View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18431_high_1 (Length: 845)

Name: NF18431_high_1
Description: NF18431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18431_high_1
NF18431_high_1
[»] chr6 (23 HSPs)
chr6 (22-107)||(7927671-7927756)
chr6 (45-116)||(27928107-27928176)
chr6 (789-833)||(7917179-7917223)
chr6 (42-89)||(331909-331956)
chr6 (45-127)||(8809300-8809377)
chr6 (44-110)||(20480634-20480699)
chr6 (45-118)||(24373709-24373777)
chr6 (48-128)||(12440655-12440735)
chr6 (44-128)||(13496109-13496188)
chr6 (47-89)||(14552333-14552375)
chr6 (48-89)||(1918481-1918522)
chr6 (44-89)||(7281421-7281466)
chr6 (44-89)||(12336349-12336394)
chr6 (45-89)||(12412271-12412315)
chr6 (50-89)||(12033-12072)
chr6 (50-89)||(6470639-6470678)
chr6 (45-119)||(8569703-8569772)
chr6 (43-89)||(18256875-18256921)
chr6 (51-89)||(28957109-28957147)
chr6 (87-128)||(2546211-2546252)
chr6 (44-89)||(19277567-19277612)
chr6 (46-123)||(20744133-20744205)
chr6 (90-123)||(34481408-34481441)
[»] chr1 (50 HSPs)
chr1 (45-128)||(41950073-41950156)
chr1 (45-116)||(7484691-7484761)
chr1 (44-89)||(36672737-36672782)
chr1 (45-123)||(41573254-41573336)
chr1 (45-89)||(15729424-15729468)
chr1 (44-128)||(17139506-17139585)
chr1 (50-89)||(11242008-11242047)
chr1 (86-123)||(2994788-2994825)
chr1 (44-89)||(3528492-3528537)
chr1 (48-89)||(8153132-8153173)
chr1 (44-89)||(9116895-9116940)
chr1 (45-119)||(18091197-18091267)
chr1 (48-85)||(34877668-34877705)
chr1 (44-89)||(44641520-44641565)
chr1 (87-123)||(1794627-1794663)
chr1 (45-89)||(7925358-7925402)
chr1 (87-123)||(8269362-8269398)
chr1 (45-117)||(11014226-11014293)
chr1 (87-123)||(12268978-12269014)
chr1 (45-89)||(16033473-16033517)
chr1 (45-89)||(22388198-22388242)
chr1 (45-89)||(30678836-30678880)
chr1 (41-89)||(33153903-33153951)
chr1 (52-116)||(34083637-34083700)
chr1 (45-89)||(36371063-36371107)
chr1 (45-89)||(39916948-39916992)
chr1 (45-89)||(41998345-41998389)
chr1 (45-85)||(43840352-43840392)
chr1 (45-89)||(48131251-48131295)
chr1 (50-89)||(10292935-10292974)
chr1 (45-128)||(27533237-27533315)
chr1 (44-119)||(34632162-34632232)
chr1 (46-89)||(44220982-44221025)
chr1 (92-123)||(52086145-52086176)
chr1 (43-89)||(2884471-2884517)
chr1 (45-123)||(18166596-18166669)
chr1 (45-123)||(26010216-26010289)
chr1 (45-127)||(26755610-26755687)
chr1 (45-86)||(1091173-1091214)
chr1 (48-89)||(1864242-1864283)
chr1 (46-123)||(5280626-5280698)
chr1 (62-123)||(13401608-13401664)
chr1 (85-114)||(17434516-17434545)
chr1 (44-89)||(28006735-28006780)
chr1 (43-124)||(29506819-29506895)
chr1 (44-89)||(31401676-31401721)
chr1 (44-89)||(31890772-31890817)
chr1 (86-123)||(32561003-32561040)
chr1 (60-89)||(41142709-41142738)
chr1 (40-89)||(51127913-51127962)
[»] chr7 (38 HSPs)
chr7 (45-123)||(36803832-36803909)
chr7 (48-89)||(3948051-3948092)
chr7 (50-111)||(46551847-46551908)
chr7 (45-89)||(22267575-22267619)
chr7 (49-119)||(23147285-23147353)
chr7 (45-123)||(19599139-19599212)
chr7 (46-89)||(44106623-44106666)
chr7 (49-111)||(1285075-1285132)
chr7 (46-117)||(19050419-19050486)
chr7 (45-116)||(19793798-19793865)
chr7 (47-89)||(25246767-25246809)
chr7 (45-123)||(32062017-32062090)
chr7 (45-115)||(42829236-42829301)
chr7 (45-118)||(20085758-20085825)
chr7 (44-89)||(29734813-29734858)
chr7 (88-128)||(145550-145590)
chr7 (45-89)||(964764-964808)
chr7 (46-89)||(15913546-15913589)
chr7 (50-89)||(29461844-29461883)
chr7 (54-89)||(45425456-45425491)
chr7 (49-119)||(1808199-1808269)
chr7 (46-117)||(17816515-17816582)
chr7 (51-89)||(23221392-23221430)
chr7 (45-87)||(28703502-28703544)
chr7 (45-123)||(29726794-29726867)
chr7 (49-115)||(44718815-44718876)
chr7 (87-128)||(5579724-5579765)
chr7 (48-89)||(8879770-8879811)
chr7 (44-117)||(10244720-10244788)
chr7 (44-89)||(16355506-16355551)
chr7 (56-89)||(19684235-19684268)
chr7 (45-119)||(20135159-20135229)
chr7 (48-89)||(24614692-24614733)
chr7 (87-128)||(27833390-27833431)
chr7 (45-89)||(34807212-34807257)
chr7 (45-118)||(35222918-35222986)
chr7 (48-89)||(35836016-35836057)
chr7 (45-119)||(42828959-42829029)
[»] chr3 (30 HSPs)
chr3 (50-121)||(10922304-10922370)
chr3 (45-123)||(7464485-7464558)
chr3 (45-89)||(7824801-7824845)
chr3 (45-89)||(7827502-7827546)
chr3 (45-89)||(7829890-7829934)
chr3 (50-89)||(12976625-12976664)
chr3 (87-128)||(11358265-11358306)
chr3 (44-89)||(38387965-38388010)
chr3 (49-89)||(29791774-29791814)
chr3 (45-89)||(31138411-31138455)
chr3 (45-89)||(32753822-32753866)
chr3 (87-123)||(34899128-34899164)
chr3 (49-89)||(48517669-48517709)
chr3 (90-126)||(49082700-49082736)
chr3 (45-93)||(53429149-53429197)
chr3 (56-123)||(1111835-1111897)
chr3 (46-89)||(37921021-37921064)
chr3 (45-128)||(38130948-38131026)
chr3 (46-89)||(46226100-46226143)
chr3 (46-117)||(5239789-5239856)
chr3 (45-119)||(7738663-7738732)
chr3 (43-89)||(33223860-33223906)
chr3 (45-119)||(51882198-51882267)
chr3 (48-89)||(2078237-2078278)
chr3 (44-89)||(13829100-13829145)
chr3 (44-89)||(18870748-18870793)
chr3 (52-89)||(25485491-25485528)
chr3 (87-128)||(25727956-25727997)
chr3 (50-119)||(35126267-35126331)
chr3 (44-89)||(48234476-48234521)
[»] chr2 (37 HSPs)
chr2 (45-128)||(29896283-29896361)
chr2 (48-123)||(31815881-31815951)
chr2 (45-85)||(17779019-17779059)
chr2 (45-126)||(14414883-14414962)
chr2 (45-127)||(27244651-27244728)
chr2 (47-89)||(27412859-27412901)
chr2 (45-123)||(29734685-29734758)
chr2 (44-89)||(6723100-6723145)
chr2 (49-118)||(25186241-25186305)
chr2 (48-123)||(2661034-2661112)
chr2 (45-89)||(3197102-3197146)
chr2 (45-89)||(7206119-7206163)
chr2 (44-128)||(10735820-10735899)
chr2 (49-89)||(13490723-13490763)
chr2 (87-123)||(18693656-18693692)
chr2 (45-89)||(24548111-24548155)
chr2 (44-84)||(34388627-34388667)
chr2 (41-89)||(42778609-42778657)
chr2 (45-89)||(44694682-44694726)
chr2 (45-88)||(3955151-3955194)
chr2 (46-89)||(7537105-7537148)
chr2 (45-119)||(15447712-15447787)
chr2 (48-123)||(20565069-20565139)
chr2 (43-89)||(2256963-2257009)
chr2 (44-89)||(16082125-16082171)
chr2 (48-123)||(19976150-19976221)
chr2 (48-89)||(1238159-1238200)
chr2 (52-121)||(5168575-5168639)
chr2 (44-89)||(13922655-13922700)
chr2 (43-128)||(24592835-24592915)
chr2 (87-128)||(27848189-27848230)
chr2 (87-128)||(29544658-29544699)
chr2 (44-89)||(30243243-30243288)
chr2 (86-127)||(35281201-35281242)
chr2 (46-87)||(35287689-35287730)
chr2 (57-90)||(39256257-39256290)
chr2 (44-89)||(40967394-40967439)
[»] chr5 (30 HSPs)
chr5 (45-127)||(7336301-7336382)
chr5 (45-89)||(40445977-40446021)
chr5 (45-123)||(32200441-32200514)
chr5 (44-89)||(4432109-4432154)
chr5 (48-85)||(31802253-31802290)
chr5 (87-123)||(13864375-13864411)
chr5 (45-89)||(18538602-18538646)
chr5 (45-85)||(20175821-20175861)
chr5 (45-89)||(28447487-28447531)
chr5 (45-89)||(34206221-34206265)
chr5 (45-128)||(6489001-6489079)
chr5 (45-88)||(9441912-9441955)
chr5 (45-128)||(15889405-15889483)
chr5 (46-89)||(17861974-17862017)
chr5 (44-95)||(26017194-26017245)
chr5 (45-128)||(34436845-34436923)
chr5 (44-119)||(40715947-40716017)
chr5 (45-128)||(4009860-4009939)
chr5 (43-89)||(8350662-8350708)
chr5 (87-121)||(20721081-20721115)
chr5 (85-123)||(40837897-40837935)
chr5 (48-85)||(7671228-7671265)
chr5 (48-89)||(8545012-8545053)
chr5 (44-89)||(11720887-11720932)
chr5 (87-128)||(22522790-22522831)
chr5 (48-89)||(23118074-23118115)
chr5 (44-89)||(28391654-28391699)
chr5 (87-128)||(31280050-31280091)
chr5 (44-89)||(37054292-37054337)
chr5 (51-116)||(38976702-38976766)
[»] chr8 (32 HSPs)
chr8 (49-126)||(1921718-1921791)
chr8 (45-89)||(7553673-7553717)
chr8 (46-89)||(28084277-28084320)
chr8 (48-89)||(1877685-1877726)
chr8 (87-128)||(12800889-12800930)
chr8 (44-89)||(17062362-17062407)
chr8 (44-89)||(17585951-17585996)
chr8 (45-86)||(17694441-17694482)
chr8 (44-89)||(37015859-37015904)
chr8 (45-85)||(5325534-5325574)
chr8 (45-89)||(6447183-6447227)
chr8 (46-89)||(7404772-7404816)
chr8 (87-123)||(18533700-18533736)
chr8 (87-123)||(23159472-23159508)
chr8 (45-89)||(32223902-32223946)
chr8 (86-117)||(15020791-15020822)
chr8 (45-123)||(11708980-11709053)
chr8 (45-119)||(13286125-13286193)
chr8 (43-89)||(13357464-13357510)
chr8 (45-123)||(19163530-19163603)
chr8 (45-123)||(27718888-27718961)
chr8 (44-89)||(11771700-11771745)
chr8 (87-128)||(12748932-12748973)
chr8 (45-90)||(17917827-17917872)
chr8 (48-89)||(19701367-19701408)
chr8 (48-89)||(31511968-31512009)
chr8 (87-128)||(32051521-32051562)
chr8 (87-128)||(32286353-32286394)
chr8 (45-119)||(34997452-34997522)
chr8 (48-89)||(42700502-42700543)
chr8 (49-90)||(43910902-43910943)
chr8 (44-89)||(44293568-44293613)
[»] chr4 (45 HSPs)
chr4 (50-89)||(6460101-6460140)
chr4 (54-89)||(49233818-49233853)
chr4 (45-123)||(12671742-12671815)
chr4 (44-127)||(36662359-36662437)
chr4 (45-87)||(55962603-55962645)
chr4 (45-86)||(21935006-21935047)
chr4 (56-89)||(24540848-24540881)
chr4 (87-123)||(8027391-8027427)
chr4 (87-123)||(11949757-11949793)
chr4 (45-89)||(12712041-12712085)
chr4 (45-113)||(16733523-16733586)
chr4 (48-99)||(18458749-18458798)
chr4 (87-123)||(19479471-19479507)
chr4 (45-89)||(20096293-20096337)
chr4 (45-117)||(20799394-20799461)
chr4 (57-89)||(24063231-24063263)
chr4 (46-119)||(29346305-29346374)
chr4 (87-127)||(43155110-43155150)
chr4 (45-117)||(43722759-43722826)
chr4 (87-127)||(44815972-44816012)
chr4 (49-89)||(44918236-44918276)
chr4 (45-128)||(9946421-9946499)
chr4 (46-89)||(14136086-14136129)
chr4 (44-127)||(14577497-14577575)
chr4 (52-115)||(17423179-17423237)
chr4 (46-89)||(23626376-23626419)
chr4 (46-89)||(45970730-45970773)
chr4 (50-89)||(50376678-50376717)
chr4 (43-89)||(2932115-2932161)
chr4 (43-89)||(18635522-18635568)
chr4 (45-123)||(21318247-21318320)
chr4 (45-123)||(22630354-22630427)
chr4 (48-119)||(32139336-32139403)
chr4 (51-89)||(40847090-40847128)
chr4 (48-89)||(6459947-6459988)
chr4 (86-123)||(6610293-6610330)
chr4 (40-89)||(13984665-13984714)
chr4 (48-89)||(17134122-17134163)
chr4 (90-123)||(21114299-21114332)
chr4 (86-123)||(23686293-23686330)
chr4 (46-75)||(34019490-34019519)
chr4 (43-88)||(42425579-42425624)
chr4 (44-89)||(50952955-50953000)
chr4 (40-85)||(51002276-51002321)
chr4 (48-89)||(54500566-54500607)
[»] scaffold0136 (1 HSPs)
scaffold0136 (58-115)||(37376-37431)
[»] scaffold0016 (1 HSPs)
scaffold0016 (45-121)||(99031-99102)
[»] scaffold0008 (1 HSPs)
scaffold0008 (45-88)||(119563-119606)
[»] scaffold0005 (1 HSPs)
scaffold0005 (44-127)||(239800-239878)
[»] scaffold0011 (1 HSPs)
scaffold0011 (45-119)||(185257-185326)
[»] scaffold0417 (1 HSPs)
scaffold0417 (87-124)||(8166-8203)
[»] scaffold0262 (1 HSPs)
scaffold0262 (41-118)||(15929-16001)
[»] scaffold0050 (1 HSPs)
scaffold0050 (46-123)||(53374-53446)


Alignment Details
Target: chr6 (Bit Score: 62; Significance: 2e-26; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 7927671 - 7927756
Alignment:
Q  22 atatgttagaatactgtccaacagtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggg 107  Q
    |||||||||||||| ||||||||||||||||||| |||  ||||||||||| ||||||||||||||||||||||||||| ||||||    
T  7927671 atatgttagaatacggtccaacagtcctcgtgagcttagttcagttgatagggacaatgcataatataatatatgcaaggtccggg 7927756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 27928176 - 27928107
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaacc 116  Q
    |||||||||||||||||||||||| |||||||||| ||||  |||||||||||||| |||||| ||||||||    
T  27928176 gtcctcgtgagtttaactcagttggtagagacaatacata--ataatatatgcaaggtccgggattcaaacc 27928107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 789 - 833
Target Start/End: Complemental strand, 7917223 - 7917179
Alignment:
Q  789 atacataatttgcatatcctcaatttttaaccttgcacctttgct 833  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  7917223 atacataatttgaatatcctcaatttttaaccttgcacctttgct 7917179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 331956 - 331909
Alignment:
Q  42 acagtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  331956 acagtcctcgtgagcttaactcagttggtagagacaatgcataatata 331909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 127
Target Start/End: Original strand, 8809300 - 8809377
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgaccatcac 127  Q
    |||||||||||||||  ||| |||||| | |||||||||||     ||||||||||||||| |||||||||||||||||||||    
T  8809300 gtcctcgtgagtttagttcaattgataaaaacaatgcataa-----tatatgcaagatccgaggttcaaaccccgaccatcac 8809377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 20480699 - 20480634
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggtt 110  Q
    |||||||||||| |||||||||||| |||  |||||||||||| ||||||||||||| |||||||||    
T  20480699 agtcctcgtgagcttaactcagttggtaggaacaatgcataat-taatatatgcaaggtccggggtt 20480634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 24373777 - 24373709
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaacccc 118  Q
    |||||||||||||||||||| ||| ||||||||||||||||     |||||||||| || ||||||||||||||    
T  24373777 gtcctcgtgagtttaactcaattggtagagacaatgcataa-----tatatgcaaggtcaggggttcaaacccc 24373709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 12440655 - 12440735
Alignment:
Q  48 ctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgaccatcacc 128  Q
    |||||||| |||||| ||||| |  ||| |||||||| ||||||||||||||| || |||||||||||| |||||| ||||    
T  12440655 ctcgtgagcttaacttagttggtttagataatgcatattataatatatgcaaggtctggggttcaaacctcgaccaccacc 12440735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 128
Target Start/End: Original strand, 13496109 - 13496188
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgaccatcacc 128  Q
    |||||||||||| |||||||||||||||   |||||||     |||||||||||||| ||||| |||||||||||||||| ||||    
T  13496109 agtcctcgtgagcttaactcagttgatatgaacaatgc-----ataatatatgcaaggtccggagttcaaaccccgaccaacacc 13496188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 89
Target Start/End: Original strand, 14552333 - 14552375
Alignment:
Q  47 cctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  14552333 cctcgtgagcttaactcagttgatagagataatgcataatata 14552375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 1918522 - 1918481
Alignment:
Q  48 ctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  1918522 ctcgtgagtttaactcagttggtatagacaatgcataatata 1918481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 7281466 - 7281421
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||||||||||| |||| ||||||||||| ||||||||    
T  7281466 agtcctcgtgagtttaactcggttggtagagacaatgtataatata 7281421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 12336394 - 12336349
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||||||||||||||| |||  ||||||||||||||||    
T  12336394 agtcctcgtgagtttaactcagttaatatggacaatgcataatata 12336349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 12412271 - 12412315
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||| |||||| ||||| ||||||||||||||||||||    
T  12412271 gtcctcgtgagcttaacttagttggtagagacaatgcataatata 12412315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 89
Target Start/End: Complemental strand, 12072 - 12033
Alignment:
Q  50 cgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  12072 cgtgagtttagctcagttgatagagataatgcataatata 12033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 89
Target Start/End: Complemental strand, 6470678 - 6470639
Alignment:
Q  50 cgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||| ||||||||||||||| |||||||||||||||||    
T  6470678 cgtgagcttaactcagttgataaagacaatgcataatata 6470639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 119
Target Start/End: Original strand, 8569703 - 8569772
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccg 119  Q
    |||| ||||||||||||||| ||| ||  ||||||||||||     |||||||||| ||||||||||||||||||    
T  8569703 gtccccgtgagtttaactcaattggtatggacaatgcataa-----tatatgcaaggtccggggttcaaaccccg 8569772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 89
Target Start/End: Original strand, 18256875 - 18256921
Alignment:
Q  43 cagtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||||| ||| |||||||||||  ||||||||||||||||    
T  18256875 cagtcctcgtgagcttagctcagttgataaggacaatgcataatata 18256921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 28957109 - 28957147
Alignment:
Q  51 gtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  28957109 gtgagtttaactcagttgataaagacattgcataatata 28957147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 2546211 - 2546252
Alignment:
Q  87 ataatatatgcaagatccggggttcaaaccccgaccatcacc 128  Q
    |||||||||||||| | |||||||||||||||||||| ||||    
T  2546211 ataatatatgcaaggtacggggttcaaaccccgaccaccacc 2546252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 19277567 - 19277612
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||  ||||||||||||||||  |||||||||||||||    
T  19277567 agtcctcgtgaacttaactcagttgataggaacaatgcataatata 19277612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 20744133 - 20744205
Alignment:
Q  46 tcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgacca 123  Q
    |||||||||| ||| |||||||| ||  ||||||||||||     |||||||||| || |||||||||||||||||||    
T  20744133 tcctcgtgagcttagctcagttggtatggacaatgcataa-----tatatgcaaggtctggggttcaaaccccgacca 20744205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 123
Target Start/End: Complemental strand, 34481441 - 34481408
Alignment:
Q  90 atatatgcaagatccggggttcaaaccccgacca 123  Q
    ||||||||||| ||||||||||||||||||||||    
T  34481441 atatatgcaaggtccggggttcaaaccccgacca 34481408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 128
Target Start/End: Complemental strand, 41950156 - 41950073
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgaccatcacc 128  Q
    ||||||||||||||| ||| ||||||| |||||||  ||||||||||||||||||| || | ||||| ||||||||||| ||||    
T  41950156 gtcctcgtgagtttagctcggttgatacagacaataaataatataatatatgcaaggtctgaggttcgaaccccgaccaccacc 41950073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 7484761 - 7484691
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaacc 116  Q
    ||||||||||| ||| ||||| || ||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  7484761 gtcctcgtgagcttagctcagctggtagagacaatgcataatat-atatatgcaaggtccgaggttcaaacc 7484691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 36672782 - 36672737
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||    
T  36672782 agtcctcatgagtttaactcagttgatagagacaatccataatata 36672737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 41573336 - 41573254
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata----atatatgcaagatccggggttcaaaccccgacca 123  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||    ||||||| ||| | |  |||||||||||||||||    
T  41573336 gtcctcgtgagtttaactcagttggtagggacaatgcataatatatgtaatatatgtaaggttcaaggttcaaaccccgacca 41573254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 15729424 - 15729468
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  15729424 gtcctcgtgagcttaactcagttggtagagacaatgcataatata 15729468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 128
Target Start/End: Complemental strand, 17139585 - 17139506
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgaccatcacc 128  Q
    |||||||||||| ||| |||||||| ||| |||||||||||||||| |     |||| |||||||||||||||||||||| ||||    
T  17139585 agtcctcgtgagcttagctcagttggtagggacaatgcataatatatt-----caaggtccggggttcaaaccccgaccaccacc 17139506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 89
Target Start/End: Complemental strand, 11242047 - 11242008
Alignment:
Q  50 cgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  11242047 cgtgagtttaactcagttgacagagacaatgcataatata 11242008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 2994788 - 2994825
Alignment:
Q  86 tataatatatgcaagatccggggttcaaaccccgacca 123  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  2994788 tataatatatgcaaggtccggggttcaaaccccgacca 2994825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 3528537 - 3528492
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||||||| ||||||||||||| |||||| ||||||||    
T  3528537 agtcctcgtgagtttagctcagttgatagaaacaatgtataatata 3528492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 8153132 - 8153173
Alignment:
Q  48 ctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  8153132 ctcgtgagtttaactcagttggtatagacaatgcataatata 8153173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 9116940 - 9116895
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||| |||||||||||||||||||||||  ||||||||||||||||    
T  9116940 agtcttcgtgagtttaactcagttgatatggacaatgcataatata 9116895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 119
Target Start/End: Original strand, 18091197 - 18091267
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccg 119  Q
    ||||||||||| |||||||||||||||| |||||||||||    ||||||| |||  |||||||||| |||||||    
T  18091197 gtcctcgtgagcttaactcagttgatagggacaatgcata----aatatatacaaagtccggggttcgaaccccg 18091267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 85
Target Start/End: Original strand, 34877668 - 34877705
Alignment:
Q  48 ctcgtgagtttaactcagttgatagagacaatgcataa 85  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  34877668 ctcgtgagtttaactcaattgatagagacaatgcataa 34877705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 44641520 - 44641565
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||||||| |||||||||||  ||||||||||||||||    
T  44641520 agtcctcgtgagtttagctcagttgatatggacaatgcataatata 44641565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 1794627 - 1794663
Alignment:
Q  87 ataatatatgcaagatccggggttcaaaccccgacca 123  Q
    |||||||||||||||||||||||||||||| ||||||    
T  1794627 ataatatatgcaagatccggggttcaaacctcgacca 1794663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 7925358 - 7925402
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||| ||| |||||||| ||||||||||||||||||||    
T  7925358 gtcctcgtgagcttagctcagttggtagagacaatgcataatata 7925402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 8269398 - 8269362
Alignment:
Q  87 ataatatatgcaagatccggggttcaaaccccgacca 123  Q
    |||||||||||||| ||||||||||||||||||||||    
T  8269398 ataatatatgcaaggtccggggttcaaaccccgacca 8269362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 11014226 - 11014293
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccc 117  Q
    ||||||||||||||| |||||||| |||||||| |||||||     |||||||||||| |||| |||||||||    
T  11014226 gtcctcgtgagtttagctcagttggtagagacagtgcataa-----tatatgcaagattcgggattcaaaccc 11014293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 12269014 - 12268978
Alignment:
Q  87 ataatatatgcaagatccggggttcaaaccccgacca 123  Q
    |||||||||||||| ||||||||||||||||||||||    
T  12269014 ataatatatgcaaggtccggggttcaaaccccgacca 12268978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 16033517 - 16033473
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||| || ||||||||||||| ||||||||||||||||    
T  16033517 gtcctcgtgagcttgactcagttgatagggacaatgcataatata 16033473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 22388242 - 22388198
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||| ||||||||| ||||||||| ||||||||||||||||    
T  22388242 gtcctcgtaagtttaacttagttgatagggacaatgcataatata 22388198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 30678880 - 30678836
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||| |||||||||||| ||| ||||||||||||||||    
T  30678880 gtcctcgtgagcttaactcagttggtagggacaatgcataatata 30678836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 33153951 - 33153903
Alignment:
Q  41 aacagtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||| ||||| |||||||||||| ||| ||||||||||||||||    
T  33153951 aacagtccttgtgagcttaactcagttggtagggacaatgcataatata 33153903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 34083700 - 34083637
Alignment:
Q  52 tgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaacc 116  Q
    |||| |||||||||||| ||| |||||||||| |||||||||||| ||| |||||||||| ||||    
T  34083700 tgagcttaactcagttggtagggacaatgcat-atataatatatgtaaggtccggggttcgaacc 34083637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 36371107 - 36371063
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||| ||| |||||||| ||||||||||||||||||||    
T  36371107 gtcctcgtgagcttagctcagttggtagagacaatgcataatata 36371063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 39916948 - 39916992
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||| ||| ||||||||||||||| ||||||||||||||||||||    
T  39916948 gtccccgtaagtttaactcagttggtagagacaatgcataatata 39916992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 41998345 - 41998389
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||    
T  41998345 gtcctcgtgagattaactcagttgatagggacaattcataatata 41998389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 43840392 - 43840352
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataa 85  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  43840392 gtcctcgtgagtttaactcagttgatatggacaatgcataa 43840352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 48131295 - 48131251
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||||||||||||||||  ||||| |||||||||||||    
T  48131295 gtcctcgtgagtttaactcagttggcagagataatgcataatata 48131251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 89
Target Start/End: Original strand, 10292935 - 10292974
Alignment:
Q  50 cgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||| |||||||||||||||| ||||||||||||||||    
T  10292935 cgtgagcttaactcagttgatagggacaatgcataatata 10292974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 27533237 - 27533315
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgaccatcacc 128  Q
    ||||||||||| |||  ||||||| ||| ||||||||||||     |||||||||| | |||||||||||||||||||| ||||    
T  27533237 gtcctcgtgagcttagatcagttggtagggacaatgcataa-----tatatgcaaggttcggggttcaaaccccgaccaccacc 27533315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 119
Target Start/End: Original strand, 34632162 - 34632232
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccg 119  Q
    |||||||||||| ||| |||||||| || ||||||||     |||||||||||||||||||| |||||||| ||||    
T  34632162 agtcctcgtgagcttagctcagttggtatagacaatg-----tataatatatgcaagatccgaggttcaaatcccg 34632232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 44220982 - 44221025
Alignment:
Q  46 tcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||| |||||| ||||||||||||||||||| ||||||    
T  44220982 tcctcgtgagcttaacttagttgatagagacaatgcacaatata 44221025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 123
Target Start/End: Original strand, 52086145 - 52086176
Alignment:
Q  92 atatgcaagatccggggttcaaaccccgacca 123  Q
    ||||||||||||||||||||||||||||||||    
T  52086145 atatgcaagatccggggttcaaaccccgacca 52086176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 2884517 - 2884471
Alignment:
Q  43 cagtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||||  |||||||||||||||  ||||||||||||||||    
T  2884517 cagtcctcgtgaccttaactcagttgatatggacaatgcataatata 2884471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 123
Target Start/End: Original strand, 18166596 - 18166669
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgacca 123  Q
    ||||||||| | ||| |||||||| || |||||||||||||     |||||||||  ||||||||||||||||||||||    
T  18166596 gtcctcgtgggcttagctcagttggtatagacaatgcataa-----tatatgcaaagtccggggttcaaaccccgacca 18166669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 123
Target Start/End: Original strand, 26010216 - 26010289
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgacca 123  Q
    ||||||||||||||| |||| ||||||| |||||||     ||||||| ||||||| | |||||||||||||| |||||    
T  26010216 gtcctcgtgagtttagctcaattgatagtgacaatg-----tataatacatgcaaggttcggggttcaaaccctgacca 26010289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 127
Target Start/End: Original strand, 26755610 - 26755687
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgaccatcac 127  Q
    ||||||||||| ||| |||||||||||  ||||||||     || ||||||||||| ||||||||||||||| || |||||||    
T  26755610 gtcctcgtgagcttagctcagttgatatggacaatgc-----attatatatgcaaggtccggggttcaaacctcggccatcac 26755687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 1091173 - 1091214
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataat 86  Q
    ||||||||||| |||||||||||| || ||||||||||||||    
T  1091173 gtcctcgtgagcttaactcagttggtatagacaatgcataat 1091214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 1864283 - 1864242
Alignment:
Q  48 ctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||| ||||||||| ||||| ||||||||||||||||||||    
T  1864283 ctcgtaagtttaacttagttggtagagacaatgcataatata 1864242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 5280626 - 5280698
Alignment:
Q  46 tcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgacca 123  Q
    |||||||||| ||||||||||||  ||||||| |||     |||||||||||||| || ||||||| |||||||||||    
T  5280626 tcctcgtgagcttaactcagttggaagagacagtgc-----ataatatatgcaaggtctggggttcgaaccccgacca 5280698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 13401608 - 13401664
Alignment:
Q  62 tcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgacca 123  Q
    ||||||||||||||||||||||||||||     || ||| | ||||||||||||||||||||    
T  13401608 tcagttgatagagacaatgcataatata-----tgtaaggttcggggttcaaaccccgacca 13401664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 114
Target Start/End: Original strand, 17434516 - 17434545
Alignment:
Q  85 atataatatatgcaagatccggggttcaaa 114  Q
    ||||||||||||||||||||||||||||||    
T  17434516 atataatatatgcaagatccggggttcaaa 17434545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 28006735 - 28006780
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||| |||| |||||||||||||| ||| |||||||||||||||||    
T  28006735 agtcatcgtaagtttaactcagttaatatagacaatgcataatata 28006780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 124
Target Start/End: Original strand, 29506819 - 29506895
Alignment:
Q  43 cagtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgaccat 124  Q
    ||||||||||||| |||||| ||||| || |||||||     | |||||||||||||| ||| |||||| ||||||||||||    
T  29506819 cagtcctcgtgagcttaacttagttggtatagacaat-----acataatatatgcaaggtccagggttcgaaccccgaccat 29506895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 31401721 - 31401676
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||| |||||||||||||||||||| | | |||||||||||||||    
T  31401721 agtccccgtgagtttaactcagttgacaaaaacaatgcataatata 31401676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 31890817 - 31890772
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||||||| |||||||| ||  ||||||||||||||||    
T  31890817 agtcctcgtgagtttagctcagttggtaaggacaatgcataatata 31890772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 32561003 - 32561040
Alignment:
Q  86 tataatatatgcaagatccggggttcaaaccccgacca 123  Q
    ||||||||||||||| ||||||||||||| ||||||||    
T  32561003 tataatatatgcaaggtccggggttcaaatcccgacca 32561040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 41142738 - 41142709
Alignment:
Q  60 actcagttgatagagacaatgcataatata 89  Q
    ||||||||||||||||||||||||||||||    
T  41142738 actcagttgatagagacaatgcataatata 41142709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 51127962 - 51127913
Alignment:
Q  40 caacagtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||| |||||||||||||| ||||||| |||  ||||||||||||||||    
T  51127962 caacaatcctcgtgagtttagctcagttaatatggacaatgcataatata 51127913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 45 - 123
Target Start/End: Original strand, 36803832 - 36803909
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgacca 123  Q
    ||||||||||| ||| |||||||| ||||||||||||||||||| || |||||||||| |||| ||||||||| |||||    
T  36803832 gtcctcgtgagcttagctcagttggtagagacaatgcataatat-atttatgcaagattcgggattcaaaccctgacca 36803909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 3948051 - 3948092
Alignment:
Q  48 ctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  3948051 ctcgtgagtttaactcagttgatagagacaatgcataatata 3948092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 46551908 - 46551847
Alignment:
Q  50 cgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttc 111  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||||| |||| |||||    
T  46551908 cgtgagtttaactcagttgataaggacaatgcataatataaaatatgcaaggtccgaggttc 46551847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 22267575 - 22267619
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  22267575 gtcctcgtgagtttaactcagttggtagagacaatgcataatata 22267619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 23147285 - 23147353
Alignment:
Q  49 tcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccg 119  Q
    ||||||||||| |||||||| ||| |||||| |||||||  ||||||||||| ||||||||||||||||||    
T  23147285 tcgtgagtttacctcagttggtagggacaatacataata--atatatgcaaggtccggggttcaaaccccg 23147353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 123
Target Start/End: Original strand, 19599139 - 19599212
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgacca 123  Q
    ||||| |||||||||||||||||| ||  ||||||||||||     |||||||||| ||||||||||||||||||||||    
T  19599139 gtcctggtgagtttaactcagttggtatggacaatgcataa-----tatatgcaaggtccggggttcaaaccccgacca 19599212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 44106623 - 44106666
Alignment:
Q  46 tcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||| |||||||||||||||||||||||||||| |||||||||    
T  44106623 tcctcctgagtttaactcagttgatagagacaatacataatata 44106666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 1285132 - 1285075
Alignment:
Q  49 tcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttc 111  Q
    ||||||||||||||||||||||||  |||||||||||     |||||||||||||||||||||    
T  1285132 tcgtgagtttaactcagttgataggaacaatgcataa-----tatatgcaagatccggggttc 1285075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 117
Target Start/End: Complemental strand, 19050486 - 19050419
Alignment:
Q  46 tcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccc 117  Q
    |||||||||| ||| | ||||||||||||||||||||||    |||||||||||  ||||||||||||||||    
T  19050486 tcctcgtgagcttagcccagttgatagagacaatgcata----aatatatgcaaagtccggggttcaaaccc 19050419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 116
Target Start/End: Original strand, 19793798 - 19793865
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaacc 116  Q
    |||||||||||||||||||||||||||  |||||||||| |||    ||||||||||| |||||||| ||||    
T  19793798 gtcctcgtgagtttaactcagttgatatggacaatgcatgata----atatgcaagattcggggttcgaacc 19793865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 89
Target Start/End: Original strand, 25246767 - 25246809
Alignment:
Q  47 cctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||||| ||||||||||| |||||||||||||||||    
T  25246767 cctcgtgagtttagctcagttgataaagacaatgcataatata 25246809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 123
Target Start/End: Original strand, 32062017 - 32062090
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgacca 123  Q
    ||||||||||| |||||||||||| |||||||||||     |||||||||||||| || |||| |||||||||| ||||    
T  32062017 gtcctcgtgagattaactcagttggtagagacaatg-----tataatatatgcaaaattcgggattcaaaccccaacca 32062090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 115
Target Start/End: Complemental strand, 42829301 - 42829236
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaac 115  Q
    ||||||||||| || ||||||||||||| ||||||||||||     |||||||||| ||||||||||||||    
T  42829301 gtcctcgtgagcttgactcagttgatagggacaatgcataa-----tatatgcaagctccggggttcaaac 42829236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 20085825 - 20085758
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaacccc 118  Q
    |||||||||||||||||||||| | || |||||||||     |||||||||||||| |||||||||||||||||    
T  20085825 gtcctcgtgagtttaactcagtcggta-agacaatgc-----ataatatatgcaaggtccggggttcaaacccc 20085758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 29734858 - 29734813
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||||||| |||||| |||||| |||||||||||||||    
T  29734858 agtcctcgtgagtttagctcagtcgatagaaacaatgcataatata 29734813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 145550 - 145590
Alignment:
Q  88 taatatatgcaagatccggggttcaaaccccgaccatcacc 128  Q
    ||||||||||||| |||||||||||||||||||||| ||||    
T  145550 taatatatgcaaggtccggggttcaaaccccgaccaccacc 145590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 964808 - 964764
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||| |||||||||| |||||| |||||||||||||||    
T  964808 gtcctcgtgagcttaactcagtcgatagaaacaatgcataatata 964764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 15913546 - 15913589
Alignment:
Q  46 tcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||| ||||| |||||||||||| ||||||||||||||||||||    
T  15913546 tcctagtgagattaactcagttgctagagacaatgcataatata 15913589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 89
Target Start/End: Complemental strand, 29461883 - 29461844
Alignment:
Q  50 cgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||||||||||| ||| ||||||||||||||||    
T  29461883 cgtgagtttaactcagttggtagggacaatgcataatata 29461844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 89
Target Start/End: Original strand, 45425456 - 45425491
Alignment:
Q  54 agtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||||||||| |||||||||||||||||    
T  45425456 agtttaactcagttgataaagacaatgcataatata 45425491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 1808199 - 1808269
Alignment:
Q  49 tcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccg 119  Q
    ||||||| ||| ||||||||  || |||||||||||  |||||||||||||| |||| ||||| |||||||    
T  1808199 tcgtgagcttagctcagttggcagtgacaatgcatatcataatatatgcaagttccgaggttcgaaccccg 1808269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 17816515 - 17816582
Alignment:
Q  46 tcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccc 117  Q
    |||||||||| ||| | ||||||||||||||||||||||    |||||||||||  |||||||||| |||||    
T  17816515 tcctcgtgagcttagcccagttgatagagacaatgcata----aatatatgcaaagtccggggttcgaaccc 17816582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 23221392 - 23221430
Alignment:
Q  51 gtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||| |||||||||||| ||||||||||||||||||||    
T  23221392 gtgagcttaactcagttggtagagacaatgcataatata 23221430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 28703502 - 28703544
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataata 87  Q
    ||||||||||||||| |||||||| || |||||||||||||||    
T  28703502 gtcctcgtgagtttagctcagttggtaaagacaatgcataata 28703544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 123
Target Start/End: Original strand, 29726794 - 29726867
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgacca 123  Q
    ||||||||||| ||||||||||||| |   ||||||     ||||||||||||||| | ||||||||||||||||||||    
T  29726794 gtcctcgtgagcttaactcagttgacatgaacaatg-----tataatatatgcaaggttcggggttcaaaccccgacca 29726867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 115
Target Start/End: Complemental strand, 44718876 - 44718815
Alignment:
Q  49 tcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaac 115  Q
    |||||||||||||||| |||||| | |||||     |||||||||||||||||| ||||||||||||    
T  44718876 tcgtgagtttaactcaattgatataaacaat-----atataatatatgcaagattcggggttcaaac 44718815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 5579724 - 5579765
Alignment:
Q  87 ataatatatgcaagatccggggttcaaaccccgaccatcacc 128  Q
    |||||||||||||| || ||||||||||||||||||| ||||    
T  5579724 ataatatatgcaaggtctggggttcaaaccccgaccaccacc 5579765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 8879811 - 8879770
Alignment:
Q  48 ctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||| |||||||||||| || |||||||||||||||||    
T  8879811 ctcgtgagcttaactcagttggtatagacaatgcataatata 8879770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 10244720 - 10244788
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccc 117  Q
    |||||||||||| ||| |||||||| ||  ||||||||||||     |||||||||| ||||||||||||||||    
T  10244720 agtcctcgtgagcttagctcagttggtatggacaatgcataa-----tatatgcaaggtccggggttcaaaccc 10244788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 16355506 - 16355551
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||| |||||||||||| |||||||| || ||||||||    
T  16355506 agtcctcgtgagcttaactcagttggtagagacattgtataatata 16355551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 89
Target Start/End: Complemental strand, 19684268 - 19684235
Alignment:
Q  56 tttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||||||| |||||||||||||||||    
T  19684268 tttaactcagttgatatagacaatgcataatata 19684235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 119
Target Start/End: Complemental strand, 20135229 - 20135159
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccg 119  Q
    ||||||||||| ||| ||||||||||| |||||||| |||    |||||||||||| ||| |||||| |||||||    
T  20135229 gtcctcgtgagcttagctcagttgataaagacaatgtata----aatatatgcaaggtcccgggttcgaaccccg 20135159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 24614692 - 24614733
Alignment:
Q  48 ctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||||||||||||||||  | |||||||||||||    
T  24614692 ctcgtgagtttaactcagttgataggaataatgcataatata 24614733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 27833431 - 27833390
Alignment:
Q  87 ataatatatgcaagatccggggttcaaaccccgaccatcacc 128  Q
    |||||||||| ||| |||||||||||||||||||||| ||||    
T  27833431 ataatatatgtaaggtccggggttcaaaccccgaccaccacc 27833390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 34807212 - 34807257
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagag-acaatgcataatata 89  Q
    ||||||||||||||| ||||||||||| || |||||||||||||||    
T  34807212 gtcctcgtgagtttagctcagttgataaagaacaatgcataatata 34807257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 35222918 - 35222986
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaacccc 118  Q
    |||||||||||||||  ||||||||||| ||||||||     || ||||||||||| || ||||||||||||||    
T  35222918 gtcctcgtgagtttaggtcagttgatagggacaatgc-----atgatatatgcaaggtctggggttcaaacccc 35222986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 35836016 - 35836057
Alignment:
Q  48 ctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||| ||||||| |||||||||||||||||||||||| ||||    
T  35836016 ctcgcgagtttagctcagttgatagagacaatgcatagtata 35836057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 119
Target Start/End: Complemental strand, 42829029 - 42828959
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccg 119  Q
    ||||||||||||||||||||| ||||||  ||||| ||||    ||||||||| | ||||||||||| |||||||    
T  42829029 gtcctcgtgagtttaactcagatgataggaacaattcata----aatatatgccaaatccggggttcgaaccccg 42828959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 10922370 - 10922304
Alignment:
Q  50 cgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgac 121  Q
    |||||| |||||||||||| ||| ||||||||||||||||     |||||||||||||||||||||||||||    
T  10922370 cgtgagcttaactcagttggtagggacaatgcataatata-----tgcaagatccggggttcaaaccccgac 10922304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 7464558 - 7464485
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgacca 123  Q
    ||||||||||| |||||||||||| ||| ||||||||||||||||     || ||| ||||||||||||||||||||||    
T  7464558 gtcctcgtgagcttaactcagttggtagggacaatgcataatata-----tgtaaggtccggggttcaaaccccgacca 7464485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 7824801 - 7824845
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||    
T  7824801 gtcctcgtgagtttaactcagttgatatagacaatacataatata 7824845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 7827502 - 7827546
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||||||||||||||||||  ||||||||||||||||    
T  7827502 gtcctcgtgagtttaactcagttgatatggacaatgcataatata 7827546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 7829890 - 7829934
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||||||||||||||||||  ||||||||||||||||    
T  7829890 gtcctcgtgagtttaactcagttgatatggacaatgcataatata 7829934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 89
Target Start/End: Complemental strand, 12976664 - 12976625
Alignment:
Q  50 cgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  12976664 cgtgagtttaactcagttgatagggacaatgcataatata 12976625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 11358265 - 11358306
Alignment:
Q  87 ataatatatgcaagatccggggttcaaaccccgaccatcacc 128  Q
    ||||||||||||||||||||||||||||||||| ||| ||||    
T  11358265 ataatatatgcaagatccggggttcaaaccccggccaccacc 11358306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 38387965 - 38388010
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||| ||| |||||||||||| ||||||||||||||||    
T  38387965 agtcctcgtgagcttagctcagttgatagtgacaatgcataatata 38388010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 89
Target Start/End: Original strand, 29791774 - 29791814
Alignment:
Q  49 tcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||||||||||||||||| ||||| |||||||||    
T  29791774 tcgtgagtttaactcagttgatagaaacaatacataatata 29791814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 31138411 - 31138455
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||| || ||| |||||||||||||||||||||||||||||    
T  31138411 gtcctcgtaagcttatctcagttgatagagacaatgcataatata 31138455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 32753822 - 32753866
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||| || ||||||||||||| ||||||||||||||||    
T  32753822 gtcctcgtgagcttgactcagttgatagggacaatgcataatata 32753866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 34899128 - 34899164
Alignment:
Q  87 ataatatatgcaagatccggggttcaaaccccgacca 123  Q
    |||||||||||||| ||||||||||||||||||||||    
T  34899128 ataatatatgcaaggtccggggttcaaaccccgacca 34899164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 89
Target Start/End: Original strand, 48517669 - 48517709
Alignment:
Q  49 tcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  48517669 tcgtgagtttaactcagttgataggaacaatgcataatata 48517709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 126
Target Start/End: Complemental strand, 49082736 - 49082700
Alignment:
Q  90 atatatgcaagatccggggttcaaaccccgaccatca 126  Q
    ||||||||||| |||||||||||||||||||||||||    
T  49082736 atatatgcaaggtccggggttcaaaccccgaccatca 49082700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 53429149 - 53429197
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatat 93  Q
    ||||||||||||||| |||||||| || |||||||||||||||| ||||    
T  53429149 gtcctcgtgagtttagctcagttggtatagacaatgcataatattatat 53429197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 123
Target Start/End: Complemental strand, 1111897 - 1111835
Alignment:
Q  56 tttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgacca 123  Q
    ||||||||||||||||| ||||||     | |||||||||||||| || |||||||||||||||||||    
T  1111897 tttaactcagttgatagggacaat-----acataatatatgcaaggtctggggttcaaaccccgacca 1111835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 37921064 - 37921021
Alignment:
Q  46 tcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||||| |||||||||||| || |||||||||||||    
T  37921064 tcctcgtgagtttagctcagttgatagggataatgcataatata 37921021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 128
Target Start/End: Complemental strand, 38131026 - 38130948
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgaccatcacc 128  Q
    ||||| ||||| |||||||||||| ||  ||||||||||||||||     |||||| |||||||||||||||||| ||| ||||    
T  38131026 gtccttgtgagcttaactcagttggtatggacaatgcataatata-----tgcaaggtccggggttcaaaccccggccaccacc 38130948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 46226143 - 46226100
Alignment:
Q  46 tcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||||||||||| ||| ||| ||||||||||||||||    
T  46226143 tcctcgtgagtttaactcaattggtagggacaatgcataatata 46226100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 5239789 - 5239856
Alignment:
Q  46 tcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccc 117  Q
    |||||||||| ||| | ||||||||||||||||||||||    |||||||||||  |||||||||| |||||    
T  5239789 tcctcgtgagcttagcccagttgatagagacaatgcata----aatatatgcaaagtccggggttcgaaccc 5239856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 119
Target Start/End: Original strand, 7738663 - 7738732
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccg 119  Q
    ||||||||||| |||||||||||| ||| ||||||||     |||| ||||||||| |||||||||||| |||||    
T  7738663 gtcctcgtgagcttaactcagttggtagggacaatgc-----ataaaatatgcaaggtccggggttcaagccccg 7738732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 89
Target Start/End: Original strand, 33223860 - 33223906
Alignment:
Q  43 cagtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||||| ||| |||||||| |||| |||||||||||||||    
T  33223860 cagtcctcgtgagcttagctcagttggtagaaacaatgcataatata 33223906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 119
Target Start/End: Complemental strand, 51882267 - 51882198
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccg 119  Q
    |||| |||||| |||||||||||| ||  ||||||||||||||||     |||||||||| ||||||||||||||    
T  51882267 gtccccgtgagcttaactcagttggtatggacaatgcataatata-----tgcaagatccagggttcaaaccccg 51882198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 2078237 - 2078278
Alignment:
Q  48 ctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||  |||||||||||| ||||||||||||||||||||    
T  2078237 ctcgtgaacttaactcagttggtagagacaatgcataatata 2078278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 13829145 - 13829100
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||| |||||||||||||||||||  ||| ||||||||||||||||    
T  13829145 agtcatcgtgagtttaactcagtttttagggacaatgcataatata 13829100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 18870793 - 18870748
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||| ||| |||||||| ||| ||||||||||||||||    
T  18870793 agtcctcgtgagcttagctcagttggtagggacaatgcataatata 18870748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 25485528 - 25485491
Alignment:
Q  52 tgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  25485528 tgagtttaactcaattgatatagacaatgcataatata 25485491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 25727997 - 25727956
Alignment:
Q  87 ataatatatgcaagatccggggttcaaaccccgaccatcacc 128  Q
    |||||||||||||| ||||||||||||| |||||||| ||||    
T  25727997 ataatatatgcaaggtccggggttcaaatcccgaccaccacc 25727956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 35126331 - 35126267
Alignment:
Q  50 cgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccg 119  Q
    ||||||||||||||||||| ||| || |||||||||     ||||||||||||| |||||||||| ||||    
T  35126331 cgtgagtttaactcagttggtagggataatgcataa-----tatatgcaagatctggggttcaaatcccg 35126267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 48234521 - 48234476
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||| |||||||||||||||| | | ||||||||||||||||    
T  48234521 agtcctcgagagtttaactcagttggtggggacaatgcataatata 48234476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 128
Target Start/End: Complemental strand, 29896361 - 29896283
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgaccatcacc 128  Q
    |||||||||||||||| |||||||||||| |||||||||||||||     |||||| |  ||||||||||||||||||| ||||    
T  29896361 gtcctcgtgagtttaattcagttgatagaaacaatgcataatata-----tgcaaggtttggggttcaaaccccgaccaccacc 29896283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 123
Target Start/End: Complemental strand, 31815951 - 31815881
Alignment:
Q  48 ctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgacca 123  Q
    |||||||| |||||||||||| ||| ||||||||||||||||     |||||| ||||||||||||||||||||||    
T  31815951 ctcgtgagcttaactcagttggtagggacaatgcataatata-----tgcaaggtccggggttcaaaccccgacca 31815881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 17779059 - 17779019
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataa 85  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  17779059 gtcctcgtgagtttaactcagttggtagagacaatgcataa 17779019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 14414962 - 14414883
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgaccatca 126  Q
    ||||||||||| |||||||||||| ||  |||||||||||  |||||||||| ||| | || ||||||||| ||||||||||    
T  14414962 gtcctcgtgagcttaactcagttggtatggacaatgcata--ataatatatgtaaggttcgaggttcaaactccgaccatca 14414883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 127
Target Start/End: Original strand, 27244651 - 27244728
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgaccatcac 127  Q
    ||||||||||| ||| |||||||||||| ||||||||||||     |||||||||| ||  ||||||||| ||||||||||||    
T  27244651 gtcctcgtgagcttagctcagttgatagggacaatgcataa-----tatatgcaaggtctagggttcaaagcccgaccatcac 27244728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 89
Target Start/End: Complemental strand, 27412901 - 27412859
Alignment:
Q  47 cctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||| |||||||||||| ||||||||||||||||||||    
T  27412901 cctcgtgagcttaactcagttggtagagacaatgcataatata 27412859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 123
Target Start/End: Original strand, 29734685 - 29734758
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgacca 123  Q
    ||||| ||||||||| |||||||||||  ||||||||     |||||||||||||| |||| |||||||||||||||||    
T  29734685 gtccttgtgagtttagctcagttgatatggacaatgc-----ataatatatgcaaggtccgtggttcaaaccccgacca 29734758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 6723145 - 6723100
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||||    
T  6723145 agtcctcgtgagtttaactcagttgatatggacaatgtataatata 6723100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 25186305 - 25186241
Alignment:
Q  49 tcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaacccc 118  Q
    ||||||||||| |||||||||||  ||||||||||||     |||||||||| |||||||||||||||||    
T  25186305 tcgtgagtttagctcagttgatatggacaatgcataa-----tatatgcaaggtccggggttcaaacccc 25186241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 123
Target Start/End: Complemental strand, 2661112 - 2661034
Alignment:
Q  48 ctcgtgagtttaactcagttgatagagacaatgcataatata---atatatgcaagatccggggttcaaaccccgacca 123  Q
    |||||||| |||||||||||| ||  ||||||||||||||||   ||||||||||| |||| ||||| |||||| ||||    
T  2661112 ctcgtgagcttaactcagttggtaaggacaatgcataatatatatatatatgcaaggtccgaggttcgaaccccaacca 2661034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 3197146 - 3197102
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||||||| |||||||| ||| ||||||||||||||||    
T  3197146 gtcctcgtgagtttagctcagttggtagggacaatgcataatata 3197102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 7206119 - 7206163
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||| ||| |||||||| ||||||||||||||||||||    
T  7206119 gtcctcgtgagcttagctcagttggtagagacaatgcataatata 7206163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 128
Target Start/End: Complemental strand, 10735899 - 10735820
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgaccatcacc 128  Q
    |||||||||||| ||| |||||||| ||| ||| ||||||||||||     |||||| |||||||||||||||||| ||| ||||    
T  10735899 agtcctcgtgagcttagctcagttggtagggacgatgcataatata-----tgcaaggtccggggttcaaaccccggccaccacc 10735820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 89
Target Start/End: Original strand, 13490723 - 13490763
Alignment:
Q  49 tcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||| |||||||||||||||||||| ||||||||    
T  13490723 tcgtgagtttagctcagttgatagagacaatgtataatata 13490763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 18693692 - 18693656
Alignment:
Q  87 ataatatatgcaagatccggggttcaaaccccgacca 123  Q
    |||||||||||||||||| ||||||||||||||||||    
T  18693692 ataatatatgcaagatccagggttcaaaccccgacca 18693656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 24548111 - 24548155
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||||||||||| ||| || |||||||||||||||||    
T  24548111 gtcctcgtgagtttaactcaattggtatagacaatgcataatata 24548155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 34388627 - 34388667
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcata 84  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  34388627 agtcctcgtgagtttaactcagttgatagagatagtgcata 34388667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 42778609 - 42778657
Alignment:
Q  41 aacagtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||| ||||||||||||||||| ||  ||||||||||||||||    
T  42778609 aacagtcctcatgagtttaactcagttggtaaggacaatgcataatata 42778657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 44694682 - 44694726
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||  ||||||||||||||| |||||||||||||||||    
T  44694682 gtcctcgtgaacttaactcagttgatatagacaatgcataatata 44694726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 3955194 - 3955151
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatat 88  Q
    |||| ||||||||||||| | |||||||||||||||||||||||    
T  3955194 gtccccgtgagtttaactaaattgatagagacaatgcataatat 3955151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 7537105 - 7537148
Alignment:
Q  46 tcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||| ||||||||||||||||  |||||||||||||||    
T  7537105 tcctcgtgagattaactcagttgataggaacaatgcataatata 7537148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 119
Target Start/End: Complemental strand, 15447787 - 15447712
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcata-atataatatatgcaagatccggggttcaaaccccg 119  Q
    ||||||||||||||| |||||||| || ||||||| ||||   |||||||||||||| || || ||||||||||||    
T  15447787 gtcctcgtgagtttagctcagttggtatagacaatacatatgcataatatatgcaaggtctggagttcaaaccccg 15447712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 123
Target Start/End: Complemental strand, 20565139 - 20565069
Alignment:
Q  48 ctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgacca 123  Q
    |||||||| ||| |||||||| ||| ||||||||||||||||     |||||| ||||||||||||||||| ||||    
T  20565139 ctcgtgagcttagctcagttggtagggacaatgcataatata-----tgcaaggtccggggttcaaaccccaacca 20565069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 89
Target Start/End: Original strand, 2256963 - 2257009
Alignment:
Q  43 cagtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||||| |||||||||||| ||  ||||||||||||||||    
T  2256963 cagtcctcgtgagcttaactcagttggtatggacaatgcataatata 2257009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 16082125 - 16082171
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagac-aatgcataatata 89  Q
    ||||||||||||||||||||| |||||| |||| |||||||||||||    
T  16082125 agtcctcgtgagtttaactcaattgataaagacaaatgcataatata 16082171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 19976150 - 19976221
Alignment:
Q  48 ctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgacca 123  Q
    |||||||||||| |||||||| ||  ||||||||||||||    ||||||||| |||||||||| |||| ||||||    
T  19976150 ctcgtgagtttagctcagttggtatggacaatgcataata----atatgcaaggtccggggttcgaacctcgacca 19976221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 1238159 - 1238200
Alignment:
Q  48 ctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||| |||||||| ||||||| ||||||||||||||||    
T  1238159 ctcgtgagcttaactcaattgatagggacaatgcataatata 1238200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 5168639 - 5168575
Alignment:
Q  52 tgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgac 121  Q
    |||| |||||||||||||||| || |||||||||||||     |||||| | ||||||||||||||||||    
T  5168639 tgagcttaactcagttgatagggataatgcataatata-----tgcaaggttcggggttcaaaccccgac 5168575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 13922700 - 13922655
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||| ||||||| |||||||||||| ||| ||||||||||||||||    
T  13922700 agtcatcgtgagcttaactcagttggtagggacaatgcataatata 13922655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 128
Target Start/End: Complemental strand, 24592915 - 24592835
Alignment:
Q  43 cagtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgaccatcacc 128  Q
    ||||||||||||  ||| |||||||| ||| ||||||||||||     |||||||||| || ||||||||||||||| ||| ||||    
T  24592915 cagtcctcgtgaacttagctcagttggtagggacaatgcataa-----tatatgcaaggtctggggttcaaaccccggccaccacc 24592835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 27848189 - 27848230
Alignment:
Q  87 ataatatatgcaagatccggggttcaaaccccgaccatcacc 128  Q
    |||||||||||||| |||||||||||||||||| ||| ||||    
T  27848189 ataatatatgcaaggtccggggttcaaaccccggccaccacc 27848230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 29544658 - 29544699
Alignment:
Q  87 ataatatatgcaagatccggggttcaaaccccgaccatcacc 128  Q
    |||||||||||||| |||||||||||||||||| ||| ||||    
T  29544658 ataatatatgcaaggtccggggttcaaaccccggccaccacc 29544699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 30243243 - 30243288
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||  ||| |||||||| ||||||||||||||||||||    
T  30243243 agtcctcgtgaacttagctcagttggtagagacaatgcataatata 30243288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 35281242 - 35281201
Alignment:
Q  86 tataatatatgcaagatccggggttcaaaccccgaccatcac 127  Q
    ||||||||||||||| | || |||||||||||||||||||||    
T  35281242 tataatatatgcaaggttcgaggttcaaaccccgaccatcac 35281201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 35287730 - 35287689
Alignment:
Q  46 tcctcgtgagtttaactcagttgatagagacaatgcataata 87  Q
    |||||||||||||  |||||||||||| ||||||||||||||    
T  35287730 tcctcgtgagtttggctcagttgatagggacaatgcataata 35287689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 90
Target Start/End: Complemental strand, 39256290 - 39256257
Alignment:
Q  57 ttaactcagttgatagagacaatgcataatataa 90  Q
    |||||||||||| |||||||||||||||||||||    
T  39256290 ttaactcagttggtagagacaatgcataatataa 39256257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 40967439 - 40967394
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||| ||||||| |||||||||||||||  ||||||||||||||||    
T  40967439 agtcatcgtgagcttaactcagttgataaggacaatgcataatata 40967394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.000000000001; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 127
Target Start/End: Complemental strand, 7336382 - 7336301
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgaccatcac 127  Q
    ||||||||||| ||| ||||||||||||  ||||||||||| |||||||||| ||| ||||| ||| ||||||| ||||||||    
T  7336382 gtcctcgtgagcttagctcagttgataggaacaatgcataa-ataatatatgtaaggtccggagtttaaaccccaaccatcac 7336301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 40445977 - 40446021
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||||||||||||||||||  ||||||||||||||||    
T  40445977 gtcctcgtgagtttaactcagttgataaggacaatgcataatata 40446021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 32200514 - 32200441
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgacca 123  Q
    ||||||||||| ||| ||||||||| || ||||||||||||||||     |||||| |||||||||||| |||||||||    
T  32200514 gtcctcgtgagcttagctcagttgacagggacaatgcataatata-----tgcaaggtccggggttcaagccccgacca 32200441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 4432109 - 4432154
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||||    
T  4432109 agtcctcgtaagtttaactcagttgataaggacaatgcataatata 4432154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 31802290 - 31802253
Alignment:
Q  48 ctcgtgagtttaactcagttgatagagacaatgcataa 85  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  31802290 ctcgtgagtttaactcagttgatagagacgatgcataa 31802253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 13864375 - 13864411
Alignment:
Q  87 ataatatatgcaagatccggggttcaaaccccgacca 123  Q
    |||||||||||||| ||||||||||||||||||||||    
T  13864375 ataatatatgcaaggtccggggttcaaaccccgacca 13864411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 18538602 - 18538646
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||||||| || ||||| ||||||||||||||||||||    
T  18538602 gtcctcgtgagtttagctaagttggtagagacaatgcataatata 18538646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 20175821 - 20175861
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataa 85  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  20175821 gtcctcgtgagcttaactcagttgttagagacaatgcataa 20175861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 28447487 - 28447531
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||||||||||||||  ||| ||||||||||||||||    
T  28447487 gtcctcgtgagtttaactcagttagtagggacaatgcataatata 28447531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 34206221 - 34206265
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||| ||||||||||||||||||| || |||||||||||||||||    
T  34206221 gtccccgtgagtttaactcagttggtaaagacaatgcataatata 34206265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 6489001 - 6489079
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgaccatcacc 128  Q
    ||||||||||| ||| |||||||| ||| ||||||||     |||||||||||||| || ||||||||||||||| ||| ||||    
T  6489001 gtcctcgtgagcttagctcagttggtagggacaatgc-----ataatatatgcaaggtctggggttcaaaccccggccaccacc 6489079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 9441912 - 9441955
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatat 88  Q
    |||||||| || |||||||||||||||||||||||| |||||||    
T  9441912 gtcctcgtaagcttaactcagttgatagagacaatgtataatat 9441955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 15889405 - 15889483
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgaccatcacc 128  Q
    ||||||||||| ||| |||||||| ||| ||||||||||||     |||||||||| ||  |||||||||||||||||| ||||    
T  15889405 gtcctcgtgagcttagctcagttggtagggacaatgcataa-----tatatgcaaggtctagggttcaaaccccgaccaccacc 15889483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 17861974 - 17862017
Alignment:
Q  46 tcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||||| |||||||| ||| ||||||||||||||||    
T  17861974 tcctcgtgagtttagctcagttggtagggacaatgcataatata 17862017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 26017245 - 26017194
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatataatatat 95  Q
    |||||||||||||||| |||||||| || ||| ||||||||||||| |||||    
T  26017245 agtcctcgtgagtttatctcagttggtaaagataatgcataatatagtatat 26017194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 34436845 - 34436923
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgaccatcacc 128  Q
    ||||||||||| ||| |||||||| ||| ||||||||     ||||||||||||||  ||||||||||||||||| ||| ||||    
T  34436845 gtcctcgtgagcttagctcagttggtagggacaatgc-----ataatatatgcaagggccggggttcaaaccccgcccaccacc 34436923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 40716017 - 40715947
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccg 119  Q
    |||||||||||| ||| |||| ||||||  ||||||||||||||||     |||||| ||||||||||||||||||    
T  40716017 agtcctcgtgagcttagctcaattgatatggacaatgcataatata-----tgcaaggtccggggttcaaaccccg 40715947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 4009860 - 4009939
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgaccatcacc 128  Q
    ||||||||||| ||| |||||||| ||  ||||||||||    |||||||||||||  ||||||||||||||||| ||| ||||    
T  4009860 gtcctcgtgagcttagctcagttggtaaggacaatgcat----taatatatgcaagggccggggttcaaaccccggccaccacc 4009939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 89
Target Start/End: Original strand, 8350662 - 8350708
Alignment:
Q  43 cagtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||||||||||||||||||  |  ||||||||||||||||    
T  8350662 cagtcctcgtgagtttaactcagttggcatggacaatgcataatata 8350708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 121
Target Start/End: Original strand, 20721081 - 20721115
Alignment:
Q  87 ataatatatgcaagatccggggttcaaaccccgac 121  Q
    |||||||||||||| ||||||||||||||||||||    
T  20721081 ataatatatgcaaggtccggggttcaaaccccgac 20721115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 123
Target Start/End: Complemental strand, 40837935 - 40837897
Alignment:
Q  85 atataatatatgcaagatccggggttcaaaccccgacca 123  Q
    |||||| ||||||||| ||||||||||||||||||||||    
T  40837935 atataaaatatgcaaggtccggggttcaaaccccgacca 40837897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 85
Target Start/End: Original strand, 7671228 - 7671265
Alignment:
Q  48 ctcgtgagtttaactcagttgatagagacaatgcataa 85  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  7671228 ctcgtgagtttaactcagttgatagaaacaatgtataa 7671265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 8545053 - 8545012
Alignment:
Q  48 ctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||| |||||||||||||||  ||||||||||||||||    
T  8545053 ctcgtgagcttaactcagttgataaggacaatgcataatata 8545012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 11720887 - 11720932
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||| ||||| |||||||||||| ||| ||||||||||||||||    
T  11720887 agtccttgtgagcttaactcagttggtagggacaatgcataatata 11720932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 22522831 - 22522790
Alignment:
Q  87 ataatatatgcaagatccggggttcaaaccccgaccatcacc 128  Q
    |||||||||||||| |||||||||||||||||| ||| ||||    
T  22522831 ataatatatgcaaggtccggggttcaaaccccggccaccacc 22522790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 23118115 - 23118074
Alignment:
Q  48 ctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||| |||||||||||||||  ||||||||||||||||    
T  23118115 ctcgtgagcttaactcagttgataaggacaatgcataatata 23118074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 28391699 - 28391654
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||||||| ||||||||||||| | |||| ||||||||    
T  28391699 agtcctcgtgagtttagctcagttgatagaaataatgtataatata 28391654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 31280050 - 31280091
Alignment:
Q  87 ataatatatgcaagatccggggttcaaaccccgaccatcacc 128  Q
    ||||||||||||| |||||||||||||||| |||||| ||||    
T  31280050 ataatatatgcaatatccggggttcaaacctcgaccaccacc 31280091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 37054337 - 37054292
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||| |||||||| |||||||| ||| ||||||||||||||||    
T  37054337 agtcctcatgagtttagctcagttggtagggacaatgcataatata 37054292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 38976766 - 38976702
Alignment:
Q  51 gtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaacc 116  Q
    |||| ||||||||| ||||||  ||  ||||||| | |||||||||||||||||||||||||||||    
T  38976766 gtgaatttaactcaattgatatggatgatgcatatt-taatatatgcaagatccggggttcaaacc 38976702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000002; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 1921718 - 1921791
Alignment:
Q  49 tcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgaccatca 126  Q
    ||||||||||| || ||||||||| ||||||||||||    ||||||||||| |||||||||| |||||||| |||||    
T  1921718 tcgtgagtttagctaagttgatagcgacaatgcataa----atatatgcaaggtccggggttcgaaccccgaacatca 1921791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 7553673 - 7553717
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||    
T  7553673 gtcctcgtgagtttaactcagttggtagggacaatgcataatata 7553717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 28084277 - 28084320
Alignment:
Q  46 tcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||| |||||||||||||||||||||||| ||||||||    
T  28084277 tcctcgtgagcttaactcagttgatagagacaatgaataatata 28084320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 1877726 - 1877685
Alignment:
Q  48 ctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||| ||||||||||||||| |||||||||||||||||    
T  1877726 ctcgtgagcttaactcagttgatatagacaatgcataatata 1877685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 12800930 - 12800889
Alignment:
Q  87 ataatatatgcaagatccggggttcaaaccccgaccatcacc 128  Q
    |||||||||||||| |||||||||||||||||||||| ||||    
T  12800930 ataatatatgcaaggtccggggttcaaaccccgaccaccacc 12800889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 17062407 - 17062362
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||| ||||||||||||||| ||||||| |||||||||    
T  17062407 agtcctcgtgagcttaactcagttgatatagacaatacataatata 17062362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 17585951 - 17585996
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||| ||||||||||||||| ||||||| |||||||||    
T  17585951 agtcctcgtgagcttaactcagttgatatagacaatacataatata 17585996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 17694482 - 17694441
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataat 86  Q
    |||||||||||||||||||||||| || ||||||||||||||    
T  17694482 gtcctcgtgagtttaactcagttgttaaagacaatgcataat 17694441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 37015904 - 37015859
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||| ||| |||||||| ||||||||||||||||||||    
T  37015904 agtcctcgtgagcttagctcagttggtagagacaatgcataatata 37015859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 5325574 - 5325534
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataa 85  Q
    ||||||||||||||| |||||||||| ||||||||||||||    
T  5325574 gtcctcgtgagtttagctcagttgattgagacaatgcataa 5325534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 6447183 - 6447227
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||    
T  6447183 gtcctcgtgagtttaactcagttggtatggacaatgcataatata 6447227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 7404772 - 7404816
Alignment:
Q  46 tcctcgtgagtttaactcagttgatagagac-aatgcataatata 89  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||    
T  7404772 tcctcgtgagtttaactcagttggtagagacaaatgcataatata 7404816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 18533700 - 18533736
Alignment:
Q  87 ataatatatgcaagatccggggttcaaaccccgacca 123  Q
    |||||||||||||||||||||||||||||||| ||||    
T  18533700 ataatatatgcaagatccggggttcaaaccccaacca 18533736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 23159472 - 23159508
Alignment:
Q  87 ataatatatgcaagatccggggttcaaaccccgacca 123  Q
    |||||||||||||||| ||||||||||||||||||||    
T  23159472 ataatatatgcaagattcggggttcaaaccccgacca 23159508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 32223946 - 32223902
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||| |||  ||||||||||||||||||||||||||||    
T  32223946 gtcctcgtgagcttagttcagttgatagagacaatgcataatata 32223902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 117
Target Start/End: Original strand, 15020791 - 15020822
Alignment:
Q  86 tataatatatgcaagatccggggttcaaaccc 117  Q
    ||||||||||||||||||||||||||||||||    
T  15020791 tataatatatgcaagatccggggttcaaaccc 15020822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 123
Target Start/End: Original strand, 11708980 - 11709053
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgacca 123  Q
    ||||||||||| ||| |||||||| ||| ||||||||     |||||||||||||| ||||  ||||||||||||||||    
T  11708980 gtcctcgtgagcttagctcagttggtagggacaatgc-----ataatatatgcaaggtccgaagttcaaaccccgacca 11709053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 119
Target Start/End: Original strand, 13286125 - 13286193
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccg 119  Q
    ||||||||||| ||| |||||||| || |||||||||     |||||||||||||||||| ||||||||||||||    
T  13286125 gtcctcgtgagcttagctcagttggtatagacaatgc-----ataatatatgcaagatcc-gggttcaaaccccg 13286193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 13357510 - 13357464
Alignment:
Q  43 cagtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||||| |||||||||||| ||  ||||||||||||||||    
T  13357510 cagtcctcgtgagcttaactcagttggtatggacaatgcataatata 13357464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 19163603 - 19163530
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgacca 123  Q
    ||||||||||| ||| |||||||| ||  ||||||||||||| ||     |||||| ||||||||||||||||||||||    
T  19163603 gtcctcgtgagcttagctcagttggtatggacaatgcataattta-----tgcaaggtccggggttcaaaccccgacca 19163530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 27718961 - 27718888
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgacca 123  Q
    ||||||||||| ||| |||||||||||  ||||||||||||     |||||||||| ||||| |||||||| |||||||    
T  27718961 gtcctcgtgagcttagctcagttgatatggacaatgcataa-----tatatgcaaggtccggagttcaaactccgacca 27718888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 11771700 - 11771745
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||| || ||| ||||||||||||||||||| |||||||||    
T  11771700 agtcctcgtaagcttagctcagttgatagagacaatacataatata 11771745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 12748932 - 12748973
Alignment:
Q  87 ataatatatgcaagatccggggttcaaaccccgaccatcacc 128  Q
    |||||||||||||| |||||||||||||||||| ||| ||||    
T  12748932 ataatatatgcaaggtccggggttcaaaccccggccaccacc 12748973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 17917827 - 17917872
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataa 90  Q
    ||||||||||||||| || | |||| ||||||||||||||||||||    
T  17917827 gtcctcgtgagtttagcttaattgacagagacaatgcataatataa 17917872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 19701408 - 19701367
Alignment:
Q  48 ctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||||||||||||||||  || |||||||||||||    
T  19701408 ctcgtgagtttaactcagttgataaggataatgcataatata 19701367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 31511968 - 31512009
Alignment:
Q  48 ctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||    
T  31511968 ctcgtgagtctaactcagttggtagggacaatgcataatata 31512009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 32051562 - 32051521
Alignment:
Q  87 ataatatatgcaagatccggggttcaaaccccgaccatcacc 128  Q
    |||||||||||||| |||||||||||||||||| ||| ||||    
T  32051562 ataatatatgcaaggtccggggttcaaaccccggccaccacc 32051521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 32286394 - 32286353
Alignment:
Q  87 ataatatatgcaagatccggggttcaaaccccgaccatcacc 128  Q
    |||||||||||||||| |||||||||||||||| ||| ||||    
T  32286394 ataatatatgcaagattcggggttcaaaccccggccaccacc 32286353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 119
Target Start/End: Original strand, 34997452 - 34997522
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccg 119  Q
    ||||||||||| ||| ||||||||||| ||||||||||||    |||||||||||| ||  |||||| |||||||    
T  34997452 gtcctcgtgagcttagctcagttgatatagacaatgcata----aatatatgcaaggtcatgggttcgaaccccg 34997522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 42700502 - 42700543
Alignment:
Q  48 ctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||| ||||||| |||| ||||||||||||||||||||    
T  42700502 ctcgtgagcttaactcggttggtagagacaatgcataatata 42700543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 43910902 - 43910943
Alignment:
Q  49 tcgtgagtttaactcagttgatagagacaatgcataatataa 90  Q
    ||||||| |||||||||||| ||| |||||||||||||||||    
T  43910902 tcgtgagcttaactcagttggtagcgacaatgcataatataa 43910943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 44293568 - 44293613
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||| ||| |||||||| || |||||||||||||||||    
T  44293568 agtcctcgtgagcttagctcagttggtatagacaatgcataatata 44293613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000008; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 89
Target Start/End: Complemental strand, 6460140 - 6460101
Alignment:
Q  50 cgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  6460140 cgtgagtttaactcagttaatagagacaatgcataatata 6460101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 89
Target Start/End: Complemental strand, 49233853 - 49233818
Alignment:
Q  54 agtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||||||||||||||||||||||||||||    
T  49233853 agtttaactcagttgatagagacaatgcataatata 49233818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 12671815 - 12671742
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgacca 123  Q
    ||||||||||||||| |||||||| || |||||||||     |||| |||||||||||||||||||| |||| ||||||    
T  12671815 gtcctcgtgagtttagctcagttggtatagacaatgc-----ataaaatatgcaagatccggggttcgaacctcgacca 12671742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 36662437 - 36662359
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgaccatcac 127  Q
    ||||||||||||||||||||||||| || |||||||||||||   ||||||  |||| || ||||||| ||||||| |||||||    
T  36662437 agtcctcgtgagtttaactcagttggtatagacaatgcataa---aatata--caaggtcaggggttcgaaccccggccatcac 36662359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 87
Target Start/End: Complemental strand, 55962645 - 55962603
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataata 87  Q
    |||||||| |||||||||||||||||| |||||||||||||||    
T  55962645 gtcctcgtaagtttaactcagttgatatagacaatgcataata 55962603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 21935006 - 21935047
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataat 86  Q
    |||||||||||||||||||||||| || ||||||||||||||    
T  21935006 gtcctcgtgagtttaactcagttggtatagacaatgcataat 21935047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 89
Target Start/End: Original strand, 24540848 - 24540881
Alignment:
Q  56 tttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||||||||||||||||||||||||||    
T  24540848 tttaactcagttgatagagacaatgcataatata 24540881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 8027427 - 8027391
Alignment:
Q  87 ataatatatgcaagatccggggttcaaaccccgacca 123  Q
    ||||||||||||||||| |||||||||||||||||||    
T  8027427 ataatatatgcaagatcgggggttcaaaccccgacca 8027391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 11949793 - 11949757
Alignment:
Q  87 ataatatatgcaagatccggggttcaaaccccgacca 123  Q
    |||||||||||||| ||||||||||||||||||||||    
T  11949793 ataatatatgcaaggtccggggttcaaaccccgacca 11949757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 12712085 - 12712041
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||  |||||||| ||||||||||||||||||||||||    
T  12712085 gtcctcgtgaacttaactcatttgatagagacaatgcataatata 12712041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 113
Target Start/End: Complemental strand, 16733586 - 16733523
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaa 113  Q
    ||||||||||| ||||||||||||||| ||| ||||     |||||||||||||||||||| |||||||    
T  16733586 gtcctcgtgagcttaactcagttgataaagataatg-----tataatatatgcaagatccgaggttcaa 16733523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 18458749 - 18458798
Alignment:
Q  48 ctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaa 99  Q
    ||||||||||||||||||||| |||| ||||||||||  |||||||||||||    
T  18458749 ctcgtgagtttaactcagttggtagaaacaatgcata--ataatatatgcaa 18458798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 19479507 - 19479471
Alignment:
Q  87 ataatatatgcaagatccggggttcaaaccccgacca 123  Q
    |||||||||||||| ||||||||||||||||||||||    
T  19479507 ataatatatgcaaggtccggggttcaaaccccgacca 19479471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 20096337 - 20096293
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||||||||||||||| ||| || |||||||||||||    
T  20096337 gtcctcgtgagtttaactcagttggtagggataatgcataatata 20096293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 20799461 - 20799394
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccc 117  Q
    ||||||||||| ||| |||||||| ||| ||||||||||||     |||||||||| ||||||||||||||||    
T  20799461 gtcctcgtgagcttagctcagttggtagggacaatgcataa-----tatatgcaaggtccggggttcaaaccc 20799394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 89
Target Start/End: Complemental strand, 24063263 - 24063231
Alignment:
Q  57 ttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||||||||||||||||||||||||    
T  24063263 ttaactcagttgatagagacaatgcataatata 24063231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 119
Target Start/End: Complemental strand, 29346374 - 29346305
Alignment:
Q  46 tcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccg 119  Q
    ||||| |||| ||| ||||||||||||||||||||||||    ||||||||||| ||||| ||||| |||||||    
T  29346374 tcctcatgagcttagctcagttgatagagacaatgcata----aatatatgcaacatccgaggttcgaaccccg 29346305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 43155110 - 43155150
Alignment:
Q  87 ataatatatgcaagatccggggttcaaaccccgaccatcac 127  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  43155110 ataatatatgcaagatctgaggttcaaaccccgaccatcac 43155150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 43722759 - 43722826
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccc 117  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||     || ||| ||||||||||||||||    
T  43722759 gtcctcgtgagtttaactcagttggtatggacaatgcataatata-----tgtaaggtccggggttcaaaccc 43722826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 44815972 - 44816012
Alignment:
Q  87 ataatatatgcaagatccggggttcaaaccccgaccatcac 127  Q
    |||||||||||||| |||||||||||||||||| |||||||    
T  44815972 ataatatatgcaaggtccggggttcaaaccccgcccatcac 44816012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 89
Target Start/End: Complemental strand, 44918276 - 44918236
Alignment:
Q  49 tcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  44918276 tcgtgagtttaactcagttgatagagacaatatataatata 44918236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 9946421 - 9946499
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgaccatcacc 128  Q
    ||||||||||| ||| |||||||| ||  |||||||||||| |||     |||||| |||||||||||||||||||||| ||||    
T  9946421 gtcctcgtgagcttagctcagttggtatggacaatgcataaaata-----tgcaaggtccggggttcaaaccccgaccaccacc 9946499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 14136086 - 14136129
Alignment:
Q  46 tcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||| ||| ||||||||||| |||||||||||||||||    
T  14136086 tcctcgtgagcttagctcagttgataaagacaatgcataatata 14136129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 14577575 - 14577497
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgaccatcac 127  Q
    |||||||||||||||| |||||||| ||  ||||||||||||||||     |||||  ||||| |||||||||||| |||||||    
T  14577575 agtcctcgtgagtttagctcagttggtaaggacaatgcataatata-----tgcaaagtccggagttcaaaccccggccatcac 14577497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 115
Target Start/End: Complemental strand, 17423237 - 17423179
Alignment:
Q  52 tgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaac 115  Q
    |||| |||||||||||| ||||||||||||||||     |||||||||| ||||||||||||||    
T  17423237 tgaggttaactcagttggtagagacaatgcataa-----tatatgcaaggtccggggttcaaac 17423179  T

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Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 23626376 - 23626419
Alignment:
Q  46 tcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||||||||||||||| || |||||||| ||||||||    
T  23626376 tcctcgtgagtttaactcagttggtatagacaatgtataatata 23626419  T

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Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 45970773 - 45970730
Alignment:
Q  46 tcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||||| |||||||||||| |||| |||||||||||||||    
T  45970773 tcctcgtgagcttaactcagttggtagaaacaatgcataatata 45970730  T

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Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 89
Target Start/End: Complemental strand, 50376717 - 50376678
Alignment:
Q  50 cgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  50376717 cgtgagtttaactcagttggtagagacattgcataatata 50376678  T

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Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 89
Target Start/End: Original strand, 2932115 - 2932161
Alignment:
Q  43 cagtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||||||| ||| ||| |||||||| ||||||||||||||||    
T  2932115 cagtcctcgtgagcttagctctgttgatagggacaatgcataatata 2932161  T

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Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 89
Target Start/End: Original strand, 18635522 - 18635568
Alignment:
Q  43 cagtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||| |||||| |||||||||||||||  ||||||||||||||||    
T  18635522 cagtccccgtgagcttaactcagttgataaggacaatgcataatata 18635568  T

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Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 21318320 - 21318247
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgacca 123  Q
    ||||||| ||| |||||||||||| ||| ||||||||||||||||     |||||| ||  ||||||||||||||||||    
T  21318320 gtcctcgcgagcttaactcagttggtagggacaatgcataatata-----tgcaaggtctagggttcaaaccccgacca 21318247  T

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Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 22630427 - 22630354
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgacca 123  Q
    ||||||||||| ||| |||||||| ||| ||||||||||||     |||||||||| || | |||||||||||||||||    
T  22630427 gtcctcgtgagattatctcagttggtagtgacaatgcataa-----tatatgcaaggtctgaggttcaaaccccgacca 22630354  T

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Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 119
Target Start/End: Original strand, 32139336 - 32139403
Alignment:
Q  48 ctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccg 119  Q
    |||||||| ||| |||||||||||| |||||| |||||    ||||||||||| |||||||||| |||||||    
T  32139336 ctcgtgagcttagctcagttgatagggacaatacataa----atatatgcaaggtccggggttcgaaccccg 32139403  T

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Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 40847128 - 40847090
Alignment:
Q  51 gtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  40847128 gtgagcttaactcagttgatagagacaatacataatata 40847090  T

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Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 6459988 - 6459947
Alignment:
Q  48 ctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||| |||||||||||||||  ||||||||||||||||    
T  6459988 ctcgtgagcttaactcagttgatatggacaatgcataatata 6459947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 6610293 - 6610330
Alignment:
Q  86 tataatatatgcaagatccggggttcaaaccccgacca 123  Q
    ||||||||||||||| || |||||||||||||||||||    
T  6610293 tataatatatgcaaggtctggggttcaaaccccgacca 6610330  T

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Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 13984714 - 13984665
Alignment:
Q  40 caacagtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    ||||||||| |||||| |||||||||||| |||  |||||||||||||||    
T  13984714 caacagtccccgtgagcttaactcagttggtaggaacaatgcataatata 13984665  T

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Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 17134122 - 17134163
Alignment:
Q  48 ctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||| |||||||| ||| ||||||||||||||||||||    
T  17134122 ctcgtgagcttaactcaattggtagagacaatgcataatata 17134163  T

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Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 123
Target Start/End: Complemental strand, 21114332 - 21114299
Alignment:
Q  90 atatatgcaagatccggggttcaaaccccgacca 123  Q
    ||||||||||| ||||||||||||||||||||||    
T  21114332 atatatgcaaggtccggggttcaaaccccgacca 21114299  T

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Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 123
Target Start/End: Complemental strand, 23686330 - 23686293
Alignment:
Q  86 tataatatatgcaagatccggggttcaaaccccgacca 123  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  23686330 tataatatatgcaagattcggggttcaaaccccaacca 23686293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 75
Target Start/End: Complemental strand, 34019519 - 34019490
Alignment:
Q  46 tcctcgtgagtttaactcagttgatagaga 75  Q
    ||||||||||||||||||||||||||||||    
T  34019519 tcctcgtgagtttaactcagttgatagaga 34019490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 42425579 - 42425624
Alignment:
Q  43 cagtcctcgtgagtttaactcagttgatagagacaatgcataatat 88  Q
    |||||||| ||||||||||| |||||||| ||||| ||||||||||    
T  42425579 cagtcctcatgagtttaacttagttgataaagacagtgcataatat 42425624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 50953000 - 50952955
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||| |||||||||||||||| |||||| ||| |||||||||||||    
T  50953000 agtcatcgtgagtttaactcaattgatatagataatgcataatata 50952955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 51002276 - 51002321
Alignment:
Q  40 caacagtcctcgtgagtttaactcagttgatagagacaatgcataa 85  Q
    |||| ||||||||||| |||||||||||| || |||||||||||||    
T  51002276 caactgtcctcgtgagcttaactcagttggtatagacaatgcataa 51002321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 54500566 - 54500607
Alignment:
Q  48 ctcgtgagtttaactcagttgatagagacaatgcataatata 89  Q
    |||||||| ||| |||||||| ||||||||||||||||||||    
T  54500566 ctcgtgagcttagctcagttggtagagacaatgcataatata 54500607  T

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Target: scaffold0136 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 115
Target Start/End: Original strand, 37376 - 37431
Alignment:
Q  58 taactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaac 115  Q
    ||||||||||| |||||||||||||||  |||||||||||||| |||| |||||||||    
T  37376 taactcagttgttagagacaatgcata--ataatatatgcaaggtccgaggttcaaac 37431  T

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Target: scaffold0016 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 99031 - 99102
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgac 121  Q
    ||||||||||| || ||||||||||||| ||||||||||||     |||||||||| || ||||||||||| |||||    
T  99031 gtcctcgtgagcttgactcagttgatagggacaatgcataa-----tatatgcaaggtctggggttcaaactccgac 99102  T

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Target: scaffold0008 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 119563 - 119606
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatat 88  Q
    ||||||||||| |||||||||||||||| ||||||| |||||||    
T  119563 gtcctcgtgagcttaactcagttgatagggacaatgtataatat 119606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 239800 - 239878
Alignment:
Q  44 agtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgaccatcac 127  Q
    |||||||||||||||| |||||||| ||  ||||||||||||     |||||||||  ||||| |||||||||||| |||||||    
T  239800 agtcctcgtgagtttagctcagttggtaaggacaatgcataa-----tatatgcaaagtccggagttcaaaccccggccatcac 239878  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 119
Target Start/End: Original strand, 185257 - 185326
Alignment:
Q  45 gtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccg 119  Q
    ||||||||||| ||| |||||||| ||  |||||||||||| |||     |||||||||||||||||||||||||    
T  185257 gtcctcgtgagcttagctcagttggtatggacaatgcataaaata-----tgcaagatccggggttcaaaccccg 185326  T

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Target: scaffold0417 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 124
Target Start/End: Complemental strand, 8203 - 8166
Alignment:
Q  87 ataatatatgcaagatccggggttcaaaccccgaccat 124  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  8203 ataatatatacaagatccggcgttcaaaccccgaccat 8166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 16001 - 15929
Alignment:
Q  41 aacagtcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaacccc 118  Q
    ||||||||||||||| |||||||| ||| ||  |||||||     ||||||||||||||| || ||||||||||||||    
T  16001 aacagtcctcgtgagcttaactcaattggtaaggacaatg-----tataatatatgcaaggtctggggttcaaacccc 15929  T

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Target: scaffold0050 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 53446 - 53374
Alignment:
Q  46 tcctcgtgagtttaactcagttgatagagacaatgcataatataatatatgcaagatccggggttcaaaccccgacca 123  Q
    |||||||||| ||||||||||||  || |||||||||||| |||     |||||| || |||||||||||||||||||    
T  53446 tcctcgtgagcttaactcagttggaagggacaatgcataaaata-----tgcaaggtctggggttcaaaccccgacca 53374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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