View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18436_low_11 (Length: 248)
Name: NF18436_low_11
Description: NF18436
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18436_low_11 |
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Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 50386695 - 50386457
Alignment:
| Q |
1 |
catattttgtcctttgcatgatttaatgtcgtatgaagaaacctaagtggttgaaataattttgttttaacttgaaggttattgtcacaagcttcacaag |
100 |
Q |
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| T |
50386695 |
catattttgtcctttgcatgatttaatgtcgcatgaagaaacctaagtggttgaaataattttgttttaacttgaaggttattgtcacaagcttcacaag |
50386596 |
T |
|
| Q |
101 |
tattccataaactgaaaatgatccatgatgagcttgttgtacttttatgggtaataatgtcttcaatgttgagtttgaagccttcatctttgtaataact |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50386595 |
tattccataaactgaaaatgatccatgatgagcttgttgtacttttatgggtaataatgtcttcaatgttgagtttgaagccttcatctttgtaataact |
50386496 |
T |
|
| Q |
201 |
aacccaagttcctaggctgagtttttctttgagaataat |
239 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
50386495 |
aacccaagttcctaggctgagtttttctttgagaataat |
50386457 |
T |
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