View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18433_low_28 (Length: 275)
Name: NF18433_low_28
Description: NF18433
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18433_low_28 |
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Alignment Details
Target: chr7 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 41735893 - 41736160
Alignment:
| Q |
1 |
ttcgcccaaaccactacacttacgtcgccgttttaaccgcttgcacccgaatcctcaacctccaatttggtcttcagttacacgctgctgttatcaaaac |
100 |
Q |
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| T |
41735893 |
ttcgcccaaaccactacacttacgtcgccgttttaaccgcttgcacccgaatcctcaacctccaatttggtcttcagttacacgctgctgttatcaaaac |
41735992 |
T |
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| Q |
101 |
tggatatttgaaatccgtttttgtatccaatgcgcttatgtcattttattctaaatgtgggttttataaaaatgctttcaaagtgtttgatgaaatgcct |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41735993 |
tggatatttgaaatccgtttttgtatccaatgcgcttatgttattttattctaaatgtgggttttataaaaatgctttcaaagtgtttgatgaaatgcct |
41736092 |
T |
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| Q |
201 |
gaaagagatattgcgtcgtggaacactgtaatgtcttgtgcagttcaggagtttatgtatgatgatgt |
268 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41736093 |
gaaagagatattgcgtcgtggaacactgtaatgtcttgtgcagttcaggagtttatgtatgatgatgt |
41736160 |
T |
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