View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18431_high_13 (Length: 266)
Name: NF18431_high_13
Description: NF18431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18431_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 41183335 - 41183581
Alignment:
| Q |
1 |
gcaaaatttaatgagggtgactgaaccttactttcactgaccttaaaaagaatacgtacaagtacttaccctacattattatgatatatggaaatttgta |
100 |
Q |
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| T |
41183335 |
gcaaaatttaatgagggtgactgaaccttactttcactgaccttaaaaagaatacgtacaagtacttaccctacattattatgatatatggaaatttgta |
41183434 |
T |
|
| Q |
101 |
aaccccaaacaggaatgtcttaaaatgcaaatggaaaaaggtgacttctgatacccacnnnnnnngggtttttaaccacttgttgccaacgccaagcact |
200 |
Q |
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| T |
41183435 |
aaccccaaacaggaatgtcttaaaatgcaaatggaaaaaggtgacttctgatacccactttttttgggttttt-accacttgttgccaacgccaagcact |
41183533 |
T |
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| Q |
201 |
gcacgcgtaatggcctgcaacaaacacccaacaacttattcagtacac |
248 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41183534 |
gcacgcgtaatggcctgcaacaaacacccaacaacttattcagtacac |
41183581 |
T |
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