View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18431_high_5 (Length: 519)

Name: NF18431_high_5
Description: NF18431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18431_high_5
NF18431_high_5
[»] chr6 (54 HSPs)
chr6 (7-181)||(12660124-12660295)
chr6 (12-181)||(26822089-26822259)
chr6 (7-181)||(19612415-19612590)
chr6 (12-181)||(25923068-25923238)
chr6 (7-181)||(28733817-28733991)
chr6 (7-181)||(23510076-23510251)
chr6 (7-181)||(23523624-23523799)
chr6 (7-181)||(25030895-25031070)
chr6 (7-181)||(19993831-19994005)
chr6 (7-181)||(18627664-18627839)
chr6 (13-118)||(28721008-28721114)
chr6 (7-161)||(3923891-3924046)
chr6 (7-181)||(25507824-25507997)
chr6 (7-181)||(26138896-26139070)
chr6 (27-177)||(17793676-17793826)
chr6 (7-108)||(18973963-18974064)
chr6 (7-161)||(20435497-20435650)
chr6 (7-181)||(29254218-29254391)
chr6 (7-111)||(20221490-20221594)
chr6 (12-161)||(20439205-20439353)
chr6 (7-111)||(22115474-22115578)
chr6 (7-67)||(24392573-24392633)
chr6 (12-179)||(24545307-24545473)
chr6 (12-178)||(25338919-25339086)
chr6 (7-65)||(4741333-4741391)
chr6 (7-69)||(14893777-14893839)
chr6 (7-181)||(26018193-26018366)
chr6 (94-181)||(18993405-18993492)
chr6 (7-160)||(16470229-16470382)
chr6 (7-181)||(26157566-26157739)
chr6 (7-64)||(15172574-15172631)
chr6 (85-181)||(20218231-20218327)
chr6 (85-181)||(22112256-22112352)
chr6 (116-179)||(12657826-12657889)
chr6 (7-65)||(5949372-5949430)
chr6 (7-65)||(8603849-8603907)
chr6 (7-124)||(25949612-25949728)
chr6 (7-82)||(14991956-14992032)
chr6 (7-82)||(29682938-29683013)
chr6 (17-64)||(19695761-19695808)
chr6 (12-67)||(20464721-20464776)
chr6 (7-61)||(20225435-20225489)
chr6 (7-61)||(22119419-22119473)
chr6 (7-65)||(25775387-25775445)
chr6 (19-160)||(25968817-25968957)
chr6 (7-67)||(5399574-5399634)
chr6 (7-67)||(15470844-15470903)
chr6 (7-63)||(20105308-20105364)
chr6 (7-62)||(26474302-26474357)
chr6 (7-65)||(1626500-1626558)
chr6 (13-67)||(18993508-18993562)
chr6 (7-65)||(19614875-19614933)
chr6 (38-67)||(15162559-15162588)
chr6 (27-67)||(17743833-17743873)
[»] chr8 (15 HSPs)
chr8 (7-181)||(26854304-26854479)
chr8 (13-181)||(19791914-19792083)
chr8 (31-181)||(14161839-14161989)
chr8 (7-181)||(21319658-21319832)
chr8 (7-181)||(23193620-23193793)
chr8 (7-111)||(24221233-24221337)
chr8 (7-111)||(22904900-22905004)
chr8 (7-126)||(24967543-24967663)
chr8 (7-118)||(29003930-29004041)
chr8 (7-181)||(21139902-21140075)
chr8 (7-62)||(1990170-1990225)
chr8 (7-67)||(18008470-18008530)
chr8 (7-65)||(6280098-6280156)
chr8 (21-67)||(26013280-26013326)
chr8 (13-49)||(22725490-22725526)
[»] chr1 (21 HSPs)
chr1 (7-181)||(12059458-12059633)
chr1 (7-181)||(16148127-16148302)
chr1 (22-177)||(16384650-16384805)
chr1 (31-181)||(13799142-13799292)
chr1 (7-161)||(20412506-20412659)
chr1 (7-69)||(21240408-21240470)
chr1 (7-118)||(16354382-16354493)
chr1 (7-118)||(22411406-22411517)
chr1 (7-67)||(20860375-20860435)
chr1 (7-161)||(28763555-28763708)
chr1 (7-59)||(26194585-26194637)
chr1 (19-63)||(20898345-20898389)
chr1 (7-67)||(23299236-23299296)
chr1 (7-67)||(30818865-30818925)
chr1 (7-67)||(16880092-16880152)
chr1 (7-67)||(20448755-20448815)
chr1 (7-67)||(20534521-20534581)
chr1 (12-67)||(20497904-20497959)
chr1 (7-65)||(22635400-22635458)
chr1 (7-64)||(41802622-41802679)
chr1 (32-111)||(2130250-2130328)
[»] chr2 (19 HSPs)
chr2 (7-181)||(19012691-19012866)
chr2 (27-181)||(19124028-19124183)
chr2 (7-146)||(16440041-16440181)
chr2 (7-181)||(23698489-23698662)
chr2 (7-181)||(25858269-25858442)
chr2 (7-181)||(41653293-41653466)
chr2 (7-111)||(20852429-20852533)
chr2 (12-67)||(23256705-23256760)
chr2 (13-111)||(24371128-24371225)
chr2 (7-161)||(22328746-22328899)
chr2 (7-111)||(24322099-24322203)
chr2 (7-118)||(30948937-30949047)
chr2 (7-160)||(23613824-23613977)
chr2 (85-179)||(24366062-24366156)
chr2 (7-160)||(23340820-23340972)
chr2 (7-65)||(29563541-29563599)
chr2 (7-50)||(24366000-24366043)
chr2 (12-57)||(13004786-13004831)
chr2 (7-67)||(24609751-24609811)
[»] scaffold0001 (5 HSPs)
scaffold0001 (7-181)||(520984-521159)
scaffold0001 (7-111)||(33180-33284)
scaffold0001 (7-111)||(38487-38591)
scaffold0001 (7-67)||(82288-82348)
scaffold0001 (7-67)||(159416-159476)
[»] chr7 (35 HSPs)
chr7 (7-181)||(4256294-4256469)
chr7 (7-170)||(4982829-4982992)
chr7 (7-177)||(4541405-4541575)
chr7 (7-181)||(21005205-21005378)
chr7 (7-118)||(11997018-11997129)
chr7 (13-111)||(679182-679279)
chr7 (7-62)||(8836919-8836974)
chr7 (12-67)||(12348319-12348374)
chr7 (12-62)||(19515049-19515099)
chr7 (7-160)||(39271412-39271564)
chr7 (12-111)||(4465471-4465570)
chr7 (7-118)||(39389032-39389143)
chr7 (7-62)||(6257205-6257260)
chr7 (7-62)||(9193697-9193752)
chr7 (7-62)||(9562287-9562342)
chr7 (7-111)||(38877708-38877811)
chr7 (7-62)||(8780128-8780183)
chr7 (7-62)||(8786967-8787022)
chr7 (7-62)||(33610072-33610127)
chr7 (12-111)||(15523331-15523429)
chr7 (7-63)||(30063643-30063699)
chr7 (7-62)||(4091053-4091108)
chr7 (12-67)||(48713795-48713850)
chr7 (7-160)||(3376196-3376348)
chr7 (7-65)||(8521841-8521899)
chr7 (7-65)||(16487719-16487777)
chr7 (12-108)||(17911891-17911987)
chr7 (7-67)||(1614262-1614322)
chr7 (7-67)||(4460476-4460536)
chr7 (93-181)||(6257290-6257378)
chr7 (97-181)||(8836802-8836885)
chr7 (7-65)||(23292431-23292489)
chr7 (7-52)||(2307220-2307265)
chr7 (32-111)||(1864605-1864683)
chr7 (7-63)||(46274447-46274503)
[»] chr5 (21 HSPs)
chr5 (7-181)||(12410759-12410934)
chr5 (12-181)||(22171019-22171189)
chr5 (7-161)||(16677331-16677486)
chr5 (7-123)||(2953062-2953179)
chr5 (7-181)||(20738588-20738750)
chr5 (7-111)||(24166565-24166669)
chr5 (12-89)||(31414806-31414884)
chr5 (7-111)||(24165557-24165661)
chr5 (7-111)||(23029250-23029353)
chr5 (12-65)||(31757822-31757875)
chr5 (7-62)||(34222813-34222868)
chr5 (7-127)||(20169155-20169274)
chr5 (7-65)||(19890091-19890149)
chr5 (7-65)||(21833276-21833334)
chr5 (12-65)||(21382627-21382680)
chr5 (12-65)||(23435673-23435726)
chr5 (12-65)||(23447040-23447093)
chr5 (7-58)||(23114613-23114664)
chr5 (7-65)||(21390019-21390077)
chr5 (23-65)||(25577350-25577392)
chr5 (97-181)||(31757886-31757970)
[»] chr3 (33 HSPs)
chr3 (15-181)||(13070007-13070173)
chr3 (7-177)||(8685526-8685695)
chr3 (12-161)||(7908777-7908927)
chr3 (7-181)||(13418622-13418798)
chr3 (7-181)||(42244229-42244403)
chr3 (7-181)||(22039079-22039249)
chr3 (7-181)||(20224911-20225085)
chr3 (13-109)||(17775090-17775186)
chr3 (13-109)||(19076391-19076487)
chr3 (7-181)||(17050968-17051141)
chr3 (7-181)||(17209819-17209992)
chr3 (7-118)||(10850399-10850510)
chr3 (7-67)||(11577431-11577491)
chr3 (7-62)||(9774762-9774817)
chr3 (7-107)||(17023547-17023647)
chr3 (85-181)||(17041955-17042051)
chr3 (7-62)||(9762307-9762362)
chr3 (7-157)||(14347762-14347911)
chr3 (7-65)||(19566677-19566735)
chr3 (7-116)||(27992170-27992278)
chr3 (7-126)||(6237148-6237268)
chr3 (7-67)||(1993799-1993859)
chr3 (7-67)||(1998958-1999018)
chr3 (17-124)||(13605331-13605437)
chr3 (7-65)||(11399230-11399288)
chr3 (7-65)||(14137434-14137492)
chr3 (7-65)||(25055368-25055426)
chr3 (7-65)||(36079414-36079472)
chr3 (133-181)||(17023487-17023535)
chr3 (7-62)||(3280188-3280243)
chr3 (7-57)||(17576935-17576985)
chr3 (7-67)||(8532239-8532299)
chr3 (7-67)||(40846824-40846884)
[»] chr4 (21 HSPs)
chr4 (7-181)||(38652390-38652565)
chr4 (7-125)||(8561999-8562118)
chr4 (7-161)||(9192490-9192645)
chr4 (7-181)||(3771872-3772045)
chr4 (7-175)||(5675706-5675877)
chr4 (7-126)||(12807862-12807982)
chr4 (7-111)||(25190488-25190592)
chr4 (27-110)||(33330711-33330794)
chr4 (12-111)||(17169090-17169188)
chr4 (12-111)||(17174650-17174748)
chr4 (7-124)||(31594177-31594293)
chr4 (7-67)||(12345638-12345698)
chr4 (7-126)||(39418-39536)
chr4 (7-65)||(43701255-43701313)
chr4 (7-124)||(20058848-20058964)
chr4 (7-67)||(10731483-10731543)
chr4 (7-67)||(10945252-10945312)
chr4 (7-61)||(39043171-39043225)
chr4 (27-67)||(11048655-11048695)
chr4 (7-67)||(11922125-11922185)
chr4 (32-111)||(55268076-55268154)
[»] scaffold0011 (1 HSPs)
scaffold0011 (7-181)||(172974-173149)
[»] scaffold0098 (2 HSPs)
scaffold0098 (7-127)||(4488-4609)
scaffold0098 (7-65)||(43991-44049)
[»] scaffold0264 (1 HSPs)
scaffold0264 (7-181)||(22104-22277)
[»] scaffold0713 (1 HSPs)
scaffold0713 (7-181)||(6386-6559)
[»] scaffold0855 (1 HSPs)
scaffold0855 (7-111)||(3772-3875)
[»] scaffold0847 (1 HSPs)
scaffold0847 (7-111)||(3937-4040)
[»] scaffold0074 (2 HSPs)
scaffold0074 (7-111)||(22418-22522)
scaffold0074 (13-181)||(53923-54095)
[»] scaffold0123 (1 HSPs)
scaffold0123 (7-170)||(14337-14500)
[»] scaffold0014 (1 HSPs)
scaffold0014 (14-62)||(168544-168592)
[»] scaffold0362 (1 HSPs)
scaffold0362 (7-126)||(8902-9020)
[»] scaffold0197 (1 HSPs)
scaffold0197 (7-160)||(8508-8660)
[»] scaffold0278 (1 HSPs)
scaffold0278 (7-65)||(12223-12281)
[»] scaffold0049 (1 HSPs)
scaffold0049 (7-65)||(14295-14353)
[»] scaffold0773 (2 HSPs)
scaffold0773 (96-160)||(1372-1436)
scaffold0773 (12-67)||(1464-1519)
[»] scaffold0447 (2 HSPs)
scaffold0447 (7-65)||(6761-6819)
scaffold0447 (7-65)||(11375-11433)
[»] scaffold0383 (1 HSPs)
scaffold0383 (7-65)||(9370-9428)
[»] scaffold0213 (1 HSPs)
scaffold0213 (7-67)||(21944-22004)


Alignment Details
Target: chr6 (Bit Score: 117; Significance: 2e-59; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 7 - 181
Target Start/End: Original strand, 12660124 - 12660295
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||| ||||||||||||||    
T  12660124 tagactattctcatgtttca---tccttgtttaatttcacttgttccaatatcaaaacttctttttcgatgcttctctttgatatttgtgatgatgaatt 12660220  T
Q  107 aacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||  ||||||| ||||||||||    
T  12660221 aacaagtactaaccctccgctgtcgcattatgagtttgatacttgttaattcattataaaaacggtgaaattaga 12660295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 12 - 181
Target Start/End: Complemental strand, 26822259 - 26822089
Alignment:
Q  12 tattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaattaaca 110  Q
    |||||||||||||  |||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||| ||| |||| ||||||||| ||||||||    
T  26822259 tattctcatgttttgcaatccttgtctaatttcacttgttccaatatcaaaacttcttctttcgatgcttcgctttaatatttgtgatgataaattaaca 26822160  T
Q  111 agtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||| | ||||||||||    
T  26822159 agtactaaccctccgctatcgcattataagtttgatacttgttaattcattataaaaatggtgaaattaga 26822089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 7 - 181
Target Start/End: Original strand, 19612415 - 19612590
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||  |||||||| |||||||||||||    
T  19612415 tagactattctcatgtttcacaatccttgtctaatttcacttgttccaatatcaaaacttcttctttcgatgcttcactttgatatttgtgatgatgaat 19612514  T
Q  106 taacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||||||||||||||||| || |||  |||| |||||||||||||||||||| ||  ||||||| ||||||||||    
T  19612515 taacaagtactaaccctccactgtcgctttatgagtttgatacttgttaattctttataaaaacggtgaaattaga 19612590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 12 - 181
Target Start/End: Original strand, 25923068 - 25923238
Alignment:
Q  12 tattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaattaaca 110  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||| ||||||| ||||| |||||||| ||||||||||||||||||    
T  25923068 tattctcatgtttcgcaatccttgtctaatttcacttgttccaatataaaaacttcttctttcgatgcttcgctttgatatttgtgatgatgaattaaca 25923167  T
Q  111 agtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    | |||||||||||||||||||  |||| |||||| || ||||| |||||||  ||||||| ||||||||||    
T  25923168 aatactaaccctccgctatcgctttatgagtttggtatttgtttattcattataaaaacggtgaaattaga 25923238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 7 - 181
Target Start/End: Original strand, 28733817 - 28733991
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||||||||||| ||||||||| | ||||||||||||||||||||||||| ||||| |||||||  |||| |||||||| ||||||||||||     
T  28733817 tagactattctcatgtttcgcaatccttgct-aatttcacttgttccaatatcaaaatttcttctttcgatgtttcgctttgatatttgtgatgatgaac 28733915  T
Q  106 taacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||||||||||||||||| || ||| ||||| |||||||||||||||||||||||  ||||||| ||||||||||    
T  28733916 taacaagtactaaccctcctctgtcgcattatgagtttgatacttgttaattcattataaaaacggtgaaattaga 28733991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 7 - 181
Target Start/End: Original strand, 23510076 - 23510251
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||||||||||  |||||||||| || ||||||||||| ||||||||||||||||| ||||||| ||||  |||||||| |||||||||||||    
T  23510076 tagactattctcatgttttgcaatccttgtctactttcacttgttacaatatcaaaacttcttctttcgatgcttcactttgatatttgtgatgatgaat 23510175  T
Q  106 taacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    |||||||||||||||||||| | |||  |||| |||||||||||||||||||||||  ||||||| ||| ||||||    
T  23510176 taacaagtactaaccctccgatgtcgctttatgagtttgatacttgttaattcattataaaaacggtgacattaga 23510251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 7 - 181
Target Start/End: Original strand, 23523624 - 23523799
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||| ||||||| |||||||||| ||||||||||||||| |||||||||||||||| ||||||| ||||| |||||||| |||||||||||||    
T  23523624 tagactattcttatgtttcgcaatccttgtctaatttcacttgttcaaatatcaaaacttcttctttcgatgcttcgctttgatatttgtgatgatgaat 23523723  T
Q  106 taacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||||||||  |||||||| | ||   ||||||||||||||||||||||||||||  ||||||  ||||||||||    
T  23523724 taacaagtaccgaccctccgatgtcactttataagtttgatacttgttaattcattacaaaaacagtgaaattaga 23523799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 7 - 181
Target Start/End: Original strand, 25030895 - 25031070
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttcttt-ttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||  |||||| ||||| |||||||| | |||||||||||    
T  25030895 tagactattctcatgttttgcaatccttgtctaatttcacttgttccaatatcaaaacttcttccttcgatgcttcgctttgatatttatgatgatgaat 25030994  T
Q  106 taacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    |||||| ||||||||||||| | ||| ||||| ||||||||| |||||||||||||  ||||||  ||||||||||    
T  25030995 taacaaatactaaccctccgttgtcgcattatgagtttgatatttgttaattcattataaaaacagtgaaattaga 25031070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 19994005 - 19993831
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||| || | ||||||| ||||| |||||||| ||| ||||||||||    
T  19994005 tagactattctcatgtttcacaatccttgtctaatttcacttgttccgatatcaaaaattttctttcgatgcttcgctttgatatttgtcatgatgaatt 19993906  T
Q  107 aacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||| ||||||||||||| | | |  |||| |||||| || | |||||||||||  ||||||| ||||||||||    
T  19993905 aacaaatactaaccctccgttgttgctttatgagtttggtattcgttaattcattataaaaacggtgaaattaga 19993831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 18627839 - 18627664
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| ||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| |||| || ||| |||||||||| ||||||| | |||    
T  18627839 tagactattctcatgtttcacaatccttgtctaatttcactttttccaatatcaagacttcttctttctatgctttgttttgatatttgtgatggtaaat 18627740  T
Q  106 taacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||||||||||||||| || | | |  || | |||||||||||||||||||||||  | ||||| ||||||||||    
T  18627739 taacaagtactaaccctgcgttgttgctttgtgagtttgatacttgttaattcattatataaacggtgaaattaga 18627664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 28721008 - 28721114
Alignment:
Q  13 attctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaattaacaa 111  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||||||    
T  28721008 attctcatgtttcgcaatccttgtctaatttcacttgttccaatatcaaaatttcttctttcgatgtttcgttttgatatttgtgatgatgaattaacaa 28721107  T
Q  112 gtactaa 118  Q
    |||||||    
T  28721108 gtactaa 28721114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 7 - 161
Target Start/End: Complemental strand, 3924046 - 3923891
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||||||||||| |||||||||| ||| ||||||||||||||||| ||| |||||| ||||||| ||||  |||||||| |||||| ||||||    
T  3924046 tagactattctcatgtttcgcaatccttgtctaaattcacttgttccaatattaaagcttcttctttcgatgcttcactttgatatttgtgattatgaat 3923947  T
Q  106 taacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcatt 161  Q
    ||||||||| | ||||||||||   |  |||| | |||||||||||||||||||||    
T  3923946 taacaagtattcaccctccgctgctgctttatgaatttgatacttgttaattcatt 3923891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 25507997 - 25507824
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| |||| ||||||||| |||||||||| ||||||||||||||||||||||||| ||||   |||| |   | |  ||||||| ||||||||||||||    
T  25507997 tagactattatcatgtttcgcaatccttgtctaatttcacttgttccaatatcaaagcttcgcgttcgctttat-gaattgatatttgtgatgatgaatt 25507899  T
Q  107 aacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||| ||||||||||||||  |||  |||| |||||| || |||||||||||||   |||||| ||||||||||    
T  25507898 aacaaatactaaccctccgcgttcgctttatgagtttggtatttgttaattcattatcaaaacggtgaaattaga 25507824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 26139070 - 26138896
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| ||||||||| |||| |||||||||| ||||||||||||||||||||||||| || | | |||| |  |  |  ||||||| ||||||||||||||    
T  26139070 tagactattctcatatttcgcaatccttgtctaatttcacttgttccaatatcaaagctccgtgttcgcttttatgaattgatatttgtgatgatgaatt 26138971  T
Q  107 aacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||| ||||| ||||||||  |||  |||| |||||| || |||||||||||||   |||||| ||||||||||    
T  26138970 aacaaatactatccctccgcgttcgctttatgagtttggtatttgttaattcattatcaaaacggtgaaattaga 26138896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 27 - 177
Target Start/End: Original strand, 17793676 - 17793826
Alignment:
Q  27 caatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaattaacaagtactaaccctccg 125  Q
    |||||||||| |||||||| ||||||||||||||||||||| | |||||||||||||  ||||||| |||||| |||||||||||| ||  |||||||      
T  17793676 caatccttgtctaatttcatttgttccaatatcaaaacttcatctttcgatacttcg-cttgatatttgtgattatgaattaacaactatcaaccctcgc 17793774  T
Q  126 ctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaat 177  Q
    || |||  ||||   ||| |||||||||||||||||  ||||||||||||||    
T  17793775 ctttcgatttattgatttaatacttgttaattcattataaaaacgatgaaat 17793826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 18974064 - 18973963
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||||||||||| |||||||| | ||||||| |||||  ||||||| |||||| ||||||    
T  18974064 tagattattctcatgtttcactatccctgtctaatttcacttgttccaatattaaaacttcatctttcgattcttcg-cttgatatttgtgattatgaat 18973966  T
Q  106 taa 108  Q
    |||    
T  18973965 taa 18973963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 7 - 161
Target Start/End: Complemental strand, 20435650 - 20435497
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||| |  ||||| |  |  |  ||||||| |||||||||| |||    
T  20435650 tagactattctcatgtttcgcaatccttgtctaatttcacttgttccaatatcaaaactccactttcgct-ttatgaattgatatttgtgatgatggatt 20435552  T
Q  107 aacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcatt 161  Q
    ||||| |||||||||||| |  |||  | |  ||||||||| |||||||||||||    
T  20435551 aacaaatactaaccctcctccttcgcttcaagagtttgatatttgttaattcatt 20435497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 29254391 - 29254218
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| |||||||||||||| |||||||||| ||||||||||||||||||||||||| || | | |||| |  |  |  ||||||| ||||||||| ||||    
T  29254391 tagactattctcatgtttctcaatccttgtctaatttcacttgttccaatatcaaacctccgtgttcgct-ttatgaattgatatttgtgatgataaatt 29254293  T
Q  107 aacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||| ||||||||||| ||  |||  |||| |||||| |  |||||||||||||  | ||||| ||||||||||    
T  29254292 aacaaatactaaccctctgcgttcgctttatgagtttggtgtttgttaattcattatagaaacggtgaaattaga 29254218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 20221594 - 20221490
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||||||||||| |||||||||| |||||||||||||| |||||||||||||||   ||||||| |||||  ||||||| ||||||||||||     
T  20221594 tagactattctcatgtttcgcaatccttgtctaatttcacttgtttcaatatcaaaacttcaactttcgatccttcg-cttgatatttgtgatgatgaaa 20221496  T
Q  106 taacaa 111  Q
    ||||||    
T  20221495 taacaa 20221490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 161
Target Start/End: Complemental strand, 20439353 - 20439205
Alignment:
Q  12 tattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaattaacaa 111  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |  | ||| |  |  |  ||||||| |||||||||||||||||||    
T  20439353 tattcccatgtttcacaatccttgtctaatttcacttgttccaatatcaaaactccactatcgct-ttatgaattgatatttgtgatgatgaattaacaa 20439255  T
Q  112 gtactaaccctccgctatcgtattataagtttgatacttgttaattcatt 161  Q
     |||||||||||| || | |  | || ||| ||||| |||||||||||||    
T  20439254 atactaaccctcctctttggcttcatgagtctgatatttgttaattcatt 20439205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 22115578 - 22115474
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||||||||||| |||||||||| |||||||||||||| |||||||||||||||   ||||||| |||||  ||||||| ||||||||||||     
T  22115578 tagactattctcatgtttcgcaatccttgtctaatttcacttgtttcaatatcaaaacttcaactttcgatccttcg-cttgatatttgtgatgatgaaa 22115480  T
Q  106 taacaa 111  Q
    ||||||    
T  22115479 taacaa 22115474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 24392573 - 24392633
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  24392573 tagattattctcatgtttcacaatccttgtctaatttcacttgttaaaatatcaaaacttc 24392633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 24545307 - 24545473
Alignment:
Q  12 tattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaattaacaa 111  Q
    |||||||||||||| ||| |||||| ||||||||||||||||||||||||| || |   ||||     | |  ||||||| || ||||||||||||||||    
T  24545307 tattctcatgtttcccaacccttgtctaatttcacttgttccaatatcaaagctccgcgttcgcgttat-gaattgatatttgagatgatgaattaacaa 24545405  T
Q  112 gtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaatta 179  Q
     ||||||||||||||  |||  |||| |||||| || |||||||||||||  ||||||| ||||||||    
T  24545406 atactaaccctccgcattcgctttatgagtttggtatttgttaattcattataaaaacggtgaaatta 24545473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 178
Target Start/End: Original strand, 25338919 - 25339086
Alignment:
Q  12 tattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaattaaca 110  Q
    |||||| ||||||| ||||| |||| ||||| || |||||||||||||||||||| || ||| ||| ||||  |||||||| |||||| |||||||||||    
T  25338919 tattcttatgtttcgcaatcattgtctaattccatttgttccaatatcaaaacttattcttttgatgcttcactttgatatttgtgataatgaattaaca 25339018  T
Q  111 agtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaatt 178  Q
    | || |||||||  | | |||  |||| |||||| || |||||||||||||  ||||| | |||||||    
T  25339019 aataataaccctatgttgtcgctttatgagtttggtatttgttaattcattataaaaatggtgaaatt 25339086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 4741391 - 4741333
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  4741391 tagactattctcatgtttcgcaatccttgtctaatttcacttgttccaatatcaaaact 4741333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 14893839 - 14893777
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt 69  Q
    |||| |||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||    
T  14893839 tagactattctcatgttttgcaatccttgtctaatttcacttgttccaatatcaaaacttctt 14893777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 26018366 - 26018193
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| ||||||||| |||| ||||| |||| ||||||||||||||||||||||||| || |   |||| |   | |  ||||||| ||||||||||||||    
T  26018366 tagactattctcatatttcgcaatcattgtctaatttcacttgttccaatatcaaagctccgcgttcgctttat-gaattgatatttgtgatgatgaatt 26018268  T
Q  107 aacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||| ||||| ||||||||  |||  |||| |||||| || |||||||||||||   |||||| ||||||||||    
T  26018267 aacaaatactatccctccgcgttcgctttatgagtttggtatttgttaattcattatcaaaacggtgaaattaga 26018193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 94 - 181
Target Start/End: Complemental strand, 18993492 - 18993405
Alignment:
Q  94 gtgatgatgaattaacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||||||||||||||||||||||||||  |||| ||   |||| |||||||| ||||||||||||||  ||||||| ||||||||||    
T  18993492 gtgatgatgaattaacaagtactaacccaacgctgtcactttatgagtttgatgcttgttaattcattataaaaacggtgaaattaga 18993405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 160
Target Start/End: Complemental strand, 16470382 - 16470229
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaactt-ctttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||| ||||||||| |||||||||| ||| ||||||||||| ||||||||||||| |  ||||| |   | |  ||||||| || ||||||||||    
T  16470382 tagactattttcatgtttcgcaatccttgtctaaattcacttgttcaaatatcaaaacttccactttcgcttgat-gaattgatatttgagatgatgaat 16470284  T
Q  106 taacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcat 160  Q
    |||||| |||||||||||| || |||  | || ||||||||| ||||||||||||    
T  16470283 taacaattactaaccctccactttcgcttcatgagtttgataattgttaattcat 16470229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 26157739 - 26157566
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| |||| |||| |||| ||||| |||| ||||||||||||||||||||||||| || | | |||| |   | |  ||||||| ||||||||||||||    
T  26157739 tagactattttcatttttcgcaatctttgtctaatttcacttgttccaatatcaaagctccgtgttcgctttat-gaattgatatttgtgatgatgaatt 26157641  T
Q  107 aacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    || || ||||| ||||||||  |||  |||| |||||| || |||||||||||||   |||||| ||||||||||    
T  26157640 aataaatactatccctccgcgttcgctttatgagtttggtatttgttaattcattatcaaaacggtgaaattaga 26157566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 15172631 - 15172574
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaac 64  Q
    ||||||||| ||||||||| |||||| ||| |||||||||||||||||||||||||||    
T  15172631 tagattattgtcatgtttcgcaatccctgtctaatttcacttgttccaatatcaaaac 15172574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 85 - 181
Target Start/End: Original strand, 20218231 - 20218327
Alignment:
Q  85 ttgatatctgtgatgatgaattaacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||||| ||||||||||||||||||| || |||||||| | | |||  |||| |||||| || |||||||||||||  ||||||| ||||||||||    
T  20218231 ttgatatttgtgatgatgaattaacaactagtaaccctctgttgtcgctttatgagtttggtatttgttaattcattataaaaacggtgaaattaga 20218327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 85 - 181
Target Start/End: Original strand, 22112256 - 22112352
Alignment:
Q  85 ttgatatctgtgatgatgaattaacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||||| ||||||||||||||||||| || |||||||| | | |||  |||| |||||| || |||||||||||||  ||||||| ||||||||||    
T  22112256 ttgatatttgtgatgatgaattaacaactagtaaccctctgttgtcgctttatgagtttggtatttgttaattcattataaaaacggtgaaattaga 22112352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 12657826 - 12657889
Alignment:
Q  116 taaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaatta 179  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||  ||||||| | ||||||    
T  12657826 taaccctccgctgtcgtattatgagtttgatacttgttaattcattataaaaacggttaaatta 12657889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 5949372 - 5949430
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||| ||||||||||||||||||||||||| ||| || |||||||| ||||||||||||    
T  5949372 tagactattctcatgtttcacaatccttgtctaaatttacttgttcaaatatcaaaact 5949430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 8603907 - 8603849
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||| |||| |||||||||||||||||||| ||| ||||||||||| ||||||||||||    
T  8603907 tagactattttcatgtttcacaatccttgtctaaattcacttgttcgaatatcaaaact 8603849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 25949728 - 25949612
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| |||| |||||||||||||||||||| ||| ||||||| ||| |||||||||||| |  ||||| |  |  |  ||||||| || |||||||||||    
T  25949728 tagactattttcatgtttcacaatccttgtctaaattcactttttcaaatatcaaaactccactttcg-ttttatgaattgatatttgagatgatgaatt 25949630  T
Q  107 aacaagtactaaccctcc 124  Q
    ||||| ||||||||||||    
T  25949629 aacaattactaaccctcc 25949612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 14991956 - 14992032
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcg 82  Q
    |||| |||| ||||||||| |||||||||| ||  ||||||||||||||||| |||||||| | |||||||||||||    
T  14991956 tagactattttcatgtttcgcaatccttgtctatattcacttgttccaatattaaaacttcatctttcgatacttcg 14992032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 29683013 - 29682938
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcg 82  Q
    |||| |||| ||||||||| || ||||||| |||||||||||||||||||||| ||||||| | |||||||||||||    
T  29683013 tagactattatcatgtttcgcagtccttgtctaatttcacttgttccaatatc-aaacttcatctttcgatacttcg 29682938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 19695808 - 19695761
Alignment:
Q  17 tcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaac 64  Q
    ||||||||| |||||||||| ||||||||||||| |||||||||||||    
T  19695808 tcatgtttcgcaatccttgtctaatttcacttgtaccaatatcaaaac 19695761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 20464776 - 20464721
Alignment:
Q  12 tattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||||||||||||   ||||||||| |||||| |||||||||||||||||||||||    
T  20464776 tattctcatgttttgaaatccttgtctaatttaacttgttccaatatcaaaacttc 20464721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 20225489 - 20225435
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaa 61  Q
    |||| |||||||||||||| ||||| |||| |||||||| |||||||||||||||    
T  20225489 tagactattctcatgtttcgcaatcgttgtctaatttcaattgttccaatatcaa 20225435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 22119473 - 22119419
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaa 61  Q
    |||| |||||||||||||| ||||| |||| |||||||| |||||||||||||||    
T  22119473 tagactattctcatgtttcgcaatcgttgtctaatttcaattgttccaatatcaa 22119419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 25775445 - 25775387
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||| |||| |||||||||||||||||||| ||| ||||||||||  ||||||||||||    
T  25775445 tagactattttcatgtttcacaatccttgtctaaattcacttgtttgaatatcaaaact 25775387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 25968957 - 25968817
Alignment:
Q  19 atgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaattaacaagtactaa 118  Q
    ||||||| |||||||||| ||| ||||||||||| |||||||||||| |  ||||| | | | |  || |||| || |||||||||||||||| ||||||    
T  25968957 atgtttcgcaatccttgtctaaattcacttgttcgaatatcaaaactccactttcgtttcat-gaattaatatttgagatgatgaattaacaattactaa 25968859  T
Q  119 ccctccgctatcgtattata-agtttgatacttgttaattcat 160  Q
    |||||| || |||  || || ||||||||| ||||||||||||    
T  25968858 ccctccactttcg-cttctacagtttgataattgttaattcat 25968817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 5399634 - 5399574
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||| |||| ||||||||| ||| |||||| ||| ||||||||||||||||| ||||||||    
T  5399634 tagactattttcatgtttcgcaacccttgtctaaattcacttgttccaatattaaaacttc 5399574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 15470844 - 15470903
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    ||||||||| ||||||||| |||||| ||| |||||||||||||||| ||| |||||||||    
T  15470844 tagattattgtcatgtttcgcaatccctgtctaatttcacttgttcc-ataacaaaacttc 15470903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 20105308 - 20105364
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaa 63  Q
    |||| |||||||||||||| ||| |||||| |||||||||||||| |||||| ||||    
T  20105308 tagactattctcatgtttcgcaacccttgtctaatttcacttgtttcaatattaaaa 20105364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 26474357 - 26474302
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaa 62  Q
    |||| |||||||||||||| |||| ||||| ||| ||||||||||| |||||||||    
T  26474357 tagactattctcatgtttcgcaattcttgtctaaattcacttgttcgaatatcaaa 26474302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 1626558 - 1626500
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||| |||| ||||||||| |||||||||| ||| |||||||| || ||||||||||||    
T  1626558 tagactattttcatgtttcgcaatccttgtctaaattcacttgatcgaatatcaaaact 1626500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 18993562 - 18993508
Alignment:
Q  13 attctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    ||||| ||||||| |||||||||  ||||||||| |||||||||||||||| |||    
T  18993562 attcttatgtttcgcaatccttgcctaatttcacatgttccaatatcaaaatttc 18993508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 19614875 - 19614933
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||| |||| ||||||||| |||||||||| ||| |||| |||||| ||||||||||||    
T  19614875 tagactattttcatgtttcgcaatccttgtctaaattcatttgttcgaatatcaaaact 19614933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 67
Target Start/End: Complemental strand, 15162588 - 15162559
Alignment:
Q  38 taatttcacttgttccaatatcaaaacttc 67  Q
    ||||||||||||||||||||||||||||||    
T  15162588 taatttcacttgttccaatatcaaaacttc 15162559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 17743873 - 17743833
Alignment:
Q  27 caatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||||||||| ||| ||||||||||| ||||||||||||||    
T  17743873 caatccttgtctaaattcacttgttcgaatatcaaaacttc 17743833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 9e-59; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 26854479 - 26854304
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| | |||||||| |||||||||||||    
T  26854479 tagactattctcatgtttcacaatccttgtctaatttcacttgttccaatatcaaaacttcttctttcgatgctttgctttgatatttgtgatgatgaat 26854380  T
Q  106 taacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    |||||||||||||||||||| | |||  |||| |||||||||||||||||||||||  ||||||||||||||||||    
T  26854379 taacaagtactaaccctccgttgtcgctttatgagtttgatacttgttaattcattataaaaacgatgaaattaga 26854304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 13 - 181
Target Start/End: Original strand, 19791914 - 19792083
Alignment:
Q  13 attctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttcttttt-cgatacttcgttttgatatctgtgatgatgaattaacaa 111  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||| |||||||| || ||||  |||| |||||||| |||||||||||||||||||    
T  19791914 attctcatgtttcacaatccttgtctaatttcacttgttacaatatcataacttcttattacgatgtttcgctttgatatttgtgatgatgaattaacaa 19792013  T
Q  112 gtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    |||| |||||| || | ||| ||||| |||||||||||||||||||||||  ||||| | ||||||||||    
T  19792014 gtaccaacccttcgttgtcgcattatgagtttgatacttgttaattcattataaaaatggtgaaattaga 19792083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 31 - 181
Target Start/End: Original strand, 14161839 - 14161989
Alignment:
Q  31 ccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaattaacaagtactaaccctccgctat 129  Q
    |||||| ||||||||||||||| |||||||||||||||| ||||||| ||||| |||||||| |||||||||||||||||||||| |||||||| | | |    
T  14161839 ccttgtctaatttcacttgttc-aatatcaaaacttcttctttcgatgcttcgctttgatatttgtgatgatgaattaacaagtattaaccctctgttgt 14161937  T
Q  130 cgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||  |||| |||||||||||| ||||||||||  ||||||| ||||||||||    
T  14161938 cgctttatgagtttgatacttcttaattcattataaaaacggtgaaattaga 14161989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 21319832 - 21319658
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||| ||||||||| |||||||||| ||| ||||| ||||||||||| ||| |||||| ||||| | | | | ||  |||| | |||||||||||    
T  21319832 tagactattgtcatgtttctcaatccttgtctaaattcacctgttccaatattaaatcttcttctttcggtccattgctta-atatttttgatgatgaat 21319734  T
Q  106 taacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    |||||||||||||||||||| | ||| ||||| |||||||||||| ||||||||||  ||||||| |||| |||||    
T  21319733 taacaagtactaaccctccgttgtcgcattatgagtttgatactttttaattcattataaaaacggtgaatttaga 21319658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 181
Target Start/End: Original strand, 23193620 - 23193793
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||    ||||| |  |  |  |||| || || |||||||||||    
T  23193620 tagactattctcatgtttcgcaatccttgtctaatttcacttgttccaatatcaaaactctactttcgct-ttatgaattgacatttgagatgatgaatt 23193718  T
Q  107 aacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||| |||||||||||| || |||  | || ||||||||| |||||||||||||  || |||| ||||||||||    
T  23193719 aacaaatactaaccctccactttcgcttcatgagtttgatatttgttaattcattataacaacggtgaaattaga 23193793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 7 - 111
Target Start/End: Original strand, 24221233 - 24221337
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaac-ttctttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| || | |||||||| ||||  ||||||| |||||||| |||     
T  24221233 tagactattctcatgtttcacaatccttgtctaatttcacttgttccaatatcaaaactttatctttcgatatttcg-cttgatatttgtgatgacgaaa 24221331  T
Q  106 taacaa 111  Q
    ||||||    
T  24221332 taacaa 24221337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 22905004 - 22904900
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| ||||||||||||| |||||| |||| ||||||||||||||||||||||||||| || | |||||||  ||||  ||||||| ||||||||||||     
T  22905004 tagactattctcatgtttgacaatcattgtctaatttcacttgttccaatatcaaaacatcatctttcgatcgttcg-cttgatatttgtgatgatgaaa 22904906  T
Q  106 taacaa 111  Q
    ||||||    
T  22904905 taacaa 22904900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 24967663 - 24967543
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||||||||||  ||| |||||| ||||||||||||||||||||| |||||||| | |||||||  ||||  || |||| |||||||||||||    
T  24967663 tagactattctcatgttttgcaacccttgtctaatttcacttgttccaatattaaaacttcatctttcgatcattcg-cttaatatttgtgatgatgaat 24967565  T
Q  106 taacaagtact-aaccctccgc 126  Q
    |||||| |||| ||||||||||    
T  24967564 taacaattactaaaccctccgc 24967543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 29004041 - 29003930
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||||||||||| ||| |||| | ||||||||||||||||||||| |||||||| | ||||||| |||||   | |||| |||||||||||||    
T  29004041 tagactattctcatgtttcgcaacccttttctaatttcacttgttccaatattaaaacttcatctttcgatccttcg-cctaatatttgtgatgatgaat 29003943  T
Q  106 taacaagtactaa 118  Q
    |||||||| ||||    
T  29003942 taacaagtgctaa 29003930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 21140075 - 21139902
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgtt--ttgatatctgtgatgatgaa 104  Q
    |||| |||||||||||||| ||| |||||| ||||||||||||||||||||||||| |  |   ||||   |||  |   ||||||| |  |||||||||    
T  21140075 tagactattctcatgtttcgcaacccttgtctaatttcacttgttccaatatcaaagccccgcgttcg---ctttataaattgatattttagatgatgaa 21139979  T
Q  105 ttaacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||||| ||||||||||||||  |||  |||| |||||| || |||||||||||||  ||||||| ||||||||||    
T  21139978 ttaacaattactaaccctccgcattcgctttatgagtttggtaattgttaattcattataaaaacggtgaaattaga 21139902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 1990170 - 1990225
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaa 62  Q
    |||| |||||||||||||| ||| |||||| |||||||||||||||||||||||||    
T  1990170 tagactattctcatgtttcgcaacccttgtctaatttcacttgttccaatatcaaa 1990225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 18008530 - 18008470
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||| |||| |||||||||||||||||||| ||  ||||||||||||||||| ||||||||    
T  18008530 tagaatattttcatgtttcacaatccttgtctatattcacttgttccaatattaaaacttc 18008470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 6280156 - 6280098
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||| |||| ||||||||| |||||||||| ||| ||||||||||| ||||||||||||    
T  6280156 tagactattttcatgtttcgcaatccttgtctaaattcacttgttcaaatatcaaaact 6280098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 26013326 - 26013280
Alignment:
Q  21 gtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    ||||| |||||||||| ||| ||||||||||||||||||||||||||    
T  26013326 gtttcgcaatccttgtctaaattcacttgttccaatatcaaaacttc 26013280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 22725490 - 22725526
Alignment:
Q  13 attctcatgtttcacaatccttgtttaatttcacttg 49  Q
    ||||||||||||| |||||||||||||||||||||||    
T  22725490 attctcatgtttcgcaatccttgtttaatttcacttg 22725526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 9e-59; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 7 - 181
Target Start/End: Original strand, 12059458 - 12059633
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    ||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||| ||||||| ||||| |||||||| |||||||||||||    
T  12059458 tagattattctcatgtttcgcaatccttgtctaatttcacttcttccaatatcaaaacttcttctttcgatgcttcgctttgatatttgtgatgatgaat 12059557  T
Q  106 taacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||||| |||||||||||||| ||| ||||| |||||||||||||||||||||||  ||||||| ||||||||||    
T  12059558 taacaagcactaaccctccgctgtcgcattatgagtttgatacttgttaattcattataaaaacggtgaaattaga 12059633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 7 - 181
Target Start/End: Original strand, 16148127 - 16148302
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||| ||||||||  |||||||||||||||||||||||| ||||| |||||||||||| ||||||| ||||| |||||||| |||||||||||||    
T  16148127 tagactattatcatgttttgcaatccttgtttaatttcacttgtgccaatttcaaaacttcttatttcgatgcttcgctttgatatttgtgatgatgaat 16148226  T
Q  106 taacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    |||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||  ||||||| ||||||||||    
T  16148227 taacaagtactaaccctccgctgtcgcattatgagtttgatacttgttaattcattataaaaacggtgaaattaga 16148302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 22 - 177
Target Start/End: Original strand, 16384650 - 16384805
Alignment:
Q  22 tttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaattaacaagtactaacc 120  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||  ||||||| |||||| |||||||||||||||||||||    
T  16384650 tttcacaatccttgtctaatttcacttgttccaatatcaaaacttcatctttcgatacttcg-cttgatatttgtgattatgaattaacaagtactaacc 16384748  T
Q  121 ctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaat 177  Q
    |||   | |||| ||||   |||||||||||||||||||||  ||||||| ||||||    
T  16384749 ctcaaatttcgttttattgatttgatacttgttaattcattataaaaacggtgaaat 16384805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 31 - 181
Target Start/End: Original strand, 13799142 - 13799292
Alignment:
Q  31 ccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaattaacaagtactaaccctccgctat 129  Q
    |||||| ||||||||||||||| |||||||||||||||| ||||||| ||||| |||||||| ||||||||||||| |||||||| |||||||||| | |    
T  13799142 ccttgtctaatttcacttgttc-aatatcaaaacttcttctttcgatgcttcgctttgatatttgtgatgatgaatcaacaagtattaaccctccgttgt 13799240  T
Q  130 cgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||  |||| |||||||||||| ||||||||||  ||||||| ||||||||||    
T  13799241 cgctttatgagtttgatacttcttaattcattataaaaacggtgaaattaga 13799292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 161
Target Start/End: Complemental strand, 20412659 - 20412506
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| |||| |||||||||||||||||||| ||| |||||||||||||||||||||||| |  ||||| | | | |  ||||||| || |||||||||||    
T  20412659 tagactattttcatgtttcacaatccttgtctaaattcacttgttccaatatcaaaactccactttcgcttcat-gaattgatatttgagatgatgaatt 20412561  T
Q  107 aacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcatt 161  Q
    ||||| |||||||||||| || |||  | || |||||| || |||||||||||||    
T  20412560 aacaattactaaccctccactttcgcttcatgagtttggtatttgttaattcatt 20412506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 21240470 - 21240408
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt 69  Q
    |||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  21240470 tagactattctcatgtttcgcaatccttgtctaatttcacttgttccaatatcaaaacttctt 21240408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 16354493 - 16354382
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||| | ||||||| ||||   || |||| |||||||||||||    
T  16354493 tagactattctcatgtttcgcaacccttgtctaatttcacttgttccaatattaaaacttcatctttcgatccttc-acttaatatttgtgatgatgaat 16354395  T
Q  106 taacaagtactaa 118  Q
    |||||| ||||||    
T  16354394 taacaattactaa 16354382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 22411517 - 22411406
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| ||||| |||||||| ||| |||||| ||||||||||||||||||||| |||||||| | ||||||| |||||  || |||| |||||||||||||    
T  22411517 tagactattcccatgtttcgcaacccttgtctaatttcacttgttccaatattaaaacttcatctttcgatccttcg-cttaatatttgtgatgatgaat 22411419  T
Q  106 taacaagtactaa 118  Q
    |||||| ||||||    
T  22411418 taacaattactaa 22411406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 20860375 - 20860435
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  20860375 tagagtattcccatgtttcgcaatccttgtctaatttcacttgttccaatatcaaaacttc 20860435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 161
Target Start/End: Original strand, 28763555 - 28763708
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| |||||||||||||   ||||||||| |||||||||||||||||||||| ||||| |  ||||| |  |  |  ||||||| || |||||||||||    
T  28763555 tagactattctcatgttttgtaatccttgtctaatttcacttgttccaatatcgaaactccactttcgct-ttatgaattgatatttgagatgatgaatt 28763653  T
Q  107 aacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcatt 161  Q
    ||||| || || |||||| || |||  |||| ||||||||| |||||||||||||    
T  28763654 aacaaatattagccctccactttcgctttatgagtttgatatttgttaattcatt 28763708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 26194637 - 26194585
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatc 59  Q
    |||| |||||||||||||| |||||||||| ||||||||||||||||||||||    
T  26194637 tagactattctcatgtttcgcaatccttgtctaatttcacttgttccaatatc 26194585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 20898345 - 20898389
Alignment:
Q  19 atgtttcacaatccttgtttaatttcacttgttccaatatcaaaa 63  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||    
T  20898345 atgtttcacaatccttgtctaatttcacttgttcgaatatcaaaa 20898389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 23299296 - 23299236
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||| |||| |||||||||||||||||||| ||| || |||||||| ||||||||||||||    
T  23299296 tagactattttcatgtttcacaatccttgtctaaattaacttgttcaaatatcaaaacttc 23299236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 30818865 - 30818925
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||||||||||||| |||| |||||||||  ||| ||||||||||||||||| ||||||||    
T  30818865 tagattattctcatatttcgcaatccttgactaaattcacttgttccaatattaaaacttc 30818925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 16880152 - 16880092
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||| |||||||||||||  |||||||||| ||| |||| |||||| ||||||||||||||    
T  16880152 tagactattctcatgttttgcaatccttgtctaaattcatttgttcgaatatcaaaacttc 16880092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 20448815 - 20448755
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||| |||||||| ||||  |||||||||| ||| || |||||||||||||||||||||||    
T  20448815 tagactattctcaagtttatcaatccttgtctaaatttacttgttccaatatcaaaacttc 20448755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 20534581 - 20534521
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||| |||||||| ||||  |||||||||| ||| || |||||||||||||||||||||||    
T  20534581 tagactattctcaagtttatcaatccttgtctaaatttacttgttccaatatcaaaacttc 20534521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 20497959 - 20497904
Alignment:
Q  12 tattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    ||||||||  |||| |||||||||| ||| ||||||||||||| ||||||||||||    
T  20497959 tattctcaaatttctcaatccttgtctaaattcacttgttccactatcaaaacttc 20497904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 22635400 - 22635458
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||| |||| ||||||||| |||||||||| ||| |||||||| || ||||||||||||    
T  22635400 tagactattttcatgtttcgcaatccttgtctaaattcacttgatcgaatatcaaaact 22635458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 41802679 - 41802622
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaac 64  Q
    |||| |||| ||||||||| ||||| |||| ||| ||||||||||| |||||||||||    
T  41802679 tagactattttcatgtttcgcaatcattgtctaaattcacttgttcgaatatcaaaac 41802622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 111
Target Start/End: Complemental strand, 2130328 - 2130250
Alignment:
Q  32 cttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaattaacaa 111  Q
    ||||| |||||||| ||||||||||||| ||||||| | ||||||| ||||| |||||||| || ||||||||| ||||||    
T  2130328 cttgtctaatttcatttgttccaatatc-aaacttcatctttcgatccttcg-tttgatatttgagatgatgaactaacaa 2130250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 5e-54; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 7 - 181
Target Start/End: Original strand, 19012691 - 19012866
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||| | ||| |||||||| |||||| || |||    
T  19012691 tagactattctcatgtttcacaatccttgtctaatttcacttgttccaatatcaatacttcttctttcgatgcctcgctttgatatttgtgattatcaat 19012790  T
Q  106 taacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    |||||||||||||||||||||| ||| ||||| | |||||||||||||||||||||  ||||||||||||||||||    
T  19012791 taacaagtactaaccctccgctgtcgcattatgaatttgatacttgttaattcattataaaaacgatgaaattaga 19012866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 27 - 181
Target Start/End: Original strand, 19124028 - 19124183
Alignment:
Q  27 caatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaattaacaagtactaaccctccg 125  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||  |||||||| | |  ||||||||||||||||||||||||||||    
T  19124028 caatccttgtctaatttcacttgttccaatatcaaaacttcttctttcgatgcttcactttgatatttattgtgatgaattaacaagtactaaccctccg 19124127  T
Q  126 ctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
     | ||| ||||| |||||||||||||||||||||||  ||||||| || |||||||    
T  19124128 ttgtcgcattatgagtttgatacttgttaattcattataaaaacggtggaattaga 19124183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 7 - 146
Target Start/End: Complemental strand, 16440181 - 16440041
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||| ||||||| |||||||||| ||||||||||||||| |||||||| ||||||| ||| ||| ||||| ||||||||  ||||||||||||    
T  16440181 tagactattctaatgtttcgcaatccttgtctaatttcacttgttcaaatatcaatacttcttcttttgatgcttcgctttgatattcgtgatgatgaat 16440082  T
Q  106 taacaagtactaaccctccgctatcgtattataagtttgat 146  Q
    |||||||||||| || |||| | |||  |||||| ||||||    
T  16440081 taacaagtactagccatccgttgtcgctttataaatttgat 16440041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 7 - 181
Target Start/End: Original strand, 23698489 - 23698662
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| ||||||||||||||||||  ||||| ||||||||||||||||||||||||| || | | || | |   | |  ||||||| || |||||||||||    
T  23698489 tagactattctcatgtttcacaactcttgtctaatttcacttgttccaatatcaaagctccgtgttagctttat-gaattgatatttgagatgatgaatt 23698587  T
Q  107 aacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||| |||||||||||||   |||  |||| |||||| || |||||||||||||  |||||| |||||||||||    
T  23698588 aacaaatactaaccctccgtgttcgctttatgagtttggtatttgttaattcattataaaaacaatgaaattaga 23698662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 7 - 181
Target Start/End: Original strand, 25858269 - 25858442
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| |||||||||||||  |||||||||| |||||||||||||||||||||||||  | |  ||||| |   | |  ||||||| ||||||||||||||    
T  25858269 tagactattctcatgttttgcaatccttgtctaatttcacttgttccaatatcaaaggtccgctttcgctttat-gaattgatatttgtgatgatgaatt 25858367  T
Q  107 aacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||| |||||||||||| |  |||  |||| |||||| || ||||||||| |||  ||||||| ||||||||||    
T  25858368 aacaaatactaaccctccacgttcgctttatgagtttggtatttgttaatttattataaaaacggtgaaattaga 25858442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 7 - 181
Target Start/End: Original strand, 41653293 - 41653466
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| |||||||||||||||||| |||||| ||||||||||||||||||||||||| || |   |||| |  |  |  ||||||| ||||||||||||||    
T  41653293 tagactattctcatgtttcacaacccttgtctaatttcacttgttccaatatcaaagctccgcgttcgct-ttatgaattgatatttgtgatgatgaatt 41653391  T
Q  107 aacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||| |||||||||||||   |||  |||| |||||  || || ||||||||||  ||||||| ||||||||||    
T  41653392 aacaaatactaaccctccgtgctcgctttatgagttttgtatttattaattcattataaaaacggtgaaattaga 41653466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 20852533 - 20852429
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||| |||||||||||||||||||| ||||||||||| |||||||||||||||||| | ||||||| ||||   ||||||| |||||| ||||||    
T  20852533 tagactattttcatgtttcacaatccttgtctaatttcacttcttccaatatcaaaacttcatctttcgatccttc-acttgatatttgtgattatgaat 20852435  T
Q  106 taacaa 111  Q
    ||||||    
T  20852434 taacaa 20852429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 23256705 - 23256760
Alignment:
Q  12 tattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  23256705 tattctcatgtttcgcaatccttgtctaatttcacttgttccaatatcaaaacttc 23256760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 111
Target Start/End: Original strand, 24371128 - 24371225
Alignment:
Q  13 attctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaattaacaa 111  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||| ||||||| | ||||||| |||||  ||||||| |||||||||||| ||||||    
T  24371128 attctcatgtttcgcaatccttgtctaatttcacttgttccaatatc-aaacttcatctttcgatccttcg-cttgatatttgtgatgatgaaataacaa 24371225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 161
Target Start/End: Complemental strand, 22328899 - 22328746
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| |||||||||||||| ||| |||||| ||||||||||||||||||||||||| || |  | |||  | |  |  ||||||| ||||||||| ||||    
T  22328899 tagaatattctcatgtttcgcaacccttgtctaatttcacttgttccaatatcaaagctccgctgtcg-cattatgaattgatatttgtgatgataaatt 22328801  T
Q  107 aacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcatt 161  Q
    ||||| ||||||||||||| | | | |||||||||||  || |||||||||||||    
T  22328800 aacaaatactaaccctccgttgttgcattataagtttagtatttgttaattcatt 22328746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 24322203 - 24322099
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||| ||||||||| |||||||||| ||||||||||| |||||||||||||||||| | |||||||  ||||  ||||||| |||||| ||||||    
T  24322203 tagactattttcatgtttcgcaatccttgtctaatttcacttattccaatatcaaaacttcatctttcgatcattcg-cttgatatttgtgattatgaat 24322105  T
Q  106 taacaa 111  Q
    ||||||    
T  24322104 taacaa 24322099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 30948937 - 30949047
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||||||||| | ||| |||||| ||||||||||||||||||||| |||||||| | ||||||| |||||  || |||| |||||||||||||    
T  30948937 tagactattctcatgttacgcaa-ccttgtctaatttcacttgttccaatattaaaacttcatctttcgatccttcg-cttaatatttgtgatgatgaat 30949034  T
Q  106 taacaagtactaa 118  Q
    |||||| ||||||    
T  30949035 taacaattactaa 30949047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 160
Target Start/End: Original strand, 23613824 - 23613977
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaac-ttctttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||| ||||||||| |||||||||| ||| ||||||||||||||||||||||| |||  ||||| |   | |  ||||||| || ||||||||||    
T  23613824 tagactattttcatgtttctcaatccttgtctaaattcacttgttccaatatcaaaactttcactttcgcttgat-gaattgatatttgagatgatgaat 23613922  T
Q  106 taacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcat 160  Q
    |||||| |||||||||||| || |||  | || |||||| || ||||||||||||    
T  23613923 taacaattactaaccctccactttcgcttcatgagtttggtaattgttaattcat 23613977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 24366062 - 24366156
Alignment:
Q  85 ttgatatctgtgatgatgaattaacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaatta 179  Q
    ||||||| ||||||||||||||||||| ||||||||||||||  | |  |||| |||||| || |||||||||||||  ||||||| ||||||||    
T  24366062 ttgatatttgtgatgatgaattaacaaatactaaccctccgcgtttgctttatgagtttgttatttgttaattcattataaaaacggtgaaatta 24366156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 7 - 160
Target Start/End: Complemental strand, 23340972 - 23340820
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| |||| ||||||||| |||||||||| ||| ||||||||||| |||||||||||| |  ||||| |  |  |  ||||||| || |||||||||||    
T  23340972 tagactattttcatgtttcgcaatccttgtctaaattcacttgttcgaatatcaaaactccactttcg-ttttatgaattgatatttgagatgatgaatt 23340874  T
Q  107 aacaagtactaaccctccgctatcgtattata-agtttgatacttgttaattcat 160  Q
    || || |||||||||||| || ||| |||||| | ||||||| ||||||||||||    
T  23340873 aataattactaaccctccactttcg-attatacaatttgataattgttaattcat 23340820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 29563599 - 29563541
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||| |||||||||||||| |||||||| | ||| ||||||||||| ||||||||||||    
T  29563599 tagactattctcatgtttcgcaatccttttctaaattcacttgttcgaatatcaaaact 29563541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 24366000 - 24366043
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgt 50  Q
    |||| |||||||||||||| |||||||||| |||||||||||||    
T  24366000 tagactattctcatgtttcgcaatccttgtctaatttcacttgt 24366043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 13004831 - 13004786
Alignment:
Q  12 tattctcatgtttcacaatccttgtttaatttcacttgttccaata 57  Q
    ||||||||||||||| || |||||| |||| |||||||||||||||    
T  13004831 tattctcatgtttcataaaccttgtctaatctcacttgttccaata 13004786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 24609751 - 24609811
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||| |||| ||||||||| ||||| |||| ||| ||||| ||||||||||| ||||||||    
T  24609751 tagactattttcatgtttcgcaatcattgtctaaattcacctgttccaatattaaaacttc 24609811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 100; Significance: 3e-49; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 521159 - 520984
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||||||||||| ||||| |||| |||||||||||||| ||||||||||||||||| ||| ||| ||||| |||||||| |||||||||||||    
T  521159 tagactattctcatgtttcgcaatctttgtctaatttcacttgtttcaatatcaaaacttcttcttttgatgcttcgctttgatatttgtgatgatgaat 521060  T
Q  106 taacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    |||||||||||||||||||||| ||| ||||| ||||||||| |||||||||||||  ||||||  ||||||||||    
T  521059 taacaagtactaaccctccgctgtcgcattatgagtttgatatttgttaattcattataaaaacagtgaaattaga 520984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 33284 - 33180
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||| |||| ||||||||||||||| |||||||||||||||||||||||||||||| | ||||||| |||||  ||||||| |||||| ||||||    
T  33284 tagactattttcatttttcacaatccttgtctaatttcacttgttccaatatcaaaacttcatctttcgatccttcg-cttgatatttgtgattatgaat 33186  T
Q  106 taacaa 111  Q
    ||||||    
T  33185 taacaa 33180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 38591 - 38487
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||| |||| ||||||||||||||| |||||||||||||||||||||||||||||| | ||||||| |||||  ||||||| |||||| ||||||    
T  38591 tagactattttcatttttcacaatccttgtctaatttcacttgttccaatatcaaaacttcatctttcgatccttcg-cttgatatttgtgattatgaat 38493  T
Q  106 taacaa 111  Q
    ||||||    
T  38492 taacaa 38487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 82288 - 82348
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||| |||| || |||||| |||||||||| |||||||  |||||||||||||||||||||    
T  82288 tagactattttcttgtttcgcaatccttgtctaatttctattgttccaatatcaaaacttc 82348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 159476 - 159416
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||| |||| |||||||||||||||||||| ||| |||||||| || ||||| ||| ||||    
T  159476 tagactattttcatgtttcacaatccttgtctaaattcacttgatcgaatattaaagcttc 159416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 3e-49; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 7 - 181
Target Start/End: Original strand, 4256294 - 4256469
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||||||||||| |||||||| | |||||||||||||||||||||||||||||||| ||||||| ||||| |||||||| | |||||||||||    
T  4256294 tagactattctcatgtttctcaatccttatctaatttcacttgttccaatatcaaaacttcttctttcgatgcttcgctttgatatttttgatgatgaat 4256393  T
Q  106 taacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||||||||||||||| |||| ||  ||||| |||||||||||||||||||||||  ||||| | ||||||||||    
T  4256394 taacaagtactaacccttcgctgtctcattatgagtttgatacttgttaattcattataaaaatggtgaaattaga 4256469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 7 - 170
Target Start/End: Original strand, 4982829 - 4982992
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||||||||||| |||||||| | |||||||||||||||||||||||||||||| | |||||||||| ||  ||||||| |||||| ||||||    
T  4982829 tagactattctcatgtttcgcaatccttatctaatttcacttgttccaatatcaaaacttcatctttcgatactacg-cttgatatttgtgattatgaat 4982927  T
Q  106 taacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacg 170  Q
    ||||||||| ||||||||  || |||| ||||   |||||||||||||||||||||  |||||||    
T  4982928 taacaagtattaaccctcaactttcgttttattgatttgatacttgttaattcattacaaaaacg 4982992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 7 - 177
Target Start/End: Complemental strand, 4541575 - 4541405
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||||||||||  |||||||||| |||||||||||||| |||||| |||||||| | ||| |||||||||  ||||||| |||||| || |||    
T  4541575 tagactattctcatgttttgcaatccttgtctaatttcacttgtttcaatataaaaacttcatctttagatacttcg-cttgatatttgtgattataaat 4541477  T
Q  106 taacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaat 177  Q
    || ||||||||||||||||| | |||  || | | |||||||||||||||||||||  ||||||| ||||||    
T  4541476 tatcaagtactaaccctccgttgtcgctttttgaatttgatacttgttaattcattataaaaacggtgaaat 4541405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 7 - 181
Target Start/End: Original strand, 21005205 - 21005378
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||   || ||| |  |  |  ||||||| ||||||||||||||    
T  21005205 tagactattctcatgtttcacaatccttgtctaatttcacttgttccaatatcaaaactctgttgtcgct-ttatgaattgatatttgtgatgatgaatt 21005303  T
Q  107 aacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    |||||  |||||||||||| | |||  |||| |||||| || |||||||||||||  |||||||  |||||||||    
T  21005304 aacaaacactaaccctccgttgtcgctttatgagtttggtatttgttaattcattataaaaacggggaaattaga 21005378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 11997018 - 11997129
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||| | ||||||| |||||   | |||| |||||||||||||    
T  11997018 tagactattctcatgtttcgcaacccttgtctaatttcacttgttccaatattaaaacttcatctttcgatccttcg-cctaatatttgtgatgatgaat 11997116  T
Q  106 taacaagtactaa 118  Q
    |||||| ||||||    
T  11997117 taacaattactaa 11997129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 111
Target Start/End: Original strand, 679182 - 679279
Alignment:
Q  13 attctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaattaacaa 111  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||| ||||||| | ||||||| |||||  ||||||| |||||||||||| ||||||    
T  679182 attctcatgtttcacaatccttgtctaatttcacttgttccagtatc-aaacttcatctttcgatccttcg-cttgatatttgtgatgatgaaataacaa 679279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 8836974 - 8836919
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaa 62  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8836974 tagactattctcatgtttcacaatccttgtctaatttcacttgttccaatatcaaa 8836919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 12348374 - 12348319
Alignment:
Q  12 tattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12348374 tattcccatgtttcacaatccttgtctaatttcacttgttccaatatcaaaacttc 12348319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 19515049 - 19515099
Alignment:
Q  12 tattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaa 62  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19515049 tattctcatgtttcgcaatccttgtttaatttcacttgttccaatatcaaa 19515099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 7 - 160
Target Start/End: Complemental strand, 39271564 - 39271412
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| |||| ||||||||| ||||||| || ||| ||||||||||| |||||||||||| |  |||||||   | |  ||||||| || |||||||||||    
T  39271564 tagactattttcatgtttcgcaatcctagtctaaattcacttgttcgaatatcaaaactccactttcgatttat-gaattgatatttgagatgatgaatt 39271466  T
Q  107 aacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcat 160  Q
    ||||| |||||||||||| || |||  | || ||||||||| ||||||||||||    
T  39271465 aacaattactaaccctccactttcgcttcatgagtttgataattgttaattcat 39271412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 4465471 - 4465570
Alignment:
Q  12 tattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaattaaca 110  Q
    |||| |||||||| ||||||||||| ||||||||||||||||||||| |||||||| | ||||||| |||||  ||||||| | |||| |||||||||||    
T  4465471 tattttcatgttttacaatccttgtctaatttcacttgttccaatattaaaacttcatctttcgatccttcg-cttgatatttatgattatgaattaaca 4465569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 39389143 - 39389032
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||| | ||||||| |||||     |||| |||||||||||||    
T  39389143 tagactattctcatgtttcgcaacccttgtctaatttcacttgttccaatattaaaacttcatctttcgatccttcg-cccaatatttgtgatgatgaat 39389045  T
Q  106 taacaagtactaa 118  Q
    |||||| ||||||    
T  39389044 taacaattactaa 39389032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 6257205 - 6257260
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaa 62  Q
    |||| |||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  6257205 tagactattctcatgtttcgcaatccttgtttaatttcacttgttctaatatcaaa 6257260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 9193697 - 9193752
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaa 62  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||    
T  9193697 tagattattctcatgtttcgcaacccttgtctaatttcacttgttccaatatcaaa 9193752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 9562342 - 9562287
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaa 62  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||    
T  9562342 tagattattctcatgtttcgcaacccttgtctaatttcacttgttccaatatcaaa 9562287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 38877811 - 38877708
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||| ||||||| |||||||||| |||||||||||||||||||||| ||||||| ||||| ||| ||||   ||||||| ||||||||||||     
T  38877811 tagactattctaatgtttcgcaatccttgtctaatttcacttgttccaatatc-aaacttcatttttggatccttc-acttgatatttgtgatgatgaaa 38877714  T
Q  106 taacaa 111  Q
    ||||||    
T  38877713 taacaa 38877708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 8780128 - 8780183
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaa 62  Q
    |||| |||||||||||||||||| |||||| |||||||||||| ||||||||||||    
T  8780128 tagactattctcatgtttcacaacccttgtctaatttcacttggtccaatatcaaa 8780183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 8786967 - 8787022
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaa 62  Q
    |||| |||||||||||||| ||| |||||| |||||||||||||||||||||||||    
T  8786967 tagactattctcatgtttcgcaacccttgtctaatttcacttgttccaatatcaaa 8787022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 33610127 - 33610072
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaa 62  Q
    |||| |||||||||||||| ||| |||||| |||||||||||||||||||||||||    
T  33610127 tagactattctcatgtttcgcaacccttgtctaatttcacttgttccaatatcaaa 33610072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 111
Target Start/End: Complemental strand, 15523429 - 15523331
Alignment:
Q  12 tattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaattaaca 110  Q
    ||||||||||||   |||||||||| || ||||||||||||||||||| ||||||| | ||||||| |||||  ||||||| |||||||||||| |||||    
T  15523429 tattctcatgttgtgcaatccttgtctactttcacttgttccaatatc-aaacttcatctttcgatccttcg-cttgatatttgtgatgatgaaataaca 15523332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 30063643 - 30063699
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaa 63  Q
    |||| |||| |||| |||| |||||||||| ||||||||||||||||||||||||||    
T  30063643 tagactattttcatttttcgcaatccttgtctaatttcacttgttccaatatcaaaa 30063699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 4091108 - 4091053
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaa 62  Q
    |||| |||||||||||||| ||| |||||| |||||||||||| ||||||||||||    
T  4091108 tagactattctcatgtttcgcaacccttgtctaatttcacttggtccaatatcaaa 4091053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 48713850 - 48713795
Alignment:
Q  12 tattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||| ||||||||| |||||||||| | | ||||||||||||||||||||||||||    
T  48713850 tattttcatgtttcgcaatccttgtctcaattcacttgttccaatatcaaaacttc 48713795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 160
Target Start/End: Original strand, 3376196 - 3376348
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| |||| ||||||||| ||||||| || ||| ||||||||||| |||||||||||| |  ||||| |  |  |  ||||||| || |||||||||||    
T  3376196 tagactattttcatgtttcgcaatcctggtctaacttcacttgttcgaatatcaaaactccactttcgct-ttatgaattgatatttgagatgatgaatt 3376294  T
Q  107 aacaagtactaaccctccgctatcgtattata-agtttgatacttgttaattcat 160  Q
    ||||| |||||||||||| || |||  || || ||||||||| ||||||||||||    
T  3376295 aacaattactaaccctccactttcg-cttctacagtttgataattgttaattcat 3376348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 8521841 - 8521899
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||| |||| |||||||||||||||||||| ||| |||||||| || ||||||||||||    
T  8521841 tagactattttcatgtttcacaatccttgtctaaattcacttgctcgaatatcaaaact 8521899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 16487777 - 16487719
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||| |||| |||||||||||||||||||| ||| ||||||||||  ||||||||||||    
T  16487777 tagactattttcatgtttcacaatccttgtctaaattcacttgttagaatatcaaaact 16487719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 12 - 108
Target Start/End: Complemental strand, 17911987 - 17911891
Alignment:
Q  12 tattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaattaa 108  Q
    |||| ||||||||| |||||||||| |||  ||||||||||||||||||||| ||| | ||||||| ||||   ||||||| |||||| |||||||||    
T  17911987 tattttcatgtttcgcaatccttgtctaacatcacttgttccaatatcaaaatttcatctttcgatccttc-acttgatatttgtgattatgaattaa 17911891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 1614322 - 1614262
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||| |||| ||||||||| |||||||||| ||  ||||||||||||||||| ||||||||    
T  1614322 tagactattttcatgtttcgcaatccttgtctatattcacttgttccaatattaaaacttc 1614262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 4460476 - 4460536
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||| |||| |||||||||  ||||||||| ||| ||||||||||||||||| ||||||||    
T  4460476 tagactattttcatgtttcgaaatccttgtctaaattcacttgttccaatattaaaacttc 4460536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 181
Target Start/End: Original strand, 6257290 - 6257378
Alignment:
Q  93 tgtgatgatgaattaacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||||||||||||||||| || |||||||| |   |||  |||| |||||| || |||||||||||||  ||||||| ||||||||||    
T  6257290 tgtgatgatgaattaacaaatattaaccctctgtgttcgctttatgagtttggtatttgttaattcattttaaaaacggtgaaattaga 6257378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 181
Target Start/End: Complemental strand, 8836885 - 8836802
Alignment:
Q  97 atgatgaattaacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||||||||||||| ||||||||||||||  |||  |||| |||||| ||  ||||||||||||  ||||||| ||||||||||    
T  8836885 atgatgaattaacaa-tactaaccctccgcgttcgctttatgagtttggtatgtgttaattcattataaaaacggtgaaattaga 8836802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 23292431 - 23292489
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||| |||| ||||||||  |||||||||| ||| ||||||||||| ||||||||||||    
T  23292431 tagactattttcatgttttgcaatccttgtctaaattcacttgttcgaatatcaaaact 23292489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 2307265 - 2307220
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttc 52  Q
    |||| |||||||||||||| |||||||||| ||||||||| |||||    
T  2307265 tagactattctcatgtttcgcaatccttgtctaatttcacatgttc 2307220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 111
Target Start/End: Complemental strand, 1864683 - 1864605
Alignment:
Q  32 cttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaattaacaa 111  Q
    ||||| |||||||| ||||||||||||| ||||||| | ||||||| ||||| |||||||| || ||||||||| ||||||    
T  1864683 cttgtctaatttcatttgttccaatatc-aaacttcatctttcgatccttcg-tttgatatttgagatgatgaaataacaa 1864605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 46274503 - 46274447
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaa 63  Q
    |||| |||| ||||||||| |||||||||| ||  ||||||||||||||||| ||||    
T  46274503 tagactattttcatgtttcgcaatccttgtctatattcacttgttccaatattaaaa 46274447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 3e-49; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 12410934 - 12410759
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttcttt-ttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||  |||||| ||||  |||||||| |||||||||||||    
T  12410934 tagactattctcatgttttgcaatccttgtctaatttcacttgttccaatatcaaaacttcttccttcgatgcttcactttgatatttgtgatgatgaat 12410835  T
Q  106 taacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    |||||||||||||||||||| | |||  |||| |||||||||||||||||||||||  ||||||| ||||||||||    
T  12410834 taacaagtactaaccctccgttgtcgctttatgagtttgatacttgttaattcattataaaaacggtgaaattaga 12410759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 12 - 181
Target Start/End: Complemental strand, 22171189 - 22171019
Alignment:
Q  12 tattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaattaaca 110  Q
    |||||| ||||||| |||||||||| ||| |||||||||||||||||||||||||||| ||||||| ||||| |||||||| || ||| || ||||||||    
T  22171189 tattcttatgtttcgcaatccttgtctaaattcacttgttccaatatcaaaacttcttctttcgatgcttcgctttgatatttgagattataaattaaca 22171090  T
Q  111 agtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    |||||||| |||||||| |||  |||| | |||||||||||||||||||||  ||||||| |||| |||||    
T  22171089 agtactaatcctccgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaatttaga 22171019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 7 - 161
Target Start/End: Complemental strand, 16677486 - 16677331
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||||||||||  ||||| |||| ||| |||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||| ||||||    
T  16677486 tagactattctcatgttttgcaatctttgtctaaattcacttgttccaatatcaaaacttcttctttcgatgcttcgttttgatatttgtgattatgaat 16677387  T
Q  106 taacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcatt 161  Q
    |||||||||||||||||||| |  ||  |||| | |||| ||||||||||||||||    
T  16677386 taacaagtactaaccctccgttgccgctttatgaatttggtacttgttaattcatt 16677331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 7 - 123
Target Start/End: Original strand, 2953062 - 2953179
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||| | ||||| |||||||| |||||||||||||    
T  2953062 tagactattctcatgtttcgcaatccttgtctaatttcacttgttccaatatcaaaacttcttctttcggtgcttcgctttgatatttgtgatgatgaat 2953161  T
Q  106 taacaagtactaaccctc 123  Q
    | | || |||||||||||    
T  2953162 tgataaatactaaccctc 2953179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 20738750 - 20738588
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| |||||||||||||| ||||||| || |||||||||||||||||||||            |||||| | ||| |||||||| | ||||||||||||    
T  20738750 tagactattctcatgtttcgcaatcctggtctaatttcacttgttccaatat------------ttcgatgcctcgctttgatatttatgatgatgaatt 20738663  T
Q  107 aacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||| |||||||||||||||||||  |||| |||||| || |||||||||||||  ||||||| ||||||||||    
T  20738662 aacaaatactaaccctccgctatcgctttatgagtttggtatttgttaattcattataaaaacggtgaaattaga 20738588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 24166669 - 24166565
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||| | ||||||| |||||  ||||||| ||||||||||||     
T  24166669 tagattattctcatgtttcgcaatccttgtctaatttcacttgttccaatatcaaatcttcatctttcgatccttcg-cttgatatttgtgatgatgaaa 24166571  T
Q  106 taacaa 111  Q
    ||||||    
T  24166570 taacaa 24166565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 31414884 - 31414806
Alignment:
Q  12 tattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgat 89  Q
    |||||||||||||  |||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||| ||||||    
T  31414884 tattctcatgttttgcaatccttgtgtaatttcacttgttccaatatcaaaacttcttctttcgatgcttcgctttgat 31414806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 24165661 - 24165557
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||| | ||||||| |||||  || |||| |||||||||||||    
T  24165661 tagactattctcatgtttcgcaacccttgtctaatttcacttgttccaatattaaaacttcatctttcgatccttcg-cttaatatttgtgatgatgaat 24165563  T
Q  106 taacaa 111  Q
    ||||||    
T  24165562 taacaa 24165557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 7 - 111
Target Start/End: Original strand, 23029250 - 23029353
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||||||||||| |||||||||| ||||||||| |||||||||||| ||||||| | ||||||| |||||  ||||||| ||||||||||||     
T  23029250 tagactattctcatgtttcgcaatccttgtctaatttcacctgttccaatatc-aaacttcatctttcgatccttcg-cttgatatttgtgatgatgaaa 23029347  T
Q  106 taacaa 111  Q
    ||||||    
T  23029348 taacaa 23029353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 31757822 - 31757875
Alignment:
Q  12 tattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||||||||||||| ||| |||||| ||||||||||||||||||||||||||||    
T  31757822 tattctcatgtttcgcaacccttgtctaatttcacttgttccaatatcaaaact 31757875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 34222813 - 34222868
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaa 62  Q
    |||| |||||||||||||| ||| |||||| |||||||||||||||||||||||||    
T  34222813 tagactattctcatgtttcgcaacccttgtctaatttcacttgttccaatatcaaa 34222868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 20169155 - 20169274
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttc-gttttgatatctgtgatgatgaat 105  Q
    |||| |||| |||||||||||||||||||  ||| ||||||||||| |||||||||||| |  ||||| |  ||| |  ||||||| || ||||||||||    
T  20169155 tagactattttcatgtttcacaatccttgcctaaattcacttgttcgaatatcaaaactccactttcgtt--ttctgaattgatatttgagatgatgaat 20169252  T
Q  106 taacaagtactaaccctccgct 127  Q
    |||||| ||||||||| |||||    
T  20169253 taacaattactaaccccccgct 20169274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 19890149 - 19890091
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||| |||||||||||||| ||||| |||| ||||||| ||||||||||||| ||||||    
T  19890149 tagactattctcatgtttcgcaatctttgtctaatttctcttgttccaatataaaaact 19890091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 21833334 - 21833276
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||| |||| ||||||||| |||||||||| ||| ||||||||||| ||||||||||||    
T  21833334 tagactattttcatgtttcgcaatccttgtctaaattcacttgttcgaatatcaaaact 21833276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 21382680 - 21382627
Alignment:
Q  12 tattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||| ||||||||| |||||||||| ||| ||||||||||| ||||||||||||    
T  21382680 tattttcatgtttcgcaatccttgtctaaattcacttgttcgaatatcaaaact 21382627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 23435726 - 23435673
Alignment:
Q  12 tattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||||||||||||| ||||||||||  || ||||||||||| ||||||||||||    
T  23435726 tattctcatgtttcgcaatccttgtccaaattcacttgttcgaatatcaaaact 23435673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 23447093 - 23447040
Alignment:
Q  12 tattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||||||||||||| ||||||||||  || ||||||||||| ||||||||||||    
T  23447093 tattctcatgtttcgcaatccttgtccaaattcacttgttcgaatatcaaaact 23447040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 23114664 - 23114613
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatat 58  Q
    |||| ||||||||||||||  ||||||||| |||||||| ||||||||||||    
T  23114664 tagactattctcatgtttcgtaatccttgtctaatttcatttgttccaatat 23114613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 21390077 - 21390019
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||| |||| ||||||||| |||||||||| ||| |||||| |||| ||||||||||||    
T  21390077 tagactattttcatgtttcgcaatccttgtctaaattcactagttcgaatatcaaaact 21390019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 25577350 - 25577392
Alignment:
Q  23 ttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||||||||||||| ||| ||||||||||| ||||||||||||    
T  25577350 ttcacaatccttgtctaaattcacttgttcgaatatcaaaact 25577392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 181
Target Start/End: Original strand, 31757886 - 31757970
Alignment:
Q  97 atgatgaattaacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||||||||||||| ||| ||||||||| | ||| ||||| ||||||  | ||||||||||||    |||||| ||||||||||    
T  31757886 atgatgaattaacaaatacgaaccctccgttgtcgcattatgagtttggcatttgttaattcatcatcaaaacggtgaaattaga 31757970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 3e-49; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 15 - 181
Target Start/End: Complemental strand, 13070173 - 13070007
Alignment:
Q  15 tctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaattaacaagt 113  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||| ||| ||||| |||| ||| |||||||||||||||||||||    
T  13070173 tctcatgtttcgcaatccttgtctaatttcacttgttccaatatcaaaacttcttcttttgatgcttcgatttg-tatttgtgatgatgaattaacaagt 13070075  T
Q  114 actaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    |||||||||||||| ||| ||||  |||||||||||||||||||||||  ||||||| ||||||||||    
T  13070074 actaaccctccgctgtcgcattacgagtttgatacttgttaattcattataaaaacggtgaaattaga 13070007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 7 - 177
Target Start/End: Original strand, 8685526 - 8685695
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| ||||||||||||||||||||||||| |||||| |||||||||||||| |||||||| | ||||||||||||| || ||||| |||||| ||||||    
T  8685526 tagactattctcatgtttcacaatccttgtctaattt-acttgttccaatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaat 8685623  T
Q  106 taacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaat 177  Q
    ||||||||||||||||| |||| |||  |||| | |||||||||||||||||||||  ||||||| ||||||    
T  8685624 taacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat 8685695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 12 - 161
Target Start/End: Complemental strand, 7908927 - 7908777
Alignment:
Q  12 tattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaattaaca 110  Q
    ||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||| ||| |||| ||||||||||||||||||    
T  7908927 tattctcatatttcataatccttgtctaatttcacttgttccaatatcaaaacttcttctttcgatgcttcgctttaatatttgtgatgatgaattaaca 7908828  T
Q  111 agtactaaccctccgctatcgtattataagtttgatacttgttaattcatt 161  Q
    | |||||||| |||||| |||  |||| |||||| || |||||||||||||    
T  7908827 aatactaaccttccgctgtcgctttatgagtttggtatttgttaattcatt 7908777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 13418798 - 13418622
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttg-atatctgtgatgatgaa 104  Q
    |||| |||||||||||||  ||||| |||| |||||||||||||||||||||||||||||||| ||||||| |||  ||||  |||| ||||||||| ||    
T  13418798 tagactattctcatgttttgcaatcgttgtctaatttcacttgttccaatatcaaaacttcttctttcgatgcttttttttttatatttgtgatgataaa 13418699  T
Q  105 ttaacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||||||||||||||||||| | |||  |||| |||||||||||| ||||||||||  | ||||||||||||||||    
T  13418698 ttaacaagtactaaccctccgttgtcgctttatgagtttgatactttttaattcattatataaacgatgaaattaga 13418622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 7 - 181
Target Start/End: Original strand, 42244229 - 42244403
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||||||||||   | ||||||| ||||||||||||||| |||||||||||||||| ||| ||| ||||  |||||||| |||||||||||||    
T  42244229 tagactattctcatgttttgtagtccttgtctaatttcacttgttc-aatatcaaaacttcttcttttgatgcttcactttgatatttgtgatgatgaat 42244327  T
Q  106 taacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||||||| |||||||||| | |||  |||| |||||||   || ||||||||||  ||||||| ||||||||||    
T  42244328 taacaagtattaaccctccgttgtcgctttatgagtttgaatattcttaattcattataaaaacggtgaaattaga 42244403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 22039249 - 22039079
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| |||||||||||||| |||||||||| |||||||||||||| |||||||||| || | |   ||  | |  |  ||||||| ||||||||||||||    
T  22039249 tagactattctcatgtttcgcaatccttgtctaatttcacttgtttcaatatcaaagctccct---cgc-attatgaattgatatttgtgatgatgaatt 22039154  T
Q  107 aacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||| ||||||||||||| | ||| ||||| |||||| || |||||||||||||  ||||||| ||||||||||    
T  22039153 aacaaatactaaccctccgatgtcgcattatgagtttggtatttgttaattcattataaaaacggtgaaattaga 22039079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 7 - 181
Target Start/End: Original strand, 20224911 - 20225085
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||| |||| ||||||||||| ||| ||| ||||||| || |||||| |||||||| | ||| ||| | ||  ||  |||| |||||||||||||    
T  20224911 tagactattttcatatttcacaatccgtgtctaaattcacttatttcaatattaaaacttcatcttttgatccatcactta-atatttgtgatgatgaat 20225009  T
Q  106 taacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||||||||||||||||| || ||| ||||| ||||||||||||||||||||| |  ||||||| |||| |||||    
T  20225010 taacaagtactaaccctccactttcgcattatgagtttgatacttgttaattcactataaaaacggtgaatttaga 20225085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 17775186 - 17775090
Alignment:
Q  13 attctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaattaac 109  Q
    ||||||||||||| |||| ||||||||||||||||||||| |||||||||||||| | ||||||||||||   ||||||| |||||| ||||||||||    
T  17775186 attctcatgtttcgcaattcttgtttaatttcacttgttcaaatatcaaaacttcatctttcgatacttc-ccttgatatttgtgattatgaattaac 17775090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 19076487 - 19076391
Alignment:
Q  13 attctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaattaac 109  Q
    ||||||||||||| |||| ||||||||||||||||||||| |||||||||||||| | ||||||||||||   ||||||| |||||| ||||||||||    
T  19076487 attctcatgtttcgcaattcttgtttaatttcacttgttcaaatatcaaaacttcatctttcgatacttc-ccttgatatttgtgattatgaattaac 19076391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 17051141 - 17050968
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| |||||||||||||| ||| |||||| ||||||||||||||||||||||||| || |  | |||  | |  |  ||||||| ||||||||||||||    
T  17051141 tagactattctcatgtttcgcaacccttgtctaatttcacttgttccaatatcaaagctccgctgtcg-cattatgaattgatatttgtgatgatgaatt 17051043  T
Q  107 aacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||| | ||||||||||| | ||| ||||| |||| | ||  ||||||||||||  || |||| ||||||||||    
T  17051042 aacaaattctaaccctccgttgtcgcattatgagttgggtatgtgttaattcattataacaacggtgaaattaga 17050968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 17209992 - 17209819
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| |||||||||||||  ||| |||||| ||||||||||||||||||||| ||| || |   |||  |  || |  ||||||| || |||||||||||    
T  17209992 tagactattctcatgttttgcaacccttgtctaatttcacttgttccaatattaaagctccgcgttcacttttt-gaattgatatttgagatgatgaatt 17209894  T
Q  107 aacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||| ||||||||||||||  |||  |||| |||||| || |||||||||||||  ||||||| ||||||||||    
T  17209893 aacaaatactaaccctccgcattcgctttatgagtttggtatttgttaattcattataaaaacggtgaaattaga 17209819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 10850399 - 10850510
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||||||||||| ||  |||||| ||||||||||||||||||||| |||||||| | ||||||| |||||  || |||| |||||||||||||    
T  10850399 tagactattctcatgtttcgcagcccttgtctaatttcacttgttccaatattaaaacttcatctttcgatccttcg-cttaatatttgtgatgatgaat 10850497  T
Q  106 taacaagtactaa 118  Q
    ||| || ||||||    
T  10850498 taaaaattactaa 10850510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 11577431 - 11577491
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||| |||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  11577431 tagactattttcatgtttcgcaatccttgtctaatttcacttgttccaatatcaaaacttc 11577491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 9774762 - 9774817
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaa 62  Q
    |||| ||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  9774762 tagactattctcatgtttcacaatccttatctaatttcacttgttccaatatcaaa 9774817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 17023647 - 17023547
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||| ||||||||| |||||||||| ||||||||||||||||||||| |||||||| | ||||||| | |||  || |||| |||||||||||||    
T  17023647 tagactattttcatgtttcgcaatccttgtctaatttcacttgttccaatattaaaacttcatctttcgatccatcg-cttaatatttgtgatgatgaat 17023549  T
Q  106 ta 107  Q
    ||    
T  17023548 ta 17023547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 85 - 181
Target Start/End: Complemental strand, 17042051 - 17041955
Alignment:
Q  85 ttgatatctgtgatgatgaattaacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||||| ||||||||||||||||||| ||||||||||||  | ||| ||||| |||||| || || ||||||||||  ||||||  ||||||||||    
T  17042051 ttgatatttgtgatgatgaattaacaaatactaaccctccattgtcgcattatgagtttggtatttcttaattcattataaaaacagtgaaattaga 17041955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 9762307 - 9762362
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaa 62  Q
    |||| ||||||||||||||||||||||| | |||||||| ||||||||||||||||    
T  9762307 tagactattctcatgtttcacaatccttatctaatttcatttgttccaatatcaaa 9762362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 157
Target Start/End: Original strand, 14347762 - 14347911
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| |||| |||||||||||||||||||| ||| ||||||||||| |||||||||||| |  ||||| |  |  |  ||||||| || |||||||||||    
T  14347762 tagactattttcatgtttcacaatccttgtctaaattcacttgttcgaatatcaaaactccactttcg-ttttatgaattgatatttgagatgatgaatt 14347860  T
Q  107 aacaagtactaaccctccgctatcgtattata-agtttgatacttgttaatt 157  Q
    | ||| |||||||||||| || ||| ||| || ||||||||| |||||||||    
T  14347861 accaattactaaccctccactttcg-attctacagtttgataattgttaatt 14347911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 19566677 - 19566735
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    ||||||||| ||||||||  |||||||||| ||||||||||||||| ||||||||||||    
T  19566677 tagattattttcatgttttgcaatccttgtctaatttcacttgttcgaatatcaaaact 19566735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 7 - 116
Target Start/End: Original strand, 27992170 - 27992278
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| ||||||||||||||  ||||||||| |||||||| ||||||||||||| ||||||| | |||||||  ||||  ||||||| || |||||||||     
T  27992170 tagactattctcatgtttcgtaatccttgtctaatttcatttgttccaatatc-aaacttcatctttcgatctttcg-cttgatatttgagatgatgaaa 27992267  T
Q  106 taacaagtact 116  Q
    |||||||||||    
T  27992268 taacaagtact 27992278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 6237268 - 6237148
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||||||||||| ||| | |||| |||||||||||||| |||||| |||| | | | ||||||| |||||  || |||| |||||||||||||    
T  6237268 tagactattctcatgtttcgcaacctttgtctaatttcacttgtttcaatattaaaaatccatctttcgatccttcg-cttaatatttgtgatgatgaat 6237170  T
Q  106 taacaagtact-aaccctccgc 126  Q
    |||||| |||| ||||||||||    
T  6237169 taacaattactaaaccctccgc 6237148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 1993859 - 1993799
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||| ||| |||||||||| ||| |||||| ||||||||||||||||||||| ||||||||    
T  1993859 tagactatactcatgtttcgcaacccttgtctaatttcacttgttccaatattaaaacttc 1993799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 1999018 - 1998958
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||| ||| |||||||||| ||| |||||| ||||||||||||||||||||| ||||||||    
T  1999018 tagactatactcatgtttcgcaacccttgtctaatttcacttgttccaatattaaaacttc 1998958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 124
Target Start/End: Complemental strand, 13605437 - 13605331
Alignment:
Q  17 tcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaattaacaagtact 116  Q
    ||||||||| |||||||||| ||| |||||||||||||||||||||| | |  ||||| |  |  |  ||||||| || |||||||||||||||| ||||    
T  13605437 tcatgtttcgcaatccttgtctaaattcacttgttccaatatcaaaaatccactttcg-ttttatgaattgatatttgagatgatgaattaacaattact 13605339  T
Q  117 aaccctcc 124  Q
    ||||||||    
T  13605338 aaccctcc 13605331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 11399288 - 11399230
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||| |||| ||||||||| |||||||||| ||| ||||||||||| ||||||||||||    
T  11399288 tagactattttcatgtttcgcaatccttgtctaaattcacttgttcaaatatcaaaact 11399230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 14137434 - 14137492
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||| |||| ||||||||| |||||||||| ||| ||||||||||| ||||||||||||    
T  14137434 tagactattttcatgtttcgcaatccttgtctaaattcacttgttcgaatatcaaaact 14137492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 25055426 - 25055368
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||| |||| ||||||||| |||||||||| ||| ||||||||||| ||||||||||||    
T  25055426 tagactattttcatgtttcgcaatccttgtctaaattcacttgttcgaatatcaaaact 25055368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 36079472 - 36079414
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||| |||| ||||||||| |||||||||| ||| ||||||||||| ||||||||||||    
T  36079472 tagactattttcatgtttcgcaatccttgtctaaattcacttgttcgaatatcaaaact 36079414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 17023535 - 17023487
Alignment:
Q  133 attataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||| |||||||||||||||||||||||  ||||||| ||||||||||    
T  17023535 attatgagtttgatacttgttaattcattataaaaacggtgaaattaga 17023487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 3280243 - 3280188
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaa 62  Q
    |||| |||| ||||||||| |||||||||| ||| ||||||||||| |||||||||    
T  3280243 tagactattttcatgtttcgcaatccttgtctaaattcacttgttcgaatatcaaa 3280188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 17576935 - 17576985
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaata 57  Q
    |||| ||||||||||||||| || |||||| |||| |||||||||||||||    
T  17576935 tagactattctcatgtttcataaaccttgtctaatctcacttgttccaata 17576985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 8532299 - 8532239
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||| |||| ||||||||  |||||||||| |||  |||||||||||||||| ||||||||    
T  8532299 tagactattttcatgttttgcaatccttgtctaaactcacttgttccaatattaaaacttc 8532239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 40846884 - 40846824
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||| |||| ||||||||  |||||||||| ||  ||||||||||||||||| ||||||||    
T  40846884 tagactattttcatgttttgcaatccttgtctatattcacttgttccaatattaaaacttc 40846824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 96; Significance: 8e-47; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 38652565 - 38652390
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| ||||| |||||||| |||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||||  |||||||| |||||||||||||    
T  38652565 tagactattcccatgtttcgcaatccttgtctaatttcacttgtttcaatatcaaaacttcttctttcgatgcttcactttgatatttgtgatgatgaat 38652466  T
Q  106 taacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    |||||||||| ||||||||| | |||  |||| |||||||||||||||||||||||  ||||||| ||||||||||    
T  38652465 taacaagtaccaaccctccgttgtcgctttatgagtttgatacttgttaattcattataaaaacggtgaaattaga 38652390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 8561999 - 8562118
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||| ||||||||| |||||||||| ||||||||||||||||||||| |||||||||| ||||||| ||||| |||||||| |||||||||||||    
T  8561999 tagactattatcatgtttcgcaatccttgtctaatttcacttgttccaatataaaaacttcttctttcgatgcttcgctttgatatttgtgatgatgaat 8562098  T
Q  106 taacaagtactaaccctccg 125  Q
    ||||||||||||||||||||    
T  8562099 taacaagtactaaccctccg 8562118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 7 - 161
Target Start/End: Complemental strand, 9192645 - 9192490
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||| || |||| || ||||  |||||||| |||||||||||||    
T  9192645 tagactattctcatgtttcacaatccatgtctaatttcacttgttctaatatcaaaactttttctttcaatgcttcactttgatatttgtgatgatgaat 9192546  T
Q  106 taacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcatt 161  Q
    |||||| |||||||| |||| | |||  |||| |||||| || |||||||||||||    
T  9192545 taacaaatactaaccgtccgttgtcgctttatgagtttggtatttgttaattcatt 9192490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 7 - 181
Target Start/End: Original strand, 3771872 - 3772045
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| |||||||||||||| |||||||| | ||||||||||||||||||||||||| ||||   |||| |   | |  ||||||| ||||||||||||||    
T  3771872 tagactattctcatgtttcgcaatccttttctaatttcacttgttccaatatcaaagcttcgcgttcgctttat-gaattgatatttgtgatgatgaatt 3771970  T
Q  107 aacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||| ||||||||||||||  |||  |||| ||||||||| |||||||||||||  ||||||| ||||||||||    
T  3771971 aacaaatactaaccctccgcgttcgctttatgagtttgatatttgttaattcattataaaaacggtgaaattaga 3772045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 7 - 175
Target Start/End: Complemental strand, 5675877 - 5675706
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||||||||||  |||| ||||||| |||||||||||| ||||||||||||||||| ||||| |||||||  ||||||| |||||| ||||||    
T  5675877 tagactattctcatgttttgcaatacttgtttgatttcacttgtttcaatatcaaaacttcttctttcggtacttcg-cttgatatttgtgattatgaat 5675779  T
Q  106 taacaagtactaaccctccgctatcgt---attataagtttgatacttgttaattcattggaaaaacgatgaa 175  Q
     |||||||||||||||||| || | ||    |||| | |||||||||||||||||||||  ||||||| ||||    
T  5675778 aaacaagtactaaccctcctctgttgtcactttatgaatttgatacttgttaattcattataaaaacggtgaa 5675706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 12807862 - 12807982
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||||| ||||| ||| |||||| ||||||||||||||||||||| |||||||| | ||||||| |||||  || |||| |||||||||||||    
T  12807862 tagactattctcaagtttcgcaacccttgtctaatttcacttgttccaatattaaaacttcatctttcgatccttcg-attaatatttgtgatgatgaat 12807960  T
Q  106 taacaagtact-aaccctccgc 126  Q
    |||||| |||| ||||||||||    
T  12807961 taacaattactaaaccctccgc 12807982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 25190592 - 25190488
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||||||||||| |||||||||| ||||||||||||||||||| |||||||||| | ||| |||  ||||  ||||||| |||||| ||||||    
T  25190592 tagactattctcatgtttcgcaatccttgtctaatttcacttgttccaatgtcaaaacttcatcttttgatctttcg-cttgatatttgtgattatgaat 25190494  T
Q  106 taacaa 111  Q
    ||||||    
T  25190493 taacaa 25190488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 33330711 - 33330794
Alignment:
Q  27 caatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaattaaca 110  Q
    |||||||||| |||||||||||||||||||||||||| ||| | |||||||||||||  ||||||| |||||| |||||||||||    
T  33330711 caatccttgtctaatttcacttgttccaatatcaaaatttcatctttcgatacttcg-cttgatatttgtgattatgaattaaca 33330794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 111
Target Start/End: Complemental strand, 17169188 - 17169090
Alignment:
Q  12 tattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaattaaca 110  Q
    |||||||||||||| |||||||||| ||| ||||||| |||||||||| ||||||| | ||||||| |||||  ||||||| |||||||||||| |||||    
T  17169188 tattctcatgtttcgcaatccttgtctaaattcacttattccaatatc-aaacttcatctttcgatccttcg-cttgatatttgtgatgatgaaataaca 17169091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 111
Target Start/End: Complemental strand, 17174748 - 17174650
Alignment:
Q  12 tattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaattaaca 110  Q
    |||||||||||||| |||||||||| ||| ||||||| |||||||||| ||||||| | ||||||| |||||  ||||||| |||||||||||| |||||    
T  17174748 tattctcatgtttcgcaatccttgtctaaattcacttattccaatatc-aaacttcatctttcgatccttcg-cttgatatttgtgatgatgaaataaca 17174651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 31594293 - 31594177
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| |||| |||||||||||||||||||| ||| ||||||||||  |||||||||||| |  |||| ||  |  |  ||||||| || |||||||||||    
T  31594293 tagactattttcatgtttcacaatccttgtctaaattcacttgtttgaatatcaaaactccactttc-attttatgaattgatatttgagatgatgaatt 31594195  T
Q  107 aacaagtactaaccctcc 124  Q
    ||||| ||||||||||||    
T  31594194 aacaattactaaccctcc 31594177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 12345638 - 12345698
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||| |||| ||||||||| |||||||||| |||| ||||||||| |||||||||||||||    
T  12345638 tagactattttcatgtttctcaatccttgtctaatgtcacttgttgcaatatcaaaacttc 12345698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 39418 - 39536
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| |||||||||||||| ||| |||||| |||||| |||||||||||||||||| || |   |||| |   | |  ||||||| || |||||||||||    
T  39418 tagactattctcatgtttcgcaacccttgtctaatttaacttgttccaatatcaaagctccgcgttcgctttat-gaattgatatttgagatgatgaatt 39516  T
Q  107 aacaagtactaaccctccgc 126  Q
    ||||| ||||||||||||||    
T  39517 aacaattactaaccctccgc 39536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 43701255 - 43701313
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||| |||| ||||||||| |||||||||| ||| |||| |||||||||||||||||||    
T  43701255 tagactattttcatgtttcgcaatccttgtctaaattcatttgttccaatatcaaaact 43701313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 20058848 - 20058964
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| |||| ||||||||  |||||||||| ||| |||| ||||||||||||||||||| |  ||||| |  |  |  ||||||| || |||||||||||    
T  20058848 tagactattttcatgttttgcaatccttgtctaaattcatttgttccaatatcaaaactccactttcgct-ttatgaattgatatttgagatgatgaatt 20058946  T
Q  107 aacaagtactaaccctcc 124  Q
    ||||| ||||||||||||    
T  20058947 aacaattactaaccctcc 20058964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 10731543 - 10731483
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||| |||| ||||||||| ||| |||||| ||| ||||||||||||||||| ||||||||    
T  10731543 tagactattttcatgtttcgcaaaccttgtctaaattcacttgttccaatattaaaacttc 10731483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 10945312 - 10945252
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||| |||| ||||||||| ||| |||||| ||| ||||||||||||||||| ||||||||    
T  10945312 tagactattttcatgtttcgcaaaccttgtctaaattcacttgttccaatattaaaacttc 10945252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 39043171 - 39043225
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaa 61  Q
    |||| |||| |||||||||||||||||||| ||| |||| |||||| ||||||||    
T  39043171 tagactattttcatgtttcacaatccttgtctaaattcatttgttcgaatatcaa 39043225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 11048695 - 11048655
Alignment:
Q  27 caatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||||||||| ||| ||||||||||| ||||||||||||||    
T  11048695 caatccttgtctaaattcacttgttcgaatatcaaaacttc 11048655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 11922125 - 11922185
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||| |||| ||||||||  |||||||||| ||| ||||||||||||||||| || |||||    
T  11922125 tagactattttcatgttttgcaatccttgtctaaattcacttgttccaatattaagacttc 11922185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 111
Target Start/End: Complemental strand, 55268154 - 55268076
Alignment:
Q  32 cttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaattaacaa 111  Q
    ||||| |||||||| ||||||||||||| ||||||| | ||||||| ||||| |||||||| || ||||||||| ||||||    
T  55268154 cttgtctaatttcatttgttccaatatc-aaacttcatctttcgatccttcg-tttgatatttgagatgatgaaataacaa 55268076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 173149 - 172974
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| ||||||||| |||  |||||||||| ||||||||||| ||||||||||||||||| || ||||||| ||||| |||||||| |||||||||||||    
T  173149 tagactattctcatattttgcaatccttgtctaatttcactttttccaatatcaaaacttattctttcgatgcttcgctttgatatttgtgatgatgaat 173050  T
Q  106 taacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    |||||||||||||||||||  | |||  |||| |||||||||||||||||||||||   |||||| ||||||||||    
T  173049 taacaagtactaaccctccattgtcgctttatgagtttgatacttgttaattcattatgaaaacggtgaaattaga 172974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 78; Significance: 4e-36; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 4488 - 4609
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| |||||||||||||  |||||||||| |||||||| |||||| |||||||||||||||| ||||||||||||  |||||||| |||||||||||||    
T  4488 tagactattctcatgttttgcaatccttgtctaatttcaattgttctaatatcaaaacttcttctttcgatacttcactttgatatttgtgatgatgaat 4587  T
Q  106 taacaagtactaaccctccgct 127  Q
    ||||||||||||||||||||||    
T  4588 taacaagtactaaccctccgct 4609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 43991 - 44049
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||| |||| ||||||||| |||||||||| ||| ||||||||||| ||||||||||||    
T  43991 tagactattttcatgtttcgcaatccttgtctaaattcacttgttcgaatatcaaaact 44049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 7 - 181
Target Start/End: Original strand, 22104 - 22277
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||| |  | ||| |   | |  ||||||| ||||||||||||||    
T  22104 tagactattctcatgtttcgcaatccttgtctaatttcacttgttccaatatcaaaactccgctgtcgctttat-gaattgatatttgtgatgatgaatt 22202  T
Q  107 aacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||| |||||||||||| || |||  |||| |||||| || |||||||||||||  ||||||| ||||||||||    
T  22203 aacaaatactaaccctccactgtcggtttatgagtttggtatttgttaattcattataaaaacggtgaaattaga 22277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0713 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 181
Target Start/End: Original strand, 6386 - 6559
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| ||||||||| |||| |||||||||| ||||||||||||||||||||||||| || | | |||| |   | |  ||||||| ||||||||||||||    
T  6386 tagactattctcatatttcgcaatccttgtctaatttcacttgttccaatatcaaagctccgtgttcgctttat-gaattgatatttgtgatgatgaatt 6484  T
Q  107 aacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
    ||||| ||||| ||||||||  |||  |||| |||||| || |||||||||||||   |||||| ||||||||||    
T  6485 aacaaatactatccctccgcgttcgctttatgagtttggtatttgttaattcattatcaaaacggtgaaattaga 6559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0855 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 3875 - 3772
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| | ||||||| |||| | ||||||| ||||||||||||     
T  3875 tagactattctcatgtttcacaatccttgtctaatttcacttgttccaatatc-aaacttcatctttcgatccttc-tcttgatatttgtgatgatgaaa 3778  T
Q  106 taacaa 111  Q
    ||||||    
T  3777 taacaa 3772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 4040 - 3937
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| | ||||||| |||| | ||||||| ||||||||||||     
T  4040 tagactattctcatgtttcacaatccttgtctaatttcacttgttccaatatc-aaacttcatctttcgatccttc-tcttgatatttgtgatgatgaaa 3943  T
Q  106 taacaa 111  Q
    ||||||    
T  3942 taacaa 3937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 54; Significance: 9e-22; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 7 - 111
Target Start/End: Original strand, 22418 - 22522
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||| | ||||||| |||||  ||||||| |||||| | ||||    
T  22418 tagattattctcatgtttcgctatccttgtctaatttcacttgttccaatatcaaaacttcatctttcgattcttcg-cttgatatttgtgattaagaat 22516  T
Q  106 taacaa 111  Q
    ||||||    
T  22517 taacaa 22522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 181
Target Start/End: Original strand, 53923 - 54095
Alignment:
Q  13 attctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaattaac-- 109  Q
    ||||||||||||| |||||||||  | ||||||||| |||||||||||||  ||| | ||||||| | |||  ||||||| |||||||||||||||||      
T  53923 attctcatgtttcgcaatccttgcctgatttcactttttccaatatcaaattttcatctttcgatccatcg-cttgatatttgtgatgatgaattaacaa 54021  T
Q  110 --aagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacgatgaaattaga 181  Q
      ||||||||||||  |  | |||  |||| ||||||||||||||||||| |||  ||||||| ||||||||||    
T  54022 gtaagtactaacccaacattgtcgctttatgagtttgatacttgttaatttattataaaaacggtgaaattaga 54095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 7 - 170
Target Start/End: Complemental strand, 14500 - 14337
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc-tttttcgatacttcgttttgatatctgtgatgatgaat 105  Q
    |||| ||||| |||||||  |||||||||| |||||||| ||||||||||||||||||||| | |||||||||||||  ||||||| |||||| ||||||    
T  14500 tagactattcacatgttttgcaatccttgtataatttcatttgttccaatatcaaaacttcatctttcgatacttcg-cttgatatttgtgattatgaat 14402  T
Q  106 taacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcattggaaaaacg 170  Q
    |||||| ||  |||||||  || |||  ||||   ||| |||||||||||||||||  |||||||    
T  14401 taacaactatcaaccctcgcctttcgatttattgatttaatacttgttaattcattataaaaacg 14337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 168592 - 168544
Alignment:
Q  14 ttctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaa 62  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||    
T  168592 ttctcatgtttcgcaatccttgtctaatttcacttgttccaatatcaaa 168544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 8902 - 9020
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| |||||||||| ||  |||||||||| ||||||||||||||||||||||||| || | | |||| |  |  |  ||||||| ||||||||||||||    
T  8902 tagactattctcatgctttgcaatccttgtctaatttcacttgttccaatatcaaagctccgtgttcgct-ttatgaattgatatttgtgatgatgaatt 9000  T
Q  107 aacaagtactaaccctccgc 126  Q
    || || ||||||||||||||    
T  9001 aaaaaatactaaccctccgc 9020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 160
Target Start/End: Original strand, 8508 - 8660
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttctttttcgatacttcgttttgatatctgtgatgatgaatt 106  Q
    |||| |||| ||||||||| |||||||||| ||| ||||||||||| |||||||||| | |  ||||| |  |  |  ||||||| || |||||||||||    
T  8508 tagactattttcatgtttcgcaatccttgtctaaattcacttgttcgaatatcaaaaatccaatttcg-ttttatgaattgatatttgagatgatgaatt 8606  T
Q  107 aacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcat 160  Q
    ||||| |||||||||||| || |||  ||   ||||||||| ||||||||||||    
T  8607 aacaattactaaccctccactttcgcttttacagtttgataattgttaattcat 8660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 12223 - 12281
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||| |||| ||||||||| |||||||||| ||| ||||||||||| ||||||||||||    
T  12223 tagactattttcatgtttcgcaatccttgtctaaattcacttgttcgaatatcaaaact 12281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 14295 - 14353
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||| |||| ||||||||| |||||||||| ||| ||||||||||| ||||||||||||    
T  14295 tagactattttcatgtttcgcaatccttgtctaaattcacttgttcaaatatcaaaact 14353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0773 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0773
Description:

Target: scaffold0773; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 160
Target Start/End: Complemental strand, 1436 - 1372
Alignment:
Q  96 gatgatgaattaacaagtactaaccctccgctatcgtattataagtttgatacttgttaattcat 160  Q
    |||||||||||||||| |||||||||||| || |||  | || ||||||||| ||||||||||||    
T  1436 gatgatgaattaacaattactaaccctccactttcgcttcatgagtttgataattgttaattcat 1372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0773; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 1519 - 1464
Alignment:
Q  12 tattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||| |||| |||| |||||||||| ||| ||||||||||| ||||||||||||||    
T  1519 tattttcatatttcgcaatccttgtctaaattcacttgttcgaatatcaaaacttc 1464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 6819 - 6761
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||| |||| |||||||||||||||||||| ||| |||||||  || ||||||||||||    
T  6819 tagactattttcatgtttcacaatccttgtctaaattcactttatcgaatatcaaaact 6761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 11433 - 11375
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||| |||| |||||||||||||||||||| ||| |||||||  || ||||||||||||    
T  11433 tagactattttcatgtttcacaatccttgtctaaattcactttatcgaatatcaaaact 11375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 9428 - 9370
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaact 65  Q
    |||| |||| |||||||||||||||||||| ||| |||||||  || ||||||||||||    
T  9428 tagactattttcatgtttcacaatccttgtctaaattcactttatcgaatatcaaaact 9370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 22004 - 21944
Alignment:
Q  7 tagattattctcatgtttcacaatccttgtttaatttcacttgttccaatatcaaaacttc 67  Q
    |||| |||| ||||||||  |||||||||| ||| |||||||||||||||||  |||||||    
T  22004 tagactattttcatgtttagcaatccttgtctaaattcacttgttccaatatttaaacttc 21944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University