View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18434_low_4 (Length: 341)
Name: NF18434_low_4
Description: NF18434
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18434_low_4 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 1 - 341
Target Start/End: Original strand, 32226034 - 32226373
Alignment:
| Q |
1 |
ctgcctctttaccaccgttactctttgatgctcttatgttggatataaatataatatggtgttactgttgatgtttttagttacactaaaattgtagaat |
100 |
Q |
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| T |
32226034 |
ctgcctctttaccaccgttactctttgatgctcttatgttggatataaatataatatggtgttcctgttgatgtttttagttacactaaaattgtagaat |
32226133 |
T |
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| Q |
101 |
gtataacatattttatactactaatttgtcccaactttttgcagcatttactataatgcttttgttcaatgnnnnnnnnnnacattaaattagttaatac |
200 |
Q |
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| T |
32226134 |
gtttaacatattttatactactaatttgtcccaactttttgcagcatttactataatgcttttgttcaatg-ttgttttttacattaaattagttaatac |
32226232 |
T |
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| Q |
201 |
cataaatggccttgacaaatttcattctgtttttaggaaatcgatcataggaggttgagattccttttccaaaaggagttgaagaacagtgatgttagct |
300 |
Q |
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||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32226233 |
cataaatggccttgaaaattttcattctgtttttaggaaatcgatcataggaggttgagattccttttccaaaaggagttgaagaacagtgatgttagct |
32226332 |
T |
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| Q |
301 |
cccttaggagaatggtgttgcctaaggtttggcctttgctt |
341 |
Q |
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| T |
32226333 |
cccttaggagaatggtgttgcctaaggtttggcctttgctt |
32226373 |
T |
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