View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18439_low_3 (Length: 576)

Name: NF18439_low_3
Description: NF18439
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18439_low_3
NF18439_low_3
[»] chr8 (24 HSPs)
chr8 (71-358)||(32666648-32666935)
chr8 (468-560)||(1366470-1366562)
chr8 (468-560)||(62097-62189)
chr8 (1-61)||(32666961-32667022)
chr8 (409-456)||(39254789-39254836)
chr8 (468-513)||(44752474-44752519)
chr8 (409-456)||(61456-61503)
chr8 (409-456)||(1365831-1365878)
chr8 (470-513)||(39254890-39254933)
chr8 (412-456)||(62239-62283)
chr8 (409-449)||(44752576-44752616)
chr8 (419-456)||(1366612-1366649)
chr8 (468-513)||(12351162-12351207)
chr8 (468-507)||(216492-216531)
chr8 (468-507)||(693052-693091)
chr8 (468-507)||(697261-697300)
chr8 (468-507)||(730115-730154)
chr8 (468-507)||(854010-854049)
chr8 (412-455)||(5035276-5035319)
chr8 (409-456)||(39255751-39255798)
chr8 (412-447)||(41859315-41859350)
chr8 (409-456)||(44751610-44751657)
chr8 (414-447)||(37639718-37639751)
chr8 (412-444)||(44098432-44098464)
[»] chr5 (14 HSPs)
chr5 (468-560)||(13655032-13655124)
chr5 (263-355)||(31110494-31110586)
chr5 (412-456)||(13654938-13654982)
chr5 (363-407)||(41137972-41138016)
chr5 (412-455)||(33001937-33001980)
chr5 (411-443)||(39167452-39167484)
chr5 (412-447)||(8204125-8204160)
chr5 (412-447)||(15184025-15184060)
chr5 (412-447)||(33002824-33002859)
chr5 (316-363)||(39148768-39148815)
chr5 (412-447)||(39950409-39950444)
chr5 (409-443)||(13655672-13655706)
chr5 (255-308)||(2458294-2458347)
chr5 (161-202)||(31111244-31111285)
[»] chr4 (24 HSPs)
chr4 (469-560)||(28684089-28684180)
chr4 (468-560)||(47199252-47199344)
chr4 (263-355)||(55011696-55011788)
chr4 (95-240)||(198795-198936)
chr4 (409-456)||(47199394-47199441)
chr4 (255-349)||(37275102-37275196)
chr4 (412-456)||(47198610-47198654)
chr4 (412-447)||(3848586-3848621)
chr4 (412-455)||(10424128-10424171)
chr4 (412-447)||(25371553-25371588)
chr4 (468-507)||(55159279-55159318)
chr4 (409-447)||(3847888-3847926)
chr4 (1-58)||(198631-198688)
chr4 (414-447)||(37275095-37275128)
chr4 (412-456)||(42544493-42544537)
chr4 (412-447)||(11417692-11417727)
chr4 (412-447)||(11417945-11417980)
chr4 (412-455)||(28684232-28684275)
chr4 (412-447)||(29651340-29651375)
chr4 (412-447)||(36865725-36865760)
chr4 (412-447)||(38694962-38694997)
chr4 (413-456)||(55159186-55159229)
chr4 (409-443)||(28683510-28683544)
chr4 (316-364)||(52869446-52869494)
[»] chr3 (13 HSPs)
chr3 (255-355)||(53144574-53144674)
chr3 (409-456)||(17227947-17227994)
chr3 (412-455)||(32490195-32490238)
chr3 (409-447)||(17226970-17227008)
chr3 (161-202)||(53145330-53145371)
chr3 (412-455)||(36750050-36750093)
chr3 (412-447)||(36750445-36750480)
chr3 (412-455)||(38923665-38923708)
chr3 (412-455)||(42145278-42145321)
chr3 (412-455)||(44687163-44687206)
chr3 (255-308)||(21811934-21811987)
chr3 (161-230)||(21812436-21812505)
chr3 (255-308)||(37105017-37105070)
[»] chr1 (17 HSPs)
chr1 (255-308)||(48470943-48470996)
chr1 (468-507)||(37874871-37874910)
chr1 (409-447)||(51987829-51987867)
chr1 (409-456)||(35616774-35616821)
chr1 (412-455)||(48972445-48972488)
chr1 (409-447)||(51988472-51988510)
chr1 (161-202)||(48471672-48471713)
chr1 (412-447)||(193855-193890)
chr1 (412-443)||(8560844-8560875)
chr1 (412-447)||(16270212-16270247)
chr1 (412-447)||(23440873-23440908)
chr1 (412-447)||(51974442-51974477)
chr1 (409-447)||(35615769-35615807)
chr1 (316-369)||(43368874-43368927)
chr1 (275-308)||(48471790-48471823)
chr1 (412-456)||(37874069-37874113)
chr1 (412-444)||(48971710-48971742)
[»] chr6 (10 HSPs)
chr6 (468-507)||(9574481-9574520)
chr6 (409-456)||(9574570-9574617)
chr6 (409-447)||(7531831-7531869)
chr6 (412-447)||(7193343-7193378)
chr6 (412-447)||(15083326-15083361)
chr6 (412-447)||(22582487-22582522)
chr6 (412-447)||(22587318-22587353)
chr6 (412-447)||(33480636-33480671)
chr6 (409-439)||(7532456-7532486)
chr6 (414-447)||(33018424-33018457)
[»] chr2 (9 HSPs)
chr2 (409-456)||(5276467-5276514)
chr2 (468-507)||(5277305-5277344)
chr2 (412-455)||(13134323-13134366)
chr2 (412-448)||(14574006-14574042)
chr2 (412-447)||(21471022-21471057)
chr2 (412-447)||(21471962-21471997)
chr2 (316-366)||(3595243-3595293)
chr2 (409-447)||(41042544-41042582)
chr2 (409-439)||(45139694-45139724)
[»] scaffold0311 (1 HSPs)
scaffold0311 (412-447)||(168-203)
[»] chr7 (9 HSPs)
chr7 (412-447)||(668184-668219)
chr7 (412-447)||(7677422-7677457)
chr7 (412-447)||(7677817-7677852)
chr7 (412-447)||(17145627-17145662)
chr7 (412-447)||(37468915-37468950)
chr7 (412-447)||(37469013-37469048)
chr7 (412-447)||(38778859-38778894)
chr7 (412-447)||(38779571-38779606)
chr7 (412-447)||(41194518-41194553)


Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-112; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 71 - 358
Target Start/End: Complemental strand, 32666935 - 32666648
Alignment:
Q  71 agatgagacaacaaacacataattgaaggaagaagaacaagaaatgagggcaagaaaaagtgcagcagtgctgttaagtgacaggtatataagatttagg 170  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  32666935 agatgagacaacaaacacataattgaaggaagaagaacaagaaatgtgggcaagaaaaagtgcagcggtgctgttaagtgacaggcatataagatttagg 32666836  T
Q  171 ctgaaatcatttgtttaggggtggctcttggaggaggtggcgatggtgggtctattggtgaggttgaagacaatgagnnnnnnntatagtgcagacagtc 270  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||       |||| |||||||||||    
T  32666835 ctgaaatcatttgtttaggggtggctcttggaggaggtggtggtggtgggtctattggtgaggttgaagacaatgagaaaaaaatataatgcagacagtc 32666736  T
Q  271 tatggtaagattaatgttcccttttaatccagtggtttnnnnnnnctttctcatggtggaaaagaattcccctttcccatgtgaacac 358  Q
    ||||||||||||||||||||||||||||| ||||||||       ||||||||||||||||||  ||||||||||||||| |||||||    
T  32666735 tatggtaagattaatgttcccttttaatctagtggtttaaaaaaactttctcatggtggaaaacgattcccctttcccatatgaacac 32666648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 468 - 560
Target Start/End: Complemental strand, 1366562 - 1366470
Alignment:
Q  468 tccacactatattttcttcacatcatctctaaccttaacatcaacatggaaatccagaaggacatggaacatcatagcaaaacatcaacaatc 560  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  1366562 tccacactatattttcttcacatcatctctaaccttaacatcaacatggaaatccagaaggacatggaacatcacaacaaaacatcaacaatc 1366470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 468 - 560
Target Start/End: Complemental strand, 62189 - 62097
Alignment:
Q  468 tccacactatattttcttcacatcatctctaaccttaacatcaacatggaaatccagaaggacatggaacatcatagcaaaacatcaacaatc 560  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||    
T  62189 tccacactatattttcttcacatcatctctaaccttaacatcaacatggaaatccagaaggacatgaaacatcacaacaaaacatcaacaatc 62097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32667022 - 32666961
Alignment:
Q  1 tttgttttccttcagcaaatttaaggttgccgaaaacatcc-tctgaaggggataattggtg 61  Q
    ||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||    
T  32667022 tttgttttccttcagcagatttaaggttgccgaaaacagccttctgaaggggataattggtg 32666961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 409 - 456
Target Start/End: Original strand, 39254789 - 39254836
Alignment:
Q  409 tggcatttaatttgggaaaggagacttctttcccaccatagaaaagtc 456  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39254789 tggcatttaatttgggaaaggagacttctttcccaccataggaaagtc 39254836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 468 - 513
Target Start/End: Complemental strand, 44752519 - 44752474
Alignment:
Q  468 tccacactatattttcttcacatcatctctaaccttaacatcaaca 513  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  44752519 tccacactatattttcttcacatcatctctaaccttaacaacaaca 44752474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 409 - 456
Target Start/End: Original strand, 61456 - 61503
Alignment:
Q  409 tggcatttaatttgggaaaggagacttctttcccaccatagaaaagtc 456  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||    
T  61456 tggcatttaatttgggaaaggagacttctttcccaccatgggaaagtc 61503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 409 - 456
Target Start/End: Original strand, 1365831 - 1365878
Alignment:
Q  409 tggcatttaatttgggaaaggagacttctttcccaccatagaaaagtc 456  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||    
T  1365831 tggcatttaatttgggaaaggagacttctttcccaccatgggaaagtc 1365878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 470 - 513
Target Start/End: Original strand, 39254890 - 39254933
Alignment:
Q  470 cacactatattttcttcacatcatctctaaccttaacatcaaca 513  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  39254890 cacactatattttcttcacatcatctctaaccttaacaacaaca 39254933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 456
Target Start/End: Complemental strand, 62283 - 62239
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccatagaaaagtc 456  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||    
T  62283 catttaatttgagaaaggagacttctttcccaccataggaaagtc 62239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 449
Target Start/End: Complemental strand, 44752616 - 44752576
Alignment:
Q  409 tggcatttaatttgggaaaggagacttctttcccaccatag 449  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  44752616 tggcatttaacttgggaaaggagacttctttcccaccatag 44752576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 419 - 456
Target Start/End: Complemental strand, 1366649 - 1366612
Alignment:
Q  419 tttgggaaaggagacttctttcccaccatagaaaagtc 456  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  1366649 tttgggaaaggagacttcttttccaccatagaaaagtc 1366612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 468 - 513
Target Start/End: Original strand, 12351162 - 12351207
Alignment:
Q  468 tccacactatattttcttcacatcatctctaaccttaacatcaaca 513  Q
    |||||||||||||||||||||||||| ||||| ||||||| |||||    
T  12351162 tccacactatattttcttcacatcatttctaaacttaacaacaaca 12351207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 507
Target Start/End: Original strand, 216492 - 216531
Alignment:
Q  468 tccacactatattttcttcacatcatctctaaccttaaca 507  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  216492 tccacactttatttttttcacatcatctctaaccttaaca 216531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 507
Target Start/End: Original strand, 693052 - 693091
Alignment:
Q  468 tccacactatattttcttcacatcatctctaaccttaaca 507  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  693052 tccacactttatttttttcacatcatctctaaccttaaca 693091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 507
Target Start/End: Original strand, 697261 - 697300
Alignment:
Q  468 tccacactatattttcttcacatcatctctaaccttaaca 507  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  697261 tccacactttatttttttcacatcatctctaaccttaaca 697300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 507
Target Start/End: Original strand, 730115 - 730154
Alignment:
Q  468 tccacactatattttcttcacatcatctctaaccttaaca 507  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  730115 tccacactttatttttttcacatcatctctaaccttaaca 730154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 507
Target Start/End: Original strand, 854010 - 854049
Alignment:
Q  468 tccacactatattttcttcacatcatctctaaccttaaca 507  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  854010 tccacactttatttttttcacatcatctctaaccttaaca 854049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 455
Target Start/End: Complemental strand, 5035319 - 5035276
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccatagaaaagt 455  Q
    ||||||||||||||||||||| |||||| ||||||||| |||||    
T  5035319 catttaatttgggaaaggagagttcttttccaccataggaaagt 5035276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 456
Target Start/End: Complemental strand, 39255798 - 39255751
Alignment:
Q  409 tggcatttaatttgggaaaggagacttctttcccaccatagaaaagtc 456  Q
    |||||||||| |||||||| ||||||||||||||||||| | ||||||    
T  39255798 tggcatttaacttgggaaatgagacttctttcccaccatgggaaagtc 39255751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 41859315 - 41859350
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  41859315 catttaatttgggaaaggagagttctttcccaccat 41859350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 456
Target Start/End: Original strand, 44751610 - 44751657
Alignment:
Q  409 tggcatttaatttgggaaaggagacttctttcccaccatagaaaagtc 456  Q
    |||||||||| |||||||||||||||||||||||| ||| | ||||||    
T  44751610 tggcatttaacttgggaaaggagacttctttcccatcatgggaaagtc 44751657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 447
Target Start/End: Original strand, 37639718 - 37639751
Alignment:
Q  414 tttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||| ||||||||||||||    
T  37639718 tttaatttgggaaaggagagttctttcccaccat 37639751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 444
Target Start/End: Complemental strand, 44098464 - 44098432
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccac 444  Q
    ||||||||||||||||||||| |||||||||||    
T  44098464 catttaatttgggaaaggagagttctttcccac 44098432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 3e-40; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 468 - 560
Target Start/End: Original strand, 13655032 - 13655124
Alignment:
Q  468 tccacactatattttcttcacatcatctctaaccttaacatcaacatggaaatccagaaggacatggaacatcatagcaaaacatcaacaatc 560  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  13655032 tccacactatattttcttcacatcatctctaaccttaacatcaacatggaaatccagaaggacatggaacatcacaacaaaacatcaacaatc 13655124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 263 - 355
Target Start/End: Complemental strand, 31110586 - 31110494
Alignment:
Q  263 agacagtctatggtaagattaatgttcccttttaatccagtggtttnnnnnnnctttctcatggtggaaaagaattcccctttcccatgtgaa 355  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||       ||||||||| ||  ||||  |||||||||| |||||||||    
T  31110586 agacagtctatggtaagattaatgttcccttttaatctagtggtttaaaaaaactttctcatagtaaaaaatgattccccttttccatgtgaa 31110494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 412 - 456
Target Start/End: Original strand, 13654938 - 13654982
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccatagaaaagtc 456  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  13654938 catttaatttgggaaaggagacttctttcccaccataggaaagtc 13654982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 407
Target Start/End: Complemental strand, 41138016 - 41137972
Alignment:
Q  363 cacaaaaataagtgtaaatgatgaaaaagataccattgacttcca 407  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||    
T  41138016 cacaaaaataagtgtaaatgatggaaaagataccattgaattcca 41137972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 455
Target Start/End: Original strand, 33001937 - 33001980
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccatagaaaagt 455  Q
    ||||||||||||||||||||| |||||||||||||| |||||||    
T  33001937 catttaatttgggaaaggagagttctttcccaccatggaaaagt 33001980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 39167484 - 39167452
Alignment:
Q  411 gcatttaatttgggaaaggagacttctttccca 443  Q
    |||||||||||||||||||||||||||||||||    
T  39167484 gcatttaatttgggaaaggagacttctttccca 39167452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 8204125 - 8204160
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  8204125 catttaatttgggaaaggagagttctttcccaccat 8204160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Complemental strand, 15184060 - 15184025
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  15184060 catttaatttgggaaaggagagttctttcccaccat 15184025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Complemental strand, 33002859 - 33002824
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  33002859 catttaatttgggaaaggagagttctttcccaccat 33002824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 363
Target Start/End: Complemental strand, 39148815 - 39148768
Alignment:
Q  316 ctttctcatggtggaaaagaattcccctttcccatgtgaacacgcacc 363  Q
    ||||| |||||||||||||||||| |||||||||| ||||||| ||||    
T  39148815 ctttcccatggtggaaaagaattcacctttcccatatgaacacacacc 39148768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 39950409 - 39950444
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  39950409 catttaatttgggaaaggagagttctttcccaccat 39950444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 443
Target Start/End: Complemental strand, 13655706 - 13655672
Alignment:
Q  409 tggcatttaatttgggaaaggagacttctttccca 443  Q
    ||||||||||||||||||| |||||||||||||||    
T  13655706 tggcatttaatttgggaaaagagacttctttccca 13655672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 308
Target Start/End: Original strand, 2458294 - 2458347
Alignment:
Q  255 tatagtgcagacagtctatggtaagattaatgttcccttttaatccagtggttt 308  Q
    |||||||  |||||||||| ||||||| ||||||||||||||||| | ||||||    
T  2458294 tatagtgtggacagtctatagtaagatcaatgttcccttttaatctaatggttt 2458347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 31111244 - 31111285
Alignment:
Q  161 aagatttaggctgaaatcatttgtttaggggtggctcttgga 202  Q
    ||||||||||||||||||| | |||||||||||| |||||||    
T  31111244 aagatttaggctgaaatcaatggtttaggggtggttcttgga 31111285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 3e-37; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 469 - 560
Target Start/End: Complemental strand, 28684180 - 28684089
Alignment:
Q  469 ccacactatattttcttcacatcatctctaaccttaacatcaacatggaaatccagaaggacatggaacatcatagcaaaacatcaacaatc 560  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||    
T  28684180 ccacactatattttcttcacatcatctctaaccttaacatcaacatggaaatcaagaaggacatggaacatcacaacaaaacatcaacaatc 28684089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 468 - 560
Target Start/End: Complemental strand, 47199344 - 47199252
Alignment:
Q  468 tccacactatattttcttcacatcatctctaaccttaacatcaacatggaaatccagaaggacatggaacatcatagcaaaacatcaacaatc 560  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||    
T  47199344 tccacacaatattttctttacatcatctctaaccttaacatcaacatggaaattcagaaggacatggaacatcacaacaaaacatcaacaatc 47199252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 263 - 355
Target Start/End: Original strand, 55011696 - 55011788
Alignment:
Q  263 agacagtctatggtaagattaatgttcccttttaatccagtggtttnnnnnnnctttctcatggtggaaaagaattcccctttcccatgtgaa 355  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||       ||||||||| |||| |||||||||| ||||||||||||||    
T  55011696 agacagtctatagtaagattaatgttcccttttaatctagtggtttaaaaaaactttctcatagtgggaaagaattcctctttcccatgtgaa 55011788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 95 - 240
Target Start/End: Original strand, 198795 - 198936
Alignment:
Q  95 gaaggaagaagaacaagaaatgagggcaagaaaaagtgcagcagtgctgttaagtgacaggtatataagatttaggctgaaatcatttgttta-ggggtg 193  Q
    |||| ||||||||| | ||||||||| ||||||| ||||||| ||||||||||||||   | ||||||||| |||||| |||||| | ||||| ||||||    
T  198795 gaagaaagaagaacgataaatgagggtaagaaaatgtgcagcggtgctgttaagtgatgagcatataagatataggctcaaatcaatggtttagggggtg 198894  T
Q  194 gctcttggaggaggtggcgatggtgggtctattggtgaggttgaaga 240  Q
    ||||  |||||||||||   |||||| || |||||||||||||||||    
T  198895 gctc--ggaggaggtgg---tggtggttccattggtgaggttgaaga 198936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 409 - 456
Target Start/End: Complemental strand, 47199441 - 47199394
Alignment:
Q  409 tggcatttaatttgggaaaggagacttctttcccaccatagaaaagtc 456  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  47199441 tggcatttaatttgggaaaagagacttctttcccaccataggaaagtc 47199394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 255 - 349
Target Start/End: Complemental strand, 37275196 - 37275102
Alignment:
Q  255 tatagtgcagacagtctatggtaagattaatgttcccttttaatccagtggtttnnnnnnnctttctcatggtggaaaagaattcccctttccca 349  Q
    |||||||  |||||||||| ||||||| ||||||||||||||||| | ||||||       |||||||||||||| |||||| || |||||||||    
T  37275196 tatagtgtggacagtctatagtaagatcaatgttcccttttaatctaatggtttaaaaaaactttctcatggtgggaaagaagtctcctttccca 37275102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 456
Target Start/End: Original strand, 47198610 - 47198654
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccatagaaaagtc 456  Q
    |||||||||||||||||||||||||||||||||||| | ||||||    
T  47198610 catttaatttgggaaaggagacttctttcccaccatgggaaagtc 47198654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 447
Target Start/End: Complemental strand, 3848621 - 3848586
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||||||||||||||||||    
T  3848621 catttaatttgggaaaggagacttctttcccaccat 3848586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 455
Target Start/End: Original strand, 10424128 - 10424171
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccatagaaaagt 455  Q
    ||||||||||||||||||||| |||||||||||||||| |||||    
T  10424128 catttaatttgggaaaggagagttctttcccaccataggaaagt 10424171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 447
Target Start/End: Complemental strand, 25371588 - 25371553
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||||||||||||||||||    
T  25371588 catttaatttgggaaaggagacttctttcccaccat 25371553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 468 - 507
Target Start/End: Original strand, 55159279 - 55159318
Alignment:
Q  468 tccacactatattttcttcacatcatctctaaccttaaca 507  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  55159279 tccacactataatttcttcacatcatctctaaccttaaca 55159318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 447
Target Start/End: Original strand, 3847888 - 3847926
Alignment:
Q  409 tggcatttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  3847888 tggcatttaatttgggaaaggagacttttttcccaccat 3847926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 198631 - 198688
Alignment:
Q  1 tttgttttccttcagcaaatttaaggttgccgaaaacatcctctgaaggggataattg 58  Q
    |||||||||||||||||| || |||||||||| ||| | ||||| |||||||||||||    
T  198631 tttgttttccttcagcaatttaaaggttgccggaaatagcctctaaaggggataattg 198688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 414 - 447
Target Start/End: Original strand, 37275095 - 37275128
Alignment:
Q  414 tttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||||||||||||||||    
T  37275095 tttaatttgggaaaggagacttctttcccaccat 37275128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 456
Target Start/End: Original strand, 42544493 - 42544537
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccatagaaaagtc 456  Q
    ||||||||||||||||| |||||| ||||||||||| ||||||||    
T  42544493 catttaatttgggaaagaagacttttttcccaccatggaaaagtc 42544537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 11417692 - 11417727
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  11417692 catttaatttgggaaaggagagttctttcccaccat 11417727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Complemental strand, 11417980 - 11417945
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  11417980 catttaatttgggaaaggagagttctttcccaccat 11417945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 455
Target Start/End: Complemental strand, 28684275 - 28684232
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccatagaaaagt 455  Q
    |||||||||||||||||||||||| ||||| ||||||| |||||    
T  28684275 catttaatttgggaaaggagacttttttcctaccataggaaagt 28684232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Complemental strand, 29651375 - 29651340
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  29651375 catttaatttgggaaaggagagttctttcccaccat 29651340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Complemental strand, 36865760 - 36865725
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  36865760 catttaatttgggaaaggagagttctttcccaccat 36865725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Complemental strand, 38694997 - 38694962
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  38694997 catttaatttgggaaaggagagttctttcccaccat 38694962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 55159186 - 55159229
Alignment:
Q  413 atttaatttgggaaaggagacttctttcccaccatagaaaagtc 456  Q
    ||||||||||||||||||||||||||||| ||||| | ||||||    
T  55159186 atttaatttgggaaaggagacttctttcctaccatgggaaagtc 55159229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 443
Target Start/End: Original strand, 28683510 - 28683544
Alignment:
Q  409 tggcatttaatttgggaaaggagacttctttccca 443  Q
    |||||||||||||||| ||||||||||||||||||    
T  28683510 tggcatttaatttggggaaggagacttctttccca 28683544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 364
Target Start/End: Complemental strand, 52869494 - 52869446
Alignment:
Q  316 ctttctcatggtggaaaagaattcccctttcccatgtgaacacgcacca 364  Q
    ||||| |||||||| |||| |||| |||||||||||||||||| |||||    
T  52869494 ctttcccatggtgggaaaggattcacctttcccatgtgaacacacacca 52869446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 6e-23; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 255 - 355
Target Start/End: Complemental strand, 53144674 - 53144574
Alignment:
Q  255 tatagtgcagacagtctatggtaagattaatgttcccttttaatccagtggtttnnnnnnnctttctcatggtggaaaagaattcccctttcccatgtga 354  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||       |||| | ||||||||||| ||||||| ||||||||||||    
T  53144674 tatagtgtagacagtctatggtaagattaatgttcccttttaatctagtggtttaaaaaaacttttttatggtggaaaaaaattcccatttcccatgtga 53144575  T
Q  355 a 355  Q
    |    
T  53144574 a 53144574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 409 - 456
Target Start/End: Complemental strand, 17227994 - 17227947
Alignment:
Q  409 tggcatttaatttgggaaaggagacttctttcccaccatagaaaagtc 456  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||    
T  17227994 tggcatttaatttgggaaaggagacttctttcccaccatgaaaaagtc 17227947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 455
Target Start/End: Complemental strand, 32490238 - 32490195
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccatagaaaagt 455  Q
    ||||||||||||||||||||| |||||||||||||| |||||||    
T  32490238 catttaatttgggaaaggagagttctttcccaccatggaaaagt 32490195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 447
Target Start/End: Original strand, 17226970 - 17227008
Alignment:
Q  409 tggcatttaatttgggaaaggagacttctttcccaccat 447  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  17226970 tggcatttaatttgggaaaggagatttctttcccaccat 17227008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 53145330 - 53145371
Alignment:
Q  161 aagatttaggctgaaatcatttgtttaggggtggctcttgga 202  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  53145330 aagatttaggctgaaatcaatggtttaggggtggctcttgga 53145371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 455
Target Start/End: Original strand, 36750050 - 36750093
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccatagaaaagt 455  Q
    ||||||||||||||||||||| |||||| ||||||| |||||||    
T  36750050 catttaatttgggaaaggagagttcttttccaccatggaaaagt 36750093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Complemental strand, 36750480 - 36750445
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  36750480 catttaatttgggaaaggagagttctttcccaccat 36750445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 455
Target Start/End: Complemental strand, 38923708 - 38923665
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccatagaaaagt 455  Q
    |||||||||||||||| |||| |||||||||||||| |||||||    
T  38923708 catttaatttgggaaatgagagttctttcccaccatggaaaagt 38923665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 455
Target Start/End: Complemental strand, 42145321 - 42145278
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccatagaaaagt 455  Q
    |||||||||||||||||||||||| ||| ||||||||| |||||    
T  42145321 catttaatttgggaaaggagactttttttccaccataggaaagt 42145278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 455
Target Start/End: Complemental strand, 44687206 - 44687163
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccatagaaaagt 455  Q
    ||||||||||||||||||||| |||||| ||||||| |||||||    
T  44687206 catttaatttgggaaaggagaattcttttccaccatggaaaagt 44687163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 21811987 - 21811934
Alignment:
Q  255 tatagtgcagacagtctatggtaagattaatgttcccttttaatccagtggttt 308  Q
    |||||||  |||||||||| ||||||| ||||||||||||||||| | ||||||    
T  21811987 tatagtgtggacagtctatagtaagatcaatgttcccttttaatctaatggttt 21811934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 21812436 - 21812505
Alignment:
Q  161 aagatttaggctgaaatcatttgtttaggggtggctcttggaggaggtggcgatggtgggtctattggtg 230  Q
    ||||||||||||||||||| |||||||  ||||| ||||||||  |||   | |||||||||||||||||    
T  21812436 aagatttaggctgaaatcaattgtttaatggtggttcttggagtcggttttggtggtgggtctattggtg 21812505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 308
Target Start/End: Original strand, 37105017 - 37105070
Alignment:
Q  255 tatagtgcagacagtctatggtaagattaatgttcccttttaatccagtggttt 308  Q
    |||||||  |||||||||| ||||||| ||||||||||||||||| | ||||||    
T  37105017 tatagtgtggacagtctatagtaagatcaatgttcccttttaatctaatggttt 37105070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 48470996 - 48470943
Alignment:
Q  255 tatagtgcagacagtctatggtaagattaatgttcccttttaatccagtggttt 308  Q
    ||||||| |||||||||||||||||||||||||||| |||||||| ||||||||    
T  48470996 tatagtgtagacagtctatggtaagattaatgttccattttaatctagtggttt 48470943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 468 - 507
Target Start/End: Complemental strand, 37874910 - 37874871
Alignment:
Q  468 tccacactatattttcttcacatcatctctaaccttaaca 507  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37874910 tccacactatattttcttcacatcatctctaaccttaaca 37874871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 409 - 447
Target Start/End: Original strand, 51987829 - 51987867
Alignment:
Q  409 tggcatttaatttgggaaaggagacttctttcccaccat 447  Q
    |||||||||||||||||||||||||||||||||||||||    
T  51987829 tggcatttaatttgggaaaggagacttctttcccaccat 51987867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 409 - 456
Target Start/End: Complemental strand, 35616821 - 35616774
Alignment:
Q  409 tggcatttaatttgggaaaggagacttctttcccaccatagaaaagtc 456  Q
    |||||||||| |||||||||||||||||||||||||||| | ||||||    
T  35616821 tggcatttaacttgggaaaggagacttctttcccaccatgggaaagtc 35616774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 455
Target Start/End: Complemental strand, 48972488 - 48972445
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccatagaaaagt 455  Q
    ||||||||||||||||||||| |||||||||||||| |||||||    
T  48972488 catttaatttgggaaaggagagttctttcccaccatggaaaagt 48972445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 447
Target Start/End: Complemental strand, 51988510 - 51988472
Alignment:
Q  409 tggcatttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  51988510 tggcatttaatttgggaaaggagacttcttttccaccat 51988472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 48471672 - 48471713
Alignment:
Q  161 aagatttaggctgaaatcatttgtttaggggtggctcttgga 202  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  48471672 aagatttaggctgaaatcaatggtttaggggtggctcttgga 48471713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 193855 - 193890
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  193855 catttaatttgggaaaggagagttctttcccaccat 193890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 443
Target Start/End: Original strand, 8560844 - 8560875
Alignment:
Q  412 catttaatttgggaaaggagacttctttccca 443  Q
    ||||||||||||||||||||||||||||||||    
T  8560844 catttaatttgggaaaggagacttctttccca 8560875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 16270212 - 16270247
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  16270212 catttaatttgggaaaggagagttctttcccaccat 16270247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Complemental strand, 23440908 - 23440873
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  23440908 catttaatttgggaaaggagagttctttcccaccat 23440873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 51974442 - 51974477
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  51974442 catttaatttgggaaaggagagttctttcccaccat 51974477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 447
Target Start/End: Original strand, 35615769 - 35615807
Alignment:
Q  409 tggcatttaatttgggaaaggagacttctttcccaccat 447  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  35615769 tggcatttaacttggaaaaggagacttctttcccaccat 35615807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 369
Target Start/End: Original strand, 43368874 - 43368927
Alignment:
Q  316 ctttctcatggtggaaaagaattcccctttcccatgtgaacacgcaccacaaaa 369  Q
    ||||| |||||||| ||||||||  |||||||||||||||||| ||||| ||||    
T  43368874 ctttcccatggtgggaaagaattaacctttcccatgtgaacacacaccaaaaaa 43368927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 308
Target Start/End: Original strand, 48471790 - 48471823
Alignment:
Q  275 gtaagattaatgttcccttttaatccagtggttt 308  Q
    |||||||||||||||||||| |||||||||||||    
T  48471790 gtaagattaatgttccctttcaatccagtggttt 48471823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 456
Target Start/End: Original strand, 37874069 - 37874113
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccatagaaaagtc 456  Q
    ||||||| |||||||| ||||||||||||||||||| | ||||||    
T  37874069 catttaacttgggaaatgagacttctttcccaccatgggaaagtc 37874113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 444
Target Start/End: Original strand, 48971710 - 48971742
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccac 444  Q
    ||||||||||||||||||||| |||||||||||    
T  48971710 catttaatttgggaaaggagagttctttcccac 48971742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 468 - 507
Target Start/End: Complemental strand, 9574520 - 9574481
Alignment:
Q  468 tccacactatattttcttcacatcatctctaaccttaaca 507  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  9574520 tccacactatattttcttcacatcatctctaaccttaaca 9574481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 409 - 456
Target Start/End: Complemental strand, 9574617 - 9574570
Alignment:
Q  409 tggcatttaatttgggaaaggagacttctttcccaccatagaaaagtc 456  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||    
T  9574617 tggcatttaacttgggaaaggagacttctttcccaccataggaaagtc 9574570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 447
Target Start/End: Original strand, 7531831 - 7531869
Alignment:
Q  409 tggcatttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  7531831 tggcatttaatttgggaaaggagacttctttcctaccat 7531869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 7193343 - 7193378
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  7193343 catttaatttgggaaaggagagttctttcccaccat 7193378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Complemental strand, 15083361 - 15083326
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  15083361 catttaatttgggaaaggagagttctttcccaccat 15083326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Complemental strand, 22582522 - 22582487
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  22582522 catttaatttgggaaaggagagttctttcccaccat 22582487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Complemental strand, 22587353 - 22587318
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  22587353 catttaatttgggaaaggagagttctttcccaccat 22587318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Complemental strand, 33480671 - 33480636
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  33480671 catttaatttgggaaaggagagttctttcccaccat 33480636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 439
Target Start/End: Complemental strand, 7532486 - 7532456
Alignment:
Q  409 tggcatttaatttgggaaaggagacttcttt 439  Q
    |||||||||||||||||||||||||||||||    
T  7532486 tggcatttaatttgggaaaggagacttcttt 7532456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 447
Target Start/End: Complemental strand, 33018457 - 33018424
Alignment:
Q  414 tttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||| ||||||||||||||    
T  33018457 tttaatttgggaaaggagagttctttcccaccat 33018424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000005; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 409 - 456
Target Start/End: Original strand, 5276467 - 5276514
Alignment:
Q  409 tggcatttaatttgggaaaggagacttctttcccaccatagaaaagtc 456  Q
    |||||||||| |||||||||||||||||||||||||||| | ||||||    
T  5276467 tggcatttaacttgggaaaggagacttctttcccaccatgggaaagtc 5276514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 468 - 507
Target Start/End: Complemental strand, 5277344 - 5277305
Alignment:
Q  468 tccacactatattttcttcacatcatctctaaccttaaca 507  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  5277344 tccacactatattttcttcacatcatctccaaccttaaca 5277305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 455
Target Start/End: Original strand, 13134323 - 13134366
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccatagaaaagt 455  Q
    ||||||||||||||||||||| |||||||||||||||| |||||    
T  13134323 catttaatttgggaaaggagagttctttcccaccataggaaagt 13134366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 14574042 - 14574006
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccata 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  14574042 catttaatttgggaaaggagagttctttcccaccata 14574006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 21471022 - 21471057
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  21471022 catttaatttgggaaaggagagttctttcccaccat 21471057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Complemental strand, 21471997 - 21471962
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  21471997 catttaatttgggaaaggagagttctttcccaccat 21471962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 316 - 366
Target Start/End: Complemental strand, 3595293 - 3595243
Alignment:
Q  316 ctttctcatggtggaaaagaattcccctttcccatgtgaacacgcaccaca 366  Q
    ||||| |||||||| ||||||||  |||||||||||||||||| |||||||    
T  3595293 ctttcccatggtgggaaagaattaacctttcccatgtgaacacacaccaca 3595243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 447
Target Start/End: Original strand, 41042544 - 41042582
Alignment:
Q  409 tggcatttaatttgggaaaggagacttctttcccaccat 447  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  41042544 tggcatttaatttgagaaaggaggcttctttcccaccat 41042582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 439
Target Start/End: Original strand, 45139694 - 45139724
Alignment:
Q  409 tggcatttaatttgggaaaggagacttcttt 439  Q
    |||||||||||||||||||||||||||||||    
T  45139694 tggcatttaatttgggaaaggagacttcttt 45139724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Complemental strand, 203 - 168
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  203 catttaatttgggaaaggagagttctttcccaccat 168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 32; Significance: 0.00000001; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 668184 - 668219
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  668184 catttaatttgggaaaggagagttctttcccaccat 668219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 7677422 - 7677457
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  7677422 catttaatttgggaaaggagaattctttcccaccat 7677457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Complemental strand, 7677852 - 7677817
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  7677852 catttaatttgggaaaggagagttctttcccaccat 7677817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 17145627 - 17145662
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  17145627 catttaatttgggaaaggagagttctttcccaccat 17145662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 37468915 - 37468950
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  37468915 catttaatttgggaaaggagagttctttcccaccat 37468950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Complemental strand, 37469048 - 37469013
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  37469048 catttaatttgggaaaggagagttctttcccaccat 37469013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 38778859 - 38778894
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  38778859 catttaatttgggaaaggagagttctttcccaccat 38778894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Complemental strand, 38779606 - 38779571
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  38779606 catttaatttgggaaaggagagttctttcccaccat 38779571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 41194518 - 41194553
Alignment:
Q  412 catttaatttgggaaaggagacttctttcccaccat 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  41194518 catttaatttgggaaaggagagttctttcccaccat 41194553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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