View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1843_high_4 (Length: 286)
Name: NF1843_high_4
Description: NF1843
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1843_high_4 |
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Alignment Details
Target: chr8 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 18 - 278
Target Start/End: Complemental strand, 29607467 - 29607207
Alignment:
| Q |
18 |
aagattgtgcaccattctgtgaaacataaaatcataagattcgataaaagaagctttagcaagttttgccaagtcagagtacaatctgtctgataaagat |
117 |
Q |
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| T |
29607467 |
aagattgtgcaccattctgtgaaacataaaatcataagattcgataaaagaagctttagcaagttttgccaagtcagagtacaatctgtctgataaagat |
29607368 |
T |
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| Q |
118 |
cagatgacaaagattgcatgaattcgttaatgcggcataatccagaccaaagaggtccgtaaatatagaattgtaacttaaagtaaaatggaaaaggata |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
29607367 |
cagatgacaaagattgcatgaattcgttaatgcggcatgatccagaccaaagaggtccgtaaatatagaattgtaacttaaagtaaaatggaaaaagata |
29607268 |
T |
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| Q |
218 |
ttaccgcactgggactgggtgctggtgacggtccttcatctgaactcattgtagtattatc |
278 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29607267 |
ttaccgcactgggactgggtgctggtgacggtccttcatctgaactcattgtagtattatc |
29607207 |
T |
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