View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18434_low_9 (Length: 205)
Name: NF18434_low_9
Description: NF18434
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18434_low_9 |
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Alignment Details
Target: chr2 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 15 - 187
Target Start/End: Complemental strand, 35603439 - 35603267
Alignment:
| Q |
15 |
aatatccaagtctcccttccatggtggggcatattaagaagaccacttttgcttacctaaaacgtagaatttgtaaataagtgtcaattttgaagtgttg |
114 |
Q |
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| T |
35603439 |
aatatccaagtctcccttccatggtggggcatattaagaagaccactttcgcttacctaaaacgtagaatttgtaaataagtgtcaattttgaagtgttg |
35603340 |
T |
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| Q |
115 |
gattctttctcgcgttggaaagaaaatcttaattaaatctgttactcaggaatcatgccgtatatgtatggat |
187 |
Q |
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| T |
35603339 |
gattctttctcgcgttggaaagaaaatcttaattaaatctgttactcaggaatcatgccgtatatgtatggat |
35603267 |
T |
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