| || |||| |||||||||| | ||||||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
35854423 |
ttgataagctctttgaaaggagcataacaattttttctagttgcatcacacaacgttggaatatcttgtgttgcatctttatctgactctggcaaaccat |
35854522 |
T |
|
| Q |
125 |
cgggtatggtctcaaattgaaaatctggtagacccttcacaaactcagctccaagagattttatcaaacgtttgtggttgaattcagtgttcacaaaggt |
224 |
Q |
| |
|
| |||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35854523 |
caggtatggtctcaaattgaaaatctggtagaccattcacaaagtcttgtccaagagattttatcaaacgtttgtggttgaattcagtgttcacaaaggt |
35854622 |
T |
|
| Q |
225 |
tatgtgaaaaccgttgcaacgtaggagtttggctaattgcatgaaagggttcacatgaccttgtactggaaatggtacaaataca |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |
|
|
| T |
35854623 |
tatgtgaaaaccgttgcaacgtaggagtttggctaattgcatgaaagggttcacatgaccttgtgctggaaatggtactaataca |
35854707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 174 - 309
Target Start/End: Original strand, 35842064 - 35842199
Alignment:
| Q |
174 |
tccaagagattttatcaaacgtttgtggttgaattcagtgttcacaaaggttatgtgaaaaccgttgcaacgtaggagtttggctaattgcatgaaaggg |
273 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35842064 |
tccaagagattttatcaaacgtttgtggttgaattcagtgttcacaaaggttatgtgaaaaccgttgcaacgtaggagtttggctaattgcatgaaaggg |
35842163 |
T |
|
| Q |
274 |
ttcacatgaccttgtactggaaatggtacaaataca |
309 |
Q |
| |
|
||||||||||||||| ||||||||||| | |||||| |
|
|
| T |
35842164 |
ttcacatgaccttgtgctggaaatggtgctaataca |
35842199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 25 - 313
Target Start/End: Original strand, 35759683 - 35759971
Alignment:
| Q |
25 |
ttgacaagctctttcaaaggagcataaaagttatttttacttgcttcacacaacggtataatatcttgtgttgcatctttatctgattctggtaaaccat |
124 |
Q |
| |
|
|||| ||||||||| |||||||||||| | || ||| || |||| |||||||||| | ||||||||||||||||||||||| | || ||||||| |
|
|
| T |
35759683 |
ttgagaagctctttgaaaggagcataacaattttttctagttgcatcacacaacgttggaatatcttgtgttgcatctttataaaaaaaaggcaaaccat |
35759782 |
T |
|
| Q |
125 |
cgggtatggtctcaaattgaaaatctggtagacccttcacaaactcagctccaagagattttatcaaacgtttgtggttgaattcagtgttcacaaaggt |
224 |
Q |
| |
|
| |||||||||||||||||||||||||||||||| |||| | | || |||||| || |||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
35759783 |
caggtatggtctcaaattgaaaatctggtagaccattcatataatcttgtccaagtgagtttaccaaacgtttgtggttgaattcagtgttcacaaaggt |
35759882 |
T |
|
| Q |
225 |
tatgtgaaaaccgttgcaacgtaggagtttggctaattgcatgaaagggttcacatgaccttgtactggaaatggtacaaatacagcat |
313 |
Q |
| |
|
|||||| |||||||||||||| |||||||| |||| |||||| || || || |||||||| ||| |||| |||| || |||||||||| |
|
|
| T |
35759883 |
tatgtggaaaccgttgcaacgcaggagtttagctagttgcattaagggattaacatgaccctgtgctgggtatggcactaatacagcat |
35759971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 90 - 303
Target Start/End: Original strand, 35737923 - 35738136
Alignment:
| Q |
90 |
ttgtgttgcatctttatctgattctggtaaaccatcgggtatggtctcaaattgaaaatctggtagacccttcacaaactcagctccaagagattttatc |
189 |
Q |
| |
|
||||||||||| | ||| ||| ||| |||||||| ||||| |||||||| |||||||||| ||||||| | ||| ||| |||||||||||||||| |
|
|
| T |
35737923 |
ttgtgttgcattctcatcagatggtggcaaaccatctggtatagtctcaaacctaaaatctggttgaccctttaaaaagtcatgtccaagagattttatc |
35738022 |
T |
|
| Q |
190 |
aaacgtttgtggttgaattcagtgttcacaaaggttatgtgaaaacc---gttgcaacgtaggagtttggctaattgcatgaaagggttcacatgacctt |
286 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||| ||||| ||| | |||| ||| |||||||||||||||||||| || ||||||| |
|
|
| T |
35738023 |
aaacgtttgtggttgaattcattgttcacaaaggttatgtggaaaccaagtttgtta---aggattttagctaattgcatgaaagggtttacgtgacctt |
35738119 |
T |
|
| Q |
287 |
gtactggaaatggtaca |
303 |
Q |
| |
|
|| |||||||||||||| |
|
|
| T |
35738120 |
gtgctggaaatggtaca |
35738136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0891 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: scaffold0891
Description:
Target: scaffold0891; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 22 - 212
Target Start/End: Complemental strand, 191 - 1
Alignment:
| Q |
22 |
tttttgacaagctctttcaaaggagcataaaagttatttttacttgcttcacacaacggtataatatcttgtgttgcatctttatctgattctggtaaac |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
191 |
tttttgacaagctctttcaaaggagcataaaagttatttttacttgcttcacacaacggtataatatcttgtgttgcatctttatctgattctggtaaac |
92 |
T |
|
| Q |
122 |
catcgggtatggtctcaaattgaaaatctggtagacccttcacaaactcagctccaagagattttatcaaacgtttgtggttgaattcagt |
212 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
91 |
catcaggtatggtctcaaattgaaaatctggtagacccttcacaaactcagctccaagagattttatcaaacgtttgtggttgaattcagt |
1 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1335 (Bit Score: 141; Significance: 6e-74; HSPs: 1)
Name: scaffold1335
Description:
Target: scaffold1335; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 133 - 313
Target Start/End: Complemental strand, 2027 - 1847
Alignment:
| Q |
133 |
gtctcaaattgaaaatctggtagacccttcacaaactcagctccaagagattttatcaaacgtttgtggttgaattcagtgttcacaaaggttatgtgaa |
232 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |
|
|
| T |
2027 |
gtctcaaattgaaaatctggtagacccttcacaaactcagctccaagagattttatcaaacgtttgtggttgaattcagtgttcacaaaggttatatgga |
1928 |
T |
|
| Q |
233 |
aaccgttgcaacgtaggagtttggctaattgcatgaaagggttcacatgaccttgtactggaaatggtacaaatacagcat |
313 |
Q |
| |
|
|||| |||||||| | ||||||||||| |||||| | |||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
1927 |
aacctttgcaacggaagagtttggctagttgcatcattgggttcacatgaccttgtgctggaaatggtacaaatacagcat |
1847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1267 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold1267
Description:
Target: scaffold1267; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 28 - 182
Target Start/End: Complemental strand, 155 - 1
Alignment:
| Q |
28 |
acaagctctttcaaaggagcataaaagttatttttacttgcttcacacaacggtataatatcttgtgttgcatctttatctgattctggtaaaccatcgg |
127 |
Q |
| |
|
||||||||||| |||||||||||| | || ||| || |||| |||||||||| | ||||||||||||||||||||||||||| ||||| |||||||| | |
|
|
| T |
155 |
acaagctctttgaaaggagcataacaattttttctagttgcatcacacaacgttggaatatcttgtgttgcatctttatctgactctggcaaaccatcag |
56 |
T |
|
| Q |
128 |
gtatggtctcaaattgaaaatctggtagacccttcacaaactcagctccaagaga |
182 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
55 |
gtatggtctcaaattgaaaatctggtagacccttcacaaactcagctccaagaga |
1 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1268 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold1268
Description:
Target: scaffold1268; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 30 - 182
Target Start/End: Complemental strand, 153 - 1
Alignment:
| Q |
30 |
aagctctttcaaaggagcataaaagttatttttacttgcttcacacaacggtataatatcttgtgttgcatctttatctgattctggtaaaccatcgggt |
129 |
Q |
| |
|
||||||||| |||||||||||| | || ||| || |||| |||||||||| | ||||||||||||||||||||||||||| ||||| |||||||| ||| |
|
|
| T |
153 |
aagctctttgaaaggagcataacaattttttctagttgcatcacacaacgttggaatatcttgtgttgcatctttatctgactctggcaaaccatcaggt |
54 |
T |
|
| Q |
130 |
atggtctcaaattgaaaatctggtagacccttcacaaactcagctccaagaga |
182 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53 |
atggtctcaaattgaaaatctggtagacccttcacaaactcagctccaagaga |
1 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 14)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 4482283 - 4482335
Alignment:
| Q |
181 |
gattttatcaaacgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
233 |
Q |
| |
|
||||||| |||||||||||| ||| |||| ||||| ||||||||||||||||| |
|
|
| T |
4482283 |
gattttagcaaacgtttgtgattgtattcggtgttgacaaaggttatgtgaaa |
4482335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 4575881 - 4575925
Alignment:
| Q |
189 |
caaacgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
233 |
Q |
| |
|
|||||||||||| ||| |||||||||| ||||||||||||||||| |
|
|
| T |
4575881 |
caaacgtttgtgattgtattcagtgttaacaaaggttatgtgaaa |
4575925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 4627576 - 4627620
Alignment:
| Q |
189 |
caaacgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
233 |
Q |
| |
|
|||||||||||| ||| |||||||||| ||||||||||||||||| |
|
|
| T |
4627576 |
caaacgtttgtgattgtattcagtgttgacaaaggttatgtgaaa |
4627620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 4258878 - 4258831
Alignment:
| Q |
189 |
caaacgtttgtggttgaattcagtgttcacaaaggttatgtgaaaacc |
236 |
Q |
| |
|
|||||||||||| || |||||||||| |||||||||||||||||||| |
|
|
| T |
4258878 |
caaacgtttgtgattatattcagtgttgacaaaggttatgtgaaaacc |
4258831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 3173433 - 3173473
Alignment:
| Q |
193 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
233 |
Q |
| |
|
|||||||| ||| |||||||||| ||||||||||||||||| |
|
|
| T |
3173433 |
cgtttgtgattgtattcagtgtttacaaaggttatgtgaaa |
3173473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 4265755 - 4265715
Alignment:
| Q |
193 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
233 |
Q |
| |
|
|||||||| ||| |||||||||| ||||||||||||||||| |
|
|
| T |
4265755 |
cgtttgtgattgtattcagtgttgacaaaggttatgtgaaa |
4265715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 236
Target Start/End: Original strand, 4462640 - 4462680
Alignment:
| Q |
196 |
ttgtggttgaattcagtgttcacaaaggttatgtgaaaacc |
236 |
Q |
| |
|
||||| ||| |||||||||| |||||||||||||||||||| |
|
|
| T |
4462640 |
ttgtgattgtattcagtgttgacaaaggttatgtgaaaacc |
4462680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 4488895 - 4488855
Alignment:
| Q |
193 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
233 |
Q |
| |
|
|||||||| ||| |||||||||| ||||||||||||||||| |
|
|
| T |
4488895 |
cgtttgtgattgtattcagtgttgacaaaggttatgtgaaa |
4488855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 4513681 - 4513637
Alignment:
| Q |
189 |
caaacgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
233 |
Q |
| |
|
|||||||||||| ||| |||| ||||| ||||||||||||||||| |
|
|
| T |
4513681 |
caaacgtttgtgattgtattcggtgttaacaaaggttatgtgaaa |
4513637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 4517766 - 4517810
Alignment:
| Q |
189 |
caaacgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
233 |
Q |
| |
|
|||||||||||| ||| |||| ||||| ||||||||||||||||| |
|
|
| T |
4517766 |
caaacgtttgtgattgtattcggtgttgacaaaggttatgtgaaa |
4517810 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 4558555 - 4558595
Alignment:
| Q |
193 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
233 |
Q |
| |
|
|||||||||||| |||||||||| ||| ||||||||||||| |
|
|
| T |
4558555 |
cgtttgtggttgtattcagtgtttacataggttatgtgaaa |
4558595 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 4587062 - 4587102
Alignment:
| Q |
193 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
233 |
Q |
| |
|
|||||||| ||| |||||||||| ||||||||||||||||| |
|
|
| T |
4587062 |
cgtttgtgattgtattcagtgtttacaaaggttatgtgaaa |
4587102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 4594436 - 4594480
Alignment:
| Q |
189 |
caaacgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
233 |
Q |
| |
|
||||||||| || ||| |||||||||| ||||||||||||||||| |
|
|
| T |
4594436 |
caaacgtttatgattgtattcagtgttgacaaaggttatgtgaaa |
4594480 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 4603536 - 4603580
Alignment:
| Q |
189 |
caaacgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
233 |
Q |
| |
|
|||||||||||| ||| |||| ||||| ||||||||||||||||| |
|
|
| T |
4603536 |
caaacgtttgtgattgtattcggtgttgacaaaggttatgtgaaa |
4603580 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 229
Target Start/End: Complemental strand, 1349615 - 1349579
Alignment:
| Q |
193 |
cgtttgtggttgaattcagtgttcacaaaggttatgt |
229 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
1349615 |
cgtttgtggttgaattcagtgttgacaaatgttatgt |
1349579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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