View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1843_low_11 (Length: 235)

Name: NF1843_low_11
Description: NF1843
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1843_low_11
NF1843_low_11
[»] chr7 (65 HSPs)
chr7 (109-235)||(4680875-4681001)
chr7 (109-235)||(11649987-11650113)
chr7 (109-235)||(23591392-23591519)
chr7 (103-235)||(12140839-12140972)
chr7 (108-235)||(16671604-16671732)
chr7 (108-235)||(17645972-17646100)
chr7 (109-235)||(22773890-22774015)
chr7 (109-235)||(9141938-9142066)
chr7 (109-235)||(48640778-48640906)
chr7 (109-235)||(2526931-2527059)
chr7 (111-235)||(11646188-11646312)
chr7 (109-235)||(11646375-11646502)
chr7 (109-235)||(18486634-18486761)
chr7 (109-235)||(16492523-16492649)
chr7 (105-235)||(22324280-22324411)
chr7 (109-231)||(27716513-27716636)
chr7 (109-235)||(45419614-45419741)
chr7 (109-234)||(34837187-34837315)
chr7 (109-235)||(19222105-19222233)
chr7 (109-235)||(48640994-48641121)
chr7 (132-235)||(4681122-4681227)
chr7 (109-215)||(27716308-27716414)
chr7 (109-235)||(21224138-21224265)
chr7 (109-235)||(23591609-23591736)
chr7 (110-235)||(45419820-45419947)
chr7 (109-215)||(11645930-11646036)
chr7 (138-235)||(18487180-18487278)
chr7 (102-235)||(40450079-40450213)
chr7 (109-231)||(2354646-2354770)
chr7 (109-225)||(46264272-46264389)
chr7 (104-235)||(35124720-35124852)
chr7 (109-226)||(30991459-30991578)
chr7 (101-192)||(32278158-32278249)
chr7 (109-235)||(34837442-34837568)
chr7 (109-235)||(48641418-48641546)
chr7 (109-235)||(16671246-16671374)
chr7 (109-235)||(17645614-17645742)
chr7 (112-235)||(2853195-2853320)
chr7 (109-235)||(4681576-4681699)
chr7 (103-199)||(9142148-9142244)
chr7 (109-187)||(11646627-11646705)
chr7 (109-215)||(21128040-21128146)
chr7 (141-225)||(43059223-43059308)
chr7 (109-235)||(4454924-4455051)
chr7 (130-235)||(1566485-1566593)
chr7 (132-235)||(16362668-16362772)
chr7 (138-214)||(40686892-40686967)
chr7 (109-176)||(23591237-23591304)
chr7 (109-162)||(34837388-34837441)
chr7 (186-231)||(9395804-9395850)
chr7 (109-155)||(34837655-34837701)
chr7 (109-166)||(6249840-6249897)
chr7 (109-158)||(46264086-46264135)
chr7 (66-106)||(5194286-5194326)
chr7 (66-106)||(5810979-5811019)
chr7 (188-235)||(6249896-6249944)
chr7 (66-106)||(24001067-24001107)
chr7 (66-106)||(26898457-26898497)
chr7 (66-106)||(27535286-27535326)
chr7 (66-106)||(31408688-31408728)
chr7 (66-106)||(40236924-40236964)
chr7 (66-106)||(41861679-41861719)
chr7 (66-106)||(42538486-42538526)
chr7 (66-106)||(43317448-43317488)
chr7 (66-106)||(44326183-44326223)
[»] chr6 (39 HSPs)
chr6 (105-235)||(9828915-9829046)
chr6 (109-235)||(25068188-25068316)
chr6 (109-231)||(17906784-17906906)
chr6 (109-235)||(4811040-4811168)
chr6 (109-235)||(17201597-17201724)
chr6 (109-235)||(17202850-17202977)
chr6 (109-235)||(25067962-25068089)
chr6 (109-235)||(23610432-23610559)
chr6 (109-235)||(27579598-27579725)
chr6 (109-235)||(4100293-4100424)
chr6 (104-235)||(808467-808598)
chr6 (105-235)||(27315283-27315413)
chr6 (109-235)||(808829-808958)
chr6 (109-235)||(17199986-17200112)
chr6 (109-231)||(23622218-23622341)
chr6 (109-235)||(32208386-32208513)
chr6 (140-235)||(17202661-17202758)
chr6 (109-235)||(26832495-26832622)
chr6 (109-215)||(15130899-15131005)
chr6 (109-235)||(29201558-29201673)
chr6 (130-235)||(23902528-23902634)
chr6 (109-235)||(17080035-17080163)
chr6 (109-235)||(808693-808811)
chr6 (130-185)||(17011130-17011185)
chr6 (111-173)||(1393582-1393644)
chr6 (109-155)||(4125709-4125755)
chr6 (111-197)||(8685155-8685236)
chr6 (111-197)||(8674476-8674557)
chr6 (152-213)||(32208573-32208634)
chr6 (110-158)||(17011026-17011074)
chr6 (66-106)||(27441547-27441587)
chr6 (109-156)||(19121169-19121216)
chr6 (109-155)||(17010917-17010963)
chr6 (105-155)||(33482438-33482488)
chr6 (66-106)||(9698388-9698428)
chr6 (109-153)||(25068140-25068184)
chr6 (66-106)||(26466804-26466844)
chr6 (66-106)||(26670064-26670104)
chr6 (66-106)||(31109277-31109317)
[»] chr4 (67 HSPs)
chr4 (109-235)||(48076190-48076317)
chr4 (109-235)||(23952484-23952610)
chr4 (112-235)||(48076371-48076495)
chr4 (105-235)||(4941674-4941805)
chr4 (109-235)||(36639172-36639299)
chr4 (109-235)||(23952759-23952886)
chr4 (109-235)||(54653628-54653755)
chr4 (109-235)||(47768952-47769080)
chr4 (102-235)||(2481630-2481761)
chr4 (105-235)||(2177260-2177391)
chr4 (109-235)||(53144824-53144951)
chr4 (109-231)||(22292898-22293020)
chr4 (109-235)||(7821303-7821430)
chr4 (109-235)||(24049565-24049692)
chr4 (109-235)||(28379741-28379867)
chr4 (109-235)||(43161719-43161846)
chr4 (105-235)||(52689597-52689728)
chr4 (109-235)||(21585536-21585662)
chr4 (109-226)||(48076545-48076664)
chr4 (109-235)||(7796785-7796912)
chr4 (112-211)||(44500675-44500774)
chr4 (109-235)||(7821519-7821646)
chr4 (109-235)||(12796099-12796226)
chr4 (109-235)||(29967179-29967307)
chr4 (120-235)||(8118608-8118724)
chr4 (109-232)||(36639345-36639469)
chr4 (109-235)||(8397721-8397848)
chr4 (109-235)||(47631360-47631487)
chr4 (109-235)||(8118383-8118509)
chr4 (104-215)||(28389771-28389882)
chr4 (109-234)||(7809348-7809474)
chr4 (140-235)||(21581254-21581351)
chr4 (119-235)||(22292701-22292818)
chr4 (109-215)||(32010682-32010789)
chr4 (109-235)||(28813225-28813352)
chr4 (109-235)||(28379959-28380077)
chr4 (151-235)||(8479123-8479206)
chr4 (134-235)||(43161901-43162006)
chr4 (117-235)||(47428394-47428513)
chr4 (109-235)||(47631539-47631666)
chr4 (138-231)||(7809561-7809655)
chr4 (104-231)||(8079013-8079141)
chr4 (141-215)||(8079327-8079401)
chr4 (112-180)||(15456295-15456363)
chr4 (112-180)||(15463679-15463747)
chr4 (109-167)||(24046065-24046123)
chr4 (163-235)||(24049337-24049410)
chr4 (114-212)||(8078897-8078997)
chr4 (172-235)||(41852122-41852188)
chr4 (109-158)||(2526941-2526990)
chr4 (103-235)||(7526423-7526556)
chr4 (109-154)||(23952613-23952658)
chr4 (109-154)||(23952661-23952706)
chr4 (109-155)||(8079456-8079502)
chr4 (66-106)||(711965-712005)
chr4 (66-106)||(1771321-1771361)
chr4 (66-106)||(3756301-3756341)
chr4 (66-106)||(28988478-28988518)
chr4 (109-165)||(18002111-18002170)
chr4 (109-158)||(47428298-47428347)
chr4 (66-106)||(960925-960965)
chr4 (66-106)||(17619207-17619247)
chr4 (66-106)||(32728362-32728402)
chr4 (66-106)||(41878411-41878451)
chr4 (66-106)||(43514741-43514781)
chr4 (66-106)||(46827761-46827801)
chr4 (66-106)||(55966401-55966441)
[»] chr3 (55 HSPs)
chr3 (109-235)||(46451470-46451597)
chr3 (109-235)||(47503032-47503159)
chr3 (105-235)||(53047567-53047697)
chr3 (111-232)||(43017273-43017396)
chr3 (109-235)||(837182-837309)
chr3 (109-235)||(18094956-18095083)
chr3 (109-231)||(36643110-36643233)
chr3 (109-235)||(38887343-38887471)
chr3 (106-235)||(35560098-35560229)
chr3 (109-224)||(11454562-11454679)
chr3 (104-235)||(11454200-11454332)
chr3 (109-235)||(18094741-18094868)
chr3 (113-235)||(37760501-37760624)
chr3 (109-231)||(40050850-40050972)
chr3 (109-235)||(20877195-20877322)
chr3 (109-235)||(38887557-38887686)
chr3 (109-235)||(47503205-47503333)
chr3 (109-215)||(45514419-45514524)
chr3 (109-235)||(11454381-11454511)
chr3 (109-215)||(16015250-16015356)
chr3 (138-235)||(47519955-47520053)
chr3 (111-235)||(43819330-43819455)
chr3 (113-198)||(47519871-47519956)
chr3 (146-235)||(46451320-46451411)
chr3 (109-204)||(38887806-38887901)
chr3 (109-224)||(11453937-11454054)
chr3 (110-235)||(21968987-21969111)
chr3 (110-235)||(21991423-21991547)
chr3 (138-215)||(24365763-24365840)
chr3 (109-235)||(11522532-11522661)
chr3 (112-235)||(11220780-11220903)
chr3 (109-215)||(46451078-46451181)
chr3 (109-213)||(850932-851036)
chr3 (139-203)||(51654074-51654138)
chr3 (145-235)||(52300747-52300838)
chr3 (109-235)||(3847825-3847944)
chr3 (183-231)||(851039-851088)
chr3 (109-231)||(25917426-25917546)
chr3 (109-156)||(46451252-46451299)
chr3 (164-201)||(54274787-54274824)
chr3 (66-106)||(4190320-4190360)
chr3 (105-213)||(17755732-17755840)
chr3 (105-213)||(19057052-19057160)
chr3 (66-106)||(25413686-25413726)
chr3 (66-106)||(54246203-54246243)
chr3 (183-231)||(54274725-54274774)
chr3 (66-106)||(9434129-9434169)
chr3 (66-106)||(10457947-10457987)
chr3 (66-106)||(36150135-36150175)
chr3 (66-106)||(40480754-40480794)
chr3 (66-106)||(42100693-42100733)
chr3 (66-106)||(45126983-45127023)
chr3 (66-106)||(47191080-47191120)
chr3 (66-106)||(53581913-53581953)
chr3 (66-106)||(54237101-54237141)
[»] chr1 (63 HSPs)
chr1 (109-235)||(318555-318682)
chr1 (109-235)||(1156044-1156171)
chr1 (109-235)||(44263089-44263216)
chr1 (109-235)||(51113906-51114033)
chr1 (109-235)||(5428528-5428654)
chr1 (109-235)||(27296162-27296288)
chr1 (109-235)||(42492143-42492271)
chr1 (105-230)||(44262660-44262785)
chr1 (109-226)||(51114090-51114208)
chr1 (109-235)||(38684015-38684142)
chr1 (109-235)||(16165664-16165792)
chr1 (109-235)||(51113723-51113851)
chr1 (105-235)||(21617752-21617883)
chr1 (109-235)||(27296337-27296464)
chr1 (109-235)||(42497268-42497397)
chr1 (109-235)||(3227201-3227328)
chr1 (109-235)||(52740700-52740828)
chr1 (109-213)||(42496935-42497039)
chr1 (109-235)||(1647543-1647670)
chr1 (109-235)||(44263310-44263437)
chr1 (110-235)||(4100566-4100691)
chr1 (109-221)||(5428933-5429046)
chr1 (104-235)||(5429043-5429179)
chr1 (113-235)||(6537630-6537757)
chr1 (111-235)||(28950149-28950274)
chr1 (109-235)||(18912327-18912455)
chr1 (109-197)||(28950277-28950365)
chr1 (109-235)||(42497448-42497574)
chr1 (109-215)||(51272492-51272598)
chr1 (111-231)||(28949875-28949995)
chr1 (117-235)||(4100771-4100890)
chr1 (138-235)||(44099651-44099747)
chr1 (108-215)||(18912214-18912322)
chr1 (109-235)||(30083978-30084106)
chr1 (109-200)||(33375630-33375721)
chr1 (117-235)||(24595066-24595187)
chr1 (109-215)||(42497111-42497217)
chr1 (109-186)||(28950016-28950093)
chr1 (141-235)||(52584966-52585061)
chr1 (160-235)||(45417579-45417655)
chr1 (163-235)||(12115359-12115432)
chr1 (136-202)||(24595255-24595321)
chr1 (109-235)||(43761946-43762074)
chr1 (109-180)||(6537465-6537536)
chr1 (109-164)||(42492280-42492335)
chr1 (113-155)||(45417699-45417741)
chr1 (104-149)||(47790691-47790736)
chr1 (187-235)||(47790726-47790777)
chr1 (109-158)||(48552883-48552932)
chr1 (109-158)||(48552992-48553041)
chr1 (66-106)||(14427352-14427392)
chr1 (66-106)||(35003299-35003339)
chr1 (66-106)||(44112682-44112722)
chr1 (66-106)||(48119633-48119673)
chr1 (138-197)||(48411972-48412031)
chr1 (187-231)||(11928235-11928277)
chr1 (109-161)||(52584880-52584930)
chr1 (66-106)||(5489781-5489821)
chr1 (66-106)||(38113250-38113290)
chr1 (66-106)||(38335923-38335963)
chr1 (66-106)||(41065158-41065198)
chr1 (66-106)||(43571141-43571181)
chr1 (109-149)||(52740915-52740955)
[»] chr2 (57 HSPs)
chr2 (109-235)||(28612212-28612339)
chr2 (109-235)||(28611787-28611914)
chr2 (105-235)||(41995732-41995863)
chr2 (105-235)||(44256469-44256600)
chr2 (109-235)||(6348072-6348199)
chr2 (109-235)||(10129476-10129603)
chr2 (104-235)||(37131467-37131598)
chr2 (137-235)||(5001678-5001777)
chr2 (109-235)||(11735910-11736036)
chr2 (109-235)||(28612636-28612761)
chr2 (109-235)||(28612847-28612975)
chr2 (109-235)||(29550133-29550265)
chr2 (133-235)||(11736325-11736428)
chr2 (109-235)||(28612000-28612127)
chr2 (112-235)||(41326372-41326496)
chr2 (109-213)||(44543717-44543821)
chr2 (109-200)||(627537-627628)
chr2 (109-235)||(3249778-3249905)
chr2 (109-231)||(5001504-5001627)
chr2 (109-235)||(28612425-28612551)
chr2 (109-215)||(12898023-12898129)
chr2 (110-203)||(5013208-5013301)
chr2 (111-235)||(29549960-29550085)
chr2 (109-213)||(44543928-44544032)
chr2 (109-235)||(3249561-3249688)
chr2 (147-235)||(5001353-5001442)
chr2 (147-235)||(5013023-5013112)
chr2 (109-235)||(29549791-29549918)
chr2 (131-235)||(11657474-11657575)
chr2 (109-231)||(12896407-12896532)
chr2 (162-235)||(627629-627703)
chr2 (151-235)||(6347935-6348019)
chr2 (172-235)||(20708899-20708963)
chr2 (130-216)||(19640327-19640414)
chr2 (130-216)||(19838920-19839007)
chr2 (183-235)||(44543661-44543714)
chr2 (109-180)||(2132238-2132309)
chr2 (66-106)||(966889-966929)
chr2 (66-106)||(1750419-1750459)
chr2 (66-106)||(11825709-11825749)
chr2 (66-106)||(16803973-16804013)
chr2 (66-106)||(16843255-16843295)
chr2 (66-106)||(18491710-18491750)
chr2 (66-106)||(41282029-41282069)
chr2 (66-106)||(43114562-43114602)
chr2 (109-231)||(17930465-17930585)
chr2 (68-106)||(7070421-7070459)
chr2 (187-231)||(15256548-15256590)
chr2 (140-181)||(17370109-17370150)
chr2 (109-165)||(20641641-20641700)
chr2 (66-106)||(4299475-4299515)
chr2 (66-106)||(12302308-12302348)
chr2 (66-106)||(12415515-12415555)
chr2 (66-106)||(12427575-12427615)
chr2 (66-106)||(16096752-16096792)
chr2 (66-106)||(34817831-34817871)
chr2 (66-106)||(43490456-43490496)
[»] chr8 (64 HSPs)
chr8 (109-235)||(1197878-1198004)
chr8 (112-235)||(27853649-27853773)
chr8 (109-215)||(23828127-23828233)
chr8 (107-235)||(23838322-23838451)
chr8 (109-235)||(3459114-3459241)
chr8 (104-235)||(23085855-23085988)
chr8 (109-235)||(29580018-29580144)
chr8 (109-235)||(32062815-32062945)
chr8 (105-235)||(23960779-23960909)
chr8 (109-235)||(37198277-37198404)
chr8 (109-235)||(37410051-37410178)
chr8 (109-235)||(33198833-33198959)
chr8 (109-235)||(35617681-35617810)
chr8 (111-231)||(39922071-39922192)
chr8 (104-235)||(40399473-40399605)
chr8 (137-235)||(38111372-38111471)
chr8 (109-215)||(23830945-23831051)
chr8 (109-235)||(44429050-44429176)
chr8 (109-235)||(23960561-23960687)
chr8 (137-235)||(34947504-34947602)
chr8 (109-231)||(30439026-30439151)
chr8 (109-235)||(37197885-37198018)
chr8 (109-215)||(37198113-37198220)
chr8 (109-231)||(37197662-37197783)
chr8 (109-235)||(13797442-13797569)
chr8 (105-215)||(37426112-37426222)
chr8 (109-235)||(2084876-2085004)
chr8 (109-235)||(44433629-44433756)
chr8 (109-235)||(44429894-44430021)
chr8 (117-235)||(42045644-42045764)
chr8 (117-202)||(18308258-18308343)
chr8 (103-213)||(43419032-43419138)
chr8 (109-175)||(23838176-23838242)
chr8 (109-235)||(33198603-33198728)
chr8 (109-235)||(44430067-44430195)
chr8 (109-235)||(44430418-44430546)
chr8 (109-235)||(44433802-44433930)
chr8 (109-235)||(604655-604781)
chr8 (188-235)||(44014524-44014571)
chr8 (112-231)||(604485-604606)
chr8 (164-235)||(1276502-1276574)
chr8 (148-235)||(3990184-3990272)
chr8 (109-165)||(39921960-39922016)
chr8 (109-235)||(44429224-44429352)
chr8 (109-235)||(44433976-44434104)
chr8 (109-155)||(37197788-37197834)
chr8 (109-235)||(44430241-44430369)
chr8 (104-158)||(34345139-34345193)
chr8 (109-155)||(39922226-39922272)
chr8 (109-167)||(44434153-44434211)
chr8 (178-235)||(38111190-38111248)
chr8 (187-235)||(604826-604875)
chr8 (66-106)||(30912617-30912657)
chr8 (66-106)||(35181521-35181561)
chr8 (66-106)||(42699262-42699302)
chr8 (109-198)||(604344-604434)
chr8 (188-235)||(604972-605020)
chr8 (66-106)||(11582771-11582811)
chr8 (66-106)||(20148765-20148805)
chr8 (66-106)||(29705367-29705407)
chr8 (66-106)||(33630048-33630088)
chr8 (66-106)||(34304793-34304833)
chr8 (66-106)||(36743538-36743578)
chr8 (66-106)||(42295200-42295240)
[»] chr5 (53 HSPs)
chr5 (109-235)||(11313979-11314107)
chr5 (108-235)||(12442131-12442259)
chr5 (109-235)||(35159704-35159830)
chr5 (104-235)||(7127554-7127686)
chr5 (109-235)||(16528600-16528727)
chr5 (109-235)||(26523138-26523265)
chr5 (109-235)||(43394932-43395058)
chr5 (105-235)||(7673196-7673329)
chr5 (101-235)||(19121899-19122034)
chr5 (109-235)||(24351450-24351577)
chr5 (114-235)||(11313807-11313929)
chr5 (109-215)||(16529135-16529241)
chr5 (109-235)||(31487063-31487189)
chr5 (121-235)||(16528793-16528908)
chr5 (105-235)||(35159415-35159545)
chr5 (109-235)||(16528959-16529084)
chr5 (109-235)||(11313640-11313769)
chr5 (101-235)||(19122235-19122370)
chr5 (109-235)||(41093047-41093175)
chr5 (132-235)||(24350897-24351001)
chr5 (109-215)||(9488069-9488175)
chr5 (107-235)||(31486814-31486943)
chr5 (109-235)||(10409525-10409652)
chr5 (109-215)||(16526197-16526304)
chr5 (109-235)||(41092870-41092995)
chr5 (109-235)||(14166160-14166289)
chr5 (109-235)||(23138032-23138160)
chr5 (109-202)||(26523268-26523361)
chr5 (109-235)||(13035178-13035309)
chr5 (109-235)||(13105153-13105284)
chr5 (138-235)||(43395107-43395207)
chr5 (109-235)||(16305348-16305473)
chr5 (130-193)||(24326546-24326609)
chr5 (130-193)||(24350732-24350795)
chr5 (130-193)||(24351286-24351349)
chr5 (136-235)||(38004646-38004744)
chr5 (109-235)||(26523414-26523542)
chr5 (109-154)||(7673100-7673145)
chr5 (109-156)||(38109886-38109933)
chr5 (109-158)||(22431585-22431634)
chr5 (188-235)||(38109946-38109994)
chr5 (66-106)||(33855098-33855138)
chr5 (109-153)||(38268880-38268924)
chr5 (195-235)||(24271123-24271164)
chr5 (195-235)||(24325983-24326024)
chr5 (195-235)||(24347745-24347786)
chr5 (66-106)||(2614704-2614744)
chr5 (66-106)||(7617138-7617178)
chr5 (66-106)||(18033987-18034027)
chr5 (66-106)||(22512310-22512350)
chr5 (66-106)||(25915042-25915082)
chr5 (66-106)||(32473449-32473489)
chr5 (66-106)||(41334718-41334758)
[»] scaffold0018 (2 HSPs)
scaffold0018 (109-232)||(163784-163908)
scaffold0018 (112-154)||(163228-163270)
[»] scaffold0504 (1 HSPs)
scaffold0504 (109-222)||(1526-1640)
[»] scaffold0013 (1 HSPs)
scaffold0013 (105-235)||(102701-102830)
[»] scaffold0240 (2 HSPs)
scaffold0240 (109-235)||(13092-13221)
scaffold0240 (143-235)||(13285-13378)
[»] scaffold0294 (1 HSPs)
scaffold0294 (104-212)||(12386-12496)
[»] scaffold0320 (1 HSPs)
scaffold0320 (103-232)||(14562-14692)
[»] scaffold0001 (1 HSPs)
scaffold0001 (109-233)||(196680-196803)
[»] scaffold0097 (1 HSPs)
scaffold0097 (172-235)||(12735-12799)
[»] scaffold1155 (2 HSPs)
scaffold1155 (188-235)||(1105-1152)
scaffold1155 (141-201)||(958-1018)
[»] scaffold0105 (2 HSPs)
scaffold0105 (188-235)||(29868-29915)
scaffold0105 (141-201)||(29721-29781)
[»] scaffold0345 (2 HSPs)
scaffold0345 (188-235)||(9064-9112)
scaffold0345 (141-201)||(9199-9259)
[»] scaffold0003 (1 HSPs)
scaffold0003 (66-106)||(45774-45814)
[»] scaffold0432 (1 HSPs)
scaffold0432 (109-154)||(5370-5415)
[»] scaffold0318 (1 HSPs)
scaffold0318 (109-158)||(5996-6045)
[»] scaffold0385 (1 HSPs)
scaffold0385 (66-106)||(11256-11296)
[»] scaffold0187 (2 HSPs)
scaffold0187 (66-106)||(14243-14283)
scaffold0187 (66-106)||(24571-24611)
[»] scaffold0119 (1 HSPs)
scaffold0119 (66-106)||(690-730)


Alignment Details
Target: chr7 (Bit Score: 119; Significance: 6e-61; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 4681001 - 4680875
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4681001 ttatttattaattttgttacgtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 4680902  T
Q  209 taaaaaatgcatcgcaccaatttcatt 235  Q
    |||||||||||||||||||||||||||    
T  4680901 taaaaaatgcatcgcaccaatttcatt 4680875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 11650113 - 11649987
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11650113 ttatttattaattttgttaggtctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 11650014  T
Q  209 taaaaaatgcatcgcaccaatttcatt 235  Q
    ||||||||||||| |||||||||||||    
T  11650013 taaaaaatgcatcacaccaatttcatt 11649987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 23591519 - 23591392
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23591519 ttatttattaattttgttagatctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 23591420  T
Q  209 taa-aaaatgcatcgcaccaatttcatt 235  Q
    ||| ||||||||||||||||||||||||    
T  23591419 taaaaaaatgcatcgcaccaatttcatt 23591392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 103 - 235
Target Start/End: Complemental strand, 12140972 - 12140839
Alignment:
Q  103 acatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaat 202  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||    
T  12140972 acatccttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgcgttattaggtttgcaattatttaacctaacaaat 12140873  T
Q  203 tccatctaaaa-aatgcatcgcaccaatttcatt 235  Q
    | ||||||||| ||||||||||||||||||||||    
T  12140872 ttcatctaaaagaatgcatcgcaccaatttcatt 12140839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 108 - 235
Target Start/End: Original strand, 16671604 - 16671732
Alignment:
Q  108 tttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 207  Q
    ||||||| || |||||||||  ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16671604 tttatttttttattttgttaggtctgcagcaatataacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccat 16671703  T
Q  208 ct-aaaaaatgcatcgcaccaatttcatt 235  Q
    || ||||||||||||||||||||||||||    
T  16671704 ctaaaaaaatgcatcgcaccaatttcatt 16671732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 108 - 235
Target Start/End: Original strand, 17645972 - 17646100
Alignment:
Q  108 tttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 207  Q
    ||||||| || |||||||||  ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17645972 tttatttttttattttgttaggtctgcagcaatataacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccat 17646071  T
Q  208 ct-aaaaaatgcatcgcaccaatttcatt 235  Q
    || ||||||||||||||||||||||||||    
T  17646072 ctaaaaaaatgcatcgcaccaatttcatt 17646100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 22774015 - 22773890
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| ||||    
T  22774015 ttatttattaattttgttacgtctgcaacaatttaacctaattttt-cccgctcatttgctttactatgtttgcaattatttaatctaacaaatttcatc 22773917  T
Q  209 taaaaaatgcatcgcaccaatttcatt 235  Q
    ||||||| |||||||||||||||||||    
T  22773916 taaaaaacgcatcgcaccaatttcatt 22773890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 9142066 - 9141938
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  9142066 ttatttattaattttgttatgtctgcagcaatttaacctaattttttcctgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 9141967  T
Q  209 taa--aaaatgcatcgcaccaatttcatt 235  Q
    |||  ||||||||| ||||||||||||||    
T  9141966 taaaaaaaatgcattgcaccaatttcatt 9141938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 48640906 - 48640778
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    ||||||||||||||||| |  ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  48640906 ttatttattaattttgtaaggtctgcagcaatttaacctaatttcttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 48640807  T
Q  209 taa--aaaatgcatcgcaccaatttcatt 235  Q
    |||  ||||||||||||||||||||||||    
T  48640806 taaaaaaaatgcatcgcaccaatttcatt 48640778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 2527059 - 2526931
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaatttttt-cccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 207  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||| |||    
T  2527059 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttcccgctcatttgctttattaggtttgcaattatttaacctaactaattacat 2526960  T
Q  208 ctaa-aaaatgcatcgcaccaatttcatt 235  Q
    |||| ||||||||||||||||||||||||    
T  2526959 ctaaaaaaatgcatcgcaccaatttcatt 2526931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 111 - 235
Target Start/End: Complemental strand, 11646312 - 11646188
Alignment:
Q  111 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatcta 210  Q
    |||||||||||||||||  |||||||||| ||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  11646312 atttattaattttgttatgtctgcagcaacttaacctaatttttttccactcatttgctttgttaggtttgcaattatttaacctaacaaattccgtcta 11646213  T
Q  211 aaaaatgcatcgcaccaatttcatt 235  Q
    |||||||||||||||||||||||||    
T  11646212 aaaaatgcatcgcaccaatttcatt 11646188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 11646502 - 11646375
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| |||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||     
T  11646502 ttatttattaattttgttacgtctgcagcaacttaatctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattccata 11646403  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||||||| ||||||||||||||    
T  11646402 taaaaaaatgcatagcaccaatttcatt 11646375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 18486634 - 18486761
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  18486634 ttatttattaattttgttaggtttgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 18486733  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||||||||  ||||||||||||    
T  18486734 taaaaaaatgcatcataccaatttcatt 18486761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 16492649 - 16492523
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16492649 ttatttattaattttgttaggtctgcagcaatttaacttatttttttcc-gctcatttgctttattatgtttgcaattatttaacctaacaaatttcatc 16492551  T
Q  209 taaaaaa-tgcatcgcaccaatttcatt 235  Q
    ||||||| |||||||||| |||||||||    
T  16492550 taaaaaagtgcatcgcactaatttcatt 16492523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 22324280 - 22324411
Alignment:
Q  105 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 204  Q
    |||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||| |||| ||| ||||| ||||||| |||||||||||||     
T  22324280 atctttatttattaattttgttaggtctgcagcaatttaacctaattgtttcccgctcatttacttttttaggtttgtaattattcaacctaacaaattt 22324379  T
Q  205 catct-aaaaaatgcatcgcaccaatttcatt 235  Q
    ||||| ||||||||||||||||||||||||||    
T  22324380 catctaaaaaaatgcatcgcaccaatttcatt 22324411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 109 - 231
Target Start/End: Complemental strand, 27716636 - 27716513
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  | | |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  27716636 ttatttattaattttgttaggttttcagcaatttaacctaattttatcccgctcatttgctttattaggtttgcaattatttaacctaacaacttccatc 27716537  T
Q  209 taa-aaaatgcatcgcaccaattt 231  Q
    ||| ||||||||||||||||||||    
T  27716536 taaaaaaatgcatcgcaccaattt 27716513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 45419741 - 45419614
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  ||||||| ||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  45419741 ttatttattaattttgttaggtctgcagtaatttaacctaatttttttaagctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 45419642  T
Q  209 taaaaa-atgcatcgcaccaatttcatt 235  Q
    |||||| |||||||||||||||||||||    
T  45419641 taaaaagatgcatcgcaccaatttcatt 45419614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 34837187 - 34837315
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttc-ccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 207  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||  ||||| ||||||||||||| |||| ||||||||||||||||||||||||||    
T  34837187 ttatttattaattttgttaggtctgcagcaatttaacctaattttttttccgcttatttgctttattaggtttacaattatttaacctaacaaattccat 34837286  T
Q  208 ct--aaaaaatgcatcgcaccaatttcat 234  Q
    ||  |||||||||||||||||||||||||    
T  34837287 ctaaaaaaaatgcatcgcaccaatttcat 34837315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 19222105 - 19222233
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttc-ccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 207  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||  ||| ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  19222105 ttatttattaattttgttagttctgcagcaatttaacctaattttttttccgttcatttgctttattaggtttacaattatttaacctaacaaattccat 19222204  T
Q  208 ctaaaaa-atgcatcgcaccaatttcatt 235  Q
    ||||||| ||||||| |||||||||||||    
T  19222205 ctaaaaatatgcatcacaccaatttcatt 19222233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 48641121 - 48640994
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||| ||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||| || ||||| ||||    
T  48641121 ttatttattaattttgttaggtctgtagcaatttaacatagttttttcccgctcatttgctttattaggtttgcaattatttaaccaaaaaaatttcatc 48641022  T
Q  209 taa-aaaatgcatcgcaccaatttcatt 235  Q
    ||| ||||||||||||||||||||||||    
T  48641021 taaaaaaatgcatcgcaccaatttcatt 48640994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 132 - 235
Target Start/End: Complemental strand, 4681227 - 4681122
Alignment:
Q  132 tgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa--aaaatgcatcgcaccaat 229  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||| ||||||||||||    
T  4681227 tgcaacaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaataaattccatctaaaaaaaatacatcgcaccaat 4681128  T
Q  230 ttcatt 235  Q
    ||||||    
T  4681127 ttcatt 4681122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 109 - 215
Target Start/End: Complemental strand, 27716414 - 27716308
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||  |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27716414 ttatttattaattttgttaggtctctagcaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaacaaattccatc 27716315  T
Q  209 taaaaaa 215  Q
    |||||||    
T  27716314 taaaaaa 27716308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 21224138 - 21224265
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||||||||| |||| ||||||||||||||||||| || ||||    
T  21224138 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctaatttgctttattaggtttacaattatttaacctaacaagtttcatc 21224237  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||| ||||||| ||||||||||    
T  21224238 taaaaaaatacatcgcatcaatttcatt 21224265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 23591736 - 23591609
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||| ||  | |||| ||||| || |||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23591736 ttatttattaattttgctaagtgtgcaacaattgaagctaattttttccctttcatttgctttattaggtttgcaattatttaacctaacaaattccatc 23591637  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||||||||||||||||||||||    
T  23591636 tgaaaaaatgcatcgcaccaatttcatt 23591609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 110 - 235
Target Start/End: Complemental strand, 45419947 - 45419820
Alignment:
Q  110 tatttattaattttgttacctctgcagcaatttaacctaattttttc-ccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    ||||||||||||||||||  |||||| |||| ||||||| ||||||  ||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  45419947 tatttattaattttgttaggtctgcatcaatctaacctatttttttttccgctcatttgctttattaggtttgtaattatttaacctaacaaattccatc 45419848  T
Q  209 taa-aaaatgcatcgcaccaatttcatt 235  Q
    ||| ||||||||||||||||||||||||    
T  45419847 taaaaaaatgcatcgcaccaatttcatt 45419820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 109 - 215
Target Start/End: Complemental strand, 11646036 - 11645930
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||     
T  11646036 ttatttattaattttgttacgtctgcaacaacttaacctaattttttcccgctcatttgctttattaggtttgtaattatttaacctaacaaatttcata 11645937  T
Q  209 taaaaaa 215  Q
    |||||||    
T  11645936 taaaaaa 11645930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 18487180 - 18487278
Alignment:
Q  138 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcatt 235  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||    
T  18487180 aatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcacaccaatttcatt 18487278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 102 - 235
Target Start/End: Complemental strand, 40450213 - 40450079
Alignment:
Q  102 aacatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaa 201  Q
    |||||| |||||||||||||||||||  ||||||||||||||||||||||| |||  |||||||||||||||||  ||||||||||||||||||||||||    
T  40450213 aacatccttatttattaattttgttaggtctgcagcaatttaacctaatttattcgtgctcatttgctttattagatttgcaattatttaacctaacaaa 40450114  T
Q  202 ttccatctaaaaa-atgcatcgcaccaatttcatt 235  Q
    || | |||||||| |||||||||| |||| |||||    
T  40450113 tttcttctaaaaatatgcatcgcaacaatatcatt 40450079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 109 - 231
Target Start/End: Complemental strand, 2354770 - 2354646
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||||||||||||||| |||| |||||| ||||||||||||||||| ||||||||||||||||  ||||||||||||||    
T  2354770 ttatttattaattttgttaggtctgcagcaatttaacgtaatgttttccagctcatttgctttattaggtttgcaattatttaatataacaaattccatc 2354671  T
Q  209 taa--aaaatgcatcgcaccaattt 231  Q
    |||  ||||||||| ||||||||||    
T  2354670 taaaaaaaatgcattgcaccaattt 2354646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 109 - 225
Target Start/End: Complemental strand, 46264389 - 46264272
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaatttttt-cccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 207  Q
    |||||||||||||||||||| |||||| ||| | ||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||| ||    
T  46264389 ttatttattaattttgttacgtctgcaacaactcaacctaatttttttccccctcatttgctttattaggtttgcaattatttaacctaacaaattctat 46264290  T
Q  208 ctaaaaaatgcatcgcac 225  Q
    ||||||||||||| ||||    
T  46264289 ctaaaaaatgcattgcac 46264272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 104 - 235
Target Start/End: Original strand, 35124720 - 35124852
Alignment:
Q  104 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 203  Q
    |||| |||||||||||| ||||||  | |||| ||||||||| |||||||||  || ||||||||||||||| |||||||||||||||||||||||||||    
T  35124720 catccttatttattaatgttgttaggtttgcaacaatttaacttaattttttgtcgttcatttgctttattaggtttgcaattatttaacctaacaaatt 35124819  T
Q  204 ccatct-aaaaaatgcatcgcaccaatttcatt 235  Q
    || ||| ||||||||||||||||||||||||||    
T  35124820 ccgtctaaaaaaatgcatcgcaccaatttcatt 35124852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 109 - 226
Target Start/End: Original strand, 30991459 - 30991578
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttc-ccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 207  Q
    |||||||| ||||||| ||| | |||| ||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30991459 ttatttatcaattttgatacgtttgcaacaatttaacttaattttttttccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 30991558  T
Q  208 ct-aaaaaatgcatcgcacc 226  Q
    || |||||||||||||||||    
T  30991559 ctaaaaaaatgcatcgcacc 30991578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 101 - 192
Target Start/End: Complemental strand, 32278249 - 32278158
Alignment:
Q  101 taacatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaa 192  Q
    ||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  32278249 taacatccttatttattaattatgttacgtctgcagcaatttaacctaattttttcccgctcatttactttattaggtttgcaattatttaa 32278158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 34837442 - 34837568
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    ||||||||| |||||||||  ||| |||||||||||| ||||||||||| |||||||| |||||||| |||||||||||||| |||||||||||| ||||    
T  34837442 ttatttatttattttgttaggtcttcagcaatttaacataattttttcc-gctcatttactttattaggtttgcaattattttacctaacaaatttcatc 34837540  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | |||||||||||||||| |||||||||    
T  34837541 taaaaaaatgcatcgcacaaatttcatt 34837568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 48641546 - 48641418
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    ||||||||||||||| |||| ||||||| || |||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  48641546 ttatttattaattttcttacgtctgcaggaacttaacctaattttt-cctgctcatttgctttattaagtttgcaattatttaacctaacaaatttcatc 48641448  T
Q  209 taa---aaaatgcatcgcaccaatttcatt 235  Q
    |||   ||||| ||||||| ||||||||||    
T  48641447 taaaaaaaaattcatcgcatcaatttcatt 48641418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 16671246 - 16671374
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaa-tttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 207  Q
    |||||||||||||||||||  |||||||||| ||||||| ||| |||| ||||||||||||| ||||| ||||||||||||||||||||||||||| |||    
T  16671246 ttatttattaattttgttaggtctgcagcaattttaaccaaatatttt-ccgctcatttgctctattaggtttgcaattatttaacctaacaaatttcat 16671344  T
Q  208 ct--aaaaaatgcatcgcaccaatttcatt 235  Q
    ||  |||||||||||||||||| |||||||    
T  16671345 ctaaaaaaaatgcatcgcaccagtttcatt 16671374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 17645614 - 17645742
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaa-tttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 207  Q
    |||||||||||||||||||  |||||||||| ||||||| ||| |||| ||||||||||||| ||||| ||||||||||||||||||||||||||| |||    
T  17645614 ttatttattaattttgttaggtctgcagcaattttaaccaaatatttt-ccgctcatttgctctattaggtttgcaattatttaacctaacaaatttcat 17645712  T
Q  208 ct--aaaaaatgcatcgcaccaatttcatt 235  Q
    ||  |||||||||||||||||| |||||||    
T  17645713 ctaaaaaaaatgcatcgcaccagtttcatt 17645742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 235
Target Start/End: Complemental strand, 2853320 - 2853195
Alignment:
Q  112 tttattaattttgttacctctgcagcaatttaacctaattttttccc-gctcatttgctttattatgtttgcaattatttaacctaacaaattccatcta 210  Q
    ||||||||||||||||| | || | |||||||||||||||||||  | | ||||||| ||||||| ||||||||||||||||||||||||||| ||||||    
T  2853320 tttattaattttgttacatttgtatcaatttaacctaattttttttcagttcatttgttttattaggtttgcaattatttaacctaacaaatttcatcta 2853221  T
Q  211 a-aaaatgcatcgcaccaatttcatt 235  Q
    | ||||||||||||||||||||||||    
T  2853220 aaaaaatgcatcgcaccaatttcatt 2853195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 4681699 - 4681576
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| |||||||||||||||| |||||||| |||| |   ||||||||||| ||||||||||||||||| ||||||||| ||||    
T  4681699 ttatttattaattttgttacgtctgcagcaatttaacttaattttt-cccgtt---ttgctttattaggtttgcaattatttaacttaacaaatttcatc 4681604  T
Q  209 taa-aaaatgcatcgcaccaatttcatt 235  Q
    ||| ||||||||||||| ||||||||||    
T  4681603 taaaaaaatgcatcgcatcaatttcatt 4681576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 103 - 199
Target Start/End: Complemental strand, 9142244 - 9142148
Alignment:
Q  103 acatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaaca 199  Q
    ||||| |||||||||||||||||||  ||||||  |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  9142244 acatccttatttattaattttgttaggtctgcaataatttaacctaattttttcccgctcatttgctttatttggtttgcaattatttaacctaaca 9142148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 109 - 187
Target Start/End: Original strand, 11646627 - 11646705
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaatta 187  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  11646627 ttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaatta 11646705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 109 - 215
Target Start/End: Original strand, 21128040 - 21128146
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  ||||||||| ||||||||||| |||| ||||| ||||||||||||| |||| || ||||||||||||||||||||| ||    
T  21128040 ttatttattaattttgttaggtctgcagcagtttaacctaatctttttccgctgatttgctttattacgtttccatttatttaacctaacaaattccttc 21128139  T
Q  209 taaaaaa 215  Q
     ||||||    
T  21128140 aaaaaaa 21128146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 43059223 - 43059308
Alignment:
Q  141 ttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaa-aatgcatcgcac 225  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||| ||||    
T  43059223 ttaacctaattttttctcgctcatttgctttattaggtttgcaattatttaatctaacaaattccatctaaaagaatgcattgcac 43059308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 4454924 - 4455051
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    ||||||||||||||| |||  |||||| ||| |||||||||| ||||||| |  ||||||| ||||| ||| ||| | ||||||||||||||||||||||    
T  4454924 ttatttattaattttattaggtctgcaacaacttaacctaatattttccctccaatttgctgtattaggttagcagtaatttaacctaacaaattccatc 4455023  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||||||||||| ||||||||||    
T  4455024 taaaaaaatgcatcgcatcaatttcatt 4455051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 1566593 - 1566485
Alignment:
Q  130 tctgcagcaatttaacctaattttttcc-cgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa--aaaatgcatcgcacc 226  Q
    |||||| |||||||||||||||||||   ||| |||||||||||||| ||||||||||||||||||||||||||| |||||||  |||||| || |||||    
T  1566593 tctgcaacaatttaacctaatttttttttcgcacatttgctttattaggtttgcaattatttaacctaacaaatttcatctaaagaaaatgaattgcacc 1566494  T
Q  227 aatttcatt 235  Q
    |||||||||    
T  1566493 aatttcatt 1566485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 132 - 235
Target Start/End: Complemental strand, 16362772 - 16362668
Alignment:
Q  132 tgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaatgcatcgcaccaatt 230  Q
    ||||||||| ||| |||||||||| ||||||||||| |||||||  |||||| ||||||||||||||||||| |||| || ||||||||||||||||||     
T  16362772 tgcagcaatgtaatctaatttttttccgctcatttgttttattagatttgcagttatttaacctaacaaatttcatcaaataaaatgcatcgcaccaata 16362673  T
Q  231 tcatt 235  Q
    |||||    
T  16362672 tcatt 16362668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 40686967 - 40686892
Alignment:
Q  138 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaa 214  Q
    ||||||| |||||||||||  | | ||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  40686967 aatttaagctaattttttca-gtttatttgctttattaggtttgcaattatttaacctaacaaattacatctaaaaa 40686892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 23591304 - 23591237
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattat 176  Q
    |||||||| ||||||||||  ||| |  ||||||||||||||||||||||||||||||||||||||||    
T  23591304 ttatttataaattttgttaggtctactacaatttaacctaattttttcccgctcatttgctttattat 23591237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 34837388 - 34837441
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctc 162  Q
    |||||||||||||||||||  |||||| |||||||||||||||||||| |||||    
T  34837388 ttatttattaattttgttaggtctgcaacaatttaacctaattttttctcgctc 34837441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 9395804 - 9395850
Alignment:
Q  186 tatttaacctaacaaattccatctaaaa-aatgcatcgcaccaattt 231  Q
    ||||||||||||||| || ||||||||| ||||||||||||||||||    
T  9395804 tatttaacctaacaattttcatctaaaacaatgcatcgcaccaattt 9395850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 34837655 - 34837701
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaatttttt 155  Q
    |||||||||| ||||||||  | ||||||||||||||||||||||||    
T  34837655 ttatttattagttttgttaggtatgcagcaatttaacctaatttttt 34837701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 6249840 - 6249897
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcattt 166  Q
    |||||||||||||||||||  ||||||||  ||||||||||| |||| || |||||||    
T  6249840 ttatttattaattttgttaggtctgcagcgttttaacctaatatttttcctctcattt 6249897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 46264135 - 46264086
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc 158  Q
    |||||||||||||||||||  |||| ||||| | ||||||||||||||||    
T  46264135 ttatttattaattttgttaaatctgtagcaactcaacctaattttttccc 46264086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 5194286 - 5194326
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||| ||||||||| |||| ||||||||||||||||    
T  5194286 tgtacaatgaggtgtatgaataaatggtgttcatgtaacat 5194326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 5810979 - 5811019
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||||||||||| || ||||||||| |||||||||||    
T  5810979 tgtacaatggggtgtaggaataaagggtggtcatgtaacat 5811019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 6249896 - 6249944
Alignment:
Q  188 tttaacctaacaaattccatctaaaa-aatgcatcgcaccaatttcatt 235  Q
    |||||||||||||| |||| | |||| ||||||||||||||||||||||    
T  6249896 tttaacctaacaaactccaacgaaaaaaatgcatcgcaccaatttcatt 6249944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 24001067 - 24001107
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  24001067 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 24001107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 26898457 - 26898497
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  26898457 tgtacaattgggtgtatgaataaaaggtgttcatgtaacat 26898497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 27535286 - 27535326
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| | |||||||| |||||||||||||||||||||    
T  27535286 tgtacaatagagtgtatgattaaagggtgttcatgtaacat 27535326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 31408688 - 31408728
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| | |||||||| |||||||||||||||||||||    
T  31408688 tgtacaatagagtgtatgattaaagggtgttcatgtaacat 31408728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 40236964 - 40236924
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| || ||||||| |||||||||||||||||||||    
T  40236964 tgtacaataggatgtatgattaaagggtgttcatgtaacat 40236924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 41861719 - 41861679
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||| ||| |||||||||| |||||||||||||||||||||    
T  41861719 tgtataattgggtgtatgaataaagggtgttcatgtaacat 41861679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 42538486 - 42538526
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  42538486 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 42538526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 43317488 - 43317448
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||| ||||||||| |||| ||||||||||||||||    
T  43317488 tgtacaatgaggtgtatgaataaatggtgttcatgtaacat 43317448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 44326223 - 44326183
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||||| ||||||| ||||||||||| |||||||||    
T  44326223 tgtacaatgggatgtatgaataaagggtgtttatgtaacat 44326183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 112; Significance: 9e-57; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 9828915 - 9829046
Alignment:
Q  105 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 204  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9828915 atctttattaattaattttgttacctctgcagcaatttaacttaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattc 9829014  T
Q  205 catct-aaaaaatgcatcgcaccaatttcatt 235  Q
    ||||| ||||||||||||||||||||||||||    
T  9829015 catctaaaaaaatgcatcgcaccaatttcatt 9829046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 25068188 - 25068316
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac-aaattccat 207  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  25068188 ttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaaattccat 25068287  T
Q  208 ct-aaaaaatgcatcgcaccaatttcatt 235  Q
    || ||||||||||||||||||||||||||    
T  25068288 ctaaaaaaatgcatcgcaccaatttcatt 25068316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 109 - 231
Target Start/End: Complemental strand, 17906906 - 17906784
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  | |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  17906906 ttatttattaattttgttaggtttgcagcaatttaacctaattttttccagctcatttgctttattaggtttgtaattatttaacctaacaaattccatc 17906807  T
Q  209 taaaaaatgcatcgcaccaattt 231  Q
    ||||||||| |||||||||||||    
T  17906806 taaaaaatgtatcgcaccaattt 17906784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 4811168 - 4811040
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||    
T  4811168 ttatttatttattttgttacgtctgcagcaatttaacctaattttttcccgctcgtttgctttattaggtttgcaattatttaacctaactaattccatc 4811069  T
Q  209 taa--aaaatgcatcgcaccaatttcatt 235  Q
    |||  |||||| |||||||||||||||||    
T  4811068 taaaaaaaatgaatcgcaccaatttcatt 4811040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 17201597 - 17201724
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| |||||| ||||||||||||| ||||| ||||||||||| ||||||| ||||||||||||||||||||||||||| ||||    
T  17201597 ttatttattaattttgttacgtctgcaacaatttaacctaacttttttccgctcatttgttttattaggtttgcaattatttaacctaacaaatttcatc 17201696  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||||||||||||||||||||||    
T  17201697 taaaaaaatgcatcgcaccaatttcatt 17201724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 17202850 - 17202977
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||| ||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||    
T  17202850 ttatttataaattttgttaggtctgcagcaatttaacctaattttttcccgcccatttgctttattagatttgcaattatttaacctaacaaattccatc 17202949  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||||||||||| ||||||||||    
T  17202950 taaaaaaatgcatcgcatcaatttcatt 17202977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 25067962 - 25068089
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||| ||||||||| ||||    
T  25067962 ttatttgttaattttgttacatctgcagcaatttaacctaatttttttccgctcatttgctttataaggtttgcaattatttaacataacaaattacatc 25068061  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||||||||||||||||||||||    
T  25068062 taaaaaaatgcatcgcaccaatttcatt 25068089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 23610432 - 23610559
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaa-ttttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 207  Q
    |||||||||||||||||||  |||||| ||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  23610432 ttatttattaattttgttaggtctgcaacaatttaacctaatttttttcccgctcatttgctttattaggttt-caattatttaacctaacaaattccat 23610530  T
Q  208 cta-aaaaatgcatcgcaccaatttcatt 235  Q
    ||| |||||||||||||||||||||||||    
T  23610531 ctacaaaaatgcatcgcaccaatttcatt 23610559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 27579598 - 27579725
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    ||||||||||||||||||   |||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||    
T  27579598 ttatttattaattttgttcggtctgcaacaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaacaaattcaatc 27579697  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | |||||||||||| |||||||||||||    
T  27579698 taaaaaaatgcatcacaccaatttcatt 27579725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 4100424 - 4100293
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatt----tgctttattatgtttgcaattatttaacctaacaaattc 204  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||| |||||    ||||||||||||||||||||||||||| |||||||||||    
T  4100424 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgttcattaatttgctttattatgtttgcaattatttaagctaacaaattc 4100325  T
Q  205 catctaa-aaaatgcatcgcaccaatttcatt 235  Q
    ||||||| ||||||||||||||||||||||||    
T  4100324 catctaaaaaaatgcatcgcaccaatttcatt 4100293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 104 - 235
Target Start/End: Original strand, 808467 - 808598
Alignment:
Q  104 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 203  Q
    |||| |||||||||||||||||||  |||||||||||||||| |||||||||| ||||||||||||||||||  ||||||||||||||| || |||||||    
T  808467 catccttatttattaattttgttagttctgcagcaatttaacgtaattttttctcgctcatttgctttattagatttgcaattatttaa-cttacaaatt 808565  T
Q  204 ccatctaaaaaa-tgcatcgcaccaatttcatt 235  Q
    | |||||||||| ||||||||||||||||||||    
T  808566 ctatctaaaaaattgcatcgcaccaatttcatt 808598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 27315283 - 27315413
Alignment:
Q  105 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 204  Q
    ||||||||||||||||||||||   |||||||||| |||||||||||||||||  || ||||||||||||| ||||||||||||||||||||||||||||    
T  27315283 atctttatttattaattttgttcggtctgcagcaacttaacctaattttttcca-ctaatttgctttattaggtttgcaattatttaacctaacaaattc 27315381  T
Q  205 catct-aaaaaatgcatcgcaccaatttcatt 235  Q
     |||| |||||||||||| |||||||||||||    
T  27315382 aatctaaaaaaatgcatcacaccaatttcatt 27315413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 808829 - 808958
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaatttttt-cccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 207  Q
    |||| ||||||||||||||  |||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||| |||||||| |||    
T  808829 ttatctattaattttgttaggtctgcagcaatttaacctaatttttttcccactcatttgctttattaggtttgcaattatttaaccaaacaaatttcat 808928  T
Q  208 ctaaa--aaatgcatcgcaccaatttcatt 235  Q
    |||||  ||||||||| ||| |||||||||    
T  808929 ctaaaataaatgcatcacactaatttcatt 808958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 17199986 - 17200112
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||| |||||||||||||||| ||||||| |||||||||| ||||| |||  || | ||||||||||| ||||| ||||    
T  17199986 ttatttattaattttgttaggtctgtagcaatttaacctaatattttccctctcatttgctatattaggttaacagtaatttaacctaataaatttcatc 17200085  T
Q  209 taaaaaatgcatcgcaccaatttcatt 235  Q
    |||||||||||||||||||||||||||    
T  17200086 taaaaaatgcatcgcaccaatttcatt 17200112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 109 - 231
Target Start/End: Original strand, 23622218 - 23622341
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  ||||||  |||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||| || |    
T  23622218 ttatttattaattttgttaggtctgcaataatttaacctaactttttcccactcatttgctttattaggtttgcaattatttaacctaacaaatttcagc 23622317  T
Q  209 t-aaaaaatgcatcgcaccaattt 231  Q
    | ||||||||  ||||||||||||    
T  23622318 taaaaaaatgtgtcgcaccaattt 23622341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 32208513 - 32208386
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaatta-tttaacctaacaaattccat 207  Q
    |||||||||||||||| ||  |||||| |||||||| |||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  32208513 ttatttattaattttgctaggtctgcaacaatttaatctaattttttcc-gctcatttgctttattaggtttgcaattattttaacctaacaaattccat 32208415  T
Q  208 cta-aaaaatgcatcgcaccaatttcatt 235  Q
    ||| |||||||||||  || |||||||||    
T  32208414 ctagaaaaatgcatcagactaatttcatt 32208386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 17202661 - 17202758
Alignment:
Q  140 tttaacctaattttttcc-cgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcatt 235  Q
    |||||||||||||||| | |||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||    
T  17202661 tttaacctaatttttttcacgctcatttgctttattaggtttgcaattatttaatctaacaaattccatctaaaaaaatgtatcgcaccaatttcatt 17202758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 26832622 - 26832495
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc-gctcatttgctttattatgtttgcaattatttaacctaacaaattccat 207  Q
    ||||||||||| |||||||  | |||| ||||||||||||||||||| || ||| ||||||||||||| ||||||||||||||||| ||||||||| |||    
T  26832622 ttatttattaactttgttagat-tgcaacaatttaacctaatttttttccagcttatttgctttattaggtttgcaattatttaacttaacaaattacat 26832524  T
Q  208 ctaa-aaaatgcatcgcaccaatttcatt 235  Q
    |||| ||||||||| ||||||||||||||    
T  26832523 ctaaaaaaatgcatagcaccaatttcatt 26832495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 109 - 215
Target Start/End: Original strand, 15130899 - 15131005
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| |||||||||| ||||| ||| | ||| || |||||| |||||||||  |||||||||||||||||||||||||||| ||    
T  15130899 ttatttattaattttgttacgtctgcagcaacttaacgtaaatattttccactcattcgctttattagatttgcaattatttaacctaacaaattccctc 15130998  T
Q  209 taaaaaa 215  Q
    |||||||    
T  15130999 taaaaaa 15131005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 29201558 - 29201673
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||            |||||||||||||||||||| ||||    
T  29201558 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctcatttgcttt------------attatttaacctaacaaatttcatc 29201645  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | |||||||||||| |||||||||||||    
T  29201646 taaaaaaatgcatcacaccaatttcatt 29201673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 23902528 - 23902634
Alignment:
Q  130 tctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc-taaaaaatgcatcgcaccaa 228  Q
    ||||||||||||||||||||| |||||||| ||||||| | ||||| |||  || | |||||||||||||||||| ||| |||||||||||| |||||||    
T  23902528 tctgcagcaatttaacctaatattttcccgttcatttgttgtattaggttaccagtaatttaacctaacaaattctatcttaaaaaatgcattgcaccaa 23902627  T
Q  229 tttcatt 235  Q
    |||||||    
T  23902628 tttcatt 23902634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 17080035 - 17080163
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    ||||||||||||||| |||  ||||||||||  ||||||||| ||||||  |  ||||||| ||||| ||| ||| | |||||||||||||||||| |||    
T  17080035 ttatttattaattttattatgtctgcagcaacctaacctaatattttccgtccaatttgctgtattaggttagcattaatttaacctaacaaattctatc 17080134  T
Q  209 t--aaaaaatgcatcgcaccaatttcatt 235  Q
    |  ||||||||||||||||||||||||||    
T  17080135 tagaaaaaatgcatcgcaccaatttcatt 17080163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 808693 - 808811
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  ||||| |||||||||||||| ||||||||||||||||          |||||||||||||||||||||||||||  |||    
T  808693 ttatttattaattttgttatgtctgctgcaatttaacctaa-tttttcccgctcattt---------agtttgcaattatttaacctaacaaattttatc 808782  T
Q  209 t--aaaaaatgcatcgcaccaatttcatt 235  Q
    |  |||||||||||| ||| |||||||||    
T  808783 taaaaaaaatgcatcccactaatttcatt 808811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 185
Target Start/End: Original strand, 17011130 - 17011185
Alignment:
Q  130 tctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaat 185  Q
    ||||||||||||||||||||| |||||||||||||||| | ||||||||| |||||    
T  17011130 tctgcagcaatttaacctaatattttcccgctcatttgatgtattatgttagcaat 17011185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 1393582 - 1393644
Alignment:
Q  111 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttat 173  Q
    |||||||||||||||||  ||||||||||||||| ||||||||||  || |||||||||||||    
T  1393582 atttattaattttgttaagtctgcagcaatttaaactaattttttttcggtcatttgctttat 1393644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 4125755 - 4125709
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaatttttt 155  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||    
T  4125755 ttatttattaattttgttaggtctgcagcaatttaacctaatttttt 4125709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 197
Target Start/End: Original strand, 8685155 - 8685236
Alignment:
Q  111 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaa 197  Q
    |||||||||||||||||  |||||| ||||||||     | |||||||||||||||||| ||||||||| ||||| |||||||||||    
T  8685155 atttattaattttgttaggtctgcaacaatttaa-----tattttcccgctcatttgctgtattatgttagcaataatttaacctaa 8685236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 197
Target Start/End: Original strand, 8674476 - 8674557
Alignment:
Q  111 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaa 197  Q
    |||||||||||||||||  |||||| ||||||||     | |||||||||| ||||||| ||||||||| ||||| |||||||||||    
T  8674476 atttattaattttgttaggtctgcaacaatttaa-----tattttcccgcttatttgctgtattatgttagcaataatttaacctaa 8674557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 32208634 - 32208573
Alignment:
Q  152 ttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaa 213  Q
    |||| ||||| |||||||| ||||  ||| |||||||||||| |||||||||||||||||||    
T  32208634 tttttccgctgatttgcttgattagatttccaattatttaacttaacaaattccatctaaaa 32208573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 17011026 - 17011074
Alignment:
Q  110 tatttattaattttgttacctctgcagcaatttaacctaattttttccc 158  Q
    ||||||||||||||||||  |||||||||| |||||||||||| |||||    
T  17011026 tatttattaattttgttaagtctgcagcaacttaacctaatttcttccc 17011074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 27441587 - 27441547
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  27441587 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 27441547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 19121169 - 19121216
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttc 156  Q
    |||||||||||||||||||  ||||||||||||||| ||||| |||||    
T  19121169 ttatttattaattttgttagatctgcagcaatttaatctaatattttc 19121216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 17010917 - 17010963
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaatttttt 155  Q
    |||||||||||||||||||  ||||||||||||||| | ||||||||    
T  17010917 ttatttattaattttgttaagtctgcagcaatttaatcaaatttttt 17010963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 155
Target Start/End: Complemental strand, 33482488 - 33482438
Alignment:
Q  105 atctttatttattaattttgttacctctgcagcaatttaacctaatttttt 155  Q
    ||||||||||||||||||| |||| ||||||| || |||||||||| ||||    
T  33482488 atctttatttattaattttattacgtctgcagtaacttaacctaatatttt 33482438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 9698388 - 9698428
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  9698388 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 9698428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 25068140 - 25068184
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaatttt 153  Q
    |||||||||||||||||||| | |||||| ||||||| |||||||    
T  25068140 ttatttattaattttgttacgtgtgcagctatttaacataatttt 25068184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 26466844 - 26466804
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||||||||||| || ||||||||||| |||||||||    
T  26466844 tgtacaatggggtgtaggaataaagggtgtttatgtaacat 26466804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 26670064 - 26670104
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||| |||||| || |||||||||||||||||||||    
T  26670064 tgtacaatgaggtgtaggaataaagggtgttcatgtaacat 26670104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 31109277 - 31109317
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||| |||||| ||||||| |||||||||||||||||||||    
T  31109277 tgtataatgggatgtatgattaaagggtgttcatgtaacat 31109317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 108; Significance: 2e-54; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 48076190 - 48076317
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  48076190 ttatttattaattttgttacgtctgcagcaatttaatctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 48076289  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||||||||||||||||||||||    
T  48076290 taaaaaaatgcatcgcaccaatttcatt 48076317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 23952610 - 23952484
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||     
T  23952610 ttatttattaattttgttacgtctgcagcaatttaacctaattttttcacgctcatttgctttattaggtttgcaattatttaacctaaaaaattccatt 23952511  T
Q  209 taaaaaatgcatcgcaccaatttcatt 235  Q
    |||||||||||||||||||||||||||    
T  23952510 taaaaaatgcatcgcaccaatttcatt 23952484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 112 - 235
Target Start/End: Original strand, 48076371 - 48076495
Alignment:
Q  112 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-a 210  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |    
T  48076371 tttattaattttgttacgtctgcagcaatttaacctaatttttccccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatctaa 48076470  T
Q  211 aaaaatgcatcgcaccaatttcatt 235  Q
    |||||||||||||||||||||||||    
T  48076471 aaaaatgcatcgcaccaatttcatt 48076495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 4941674 - 4941805
Alignment:
Q  105 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 204  Q
    |||||||||||||||||||||||| ||| ||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  4941674 atctttatttattaattttgttacatctacaataatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattt 4941773  T
Q  205 catct-aaaaaatgcatcgcaccaatttcatt 235  Q
    ||||| ||||||||||||||||||||||||||    
T  4941774 catctaaaaaaatgcatcgcaccaatttcatt 4941805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 36639172 - 36639299
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  36639172 ttatttattaattttgttacgtttgtagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 36639271  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||||||||||||||||||||||    
T  36639272 taaaaaaatgcatcgcaccaatttcatt 36639299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 23952886 - 23952759
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  23952886 ttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgttttattaggtttgcaattatttaacttaacaaattccatc 23952787  T
Q  209 taa-aaaatgcatcgcaccaatttcatt 235  Q
    ||| |||||||||||| |||||||||||    
T  23952786 taaaaaaatgcatcgcgccaatttcatt 23952759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 54653755 - 54653628
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||    
T  54653755 ttatttattaattttgttacgtctgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcagttatttaacctaacaaattcaatc 54653656  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | |||||||||||| |||||||||||||    
T  54653655 taaaaaaatgcatcacaccaatttcatt 54653628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 47768952 - 47769080
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| ||||    
T  47768952 ttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgcttcattaggtttgcaattatttaacctaacaaatttcatc 47769051  T
Q  209 t--aaaaaatgcatcgcaccaatttcatt 235  Q
    |  |||||||||||| |||||||||||||    
T  47769052 ttaaaaaaatgcatcacaccaatttcatt 47769080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 102 - 235
Target Start/End: Complemental strand, 2481761 - 2481630
Alignment:
Q  102 aacatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaa 201  Q
    ||||||||||| ||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||    
T  2481761 aacatctttatctattaattttgttacgtctgcaacaacttaacctaattttttcccgctcatttgctttattaggtttgca---atttaacctaacaaa 2481665  T
Q  202 ttccatct-aaaaaatgcatcgcaccaatttcatt 235  Q
    |||||||| ||||||||||||||||||||||||||    
T  2481664 ttccatctaaaaaaatgcatcgcaccaatttcatt 2481630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 2177260 - 2177391
Alignment:
Q  105 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 204  Q
    ||||||||||||||||| |||||  |||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||     
T  2177260 atctttatttattaattctgttagatctgcagcaatttaatttaattttttcccgctcatttgctttattaggtttgcaattacttaacctaacaaattt 2177359  T
Q  205 catctaaaaa-atgcatcgcaccaatttcatt 235  Q
    |||||||||| |||||||||||||||||||||    
T  2177360 catctaaaaacatgcatcgcaccaatttcatt 2177391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 53144951 - 53144824
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||    
T  53144951 ttatttattaattttgttagatctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgtaattatttaacctaacaaatttcatc 53144852  T
Q  209 taaaaa-atgcatcgcaccaatttcatt 235  Q
    |||||| |||||| | ||||||||||||    
T  53144851 taaaaatatgcattgtaccaatttcatt 53144824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 109 - 231
Target Start/End: Original strand, 22292898 - 22293020
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||| ||  |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||     
T  22292898 ttatttattaattttgctaggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattcaata 22292997  T
Q  209 taaaaaatgcatcgcaccaattt 231  Q
     ||||||||||||||||||||||    
T  22292998 aaaaaaatgcatcgcaccaattt 22293020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 7821303 - 7821430
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  | ||||||||||||||||||||||||||||| ||||||||||||||   ||||||||||||||||||| ||||||||||    
T  7821303 ttatttattaattttgttaggtatgcagcaatttaacctaattttttcccgcccatttgctttattaatgttgcaattatttaacctaataaattccatc 7821402  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||||||||||||||||||||||    
T  7821403 taaaaaaatgcatcgcaccaatttcatt 7821430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 24049565 - 24049692
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  | |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||    
T  24049565 ttatttattaattttgttaggtgtgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacgaatttcatc 24049664  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | |||||||||||| |||||||||||||    
T  24049665 taaaaaaatgcatcacaccaatttcatt 24049692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 28379867 - 28379741
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  28379867 ttatttattaattttgttaggtctgcatcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaac-aattccatc 28379769  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||||||||||||||| ||||||    
T  28379768 taaaaaaatgcatcgcaccaagttcatt 28379741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 43161846 - 43161719
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  43161846 ttatttattaatcttgttacgtctgcaacaatttaacctaattttttcccgctcatttgcattattaggtttgcaattatttaacctaacaaatttcatc 43161747  T
Q  209 taa-aaaatgcatcgcaccaatttcatt 235  Q
    ||| ||||| ||||||||||||| ||||    
T  43161746 taaaaaaatacatcgcaccaattccatt 43161719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 52689728 - 52689597
Alignment:
Q  105 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 204  Q
    ||||||||||||||||||| |||  ||||||  |||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||     
T  52689728 atctttatttattaattttattaggtctgcattaatttatcctaattttttcccgctcatttgctttattaggtttgtaattatttaacctaacaaattt 52689629  T
Q  205 catctaa-aaaatgcatcgcaccaatttcatt 235  Q
    ||||||| ||||||||||||||||||||||||    
T  52689628 catctaaaaaaatgcatcgcaccaatttcatt 52689597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 21585662 - 21585536
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||||| || |||||||||||||||| ||||||||||||||||| ||||||||| ||||    
T  21585662 ttatttattaattttgttacgtctgcaacaatttaacttaatttttttcctctcatttgctttattaggtttgcaattatttaacttaacaaatttcatc 21585563  T
Q  209 taaaaaatgcatcgcaccaatttcatt 235  Q
    ||||||||| |||| ||||||||||||    
T  21585562 taaaaaatgtatcgtaccaatttcatt 21585536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 109 - 226
Target Start/End: Original strand, 48076545 - 48076664
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| | |||||||||||||||||||||||| ||||| ||||||||||||| |||| |||||||||||||||||||||||||||    
T  48076545 ttatttattaattttgttacgtttgcagcaatttaacctaatttttttccgctaatttgctttattaggtttacaattatttaacctaacaaattccatc 48076644  T
Q  209 t--aaaaaatgcatcgcacc 226  Q
    |  |||||||||||||||||    
T  48076645 taaaaaaaatgcatcgcacc 48076664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 7796785 - 7796912
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||| |||     
T  7796785 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggattgtaattatttaacctaacaaatttcatt 7796884  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | |||||||||||||||||||| |||||    
T  7796885 taaaaaaatgcatcgcaccaatctcatt 7796912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 112 - 211
Target Start/End: Original strand, 44500675 - 44500774
Alignment:
Q  112 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa 211  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  44500675 tttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacgtaacaaattccatctaa 44500774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 7821519 - 7821646
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||| ||||||||||||||||||||| | ||||||||||||||||| ||||| ||||||||||||||  ||||| ||||    
T  7821519 ttatttattaattttgttaggtctggagcaatttaacctaattttttactgctcatttgctttattaggtttgtaattatttaacctacaaaatttcatc 7821618  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||||||||||||||||||||||    
T  7821619 taaaaaaatgcatcgcaccaatttcatt 7821646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 12796226 - 12796099
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    ||||||||||||||| |||  | || ||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||| |||||||||||||||    
T  12796226 ttatttattaattttattaggtatgtagcaatttaacctaatttttttccgctcatttgttttattaggtttgcaattatttaatctaacaaattccatc 12796127  T
Q  209 taaaaa-atgcatcgcaccaatttcatt 235  Q
    |||||| |||||||||||||| ||||||    
T  12796126 taaaaatatgcatcgcaccaacttcatt 12796099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 29967179 - 29967307
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  | |||||||| ||||||||||||||||||||||||||| |||||||  ||||||||||| |||||||||||||||||||    
T  29967179 ttatttattaattttgttaggtttgcagcaacttaacctaattttttcccgctcatttgttttattagatttgcaattatataacctaacaaattccatc 29967278  T
Q  209 t--aaaaaatgcatcgcaccaatttcatt 235  Q
    |  ||||||||||| ||| ||||||||||    
T  29967279 taaaaaaaatgcattgcatcaatttcatt 29967307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 8118608 - 8118724
Alignment:
Q  120 ttttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgc 218  Q
    ||||||||  |||||| ||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||| ||||| |||||||||    
T  8118608 ttttgttaggtctgcaacaatttaacctaatttttttccgctcatttgctttattagggttgcaattatttaacctaacaaatttcatctaaaaaaatgc 8118707  T
Q  219 atcgcaccaatttcatt 235  Q
     ||||||||||||||||    
T  8118708 ttcgcaccaatttcatt 8118724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 109 - 232
Target Start/End: Original strand, 36639345 - 36639469
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||| ||||||||||||||  | |||||||||||||||||||||||||||| |||||| |||||||| | ||||||||||||||||||||||||| ||||    
T  36639345 ttatatattaattttgttaggtttgcagcaatttaacctaattttttcccgttcattttctttattaggattgcaattatttaacctaacaaatttcatc 36639444  T
Q  209 t-aaaaaatgcatcgcaccaatttc 232  Q
    | |||||||| ||||||||||||||    
T  36639445 taaaaaaatgtatcgcaccaatttc 36639469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 8397848 - 8397721
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| | |||| |||| ||||||| ||||||||||||||||| ||||||||| ||||    
T  8397848 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttctgctcgtttgttttattaggtttgcaattatttaacttaacaaatttcatc 8397749  T
Q  209 taa-aaaatgcatcgcaccaatttcatt 235  Q
    ||| ||||||||| |||||| |||||||    
T  8397748 taaaaaaatgcattgcaccattttcatt 8397721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 47631360 - 47631487
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  | |||| |||||||||||||||| || | ||| ||||||||| ||| ||||||||||||||||||||||||||| ||||    
T  47631360 ttatttattaattttgttaggtatgcatcaatttaacctaatttatttctgctaatttgctttgttaggtttgcaattatttaacctaacaaatttcatc 47631459  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||||||||||||||||||||||    
T  47631460 taaaaaaatgcatcgcaccaatttcatt 47631487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 8118383 - 8118509
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||| ||||| |||||| ||||||||| ||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  8118383 ttatttattaattt-gttacgtctgcaacaatttaacttaatttttttc-gctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 8118480  T
Q  209 t--aaaaaatgcatcgcaccaatttcatt 235  Q
    |  ||||||||||| ||||||||||||||    
T  8118481 taaaaaaaatgcattgcaccaatttcatt 8118509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 104 - 215
Target Start/End: Complemental strand, 28389882 - 28389771
Alignment:
Q  104 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 203  Q
    |||| |||||||||||||||||||  | ||||| |||| | |||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  28389882 catcattatttattaattttgttaggtttgcagtaattcatcctaatattttcccgctcatttgctttattaggtttgcatttatttaacctaacaaatt 28389783  T
Q  204 ccatctaaaaaa 215  Q
    ||||||||||||    
T  28389782 ccatctaaaaaa 28389771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 7809348 - 7809474
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    ||||| |||||||||||||  | |||| ||||| ||||||||||||| | ||||||||||||||||| ||||| ||||||||||||||| ||||| ||||    
T  7809348 ttattcattaattttgttaggtatgcaacaattgaacctaatttttttctgctcatttgctttattaggtttgtaattatttaacctaaaaaatttcatc 7809447  T
Q  209 t-aaaaaatgcatcgcaccaatttcat 234  Q
    | |||||||||||||||||||||||||    
T  7809448 taaaaaaatgcatcgcaccaatttcat 7809474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 21581351 - 21581254
Alignment:
Q  140 tttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaatgca-tcgcaccaatttcatt 235  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||    
T  21581351 tttaacctaattttttctcgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcattcgcaccaatttcatt 21581254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 235
Target Start/End: Original strand, 22292701 - 22292818
Alignment:
Q  119 attttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatcta-aaaaatg 217  Q
    |||||||||  ||||||  |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  22292701 attttgttaggtctgcaataatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaataccatctagaaaaatg 22292800  T
Q  218 catcgcaccaatttcatt 235  Q
    ||| | | ||||||||||    
T  22292801 catggtatcaatttcatt 22292818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 109 - 215
Target Start/End: Complemental strand, 32010789 - 32010682
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacct-aacaaattccat 207  Q
    |||||||||||||||||||| ||||||| ||||||| |||||||||| |||||||||| |||||||| ||||| |||||||| |||| ||||||||||||    
T  32010789 ttatttattaattttgttacgtctgcagtaatttaaactaatttttttccgctcattttctttattaggtttgtaattattttacctaaacaaattccat 32010690  T
Q  208 ctaaaaaa 215  Q
    ||||||||    
T  32010689 ctaaaaaa 32010682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 28813225 - 28813352
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  | | || |||||||| |||||||||||| ||||||||||||||||| ||||| |||||||||||| |||||||| ||||    
T  28813225 ttatttattaattttgttaggtttacaacaatttaatctaattttttcc-gctcatttgctttattaggtttgtaattatttaaccaaacaaatttcatc 28813323  T
Q  209 t--aaaaaatgcatcgcaccaatttcatt 235  Q
    |  ||||||||||| ||||||||||||||    
T  28813324 taaaaaaaatgcattgcaccaatttcatt 28813352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 28380077 - 28379959
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||||| |||||||||||||||||| |  ||||||||| ||||||| |||||||||||||||||||||||||||||       
T  28380077 ttatttattaattttgttaggtctgcaccaatttaacctaattttt-cttgctcatttgttttattaggtttgcaattatttaacctaacaaattcc--- 28379982  T
Q  209 taaaaaatgcatcgcaccaatttcatt 235  Q
        |||||||||||||||||||||||    
T  28379981 ----aaatgcatcgcaccaatttcatt 28379959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 8479206 - 8479123
Alignment:
Q  151 tttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcatt 235  Q
    ||||| |||||||||||||||||||  |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  8479206 ttttttccgctcatttgctttattagatttgcaattatt-aacctaacaaatttcatctaaaaaatgcatcgcaccaatttcatt 8479123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 134 - 235
Target Start/End: Complemental strand, 43162006 - 43161901
Alignment:
Q  134 cagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct----aaaaaatgcatcgcaccaat 229  Q
    |||||||||||| ||| |||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||| |    ||||||||||| ||||||||    
T  43162006 cagcaatttaacttaactttttcacgctcatttgctttattaggtttgcaattatttaacttaacaaattccatttaaaaaaaaaatgcattgcaccaat 43161907  T
Q  230 ttcatt 235  Q
    ||||||    
T  43161906 ttcatt 43161901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 235
Target Start/End: Complemental strand, 47428513 - 47428394
Alignment:
Q  117 taattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaa 215  Q
    |||||||||||| | |||||||| |||||||||| ||||||| | |||||| | ||||| ||| ||| | ||||||||||||||||||||||||| ||||    
T  47428513 taattttgttacatatgcagcaacttaacctaatattttccctcccatttgttgtattaggttagcagtaatttaacctaacaaattccatctaaaaaaa 47428414  T
Q  216 tgcatcgcaccaatttcatt 235  Q
    |||||| |||||||||||||    
T  47428413 tgcatctcaccaatttcatt 47428394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 47631539 - 47631666
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    ||||||||||||||||| |  |||||| |||||||||||||||| |||  |||| |||||||||||| ||||||||||||||||||||||||||| ||||    
T  47631539 ttatttattaattttgtcaggtctgcatcaatttaacctaatttattct-gctcttttgctttattaggtttgcaattatttaacctaacaaatt-catc 47631636  T
Q  209 ---taaaaaatgcatcgcaccaatttcatt 235  Q
        |||||||||||||| |||||||||||    
T  47631637 caaaaaaaaatgcatcgccccaatttcatt 47631666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 138 - 231
Target Start/End: Original strand, 7809561 - 7809655
Alignment:
Q  138 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaattt 231  Q
    |||||||||||||||||| | |||||||||||||||||  |||| ||||||||||||||| ||||| ||||| ||||||||||||||||||||||    
T  7809561 aatttaacctaatttttttctgctcatttgctttattagatttgtaattatttaacctaaaaaatttcatctaaaaaaatgcatcgcaccaattt 7809655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 104 - 231
Target Start/End: Original strand, 8079013 - 8079141
Alignment:
Q  104 catctttatttattaattttgttacctctgcagcaatttaacctaatttttt-cccgctcatttgctttattatgtttgcaattatttaacctaacaaat 202  Q
    |||| |||||||||||||||||||  |||| |||||||||| |||||||||| |||||||||||| | ||||| ||| ||| |  |||||||||||||||    
T  8079013 catcattatttattaattttgttagttctggagcaatttaagctaattttttccccgctcatttgttgtattaggttagcagtagtttaacctaacaaat 8079112  T
Q  203 tccatctaaaaa-atgcatcgcaccaattt 231  Q
    |||||||||||| |||||| ||||||||||    
T  8079113 tccatctaaaaagatgcat-gcaccaattt 8079141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 8079327 - 8079401
Alignment:
Q  141 ttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaa 215  Q
    |||||||||||||||||  ||||||  |||||||| |||||||||||||||||||||||||||||||||||||||    
T  8079327 ttaacctaattttttcctactcattacctttattaggtttgcaattatttaacctaacaaattccatctaaaaaa 8079401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 15456295 - 15456363
Alignment:
Q  112 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgttt 180  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  15456295 tttattaattttgttaggtctgcagcaatttaacctaattttatcccactcatttgctttattaggttt 15456363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 15463679 - 15463747
Alignment:
Q  112 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgttt 180  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  15463679 tttattaattttgttaggtctgcagcaatttaacctaattttatcccactcatttgctttattaggttt 15463747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 109 - 167
Target Start/End: Original strand, 24046065 - 24046123
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttg 167  Q
    |||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||    
T  24046065 ttatttattaattttgttaggtgtgcagcaatttaacctaattttttcccgctcatttg 24046123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 24049337 - 24049410
Alignment:
Q  163 atttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcatt 235  Q
    ||||||||||||| ||||||||||||||||||| ||||||| ||||| |||||||||||||||| | |||||||    
T  24049337 atttgctttattaggtttgcaattatttaacctgacaaatttcatctaaaaaaatgcatcgcactagtttcatt 24049410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 114 - 212
Target Start/End: Original strand, 8078897 - 8078997
Alignment:
Q  114 tattaattttgttacctctgcagcaatttaacctaatttttt-cccgctca-tttgctttattatgtttgcaattatttaacctaacaaattccatctaa 211  Q
    ||||||||||||||  |||| |||||||||| |||||||||| |||||||| ||| || ||||||||| ||| |  ||||||||||||||||||||||||    
T  8078897 tattaattttgttaggtctgtagcaatttaagctaattttttccccgctcattttactgtattatgttagcagtagtttaacctaacaaattccatctaa 8078996  T
Q  212 a 212  Q
    |    
T  8078997 a 8078997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 41852188 - 41852122
Alignment:
Q  172 attatgtttgcaattatttaacctaacaaattccatctaa--aaaatgca-tcgcaccaatttcatt 235  Q
    |||| ||||||||||||||||||||||||||| |||||||  |||||||| ||||||||||||||||    
T  41852188 attaggtttgcaattatttaacctaacaaatttcatctaaaaaaaatgcattcgcaccaatttcatt 41852122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 2526941 - 2526990
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc 158  Q
    |||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  2526941 ttatttattaattttggtaggtctgcagcaatttaacctaattttttccc 2526990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 235
Target Start/End: Complemental strand, 7526556 - 7526423
Alignment:
Q  103 acatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaat 202  Q
    ||||| || ||||| |||||| |||  |||||||||| ||||||||||  |||||| || |  ||||  | || ||| ||| | ||||||||||||||||    
T  7526556 acatccttgtttatcaattttattaggtctgcagcaacttaacctaataatttccctctaaaatgctgaagtaggttagcagtaatttaacctaacaaat 7526457  T
Q  203 tccatctaaaaa-atgcatcgcaccaatttcatt 235  Q
    |||||||||||| ||||||| || ||||||||||    
T  7526456 tccatctaaaaatatgcatcacatcaatttcatt 7526423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 23952658 - 23952613
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttt 154  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||    
T  23952658 ttatttattaattttgttacgtctgcagtaatttaacctaattttt 23952613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 23952706 - 23952661
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttt 154  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||    
T  23952706 ttatttattaattttgttacgtctgcagtaatttaacctaattttt 23952661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 8079456 - 8079502
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaatttttt 155  Q
    |||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  8079456 ttatttattaattttgttacgtctgcagcagtttaacctaatatttt 8079502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 712005 - 711965
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  712005 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 711965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 1771321 - 1771361
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  1771321 tgtacaatggggtgtaggaataaagggtgttcatgtaacat 1771361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 3756301 - 3756341
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  3756301 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 3756341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 28988518 - 28988478
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||| ||||||||| |||||||||||||||||||||    
T  28988518 tgtacaatgaggtgtatgaataaagggtgttcatgtaacat 28988478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 18002170 - 18002111
Alignment:
Q  109 ttatttattaattttgttacc---tctgcagcaatttaacctaattttttcccgctcatt 165  Q
    |||||||||||||||||||     |||||| ||| |||||||||||||||||||||||||    
T  18002170 ttatttattaattttgttattaggtctgcaacaagttaacctaattttttcccgctcatt 18002111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 47428347 - 47428298
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc 158  Q
    |||||||||||||||||||  ||| || |||||||||||||| |||||||    
T  47428347 ttatttattaattttgttagatctacaacaatttaacctaatattttccc 47428298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 960925 - 960965
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| | |||||||| |||||||||||||||||||||    
T  960925 tgtacaatagagtgtatgattaaagggtgttcatgtaacat 960965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 17619207 - 17619247
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  17619207 tgtacaatagggtgtatgattaaaaggtgttcatgtaacat 17619247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 32728402 - 32728362
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| |||||||||| |||||| ||||||||||||||    
T  32728402 tgtacaatagggtgtatgattaaaggatgttcatgtaacat 32728362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 41878451 - 41878411
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||| ||||||||| ||||| |||||||||||||||    
T  41878451 tgtacaatgaggtgtatgaataaagagtgttcatgtaacat 41878411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 43514741 - 43514781
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||||| ||||| || |||||||||||||||||||||    
T  43514741 tgtacaatggagtgtaggaataaagggtgttcatgtaacat 43514781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 46827761 - 46827801
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| | |||||||| |||||||||||||||||||||    
T  46827761 tgtacaatagagtgtatgattaaagggtgttcatgtaacat 46827801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 55966401 - 55966441
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||||| ||||||| ||||||||||| |||||||||    
T  55966401 tgtacaatgggatgtatgaataaagggtgtttatgtaacat 55966441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 5e-52; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 46451470 - 46451597
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  46451470 ttatttattaattttgttacgtctgcagtaatttaacctaattttttcccgttcatttgctttattaggtttgcaattatttaacctaacaaattccatc 46451569  T
Q  209 taaaa-aatgcatcgcaccaatttcatt 235  Q
    ||||| ||||||||||||||||||||||    
T  46451570 taaaataatgcatcgcaccaatttcatt 46451597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 47503159 - 47503032
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  47503159 ttatttattaattttgttacgtctgcagcaatttaacctaattttttcccgctcatttgcattattaggtttgcaattatttaacctaacaaatttcatc 47503060  T
Q  209 taa-aaaatgcatcgcaccaatttcatt 235  Q
    ||| ||||||||||||||||||||||||    
T  47503059 taaaaaaatgcatcgcaccaatttcatt 47503032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 53047697 - 53047567
Alignment:
Q  105 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 204  Q
    |||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||     
T  53047697 atctttatttattaattttgttaggtctgcagcaatttaacataattttttcccgctcatttgctttgttaggtttgcaattatttaacctaacaaattt 53047598  T
Q  205 catctaaaaaatgcatcgcaccaatttcatt 235  Q
    ||| |||||||||||||||||||||||||||    
T  53047597 catttaaaaaatgcatcgcaccaatttcatt 53047567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 111 - 232
Target Start/End: Original strand, 43017273 - 43017396
Alignment:
Q  111 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct- 209  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||     
T  43017273 atttattaattttgttacgtctgcagcaatttaacctaattttttcccgctcatttgctttattaagtttgcaattatttaacctaacaaatttcatcta 43017372  T
Q  210 -aaaaaatgcatcgcaccaatttc 232  Q
     ||||||||||| |||||||||||    
T  43017373 aaaaaaatgcattgcaccaatttc 43017396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 837309 - 837182
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    ||||||||||||||| |||  |||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  837309 ttatttattaattttattatgtctgcaacaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 837210  T
Q  209 taa-aaaatgcatcgcaccaatttcatt 235  Q
    ||| ||||||||||||||||||||||||    
T  837209 taaaaaaatgcatcgcaccaatttcatt 837182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 18094956 - 18095083
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  18094956 ttatttattaattttgttaggtctgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcaatgatttaacctaacaaattccatc 18095055  T
Q  209 -taaaaaatgcatcgcaccaatttcatt 235  Q
     ||||||||| |||||||||||||||||    
T  18095056 ttaaaaaatgaatcgcaccaatttcatt 18095083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 109 - 231
Target Start/End: Complemental strand, 36643233 - 36643110
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  36643233 ttatttattaattttgttacgtatgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 36643134  T
Q  209 taa-aaaatgcatcgcaccaattt 231  Q
    ||| |||||| |||||||||||||    
T  36643133 taaaaaaatgtatcgcaccaattt 36643110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 38887471 - 38887343
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||     
T  38887471 ttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcata 38887372  T
Q  209 taaaaaa--tgcatcgcaccaatttcatt 235  Q
    |||||||  || |||||||||||||||||    
T  38887371 taaaaaaagtggatcgcaccaatttcatt 38887343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 106 - 235
Target Start/End: Original strand, 35560098 - 35560229
Alignment:
Q  106 tctttatttattaattttgttacctctgcagcaatttaacctaa-ttttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 204  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||| || |||||||||||||||| |||||||||||||||||||||||||||     
T  35560098 tctttatttattaattttgttacttctgcagcaatttaacctaattttttttcctctcatttgctttattaggtttgcaattatttaacctaacaaattt 35560197  T
Q  205 cat-ctaaaaaatgcatcgcaccaatttcatt 235  Q
    ||| | ||||||||||||||||||||||||||    
T  35560198 catccaaaaaaatgcatcgcaccaatttcatt 35560229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 109 - 224
Target Start/End: Original strand, 11454562 - 11454679
Alignment:
Q  109 ttatttattaatttt-gttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 207  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  11454562 ttatttattaatttttgttacgtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaatcatttaacctaacaaattccat 11454661  T
Q  208 c-taaaaaatgcatcgca 224  Q
    | ||||||||||||||||    
T  11454662 cttaaaaaatgcatcgca 11454679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 104 - 235
Target Start/End: Original strand, 11454200 - 11454332
Alignment:
Q  104 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 203  Q
    |||| |||||||||||||||||||  |||||| |||||||||||||||||||||||||||| | |||||||  |||||||||||||||||||||||||||    
T  11454200 catccttatttattaattttgttatgtctgcaacaatttaacctaattttttcccgctcatctactttatttggtttgcaattatttaacctaacaaatt 11454299  T
Q  204 ccatct-aaaaaatgcatcgcaccaatttcatt 235  Q
     ||||| ||||||||||||||||||||||||||    
T  11454300 tcatctaaaaaaatgcatcgcaccaatttcatt 11454332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 18094741 - 18094868
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||     
T  18094741 ttatttattaattttgttaggtctgcagcaatttaacttaattttttcccgctaatttgctttattaggtttgcaattatttaacctaacaaatcccata 18094840  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | |||||| |||||||||||||||||||    
T  18094841 taaaaaaaagcatcgcaccaatttcatt 18094868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 113 - 235
Target Start/End: Original strand, 37760501 - 37760624
Alignment:
Q  113 ttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat-ctaa 211  Q
    |||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| | ||    
T  37760501 ttattaattttgttacgtctgcaacaatttaacctaaatttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatccaaa 37760600  T
Q  212 aaaatgcatcgcaccaatttcatt 235  Q
    |||||| |||||||||||||||||    
T  37760601 aaaatgtatcgcaccaatttcatt 37760624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 109 - 231
Target Start/End: Original strand, 40050850 - 40050972
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    ||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||    
T  40050850 ttatttatttattttgttagttctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaataatttaacctaacaaatt-catc 40050948  T
Q  209 ta-aaaaatgcatcgcaccaattt 231  Q
    || |||||||||||||||||||||    
T  40050949 tacaaaaatgcatcgcaccaattt 40050972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 20877322 - 20877195
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||| |||||   ||||||||||||||||||| ||||    
T  20877322 ttatttattaattttgttacgtctgcagcaatttaatctaattttttccctctcatttactttattaggtttgtcgttatttaacctaacaaatttcatc 20877223  T
Q  209 taa-aaaatgcatcgcaccaatttcatt 235  Q
    ||| ||||||||||||||||||||||||    
T  20877222 taaaaaaatgcatcgcaccaatttcatt 20877195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 38887686 - 38887557
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttc--ccgctcatttgctttattatgtttgcaattatttaacctaacaaattcca 206  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||||   ||||||||||||||||||| |||||||||||||||||||||||||||||     
T  38887686 ttatttattaattttattaggtctgcagcaatttaacctaatttttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattcct 38887587  T
Q  207 tct-aaaaaatgcatcgcaccaatttcatt 235  Q
    ||| |||||||||||||||| |||||||||    
T  38887586 tctaaaaaaatgcatcgcacaaatttcatt 38887557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 47503333 - 47503205
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaatttttt-cccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 207  Q
    ||||||||||||||| |||| ||| |  |||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  47503333 ttatttattaattttattacgtctacgacaatttaacctattttttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcat 47503234  T
Q  208 ctaa-aaaatgcatcgcaccaatttcatt 235  Q
    |||| ||||||||||||||||||||||||    
T  47503233 ctaaaaaaatgcatcgcaccaatttcatt 47503205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 109 - 215
Target Start/End: Complemental strand, 45514524 - 45514419
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||| |||||||| ||||||||||||||||||||| ||||| ||||    
T  45514524 ttatttattaattttgttacgtctgcagcaatttaatctaattttttcccgttcatttactttatta-gtttgcaattatttaacctaataaatttcatc 45514426  T
Q  209 taaaaaa 215  Q
    |||||||    
T  45514425 taaaaaa 45514419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 11454381 - 11454511
Alignment:
Q  109 ttatttattaattttgtt---acctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattcc 205  Q
    ||||||||||||||||||   || |||||||||||||| ||||||||||||  ||||||||||||||||| | ||||||||||||||||||||||| | |    
T  11454381 ttatttattaattttgttgttacgtctgcagcaatttatcctaattttttct-gctcatttgctttattaggcttgcaattatttaacctaacaaacttc 11454479  T
Q  206 atct--aaaaaatgcatcgcaccaatttcatt 235  Q
    ||||  ||||||||||||||||||||||||||    
T  11454480 atctaaaaaaaatgcatcgcaccaatttcatt 11454511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 109 - 215
Target Start/End: Complemental strand, 16015356 - 16015250
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||| ||||||||  ||| | | |||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||| |||    
T  16015356 ttatttattagttttgttaggtctacggaaatttaacctaattttttcccgctcatttgctttattaggttaacaattatttaacctaacaaattctatc 16015257  T
Q  209 taaaaaa 215  Q
    |||||||    
T  16015256 taaaaaa 16015250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 47519955 - 47520053
Alignment:
Q  138 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaa-aaatgcatcgcaccaatttcatt 235  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| || |||||||||| |||||||||||| ||||| ||||    
T  47519955 aatttaacctaattttttcccgctcatttgctttattagggttgcaattatttaacctaaccaagtccatctaaagaaatgcatcgcatcaattccatt 47520053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 111 - 235
Target Start/End: Original strand, 43819330 - 43819455
Alignment:
Q  111 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatcta 210  Q
    |||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||| ||||| |||  || | ||||||||||| || || ||||||    
T  43819330 atttattaattttgttaggtctgcagcaatttaacctaatattttcccgctcatttgctgtattaagttaacactaatttaacctaataattttcatcta 43819429  T
Q  211 aaa-aatgcatcgcaccaatttcatt 235  Q
    ||| ||||||| ||||||||||||||    
T  43819430 aaacaatgcattgcaccaatttcatt 43819455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 113 - 198
Target Start/End: Complemental strand, 47519956 - 47519871
Alignment:
Q  113 ttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac 198  Q
    |||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  47519956 ttattaattttgttagttttgcagcaatttaacctaattttttcccgctcatttgctttattaagtttgtaattatttaacctaac 47519871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 146 - 235
Target Start/End: Original strand, 46451320 - 46451411
Alignment:
Q  146 ctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct--aaaaaatgcatcgcaccaatttcatt 235  Q
    ||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||    
T  46451320 ctaatttttccccgctcatttgctttattagatttgcaattatttaacctaacaaatttcatctaaaaaaaatgcatcgcaccaatttcatt 46451411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 109 - 204
Target Start/End: Complemental strand, 38887901 - 38887806
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 204  Q
    ||||||||||||||| | |  ||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  38887901 ttatttattaattttatcaggtctgcagtaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacgtaacaaattc 38887806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 109 - 224
Target Start/End: Original strand, 11453937 - 11454054
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcc-cgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 207  Q
    |||||||||||||||||||| | || |  ||||||| |||||||||| | || ||||||||||||||| ||||||||||||||||||||||||||| |||    
T  11453937 ttatttattaattttgttacgtttgaaataatttaatctaatttttttctcgttcatttgctttattaggtttgcaattatttaacctaacaaattacat 11454036  T
Q  208 ct-aaaaaatgcatcgca 224  Q
    || |||||||||||||||    
T  11454037 ctaaaaaaatgcatcgca 11454054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 110 - 235
Target Start/End: Complemental strand, 21969111 - 21968987
Alignment:
Q  110 tatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct 209  Q
    |||||||||||||| |||  || |||||||||||| |||||||||| |  |  ||||||| ||||| ||| ||| | |||||||||||||||||||||||    
T  21969111 tatttattaattttattaggtcagcagcaatttaatctaatttttttctcca-atttgctgtattaggttagcagtaatttaacctaacaaattccatct 21969013  T
Q  210 aaaaaatgcatcgcaccaatttcatt 235  Q
    ||||||||||||||||||||||||||    
T  21969012 aaaaaatgcatcgcaccaatttcatt 21968987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 110 - 235
Target Start/End: Complemental strand, 21991547 - 21991423
Alignment:
Q  110 tatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct 209  Q
    |||||||||||||| |||  || |||||||||||| |||||||||| |  |  ||||||| ||||| ||| ||| | |||||||||||||||||||||||    
T  21991547 tatttattaattttattaggtcagcagcaatttaatctaatttttttctcca-atttgctgtattaggttagcagtaatttaacctaacaaattccatct 21991449  T
Q  210 aaaaaatgcatcgcaccaatttcatt 235  Q
    ||||||||||||||||||||||||||    
T  21991448 aaaaaatgcatcgcaccaatttcatt 21991423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 24365763 - 24365840
Alignment:
Q  138 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaa 215  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||| |||||||||||    
T  24365763 aatttaacctaattttttcccgctcatttgatttattaggtttgcaattatttaacctaacgaatttcatctaaaaaa 24365840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 11522532 - 11522661
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  ||| || ||||||||||||||||||| | | ||||||| ||||||| |||| ||||| |||||||||||||||| ||||    
T  11522532 ttatttattaattttgttaggtctacaacaatttaacctaatttttttcagttcatttgttttattaggtttacaattgtttaacctaacaaatttcatc 11522631  T
Q  209 taaaaa---atgcatcgcaccaatttcatt 235  Q
    ||||||   ||| | |||||||||||||||    
T  11522632 taaaaatatatgaaccgcaccaatttcatt 11522661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 112 - 235
Target Start/End: Original strand, 11220780 - 11220903
Alignment:
Q  112 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-a 210  Q
    ||||||||||||||||  ||||||||||||||||||||| |||| || || ||||||| ||||| ||| ||| | |||| |||||||||||| ||||| |    
T  11220780 tttattaattttgttaggtctgcagcaatttaacctaatatttttcc-cttatttgctgtattaggttagcagtaattttacctaacaaatttcatctaa 11220878  T
Q  211 aaaaatgcatcgcaccaatttcatt 235  Q
    |||||||||| ||||||||||||||    
T  11220879 aaaaatgcattgcaccaatttcatt 11220903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 109 - 215
Target Start/End: Original strand, 46451078 - 46451181
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||| ||| |||||| ||||||||  ||||||||| |||||||||| ||   ||| |||||||||||||||||||||||||||| |||    
T  46451078 ttatttattaattttgatacgtctgcaacaatttaaattaatttttttccgctcatttcct---ttaagtttgcaattatttaacctaacaaattctatc 46451174  T
Q  209 taaaaaa 215  Q
    |||||||    
T  46451175 taaaaaa 46451181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 109 - 213
Target Start/End: Original strand, 850932 - 851036
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||  ||| | || ||||||||||| ||||||||| ||||||||||  ||||||| ||||||||||||||||  ||||||||| ||||    
T  850932 ttatttattaatttttgtacatttgtagcaatttaacttaatttttttccgctcatttattttattaggtttgcaattatttaagttaacaaatttcatc 851031  T
Q  209 taaaa 213  Q
    |||||    
T  851032 taaaa 851036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 51654074 - 51654138
Alignment:
Q  139 atttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 203  Q
    ||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||    
T  51654074 atttaacctaattttttcccgctcatttgttttattaggtttacaattatttaacctaacaaatt 51654138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 145 - 235
Target Start/End: Original strand, 52300747 - 52300838
Alignment:
Q  145 cctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcatt 235  Q
    |||||||||||||||||||||| || ||||| ||| ||| | ||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  52300747 cctaattttttcccgctcatttactgtattaggttagcagtaatttaacctaacaaattccatttaaaaaaatgcattgcaccaatttcatt 52300838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 3847825 - 3847944
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  ||||||||||||||||||||| ||||| |||||||||||| ||        |   | ||||||||||||||||| ||||    
T  3847825 ttatttattaattttgttaggtctgcagcaatttaacctaatattttcgcgctcatttgctgta--------gtggtgatttaacctaacaaatttcatc 3847916  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||||||||||||||||||||||    
T  3847917 taaaaaaatgcatcgcaccaatttcatt 3847944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 851039 - 851088
Alignment:
Q  183 aattatttaacctaacaaattccatctaaaa-aatgcatcgcaccaattt 231  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  851039 aattatttaacctaacaaatttcatctaaaagaatgcatcgcaccaattt 851088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 231
Target Start/End: Complemental strand, 25917546 - 25917426
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    ||||||||||||||| |||  |||||||||| ||||||||||  |||||| || |  || |  |||| ||| |||   ||||||||||||||||||||||    
T  25917546 ttatttattaattttattaagtctgcagcaacttaacctaataatttccctctaaaatgttacattaggttagcagcaatttaacctaacaaattccatc 25917447  T
Q  209 taaaaaatgcatcgcaccaattt 231  Q
    |  |||||||| |||||||||||    
T  25917446 t--aaaatgcagcgcaccaattt 25917426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 46451252 - 46451299
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttc 156  Q
    |||||||||||||||||||| ||| || ||||||||||||||||||||    
T  46451252 ttatttattaattttgttacgtctccaacaatttaacctaattttttc 46451299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 201
Target Start/End: Original strand, 54274787 - 54274824
Alignment:
Q  164 tttgctttattatgtttgcaattatttaacctaacaaa 201  Q
    |||||||||||| |||||||||||||||||||||||||    
T  54274787 tttgctttattaggtttgcaattatttaacctaacaaa 54274824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 4190320 - 4190360
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  4190320 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 4190360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 17755732 - 17755840
Alignment:
Q  105 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 204  Q
    ||||||||||||||||||| |||  || ||||||||||||||||||  |||||| || |  || |  ||||  || |||   ||||||||||||||||||    
T  17755732 atctttatttattaattttattaggtccgcagcaatttaacctaataatttccctctaaaatgttgcattagattagcagcaatttaacctaacaaattc 17755831  T
Q  205 catctaaaa 213  Q
    |||||||||    
T  17755832 catctaaaa 17755840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 19057052 - 19057160
Alignment:
Q  105 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 204  Q
    ||||||||||||||||||| |||  || ||||||||||||||||||  |||||| || |  || |  ||||  || |||   ||||||||||||||||||    
T  19057052 atctttatttattaattttattaggtccgcagcaatttaacctaataatttccctctaaaatgttgcattagattagcagcaatttaacctaacaaattc 19057151  T
Q  205 catctaaaa 213  Q
    |||||||||    
T  19057152 catctaaaa 19057160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 25413726 - 25413686
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  25413726 tgtacaatggggtgtaggaataaagggtgttcatgtaacat 25413686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 54246203 - 54246243
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  54246203 tgtacaatggggtgtaggaataaagggtgttcatgtaacat 54246243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 54274725 - 54274774
Alignment:
Q  183 aattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaattt 231  Q
    ||||||||||||||||||||| ||||| |||||||||||||  |||||||    
T  54274725 aattatttaacctaacaaatttcatctaaaaaaatgcatcgtcccaattt 54274774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 9434169 - 9434129
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| | |||||||| |||||||||||||||||||||    
T  9434169 tgtacaatagagtgtatgattaaagggtgttcatgtaacat 9434129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 10457947 - 10457987
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  10457947 tgtacaatagggtgtatgattaaaaggtgttcatgtaacat 10457987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 36150175 - 36150135
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||| |||||||||||||| |||||||| ||||||||||||    
T  36150175 tgtataatggggtgtatgaataaagggtattcatgtaacat 36150135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 40480794 - 40480754
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||||||  ||||| |||||||||||||||||||||    
T  40480794 tgtacaatggggcatatgaataaagggtgttcatgtaacat 40480754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 42100733 - 42100693
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||| |||||| || |||||||||||||||||||||    
T  42100733 tgtacaatgaggtgtaggaataaagggtgttcatgtaacat 42100693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 45126983 - 45127023
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||||| ||||||| ||||||||||| |||||||||    
T  45126983 tgtacaatgggatgtatgaataaagggtgtttatgtaacat 45127023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 47191080 - 47191120
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||| |||||| || |||||||||||||||||||||    
T  47191080 tgtacaatgaggtgtaggaataaagggtgttcatgtaacat 47191120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 53581913 - 53581953
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||||| |||||||| ||||| |||||||||||||||    
T  53581913 tgtacaatggagtgtatgaataaagagtgttcatgtaacat 53581953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 54237141 - 54237101
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  54237141 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 54237101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 5e-52; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 318555 - 318682
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  318555 ttatttattaattttgttacgtctgcagcaatttaatctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 318654  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||||||||||||||||||||||    
T  318655 taaaaaaatgcatcgcaccaatttcatt 318682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 1156171 - 1156044
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1156171 ttatttattaatattgttacggctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 1156072  T
Q  209 taa-aaaatgcatcgcaccaatttcatt 235  Q
    ||| ||||||||||||||||||||||||    
T  1156071 taaaaaaatgcatcgcaccaatttcatt 1156044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 44263089 - 44263216
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  44263089 ttatttattaattttgttaagtctgcagcaatttaacctaattttttcccgttcatttgctttattaggtttgcaattatttaacctaacaaattccatc 44263188  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||||||||||||||||||||||    
T  44263189 taaaaaaatgcatcgcaccaatttcatt 44263216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 51113906 - 51114033
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||    
T  51113906 ttatttattaattttgttacgtctgcagcaatttaacctaattttttcccgttcatttactttattaggtttgcaattatttaacctaacaaattccatc 51114005  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||||||||||||||||||||||    
T  51114006 taaaaaaatgcatcgcaccaatttcatt 51114033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 5428528 - 5428654
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  5428528 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 5428627  T
Q  209 taaaaaatgcatcgcaccaatttcatt 235  Q
    |||||||||| ||||||||||||||||    
T  5428628 taaaaaatgcttcgcaccaatttcatt 5428654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 27296162 - 27296288
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| |||||| |||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  27296162 ttatttattaattttgttacgtctgcaacaatttaacctaatttttccccgcttatttgctttattaggtttgcaattatttaacctaataaattccatc 27296261  T
Q  209 taaaaaatgcatcgcaccaatttcatt 235  Q
    |||||||||||||||||||||||||||    
T  27296262 taaaaaatgcatcgcaccaatttcatt 27296288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 42492271 - 42492143
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  42492271 ttatttattaattttgttaggtctgcagcaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaacaaattccatc 42492172  T
Q  209 taa--aaaatgcatcgcaccaatttcatt 235  Q
    |||  ||||||||||||||||||||||||    
T  42492171 taaaaaaaatgcatcgcaccaatttcatt 42492143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 105 - 230
Target Start/End: Original strand, 44262660 - 44262785
Alignment:
Q  105 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 204  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||    
T  44262660 atctttatttattaattttgttaggtctgcagcaatttaacctaatttttttccactcatttgctttattacgtttgcaattatttaacctaacaaattc 44262759  T
Q  205 catctaaaaaatgcatcgcaccaatt 230  Q
    ||||||||||||||| ||||||||||    
T  44262760 catctaaaaaatgcaacgcaccaatt 44262785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 109 - 226
Target Start/End: Original strand, 51114090 - 51114208
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  51114090 ttatttattaattttgttacgtctgtagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 51114189  T
Q  209 t-aaaaaatgcatcgcacc 226  Q
    | |||||||||||||||||    
T  51114190 taaaaaaatgcatcgcacc 51114208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 38684015 - 38684142
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  | |||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  38684015 ttatttattaattttgttaggtttgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcgattatttaacctaacaaattccatc 38684114  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||||||||||||||||||||||    
T  38684115 taaaaaaatgcatcgcaccaatttcatt 38684142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 16165792 - 16165664
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  16165792 ttatttattaattttgttaggtctgtagcaatttaacctaattttttcccgatcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 16165693  T
Q  209 taa--aaaatgcatcgcaccaatttcatt 235  Q
    |||  ||||||||||||||||||||||||    
T  16165692 taaaaaaaatgcatcgcaccaatttcatt 16165664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 51113723 - 51113851
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||    
T  51113723 ttatttattaattttgttacgtttgcagcaatttaacctaatttttttccgctcatttgctttattagatttgcaattatttaacctaacaaatttcatc 51113822  T
Q  209 t--aaaaaatgcatcgcaccaatttcatt 235  Q
    |  ||||||||||||||||||||||||||    
T  51113823 taaaaaaaatgcatcgcaccaatttcatt 51113851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 21617752 - 21617883
Alignment:
Q  105 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 204  Q
    ||||||||| |||||||||||||  ||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  21617752 atctttattcattaattttgttaggtctgcattaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattt 21617851  T
Q  205 catct-aaaaaatgcatcgcaccaatttcatt 235  Q
    ||||| |||||||||||||||| |||||||||    
T  21617852 catctaaaaaaatgcatcgcactaatttcatt 21617883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 27296337 - 27296464
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||| ||||    
T  27296337 ttatttattaattttgttacgtctgcaacaatttaacctaattttttctcgctcattttctttattaggtttgcaattatttaacctaacaaatttcatc 27296436  T
Q  209 ta-aaaaatgcatcgcaccaatttcatt 235  Q
    || |||||| ||||||||||||||||||    
T  27296437 tataaaaatacatcgcaccaatttcatt 27296464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 42497397 - 42497268
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||| ||  |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  42497397 ttatttattaattttgataggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 42497298  T
Q  209 t---aaaaaatgcatcgcaccaatttcatt 235  Q
    |   ||||||||||| ||||||||||||||    
T  42497297 tgaaaaaaaatgcattgcaccaatttcatt 42497268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 3227328 - 3227201
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3227328 ttatttattaattttgttagatctgcatcaatttaacctaatttttttc-gctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 3227230  T
Q  209 taa--aaaatgcatcgcaccaatttcatt 235  Q
    |||  ||||||||| ||||||||||||||    
T  3227229 taaaaaaaatgcattgcaccaatttcatt 3227201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 52740700 - 52740828
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  | || ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||| |||    
T  52740700 ttatttattaattttgttaggtttgaagcaatttaacctaattttttcccgctcatttgctttattaggtttacaattatttaacttaacaaattcaatc 52740799  T
Q  209 t--aaaaaatgcatcgcaccaatttcatt 235  Q
    |  ||||||||||||||||||||||||||    
T  52740800 taaaaaaaatgcatcgcaccaatttcatt 52740828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 109 - 213
Target Start/End: Complemental strand, 42497039 - 42496935
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  42497039 ttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgttttattagatttgcaattatttaacctaacaaattccatc 42496940  T
Q  209 taaaa 213  Q
    |||||    
T  42496939 taaaa 42496935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 1647543 - 1647670
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  ||||||||| |||||||||| ||||| | ||||||||||||||||| ||||| ||||||||||||||||||||| ||||    
T  1647543 ttatttattaattttgttaggtctgcagcagtttaacctaagttttttctgctcatttgctttattaggtttggaattatttaacctaacaaatttcatc 1647642  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | |||||||| |||||||||||||||||    
T  1647643 taaaaaaatgaatcgcaccaatttcatt 1647670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 44263310 - 44263437
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||||| |||| ||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  44263310 ttatttattaattttgttaggtctgcatcaatataacctaattttttctcgctcatttgccttattaggtttgcaattatttaacctaacaaattacatc 44263409  T
Q  209 -taaaaaatgcatcgcaccaatttcatt 235  Q
      ||||||||||||||| ||||||||||    
T  44263410 gaaaaaaatgcatcgcatcaatttcatt 44263437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 110 - 235
Target Start/End: Complemental strand, 4100691 - 4100566
Alignment:
Q  110 tatttattaattttgttacctctgcagcaatttaacctaatttttt-cccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    ||||||||||||||||||  ||||||| |||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| ||||||||| |||     
T  4100691 tatttattaattttgttaggtctgcagtaatttaacctaatttttttcccgctcatttgttttattaagtttgcaattatttaacttaacaaatttcata 4100592  T
Q  209 taaaaaatgcatcgcaccaatttcatt 235  Q
    ||||||| |||||||||||||||||||    
T  4100591 taaaaaa-gcatcgcaccaatttcatt 4100566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 5428933 - 5429046
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||| |||||||| |||||||||| |||||||||||||||| |||||||||||||||    
T  5428933 ttatttattaattttgttagatctgcagcaatttaaactaatttttttccgctcatctgctttattaggtttgcaattatttaagctaacaaattccatc 5429032  T
Q  209 taaaa-aatgcatc 221  Q
    ||||| ||||||||    
T  5429033 taaaataatgcatc 5429046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 104 - 235
Target Start/End: Original strand, 5429043 - 5429179
Alignment:
Q  104 catctttatttattaattttgttacctctgcagcaatttaacctaatttttt----cccgctcatttgctttattatgtttgcaattatttaacctaaca 199  Q
    |||| ||||||||||| |||||||  | ||||||||||||||||||||| ||    |||||||| ||||||||||| |||||||||||||||||||||||    
T  5429043 catccttatttattaactttgttaggtgtgcagcaatttaacctaatttattttcccccgctcaattgctttattaggtttgcaattatttaacctaaca 5429142  T
Q  200 aattccatct-aaaaaatgcatcgcaccaatttcatt 235  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  5429143 aattccatctaaaaaaatgcatagcaccaatttcatt 5429179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 113 - 235
Target Start/End: Complemental strand, 6537757 - 6537630
Alignment:
Q  113 ttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaa 212  Q
    |||||||||||||||  || ||| ||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  6537757 ttattaattttgttaggtcagcaacaatttaacttaattttttcccgctcatttactttattaggtttgcaattatttaacctaacaaattccatctaaa 6537658  T
Q  213 aa-----atgcatcgcaccaatttcatt 235  Q
    ||     |||||| ||||||||||||||    
T  6537657 aaaatgcatgcatggcaccaatttcatt 6537630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 111 - 235
Target Start/End: Complemental strand, 28950274 - 28950149
Alignment:
Q  111 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatcta 210  Q
    |||||||||||||||||| || ||| ||||||||| ||||||||| |||| ||||||||||||||  |||| ||||||||||||||||||||| ||||||    
T  28950274 atttattaattttgttacgtccgcaacaatttaacttaatttttttccgcacatttgctttattagatttgaaattatttaacctaacaaatttcatcta 28950175  T
Q  211 a-aaaatgcatcgcaccaatttcatt 235  Q
    | |||||||||| |||||||||||||    
T  28950174 aaaaaatgcatctcaccaatttcatt 28950149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 18912327 - 18912455
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttg-caattatttaacctaacaaattccat 207  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||| |||||  ||||||||||| ||||||||| |||    
T  18912327 ttatttattaattttgttatgtctgcagcaatttaacctaatttttttccgcccatttgctttattaggtttgtaaattatttaacttaacaaatttcat 18912426  T
Q  208 ct-aaaaaatgcatcgcaccaatttcatt 235  Q
    || ||||||||||| ||| ||||||||||    
T  18912427 ctaaaaaaatgcatagcatcaatttcatt 18912455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 28950365 - 28950277
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaa 197  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  28950365 ttatttattaattttgttacgtctccagcaatttaacctaattttttcccgctaatttgctttattaggtttgcaattatttaacctaa 28950277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 42497574 - 42497448
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  ||||||| |||||||| |||||||||  |||||||||  ||||||| ||||| ||||||||||| ||||||||| |||     
T  42497574 ttatttattaattttgttaggtctgcagtaatttaacttaattttttttcgctcatttattttattaggtttgtaattatttaacttaacaaatttcatt 42497475  T
Q  209 taaaaaatgcatcgcaccaatttcatt 235  Q
    ||||||||| |||||||||||||||||    
T  42497474 taaaaaatgtatcgcaccaatttcatt 42497448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 109 - 215
Target Start/End: Complemental strand, 51272598 - 51272492
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  ||| || ||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  51272598 ttatttattaattttgttaggtctacaacaatttaacctaatttttttctgctcatttgctttattaggtttgcaattatttaacctaataaattccatc 51272499  T
Q  209 taaaaaa 215  Q
     ||||||    
T  51272498 aaaaaaa 51272492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 111 - 231
Target Start/End: Complemental strand, 28949995 - 28949875
Alignment:
Q  111 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct- 209  Q
    |||||||||||||||||| |||| ||| |||||||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||||||| ||| |     
T  28949995 atttattaattttgttacgtctgaagctatttaacctaattttt-cccgcacatttgctttattaggtttgtaattatttaacctaacaaatttcatata 28949897  T
Q  210 aaaaaatgcatcgcaccaattt 231  Q
    ||||||||||||||| ||||||    
T  28949896 aaaaaatgcatcgcatcaattt 28949875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 117 - 235
Target Start/End: Complemental strand, 4100890 - 4100771
Alignment:
Q  117 taattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaa 215  Q
    |||||||||||  ||||||||||||||| |||||||||| ||||||||| | |||||||  |||||||||||||||||||| ||||| ||||||| ||||    
T  4100890 taattttgttaggtctgcagcaatttaatctaatttttttccgctcattagttttattagatttgcaattatttaacctaaaaaatttcatctaaaaaaa 4100791  T
Q  216 tgcatcgcaccaatttcatt 235  Q
    || |||||||||||||||||    
T  4100790 tggatcgcaccaatttcatt 4100771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 44099747 - 44099651
Alignment:
Q  138 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcatt 235  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||| ||||||||||||||    
T  44099747 aatttaacctaattttttttcgctcatttgctttattaggtttgcaattatttaacctaataaatttcatct-aaaaatgcattgcaccaatttcatt 44099651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 18912214 - 18912322
Alignment:
Q  108 tttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttg-caattatttaacctaacaaattcca 206  Q
    ||||||||||||||||||||  ||||||||||||||| |||||||||| |||||||||| |||||||| |||||  ||||||||||| ||||||||| ||    
T  18912214 tttatttattaattttgttatgtctgcagcaatttaatctaatttttttccgctcatttactttattaggtttgtaaattatttaacttaacaaatttca 18912313  T
Q  207 tctaaaaaa 215  Q
    |||||||||    
T  18912314 tctaaaaaa 18912322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 30083978 - 30084106
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattt-tttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 207  Q
    |||||||||||||||||||  || |||||||||||| ||||||| ||| ||||| ||||||||||||| ||||| ||||||||||||  | |||||||||    
T  30083978 ttatttattaattttgttaggtccgcagcaatttaatctaatttcttttccgcttatttgctttattaggtttgaaattatttaaccatataaattccat 30084077  T
Q  208 ct-aaaaaatgcatcgcaccaatttcatt 235  Q
    || |||||||||||||||||| |||||||    
T  30084078 ctaaaaaaatgcatcgcaccattttcatt 30084106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 109 - 200
Target Start/End: Original strand, 33375630 - 33375721
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaa 200  Q
    |||||||||||||||||||| |||  ||||||||||||||||||||  |||||||||| |||||||| ||||||||||||||||||||||||    
T  33375630 ttatttattaattttgttacgtctcaagcaatttaacctaatttttctccgctcatttactttattaggtttgcaattatttaacctaacaa 33375721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 235
Target Start/End: Original strand, 24595066 - 24595187
Alignment:
Q  117 taattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaat--tatttaacctaacaaattccatctaa-aa 213  Q
    |||||||||||| ||   |||||||||||||||||||||| |||| | || |||||||| |||||||||  |||||||||||||||||| ||||||| ||    
T  24595066 taattttgttacgtcgatagcaatttaacctaattttttctcgcttacttactttattaggtttgcaattatatttaacctaacaaatttcatctaacaa 24595165  T
Q  214 aatgcatcgcaccaatttcatt 235  Q
    ||||||||||||||||||||||    
T  24595166 aatgcatcgcaccaatttcatt 24595187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 109 - 215
Target Start/End: Complemental strand, 42497217 - 42497111
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  ||| || |||||||||||||||||||| | | |||||||||||||| |||| |||||||||||| ||| ||||||||||    
T  42497217 ttatttattaattttgttagatctacaacaatttaacctaattttttcgctcacatttgctttattaggtttacaattatttaacataataaattccatc 42497118  T
Q  209 taaaaaa 215  Q
    |||||||    
T  42497117 taaaaaa 42497111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 109 - 186
Target Start/End: Complemental strand, 28950093 - 28950016
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaatt 186  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  28950093 ttatttattaattttgttacgtctgcaacaatttaacctaatttttttccgctcatttgctttattaggtttgcaatt 28950016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 141 - 235
Target Start/End: Original strand, 52584966 - 52585061
Alignment:
Q  141 ttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcatt 235  Q
    |||||||||||||||||| || ||||||||||||| ||||| ||||||||||||||||||||| ||||| |||||||| || ||||||||||||||    
T  52584966 ttaacctaattttttcccacttatttgctttattaagtttgtaattatttaacctaacaaatttcatctaaaaaaatgaattgcaccaatttcatt 52585061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 45417655 - 45417579
Alignment:
Q  160 ctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcatt 235  Q
    |||||||||||||||| |||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  45417655 ctcatttgctttattaggtttgcaattatttaacctaacaaattaaatctaaaaaaatgcatcgcaccaatttcatt 45417579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 12115359 - 12115432
Alignment:
Q  163 atttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcatt 235  Q
    ||||||||||||| ||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  12115359 atttgctttattaggtttggaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatttcatt 12115432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 202
Target Start/End: Original strand, 24595255 - 24595321
Alignment:
Q  136 gcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaat 202  Q
    |||||||||| | ||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||    
T  24595255 gcaatttaacttcattttttcctgctcatttgctttattaggtttgcaattatttaacctaaaaaat 24595321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 43761946 - 43762074
Alignment:
Q  109 ttatttattaatttt-gttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 207  Q
    ||||||||||||||| ||||  | | || |||||||||||||| |||||| | ||||||  | ||||| ||| ||| | |||||| |||||||||| |||    
T  43761946 ttatttattaatttttgttaggtttacaacaatttaacctaatattttccggttcattttgtgtattaggttagcagtaatttaatctaacaaatttcat 43762045  T
Q  208 ctaaaaaa-tgcatcgcaccaatttcatt 235  Q
    |||||||| ||||||||||||||||||||    
T  43762046 ctaaaaaagtgcatcgcaccaatttcatt 43762074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 6537536 - 6537465
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgttt 180  Q
    |||||||||||||||||||  |||| | ||||||||| |||||||||||| |||||||||||||||| ||||    
T  6537536 ttatttattaattttgttaggtctgtaacaatttaacttaattttttcccactcatttgctttattaggttt 6537465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 42492335 - 42492280
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcat 164  Q
    |||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||    
T  42492335 ttatttattaattttgttacgtctacagcaatttaacctatttttttcccgctcat 42492280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 155
Target Start/End: Complemental strand, 45417741 - 45417699
Alignment:
Q  113 ttattaattttgttacctctgcagcaatttaacctaatttttt 155  Q
    |||||||||||||||  ||||||||||||||||||||||||||    
T  45417741 ttattaattttgttaggtctgcagcaatttaacctaatttttt 45417699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 47790691 - 47790736
Alignment:
Q  104 catctttatttattaattttgttacctctgcagcaatttaacctaa 149  Q
    |||| |||||||||||||||||||  ||||||||||||||||||||    
T  47790691 catccttatttattaattttgttaggtctgcagcaatttaacctaa 47790736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 47790726 - 47790777
Alignment:
Q  187 atttaacctaacaaattccatctaaaa---aatgcatcgcaccaatttcatt 235  Q
    ||||||||||||||||||| |||||||   ||||||||||||||||||||||    
T  47790726 atttaacctaacaaattccgtctaaaaaaaaatgcatcgcaccaatttcatt 47790777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 48552932 - 48552883
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc 158  Q
    |||||||||||||||||||  ||| |||||| ||||||||||||||||||    
T  48552932 ttatttattaattttgttaagtctacagcaacttaacctaattttttccc 48552883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 48553041 - 48552992
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc 158  Q
    |||||||||||||||||||  | |||||||| ||||||||||||||||||    
T  48553041 ttatttattaattttgttaagtttgcagcaacttaacctaattttttccc 48552992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 14427392 - 14427352
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  14427392 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 14427352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 35003339 - 35003299
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  35003339 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 35003299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 44112722 - 44112682
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  44112722 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 44112682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 48119673 - 48119633
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  48119673 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 48119633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 197
Target Start/End: Complemental strand, 48412031 - 48411972
Alignment:
Q  138 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaa 197  Q
    |||||||||||| ||||||||  |||||||||||||||  |||| |||||||||| ||||    
T  48412031 aatttaacctaaatttttccctttcatttgctttattaaatttgtaattatttaatctaa 48411972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 11928235 - 11928277
Alignment:
Q  187 atttaacctaacaaattccatctaaaaaatgcatcgcaccaattt 231  Q
    |||||||||||||||||||||||  |||||||| |||||||||||    
T  11928235 atttaacctaacaaattccatct--aaaatgcagcgcaccaattt 11928277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 52584880 - 52584930
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgct 161  Q
    |||||||||||||||||||| |  ||||||| ||||||||||||||| |||||    
T  52584880 ttatttattaattttgttacgt--gcagcaacttaacctaatttttttccgct 52584930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 5489821 - 5489781
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  5489821 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 5489781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 38113250 - 38113290
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| |||||||||| |||||||||||||| ||||||    
T  38113250 tgtacaatagggtgtatgattaaagggtgttcatataacat 38113290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 38335963 - 38335923
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||  ||||||||| |||||||||||||||||||||    
T  38335963 tgtacaataaggtgtatgattaaagggtgttcatgtaacat 38335923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 41065198 - 41065158
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||  |||||||||| |||||||||||||||||||||    
T  41065198 tgtacaacagggtgtatgattaaagggtgttcatgtaacat 41065158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 43571141 - 43571181
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||| |||||| || |||||||||||||||||||||    
T  43571141 tgtacaatgaggtgtaggaataaagggtgttcatgtaacat 43571181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 149
Target Start/End: Original strand, 52740915 - 52740955
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaa 149  Q
    |||||||||||||||||||  |||||| |||||||||||||    
T  52740915 ttatttattaattttgttaggtctgcaacaatttaacctaa 52740955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 1e-49; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 28612339 - 28612212
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  | |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28612339 ttatttattaattttgttagttttgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 28612240  T
Q  209 taa-aaaatgcatcgcaccaatttcatt 235  Q
    ||| ||||||||||||||||||||||||    
T  28612239 taaaaaaatgcatcgcaccaatttcatt 28612212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 28611914 - 28611787
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  28611914 ttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgcttgattaggtttgcaattatttaacctaacaagttccatc 28611815  T
Q  209 taa-aaaatgcatcgcaccaatttcatt 235  Q
    ||| |||||||||||||||||| |||||    
T  28611814 taaaaaaatgcatcgcaccaatatcatt 28611787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 41995863 - 41995732
Alignment:
Q  105 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 204  Q
    |||||||||||||||||||||||  |||| | ||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||    
T  41995863 atctttatttattaattttgttatgtctgaaacaatttaacctaattttttcctgttcatttgctttattaggtttgcaattatttaacctaacaaattc 41995764  T
Q  205 catctaaaaa-atgcatcgcaccaatttcatt 235  Q
    |||||||||| ||||||||||| |||||||||    
T  41995763 catctaaaaacatgcatcgcacgaatttcatt 41995732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 44256469 - 44256600
Alignment:
Q  105 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 204  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||| ||| |||||||||||| |||||     
T  44256469 atctttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcattttctttattaggttttcaagtatttaacctaataaattt 44256568  T
Q  205 catct-aaaaaatgcatcgcaccaatttcatt 235  Q
    ||||| ||||||||||||||||||||||||||    
T  44256569 catctaaaaaaatgcatcgcaccaatttcatt 44256600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 6348072 - 6348199
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||| |||||| ||||||||||| ||||||||||||||||  ||||||||| ||||    
T  6348072 ttatttattaattttgttacgtctgcagcaatttaacataattttttctcgctcaattgctttattaggtttgcaattatttaatttaacaaatttcatc 6348171  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||||||||||||||||||||||    
T  6348172 taaaaaaatgcatcgcaccaatttcatt 6348199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 10129603 - 10129476
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  ||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||| |||||| |||    
T  10129603 ttatttattaattttgttaggtctgcagcaatttaacctaatttgttctcgctcatttgctttattaggtttgcaattatttaacctaataaattctatc 10129504  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||| ||||||||||||||||||    
T  10129503 taaaaaaattcatcgcaccaatttcatt 10129476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 104 - 235
Target Start/End: Complemental strand, 37131598 - 37131467
Alignment:
Q  104 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 203  Q
    |||| |||||||||||||||||||  |||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||| |||||||||    
T  37131598 catccttatttattaattttgttagatctgcagcaatttaacctaatttttttccactcatttgctttatta-gtttgcaattatttaacttaacaaatt 37131500  T
Q  204 ccatct-aaaaaatgcatcgcaccaatttcatt 235  Q
     ||||| |||||||||||| |||||||||||||    
T  37131499 tcatctaaaaaaatgcatcacaccaatttcatt 37131467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 5001777 - 5001678
Alignment:
Q  137 caatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaatgcatcgcaccaatttcatt 235  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  5001777 caatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatttcatt 5001678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 11735910 - 11736036
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  | ||||||||||||||||||| ||||||||||||||||||| || | ||||||||||||||||||||||||||| ||||    
T  11735910 ttatttattaattttgttaggt-tgcagcaatttaacctaatattttcccgctcatttgcttcataaggtttgcaattatttaacctaacaaatttcatc 11736008  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||||||||||||| ||||||||    
T  11736009 taaaaaaatgcatcgcaccgatttcatt 11736036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 28612761 - 28612636
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||   ||||| |||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||    
T  28612761 ttatttattaattttgttagg-ctgcaacaatttaacctaatcttttcccgctcatt-gctttattaggtttgcaattatttaacctaacaaatttcatc 28612664  T
Q  209 taa-aaaatgcatcgcaccaatttcatt 235  Q
    ||| ||||||||||||||||||||||||    
T  28612663 taaaaaaatgcatcgcaccaatttcatt 28612636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 28612975 - 28612847
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatg-tttgcaattatttaacctaacaaattccat 207  Q
    |||||||||||||||||||  |||||| |||||||||||||||||||| || ||||||| ||||||| | ||| ||||||||||| ||||||||||||||    
T  28612975 ttatttattaattttgttaggtctgcaacaatttaacctaattttttctcgttcatttgttttattaggtttttcaattatttaatctaacaaattccat 28612876  T
Q  208 ctaaaa-aatgcatcgcaccaatttcatt 235  Q
    |||||| ||||||||||||||||||||||    
T  28612875 ctaaaataatgcatcgcaccaatttcatt 28612847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 29550133 - 29550265
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattat----gtttgcaattatttaacctaacaaattc 204  Q
    ||||||||||||||| |||  |||||| ||||||||||||||||||| |||||||||||||||||||     ||||||||||||||||||||||||||||    
T  29550133 ttatttattaattttattaggtctgcaacaatttaacctaatttttttccgctcatttgctttattagctaggtttgcaattatttaacctaacaaattc 29550232  T
Q  205 catct--aaaaaatgcatcgcaccaatttcatt 235  Q
     ||||  ||||||||||||||||||||||||||    
T  29550233 aatctaaaaaaaatgcatcgcaccaatttcatt 29550265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 133 - 235
Target Start/End: Original strand, 11736325 - 11736428
Alignment:
Q  133 gcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaattt 231  Q
    |||||||||||||||||| ||||||||||||||||||| || | ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  11736325 gcagcaatttaacctaatattttcccgctcatttgcttcataaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaattt 11736424  T
Q  232 catt 235  Q
    ||||    
T  11736425 catt 11736428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 28612127 - 28612000
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| |||    |||    
T  28612127 ttatttattaattttgttaggtctgcaacaatttaacctaattttttccagctcattttctttattaggtttgcaattatttaacctaaaaaaaattatc 28612028  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||||||||||||||||||||||    
T  28612027 taaaaaaatgcatcgcaccaatttcatt 28612000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 112 - 235
Target Start/End: Original strand, 41326372 - 41326496
Alignment:
Q  112 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-a 210  Q
    ||||||||||||||||  |||||| ||||||||| |||||||| |||||||||||| ||||||| ||||||||||||||||||||| ||||   |||| |    
T  41326372 tttattaattttgttaggtctgcaacaatttaacttaatttttccccgctcatttgttttattaagtttgcaattatttaacctaataaatcttatctaa 41326471  T
Q  211 aaaaatgcatcgcaccaatttcatt 235  Q
    |||||||||||||||||||||||||    
T  41326472 aaaaatgcatcgcaccaatttcatt 41326496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 109 - 213
Target Start/End: Complemental strand, 44543821 - 44543717
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| || ||| |||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||| |||||| |||    
T  44543821 ttatttattaattttgttacgtccgcaacaatttaacctaatttttccccgctcatttgctttatttggtttgcaattatttaacctaaaaaattctatc 44543722  T
Q  209 taaaa 213  Q
    |||||    
T  44543721 taaaa 44543717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 109 - 200
Target Start/End: Original strand, 627537 - 627628
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaa 200  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  627537 ttatttattaattttgttacgtttgcagcaatttaacctaattttttcccgctcatttactttattacatttgcaattatttaacctaacaa 627628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 3249905 - 3249778
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||||| |||||||||||||| |||| ||||| ||||||| ||||| ||| ||| | ||||||||||||||||| ||||    
T  3249905 ttatttattaattttgttagatctgcaacaatttaacctaatatttttccgcttatttgctgtattaggttagcagtaatttaacctaacaaatttcatc 3249806  T
Q  209 taa-aaaatgcatcgcaccaatttcatt 235  Q
    ||| ||||||||||||||||||||||||    
T  3249805 taaaaaaatgcatcgcaccaatttcatt 3249778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 109 - 231
Target Start/End: Complemental strand, 5001627 - 5001504
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||| || ||||||||||||||| |||  || ||||||||||||| ||||| ||||    
T  5001627 ttatttattaattttgttaggtctgcagcaatttaaactaattttttctcgttcatttgctttattaggttaacagttatttaacctaaaaaatttcatc 5001528  T
Q  209 taa-aaaatgcatcgcaccaattt 231  Q
    ||| ||||||||||||||||||||    
T  5001527 taaaaaaatgcatcgcaccaattt 5001504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 28612551 - 28612425
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||   ||||| ||||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||||||| |||||  |||    
T  28612551 ttatttattaattttgttagg-ctgcaacaatttaacctaattttttccagctcattttctttattaggtttgcaattacttaacctaaaaaattttatc 28612453  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||||||||||||||||||||||    
T  28612452 taaaaaaatgcatcgcaccaatttcatt 28612425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 109 - 215
Target Start/End: Original strand, 12898023 - 12898129
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||||||||||||||||| || |||| |||||||||| |||| ||| |||||||||||||||| |||||||||||||||    
T  12898023 ttatttattaattttgttagatctgcagcaatttaacctgatatttttccgctcatttactttgttaggtttgcaattatttaatctaacaaattccatc 12898122  T
Q  209 taaaaaa 215  Q
    |||||||    
T  12898123 taaaaaa 12898129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 110 - 203
Target Start/End: Complemental strand, 5013301 - 5013208
Alignment:
Q  110 tatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 203  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||  |||||||||    
T  5013301 tatttattaattttgttacgtctgcagcaatttaacctaaatttttcccgctcatttgctttattaggtttacaattatttaatttaacaaatt 5013208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 111 - 235
Target Start/End: Original strand, 29549960 - 29550085
Alignment:
Q  111 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct- 209  Q
    |||||||||||||||||  ||||||  ||||||||||||||||||| || ||||||||||||||| |||||  ||||||||||||||||||||| || |     
T  29549960 atttattaattttgttaggtctgcactaatttaacctaattttttctcgttcatttgctttattaggtttgttattatttaacctaacaaattctattta 29550059  T
Q  210 aaaaaatgcatcgcaccaatttcatt 235  Q
    ||||||||||||||||| ||||||||    
T  29550060 aaaaaatgcatcgcaccgatttcatt 29550085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 109 - 213
Target Start/End: Complemental strand, 44544032 - 44543928
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| || ||| ||||||||| |||||||||||| ||||||||| |||||| ||||| ||||||||||||||| ||||||||||    
T  44544032 ttatttattaattttgttacgtccgcaacaatttaacataattttttcccactcatttgcattattaagtttgtaattatttaacctaataaattccatc 44543933  T
Q  209 taaaa 213  Q
    |||||    
T  44543932 taaaa 44543928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 3249688 - 3249561
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  ||||||||||||||| ||||| |||||||||||||||||| ||||| |||  || | |||||||||||||| || ||||    
T  3249688 ttatttattaattttgttaggtctgcagcaatttaagctaatattttcccgctcatttgctatattaggttaacagtaatttaacctaacaattttcatc 3249589  T
Q  209 taa-aaaatgcatcgcaccaatttcatt 235  Q
    ||| ||||| ||||||||||||||||||    
T  3249588 taaaaaaatacatcgcaccaatttcatt 3249561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 147 - 235
Target Start/End: Complemental strand, 5001442 - 5001353
Alignment:
Q  147 taattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaatgcatcgcaccaatttcatt 235  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||    
T  5001442 taattttttctcgctcatttgctttattaggtttgcaattatttaacctaaaaagttccatctaaaaaaatgcatcgcaccaatttcatt 5001353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 147 - 235
Target Start/End: Complemental strand, 5013112 - 5013023
Alignment:
Q  147 taattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaatgcatcgcaccaatttcatt 235  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||    
T  5013112 taattttttctcgctcatttgctttattaggtttgcaattatttaacctaaaaagttccatctaaaaaaatgcatcgcaccaatttcatt 5013023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 29549791 - 29549918
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||| ||||||||||  ||| || | ||||||| || |||||| ||||||||||||||||||| |||| |||||||||||||||| ||||| ||||    
T  29549791 ttatttatgaattttgttaggtctacaaccatttaacttattttttttccgctcatttgctttattaggtttacaattatttaacctaataaatttcatc 29549890  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | |||||||||| |||||||||||||||    
T  29549891 taaaaaaatgcaccgcaccaatttcatt 29549918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 131 - 235
Target Start/End: Original strand, 11657474 - 11657575
Alignment:
Q  131 ctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaat 229  Q
    |||||||| ||||||||||||||||| || |||||||||   ||| |||||||||||||||| |||||||||| ||||| ||||||||||||||||||||    
T  11657474 ctgcagcattttaacctaattttttctcgttcatttgct---ttaggtttgcaattatttaa-ctaacaaatttcatctaaaaaaatgcatcgcaccaat 11657569  T
Q  230 ttcatt 235  Q
    ||||||    
T  11657570 ttcatt 11657575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 109 - 231
Target Start/End: Complemental strand, 12896532 - 12896407
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat- 207  Q
    |||||||||||||||||||  ||| || ||||||||| |||| |||| ||||||||||| ||||||| |||||||||||||||| |||| |||||||||     
T  12896532 ttatttattaattttgttatgtctacaacaatttaacttaatctttttccgctcatttgttttattaggtttgcaattatttaatctaataaattccata 12896433  T
Q  208 --ctaaaaaatgcatcgcaccaattt 231  Q
        |||||||||||||||| |||||    
T  12896432 aaaaaaaaaatgcatcgcactaattt 12896407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 627629 - 627703
Alignment:
Q  162 catttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcatt 235  Q
    ||||| |||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  627629 catttactttattacgtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatttcatt 627703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 151 - 235
Target Start/End: Original strand, 6347935 - 6348019
Alignment:
Q  151 tttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaa-tgcatcgcaccaatttcatt 235  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||| |  |||||||||||||||||    
T  6347935 tttttcccgctcatttgctttatta-gtttacaattatttaacctaacaaatttcatctaaaaaattatatcgcaccaatttcatt 6348019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 20708899 - 20708963
Alignment:
Q  172 attatgtttgcaattatttaacctaacaaattccatctaaa-aaatgcatcgcaccaatttcatt 235  Q
    |||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  20708899 attaagtttgcaattatttaacctaacaaatttcatctaaataaatgcatcgcaccaatttcatt 20708963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 130 - 216
Target Start/End: Original strand, 19640327 - 19640414
Alignment:
Q  130 tctgcagcaatttaacctaattttttcc-cgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaat 216  Q
    ||||||||||||||| ||||||||||   || ||||||  ||||||  ||||||||||||||||||||| ||||||||||||||||||    
T  19640327 tctgcagcaatttaatctaatttttttttcgttcatttattttattgggtttgcaattatttaacctaataaattccatctaaaaaat 19640414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 130 - 216
Target Start/End: Original strand, 19838920 - 19839007
Alignment:
Q  130 tctgcagcaatttaacctaattttttcc-cgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaat 216  Q
    ||||||||||||||| ||||||||||   || ||||||  ||||||  ||||||||||||||||||||| ||||||||||||||||||    
T  19838920 tctgcagcaatttaatctaatttttttttcgttcatttattttattgggtttgcaattatttaacctaataaattccatctaaaaaat 19839007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 44543714 - 44543661
Alignment:
Q  183 aattatttaacctaacaaattccatctaaaa-aatgcatcgcaccaatttcatt 235  Q
    ||||||||||||||||||||| ||||||||| |||||||| |||||||||||||    
T  44543714 aattatttaacctaacaaatttcatctaaaagaatgcatcacaccaatttcatt 44543661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 2132309 - 2132238
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgttt 180  Q
    ||||||||||| |||||||  |||||| ||||||||||||||||||  | ||||||||||||| ||| ||||    
T  2132309 ttatttattaagtttgttaggtctgcaacaatttaacctaatttttctctgctcatttgcttttttaggttt 2132238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 966889 - 966929
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  966889 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 966929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 1750459 - 1750419
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  1750459 tgtacaatggggtgtaggaataaagggtgttcatgtaacat 1750419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 11825709 - 11825749
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  11825709 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 11825749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 16804013 - 16803973
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  16804013 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 16803973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 16843295 - 16843255
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  16843295 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 16843255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 18491750 - 18491710
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  18491750 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 18491710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 41282029 - 41282069
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  41282029 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 41282069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 43114602 - 43114562
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  43114602 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 43114562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 231
Target Start/End: Complemental strand, 17930585 - 17930465
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    ||||||||||||||| |||  |||||| ||| ||||||||||  || |||  | |  ||||  |||| |||||||   ||||||||||||||||||||||    
T  17930585 ttatttattaattttattaggtctgcaacaacttaacctaataattcccctttaaaatgctgaattaggtttgcagcaatttaacctaacaaattccatc 17930486  T
Q  209 taaaaaatgcatcgcaccaattt 231  Q
    |  |||||||| |||||||||||    
T  17930485 t--aaaatgcaacgcaccaattt 17930465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Complemental strand, 7070459 - 7070421
Alignment:
Q  68 tacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  7070459 tacaatgggatgtatgaataaagggtgttcatgtaacat 7070421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 231
Target Start/End: Complemental strand, 15256590 - 15256548
Alignment:
Q  187 atttaacctaacaaattccatctaaaaaatgcatcgcaccaattt 231  Q
    |||||||||||||||||||||||  |||||||| |||||||||||    
T  15256590 atttaacctaacaaattccatct--aaaatgcaacgcaccaattt 15256548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 17370109 - 17370150
Alignment:
Q  140 tttaacctaattttttcccgctcatttgctttattatgtttg 181  Q
    |||||||||||||| ||||||||||||| ||||||| |||||    
T  17370109 tttaacctaattttctcccgctcatttgttttattaggtttg 17370150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 20641700 - 20641641
Alignment:
Q  109 ttatttattaattttgttacc---tctgcagcaatttaacctaattttttcccgctcatt 165  Q
    |||||||||||||||||||     |||||| ||| |||||||||||||||||||||||||    
T  20641700 ttatttattaattttgttattaggtctgcaacaagttaacctaattttttcccgctcatt 20641641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 4299475 - 4299515
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| |||||||||| |||||||||||||| ||||||    
T  4299475 tgtacaatagggtgtatgattaaagggtgttcatataacat 4299515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 12302308 - 12302348
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||||||||||  | |||||||||||||||||||||    
T  12302308 tgtacaatggggtgtagaaataaagggtgttcatgtaacat 12302348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 12415515 - 12415555
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||  ||||||||| |||||||||||||||||||||    
T  12415515 tgtacaataaggtgtatgattaaagggtgttcatgtaacat 12415555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 12427575 - 12427615
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||  ||||||||| |||||||||||||||||||||    
T  12427575 tgtacaataaggtgtatgattaaagggtgttcatgtaacat 12427615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 16096792 - 16096752
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||| ||||||||||| || |||||||||||||||||||||    
T  16096792 tgtataatggggtgtaggaataaagggtgttcatgtaacat 16096752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 34817831 - 34817871
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||| ||||| ||| |||||||||||||||||||||    
T  34817831 tgtacaatgaggtgtgtgaataaagggtgttcatgtaacat 34817871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 43490456 - 43490496
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  43490456 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 43490496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 5e-49; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 1197878 - 1198004
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||    
T  1197878 ttatttattaattttgttaggtctgcagcaatttaacctaatcttttcccgctcatttgctttattagggttgcaattatttaacctaacaaatttcatc 1197977  T
Q  209 taaaaaatgcatcgcaccaatttcatt 235  Q
    |||||||||||||||| ||||||||||    
T  1197978 taaaaaatgcatcgcatcaatttcatt 1198004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 112 - 235
Target Start/End: Complemental strand, 27853773 - 27853649
Alignment:
Q  112 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa 211  Q
    ||||||||||||||||  |||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  27853773 tttattaattttgttatgtctgtagcaatttaacctaattttttcccgctcatttactttattaggtttgcaattatttaacctaacaaattccatctaa 27853674  T
Q  212 -aaaatgcatcgcaccaatttcatt 235  Q
     ||||||||||||||||||||||||    
T  27853673 aaaaatgcatcgcaccaatttcatt 27853649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 109 - 215
Target Start/End: Complemental strand, 23828233 - 23828127
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23828233 ttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 23828134  T
Q  209 taaaaaa 215  Q
    |||||||    
T  23828133 taaaaaa 23828127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 107 - 235
Target Start/End: Complemental strand, 23838451 - 23838322
Alignment:
Q  107 ctttatttattaattttgttacctctgcagcaatttaacct-aattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattcc 205  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |    
T  23838451 ctttatttattaattttgttaggtctgcagcaatttaaccttaattttttcccgctcatttgctttattagttttgcaattatttaacctaacaaattgc 23838352  T
Q  206 atctaaaaaatgcatcgcaccaatttcatt 235  Q
    |||||||||| ||||| |||||||||||||    
T  23838351 atctaaaaaaagcatctcaccaatttcatt 23838322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 3459241 - 3459114
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    ||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||    
T  3459241 ttatttactaattttgttacgtctgcagcaatttaacataattttttcccgctcatttgctttattaggtttgcaattatttaatctaacaaatttcatc 3459142  T
Q  209 taa-aaaatgcatcgcaccaatttcatt 235  Q
    ||| ||||||||||||| ||||||||||    
T  3459141 taaaaaaatgcatcgcatcaatttcatt 3459114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 104 - 235
Target Start/End: Original strand, 23085855 - 23085988
Alignment:
Q  104 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 203  Q
    |||| |||||||||||||||||||  |||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||    
T  23085855 catcattatttattaattttgttaggtctgcaacaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaataaatt 23085954  T
Q  204 ccatct--aaaaaatgcatcgcaccaatttcatt 235  Q
    ||||||  ||||||| ||||||||||||||||||    
T  23085955 ccatctaaaaaaaatacatcgcaccaatttcatt 23085988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 29580144 - 29580018
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||| ||| ||||    
T  29580144 ttatttattaattttgttacgtatgcatcaatttaacctaattttttcccgctcatttgttttattaggtttgcaattatttaaactaacacatttcatc 29580045  T
Q  209 taaaaaatgcatcgcaccaatttcatt 235  Q
    |||||| ||||||||||||||||||||    
T  29580044 taaaaattgcatcgcaccaatttcatt 29580018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 32062815 - 32062945
Alignment:
Q  109 ttatttattaattttgttacct--ctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattcca 206  Q
    |||||||||||||||||||| |  |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  32062815 ttatttattaattttgttacgttgctgcagcaatttaaactaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttca 32062914  T
Q  207 tct--aaaaaatgcatcgcaccaatttcatt 235  Q
    |||  ||||||||||| ||||||||||||||    
T  32062915 tctaaaaaaaatgcattgcaccaatttcatt 32062945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 23960909 - 23960779
Alignment:
Q  105 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 204  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||| ||||| ||||||||||||||||||||||    
T  23960909 atctttatttaataattttgttacgtctgcagcaatttaacctaattttttcca-ctcatttgctttattaggtttgtaattatttaacctaacaaattc 23960811  T
Q  205 catctaaaaaatg-catcgcaccaatttcatt 235  Q
    ||||||||||| | ||||||| ||||||||||    
T  23960810 catctaaaaaaagacatcgcatcaatttcatt 23960779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 37198404 - 37198277
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||  |||| ||||| |||||||||||||||||||||    
T  37198404 ttatttattaattttgttacgtctgcaacaatttaacctaatttttttccgctcatttgctttattcggttttcaattgtttaacctaacaaattccatc 37198305  T
Q  209 taa-aaaatgcatcgcaccaatttcatt 235  Q
    ||| ||||||||| ||||||||||||||    
T  37198304 taaaaaaatgcattgcaccaatttcatt 37198277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 37410178 - 37410051
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    ||||||||||||||| |||| | |||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  37410178 ttatttattaattttattacgtttgcagcaatttaacttaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 37410079  T
Q  209 taaaaa-atgcatcgcaccaatttcatt 235  Q
    |||||| ||||||||||| |||||||||    
T  37410078 taaaaagatgcatcgcacaaatttcatt 37410051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 33198833 - 33198959
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||| ||||||||||||| ||||| |||  || | ||||||||||||||||||||||    
T  33198833 ttatttattaattttgttaggtctgcagcaatttaacctaatatttttccgctcatttgctgtattaggttaacagtgatttaacctaacaaattccatc 33198932  T
Q  209 taaaaaatgcatcgcaccaatttcatt 235  Q
    |||||||||||||||||||||||||||    
T  33198933 taaaaaatgcatcgcaccaatttcatt 33198959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 35617681 - 35617810
Alignment:
Q  109 ttatttattaattttgttacctctgca-gcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 207  Q
    |||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||    
T  35617681 ttatttattaattttgttacgtctgcaagcaatttaacttaattttttcccgctcatttgttttattaggtttgcaattatttaacctaacaaattctat 35617780  T
Q  208 ct--aaaaaatgcatcgcaccaatttcatt 235  Q
    ||  |||||||||||||||| |||||||||    
T  35617781 ctaaaaaaaatgcatcgcactaatttcatt 35617810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 111 - 231
Target Start/End: Complemental strand, 39922192 - 39922071
Alignment:
Q  111 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatcta 210  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  39922192 atttattaactttgttacgtctgcagcaatttaacttaattttttcccgctcatttgttttattaggtttgcaattatttaacctaacaaattccatcta 39922093  T
Q  211 a-aaaatgcatcgcaccaattt 231  Q
    | |||||| || ||||||||||    
T  39922092 aaaaaatgtattgcaccaattt 39922071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 104 - 235
Target Start/End: Complemental strand, 40399605 - 40399473
Alignment:
Q  104 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 203  Q
    |||| |||| |||||||||| |||  | || ||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||    
T  40399605 catccttatgtattaatttttttatgtatgtagcaatttaacctaattttttcccgctcatttgttttattaggtttgtaattatttaacctaacaaatt 40399506  T
Q  204 ccatctaa-aaaatgcatcgcaccaatttcatt 235  Q
    |||||||| ||||||||||||||||||||||||    
T  40399505 ccatctaaaaaaatgcatcgcaccaatttcatt 40399473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 38111372 - 38111471
Alignment:
Q  137 caatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcatt 235  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  38111372 caatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacccaacaaattccatctgaaaaaatgcatcgcaccaatttcatt 38111471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 109 - 215
Target Start/End: Complemental strand, 23831051 - 23830945
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  | ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  23831051 ttatttattaattttgttaggtgtgcagaaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattgcatc 23830952  T
Q  209 taaaaaa 215  Q
    |||||||    
T  23830951 taaaaaa 23830945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 44429050 - 44429176
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  ||| || ||| |||||||||| ||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||||    
T  44429050 ttatttattaattttgttaggtctccaacaacttaacctaatattttccctctcatttgctttattaggtaagcaataatttaacctaacaaattccatc 44429149  T
Q  209 taaaaaatgcatcgcaccaatttcatt 235  Q
    |||||||||||||||||||||||||||    
T  44429150 taaaaaatgcatcgcaccaatttcatt 44429176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 23960687 - 23960561
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||||| | ||||||| ||||||||| |||| |||||||||||||||||||||| ||||    
T  23960687 ttatttattaattttgttacgtctgcaacaatttaacttaatttttttctgctcatt-gctttattaggtttacaattatttaacctaacaaatttcatc 23960589  T
Q  209 taa-aaaatgcatcgcaccaatttcatt 235  Q
    ||| ||||||||||||||||||||||||    
T  23960588 taaaaaaatgcatcgcaccaatttcatt 23960561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 34947504 - 34947602
Alignment:
Q  137 caatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcatt 235  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  34947504 caatttaacctaatttttttccgctcatttgctttattaggtttgaaattatttaacctaacaaatttcatctaaaaaatgcatcgcacaaatttcatt 34947602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 109 - 231
Target Start/End: Complemental strand, 30439151 - 30439026
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttc---ccgctcatttgctttattatgtttgcaattatttaacctaacaaattcc 205  Q
    |||||||||||||||||||  |||||| |||||||| ||||||||||    | | ||||||||||||||| ||||||||||||||||||||||||||| |    
T  30439151 ttatttattaattttgttaggtctgcaacaatttaatctaattttttttttctgttcatttgctttattaggtttgcaattatttaacctaacaaatttc 30439052  T
Q  206 atctaaaaaatgcatcgcaccaattt 231  Q
    ||||||||||||||||||||||||||    
T  30439051 atctaaaaaatgcatcgcaccaattt 30439026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 37198018 - 37197885
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattat--------gtttgcaattatttaacctaacaa 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||  |||||||||| ||||||||         ||||||||||||||||||||||||    
T  37198018 ttatttattaattttgttacgtctgcagcaatttaacctaattttt--ccgctcattttctttattaatttattaggtttgcaattatttaacctaacaa 37197921  T
Q  201 attccatctaa-aaaatgcatcgcaccaatttcatt 235  Q
    ||||||||||| ||||||||||||||||||||||||    
T  37197920 attccatctaaaaaaatgcatcgcaccaatttcatt 37197885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 109 - 215
Target Start/End: Complemental strand, 37198220 - 37198113
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttc-ccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 207  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||| |||||| ||    
T  37198220 ttattttttaattttgttacgtctgcagcaatttaacctaattttttttccgctcatttgctttattaggtttgcaattatttaacctaataaattctat 37198121  T
Q  208 ctaaaaaa 215  Q
    ||||||||    
T  37198120 ctaaaaaa 37198113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 109 - 231
Target Start/End: Complemental strand, 37197783 - 37197662
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||  | |  ||||||||||||||||||||| ||||    
T  37197783 ttatttattaattttgttacctctgcagcaatttaacctaa--ttttcctgctcatttgctttattaaatataaaattatttaacctaacaaatttcatc 37197686  T
Q  209 t-aaaaaatgcatcgcaccaattt 231  Q
    | ||||||||||| ||||||||||    
T  37197685 taaaaaaatgcatggcaccaattt 37197662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 13797442 - 13797569
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  | |||| ||| |||||||| |||||||| ||||||||||||||||| ||||||||||||||||| |||||||||| ||     
T  13797442 ttatttattaattttgttaggtttgcatcaacttaacctagttttttcctgctcatttgctttattaggtttgcaattatttaacttaacaaattcaatt 13797541  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | |||||||| || ||||||||||||||    
T  13797542 taaaaaaatgtatggcaccaatttcatt 13797569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 105 - 215
Target Start/End: Original strand, 37426112 - 37426222
Alignment:
Q  105 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 204  Q
    |||||||||||||||||||||||| | |||||||| |||  |||||||||| | |||||||| |||||||| |||||||||| |||||| ||||||||||    
T  37426112 atctttatttattaattttgttacgtttgcagcaagttagtctaatttttttcagctcatttactttattaggtttgcaattgtttaacataacaaattc 37426211  T
Q  205 catctaaaaaa 215  Q
    |||||||||||    
T  37426212 catctaaaaaa 37426222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 2084876 - 2085004
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  | |||||||| |||| ||||| ||||||| |||||||||| ||||| ||| | | | ||||||||||||||||||||||    
T  2084876 ttatttattaattttgttaggtttgcagcaacttaatctaatattttccctctcatttgctgtattaggttagtagtaatttaacctaacaaattccatc 2084975  T
Q  209 ta--aaaaatgcatcgcaccaatttcatt 235  Q
    ||  |||||||||||||||||||||||||    
T  2084976 taagaaaaatgcatcgcaccaatttcatt 2085004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 44433629 - 44433756
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||| ||||||||||  |||||||||| || || |||| ||||||| | |||||||| ||||||||| ||| | ||||||||||||||||| ||||    
T  44433629 ttatttatcaattttgttaggtctgcagcaacttcacttaatattttccctcccatttgctgtattatgttagcagtaatttaacctaacaaatttcatc 44433728  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||||||||||||||||||||||    
T  44433729 taaaaaaatgcatcgcaccaatttcatt 44433756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 44429894 - 44430021
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||| ||||||||||  |||||||||| || || |||| ||||||| | |||||| | ||||||||| ||| | ||||||||||||||||| ||||    
T  44429894 ttatttatcaattttgttaggtctgcagcaacttcacttaatattttccctcccatttgttgtattatgttagcagtaatttaacctaacaaatttcatc 44429993  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||||||||||||||||||||||    
T  44429994 taaaaaaatgcatcgcaccaatttcatt 44430021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 117 - 235
Target Start/End: Original strand, 42045644 - 42045764
Alignment:
Q  117 taattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttatta--tgtttgcaattatttaacctaacaaattccatct-aaaa 213  Q
    |||||||||||| ||||||||||||||||||||||||||   |||||||| |||| |||   ||||||||||||||||||||||||||| ||||| ||||    
T  42045644 taattttgttacgtctgcagcaatttaacctaatttttt-ttgctcatttactttgttaagagtttgcaattatttaacctaacaaatttcatctaaaaa 42045742  T
Q  214 aatgcatcgcaccaatttcatt 235  Q
    |||||||| || ||||||||||    
T  42045743 aatgcatcacatcaatttcatt 42045764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 117 - 202
Target Start/End: Complemental strand, 18308343 - 18308258
Alignment:
Q  117 taattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaat 202  Q
    |||||||||||| ||||||  || |||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||    
T  18308343 taattttgttacatctgcaataacttaacctaattttttcccactcatttgctttattaggttcgcaattatttaacctaacaaat 18308258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 103 - 213
Target Start/End: Complemental strand, 43419138 - 43419032
Alignment:
Q  103 acatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaat 202  Q
    ||||| |||||||||||||||||||| |||||| ||| |||| |||| ||||||||||||||||||||||||| ||||   | |||||||||||||||||    
T  43419138 acatccttatttattaattttgttacatctgcatcaacttaatctaa-tttttcccgctcatttgctttattaggttt---actatttaacctaacaaat 43419043  T
Q  203 tccatctaaaa 213  Q
    | |||||||||    
T  43419042 ttcatctaaaa 43419032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 175
Target Start/End: Complemental strand, 23838242 - 23838176
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttatta 175  Q
    |||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  23838242 ttatttattaattttgttaggtctgcaacaatttaacctaattttttcccgctcatttgctttatta 23838176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 33198603 - 33198728
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  || |||| ||||||||||||||||||    |||||||||| ||||| ||| ||| | ||||||||||||||||| ||||    
T  33198603 ttatttattaattttgttaggtcagcagtaatttaacctaatttttt--tactcatttgctgtattaggttagcactaatttaacctaacaaatttcatc 33198700  T
Q  209 taaaa-aatgcatcgcaccaatttcatt 235  Q
    ||||| |||||||||| | |||||||||    
T  33198701 taaaacaatgcatcgcgcaaatttcatt 33198728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 44430067 - 44430195
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac-aaattccat 207  Q
    |||||||||||||||||||  |||||| ||| ||||| |||| ||||||| | |||||||||||||| ||  ||| | |||||||| ||| |||||||||    
T  44430067 ttatttattaattttgttaggtctgcaacaacttaacgtaatattttccctcccatttgctttattaggtaagcattaatttaacccaacaaaattccat 44430166  T
Q  208 c-taaaaaatgcatcgcaccaatttcatt 235  Q
    | | |||||||| ||||||||||||||||    
T  44430167 ctttaaaaatgcttcgcaccaatttcatt 44430195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 44430418 - 44430546
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac-aaattccat 207  Q
    |||||||||||||||||||  |||||||||| |||||||| | ||||||| |||||||||||||| | ||  ||| | |||||||| ||| ||||| |||    
T  44430418 ttatttattaattttgttagatctgcagcaacttaacctactattttccctctcatttgctttatcaggtaagcagtaatttaacccaacaaaatttcat 44430517  T
Q  208 c-taaaaaatgcatcgcaccaatttcatt 235  Q
    | | |||||||| ||||||||||||||||    
T  44430518 cttgaaaaatgcttcgcaccaatttcatt 44430546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 44433802 - 44433930
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac-aaattccat 207  Q
    |||||||||||||||||||  |||||| ||| ||||| |||| ||||||| | |||||||||||||| ||  ||| | |||||||| ||| |||||||||    
T  44433802 ttatttattaattttgttaggtctgcaacaacttaacgtaatattttccctcccatttgctttattaggtaagcattaatttaacccaacaaaattccat 44433901  T
Q  208 c-taaaaaatgcatcgcaccaatttcatt 235  Q
    | | |||||||| ||||||||||||||||    
T  44433902 ctttaaaaatgcttcgcaccaatttcatt 44433930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 604781 - 604655
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||||||||| |||| | ||| ||| ||  || ||||||||||||| ||  ||| | ||||||||||||||||| ||||    
T  604781 ttatttattaattttgttaggtctgcagcaacttaatcgaatatttccctcct-atttgctttattaggtaagcagtaatttaacctaacaaatttcatc 604683  T
Q  209 taa-aaaatgcatcgcaccaatttcatt 235  Q
    ||| ||||||||||||| ||||||||||    
T  604682 taaaaaaatgcatcgcaacaatttcatt 604655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 44014524 - 44014571
Alignment:
Q  188 tttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcatt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44014524 tttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcatt 44014571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 231
Target Start/End: Complemental strand, 604606 - 604485
Alignment:
Q  112 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctc-atttgctttattatgtttgcaattatttaacctaacaaattccatcta 210  Q
    ||||||||||||||||  |||| ||||| |||||||||| ||||||| ||| ||||||| ||||| ||| ||| | ||||||| ||||||||| ||||||    
T  604606 tttattaattttgttagatctgtagcaacttaacctaatattttccctctctatttgctgtattaggttagcagtaatttaacataacaaatttcatcta 604507  T
Q  211 aaa-aatgcatcgcaccaattt 231  Q
    ||| || ||||| |||||||||    
T  604506 aaacaaagcatcacaccaattt 604485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 1276574 - 1276502
Alignment:
Q  164 tttgctttattatgtttgcaattatttaacctaacaaattccatctaaaa-aatgcatcgcaccaatttcatt 235  Q
    |||||||||||| |||||||||||||||||||||||||||  |||||||| ||| ||| ||||||||||||||    
T  1276574 tttgctttattaggtttgcaattatttaacctaacaaattgtatctaaaataattcattgcaccaatttcatt 1276502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 3990184 - 3990272
Alignment:
Q  148 aattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcatt 235  Q
    |||||||||||||||||||  ||  ||| ||||||||||||||||||||| ||||| ||||| |||||||| || ||||||||||||||    
T  3990184 aattttttcccgctcatttatttgtttaggtttgcaattatttaacctaataaattacatctaaaaaaatgaattgcaccaatttcatt 3990272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 39922016 - 39921960
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatt 165  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||    
T  39922016 ttatttattaattttgttacgtctgcaacaatttaacctaattttttcctgctcatt 39921960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 44429224 - 44429352
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac-aaattccat 207  Q
    |||||||||||||||||||  |||||| ||| |||||||||| |||| || |||||||||||||||| ||  ||| | |||||||| ||| ||||| |||    
T  44429224 ttatttattaattttgttaggtctgcaacaacttaacctaatatttttcctctcatttgctttattaggtaagcagtaatttaacccaacaaaatttcat 44429323  T
Q  208 c-taaaaaatgcatcgcaccaatttcatt 235  Q
    | | |||||||| ||||| ||||||||||    
T  44429324 cttgaaaaatgcttcgcatcaatttcatt 44429352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 44433976 - 44434104
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac-aaattccat 207  Q
    |||||||||||||||||||  |||||| ||| ||||||||||  |||||| | |||||||||||||| ||  ||| | |||||||| ||| ||||| |||    
T  44433976 ttatttattaattttgttaggtctgcaacaacttaacctaatactttccctcccatttgctttattaggtaagcagtaatttaacccaacaaaatttcat 44434075  T
Q  208 c-taaaaaatgcatcgcaccaatttcatt 235  Q
    | | |||||||| ||||||||||||||||    
T  44434076 cttgaaaaatgcttcgcaccaatttcatt 44434104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 37197834 - 37197788
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaatttttt 155  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  37197834 ttatttattaattttgttacgtctgcagcaatttaacctaatttttt 37197788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 44430241 - 44430369
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac-aaattccat 207  Q
    |||||||||||||||||||  |||||| ||| |||||||||| |||| || | ||||| |||||||| ||  ||| | |||||||| ||| ||||| |||    
T  44430241 ttatttattaattttgttaggtctgcaacaacttaacctaatatttttcctcccatttactttattaggtaagcagtaatttaacccaacaaaatttcat 44430340  T
Q  208 c-taaaaaatgcatcgcaccaatttcatt 235  Q
    | | |||||||| ||||||||||||||||    
T  44430341 cttgaaaaatgcttcgcaccaatttcatt 44430369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 34345139 - 34345193
Alignment:
Q  104 catctttatttattaattttgttacctctgcagcaatttaacctaattttttccc 158  Q
    |||| ||||||||||||||| |||  |||||||||||||||||||||||||||||    
T  34345139 catccttatttattaattttattaggtctgcagcaatttaacctaattttttccc 34345193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 39922272 - 39922226
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaatttttt 155  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  39922272 ttatttattaattttgttacgtcttcagcaatttaacctaatttttt 39922226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 167
Target Start/End: Original strand, 44434153 - 44434211
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttg 167  Q
    |||||||||||||||||||  |||||||||| |||||||||| ||||||| ||||||||    
T  44434153 ttatttattaattttgttagatctgcagcaacttaacctaatattttccctctcatttg 44434211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 38111190 - 38111248
Alignment:
Q  178 tttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcatt 235  Q
    ||||||||| |||||||||||||| ||||||| |||||||| ||||| |||||||||||    
T  38111190 tttgcaattgtttaacctaacaaaatccatctaaaaaaatgtatcgcgccaatttcatt 38111248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 604875 - 604826
Alignment:
Q  187 atttaacctaacaaattccatctaa-aaaatgcatcgcaccaatttcatt 235  Q
    ||||||||||||||||| ||||||| |||||||||||||| |||||||||    
T  604875 atttaacctaacaaatttcatctaaaaaaatgcatcgcacaaatttcatt 604826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 30912617 - 30912657
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  30912617 tgtacaatggggtgtaggaataaagggtgttcatgtaacat 30912657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 35181561 - 35181521
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  35181561 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 35181521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 42699302 - 42699262
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  42699302 tgtacaatggggtgtaggaataaagggtgttcatgtaacat 42699262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 198
Target Start/End: Complemental strand, 604434 - 604344
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctc-atttgctttattatgtttgcaattatttaacctaac 198  Q
    |||||||||||||||||||  |||| ||||| |||||||||| ||||||| ||| ||||| | ||||| |||  || | ||||||||||||    
T  604434 ttatttattaattttgttagatctgtagcaacttaacctaatattttccctctctatttgttgtattaggttaacagtaatttaacctaac 604344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 605020 - 604972
Alignment:
Q  188 tttaacctaacaaattccatctaaaaaa-tgcatcgcaccaatttcatt 235  Q
    |||||||||| |||||| |||||||||| || |||||||||||||||||    
T  605020 tttaacctaataaattcaatctaaaaaaatgtatcgcaccaatttcatt 604972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 11582811 - 11582771
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  11582811 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 11582771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 20148805 - 20148765
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||||| ||||||| ||||||||||| |||||||||    
T  20148805 tgtacaatgggatgtatgaataaagggtgtttatgtaacat 20148765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 29705407 - 29705367
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||||||||||  | |||||||||||||||||||||    
T  29705407 tgtacaatggggtgtagaaataaagggtgttcatgtaacat 29705367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 33630048 - 33630088
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||| ||||||||| |||||||||||| ||||||||    
T  33630048 tgtacaatgaggtgtatgattaaagggtgttcgtgtaacat 33630088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 34304833 - 34304793
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| |||||||||| |||||| ||||||||||||||    
T  34304833 tgtacaatagggtgtatgattaaaggatgttcatgtaacat 34304793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 36743538 - 36743578
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  36743538 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 36743578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 42295240 - 42295200
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||| |||||| || |||||||||||||||||||||    
T  42295240 tgtacaatgaggtgtaggaataaagggtgttcatgtaacat 42295200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 8e-48; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 11313979 - 11314107
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttc-ccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 207  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  11313979 ttatttattaattttgttacgtctgcagcaatttaacctaattttttttccgctcatttgctttattaggtttgcaattatttaacctaaaaaattccat 11314078  T
Q  208 ct-aaaaaatgcatcgcaccaatttcatt 235  Q
    || ||||||||||||||||||||||||||    
T  11314079 ctaaaaaaatgcatcgcaccaatttcatt 11314107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 108 - 235
Target Start/End: Complemental strand, 12442259 - 12442131
Alignment:
Q  108 tttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 207  Q
    |||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||    
T  12442259 tttatttattaattatgttaggtctgcagcaatttaacctaattttttcccgctcatttgccttattaggtttgcaattatttaacctaacaaattacat 12442160  T
Q  208 cta-aaaaatgcatcgcaccaatttcatt 235  Q
    ||| |||||||||||||||||||||||||    
T  12442159 ctacaaaaatgcatcgcaccaatttcatt 12442131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 35159704 - 35159830
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||    
T  35159704 ttatttattaattttgttacgtctgcagcaatttaaccta-ttttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattttatc 35159802  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||||||||||||||||||||||    
T  35159803 taaaaaaatgcatcgcaccaatttcatt 35159830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 104 - 235
Target Start/End: Original strand, 7127554 - 7127686
Alignment:
Q  104 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 203  Q
    |||| |||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||| ||||||||||    
T  7127554 catccttatttattaattttgttacgtttgcagcaatttaacctaattttttcctgctcatttgcttgattaggtttgcaattatttaaactaacaaatt 7127653  T
Q  204 ccatct-aaaaaatgcatcgcaccaatttcatt 235  Q
    |||||| |||||||| |||||||||||||||||    
T  7127654 ccatctaaaaaaatgtatcgcaccaatttcatt 7127686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 16528600 - 16528727
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| ||| || |||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||    
T  16528600 ttatttattaattttgttacgtctacaacaatttaacctaacattttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattctatc 16528699  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||||||||||||||||||||||    
T  16528700 taaaaaaatgcatcgcaccaatttcatt 16528727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 26523265 - 26523138
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||| | |||||||||||||||    
T  26523265 ttatttattaattttgttatgtctgcatcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttgatctaacaaattccatc 26523166  T
Q  209 taa-aaaatgcatcgcaccaatttcatt 235  Q
    ||| ||||||||||||||||||||||||    
T  26523165 taaaaaaatgcatcgcaccaatttcatt 26523138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 43395058 - 43394932
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||| ||||| | |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  43395058 ttatttattaattt-gttacgtttgcagcaatttaacctaattttttcctgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 43394960  T
Q  209 taa-aaaatgcatcgcaccaatttcatt 235  Q
    ||| ||||||||||||||||||||||||    
T  43394959 taaaaaaatgcatcgcaccaatttcatt 43394932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 7673329 - 7673196
Alignment:
Q  105 atctttatttattaattttgttacctctgcagcaatttaacctaatttttt-cccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 203  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||| ||||||| |||||||||||||||||||||||||||    
T  7673329 atctttatttattaattttgttacgtctgcagcaatttaacctaatttttttcccgttcatttgttttattaggtttgcaattatttaacctaacaaatt 7673230  T
Q  204 ccatctaa--aaaatgcatcgcaccaatttcatt 235  Q
     |||||||  ||||||||||||| ||||||||||    
T  7673229 tcatctaaaaaaaatgcatcgcatcaatttcatt 7673196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 235
Target Start/End: Original strand, 19121899 - 19122034
Alignment:
Q  101 taacatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaa 200  Q
    ||||||| |||||||||||||||||||  |||||| ||||||||||||||||||| |  |||||||||||||||| |||||||||| |||||||||||||    
T  19121899 taacatccttatttattaattttgttaggtctgcatcaatttaacctaatttttttcaactcatttgctttattaggtttgcaattgtttaacctaacaa 19121998  T
Q  201 attccatct-aaaaaatgcatcgcaccaatttcatt 235  Q
    |||| |||| ||||||||||||||||||||||||||    
T  19121999 attctatctaaaaaaatgcatcgcaccaatttcatt 19122034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 24351577 - 24351450
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    ||||||||||||||| |||  ||||||| |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||    
T  24351577 ttatttattaatttttttaggtctgcagtaatttaacctaattatttcccgctcatttgttttattaggtttgcaattatttaacctaacaaatttcatc 24351478  T
Q  209 taa-aaaatgcatcgcaccaatttcatt 235  Q
    ||| ||||||||||||||||||||||||    
T  24351477 taaaaaaatgcatcgcaccaatttcatt 24351450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 11313807 - 11313929
Alignment:
Q  114 tattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaa 212  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||| |||    
T  11313807 tattaattttgttacgtctgcaacaatttaacctaattttttcccgcacattttctttattaggtttgcaattatttaacctaacaaattccatctaaaa 11313906  T
Q  213 aaatgcatcgcaccaatttcatt 235  Q
    ||||| ||| |||||||||||||    
T  11313907 aaatgtatcccaccaatttcatt 11313929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 109 - 215
Target Start/End: Original strand, 16529135 - 16529241
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||||||||    
T  16529135 ttatttattaattttgttacgtctgcagcaatttaacctaattttttcgcgctcatttgctttattagatttgcaattatttaacgtaacaaattccatc 16529234  T
Q  209 taaaaaa 215  Q
    |||||||    
T  16529235 taaaaaa 16529241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 31487189 - 31487063
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||| ||| ||| | ||||||||||||||||| ||||    
T  31487189 ttatttattaattttgttaggtctgcagtaatttaacctaatattttcccgctcatttgctgtattaggttagcagtaatttaacctaacaaatttcatc 31487090  T
Q  209 taaaaaatgcatcgcaccaatttcatt 235  Q
    |||||||||||||||||||||||||||    
T  31487089 taaaaaatgcatcgcaccaatttcatt 31487063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 121 - 235
Target Start/End: Original strand, 16528793 - 16528908
Alignment:
Q  121 tttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgca 219  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||| |||||||| ||||||| ||    
T  16528793 tttgttacgtctgcagcaatttaacctaattttttcccgctcatttgccttattaggtttgcaaatatttaacctaacaacttccatctaaaaaaattca 16528892  T
Q  220 tcgcaccaatttcatt 235  Q
    ||||||||||||||||    
T  16528893 tcgcaccaatttcatt 16528908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 35159415 - 35159545
Alignment:
Q  105 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 204  Q
    |||||||||||||||||||||||| | |||| |||||||||||||||||| |||| || |||||||||||| |||||||||||||||||||||| |||||    
T  35159415 atctttatttattaattttgttacgt-tgcaacaatttaacctaattttt-cccgttcttttgctttattaggtttgcaattatttaacctaaccaattc 35159512  T
Q  205 catct--aaaaaatgcatcgcaccaatttcatt 235  Q
    |||||  ||||||||||||||||||||||||||    
T  35159513 catctaaaaaaaatgcatcgcaccaatttcatt 35159545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 16528959 - 16529084
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| ||||||||||||||||||||||||  || |||||||||| |||||| |||||||||||||||||||||||||||  |||    
T  16528959 ttatttattaattttgttacgtctgcagcaatttaacctaatttt--cctgctcatttgccttattaggtttgcaattatttaacctaacaaatttaatc 16529056  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||| ||||||||||||||||||    
T  16529057 taaaaaaattcatcgcaccaatttcatt 16529084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 11313640 - 11313769
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    ||||||||||||||| |||| ||| || |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||    
T  11313640 ttatttattaatttttttacgtctacaacaatttaacctaattttttcccgctcattttctttattaggtttgcaattatttaacctaacaaattctatc 11313739  T
Q  209 t---aaaaaatgcatcgcaccaatttcatt 235  Q
    |   ||||||||||| ||| ||||||||||    
T  11313740 taaaaaaaaatgcattgcatcaatttcatt 11313769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 101 - 235
Target Start/End: Original strand, 19122235 - 19122370
Alignment:
Q  101 taacatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaa 200  Q
    ||||||| |||||||||||||||||||  | |||| ||||||||||||||||||| || |||||||||||||||| |||||||||| |||||||||||||    
T  19122235 taacatccttatttattaattttgttaggtttgcatcaatttaacctaatttttttccactcatttgctttattaggtttgcaattgtttaacctaacaa 19122334  T
Q  201 attccatct-aaaaaatgcatcgcaccaatttcatt 235  Q
    |||| |||| |||||||||||| || ||||||||||    
T  19122335 attctatctaaaaaaatgcatcacatcaatttcatt 19122370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 41093175 - 41093047
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc--ca 206  Q
    |||||||||||||||||||  |||||| |||||||||||||||| |||| ||| ||||||||||||| ||||||||||||||||||||||||||||  |     
T  41093175 ttatttattaattttgttaggtctgcatcaatttaacctaatttattcctgctgatttgctttattaggtttgcaattatttaacctaacaaattcttcc 41093076  T
Q  207 tctaaaaaatgcatcgcaccaatttcatt 235  Q
    |  ||||||||||||||||||||||||||    
T  41093075 taaaaaaaatgcatcgcaccaatttcatt 41093047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 132 - 235
Target Start/End: Complemental strand, 24351001 - 24350897
Alignment:
Q  132 tgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaatgcatcgcaccaatt 230  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  24351001 tgcagtaatttaacctaattatttcccgctcatttgttttattaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatt 24350902  T
Q  231 tcatt 235  Q
    |||||    
T  24350901 tcatt 24350897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 109 - 215
Target Start/End: Complemental strand, 9488175 - 9488069
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||| ||| | |||||||||||||  |||||||||||||||||||||||||| ||||    
T  9488175 ttatttattaattttgttacgtctgcaacaatttaacctaatttttttccgtttatttgctttattagatttgcaattatttaacctaacaaatttcatc 9488076  T
Q  209 taaaaaa 215  Q
    |||||||    
T  9488075 taaaaaa 9488069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 107 - 235
Target Start/End: Complemental strand, 31486943 - 31486814
Alignment:
Q  107 ctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattcca 206  Q
    ||||||||||||||||| |||  |||||| |||||||||||||| |||||||| ||||||||| ||||| |||  || | ||||||||||||||||||||    
T  31486943 ctttatttattaatttttttaggtctgcaacaatttaacctaatattttcccgttcatttgctgtattaggttaacagtaatttaacctaacaaattcca 31486844  T
Q  207 tctaa-aaaatgcatcgcaccaatttcatt 235  Q
    ||||| ||||||||||||||||||||||||    
T  31486843 tctaaaaaaatgcatcgcaccaatttcatt 31486814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 10409525 - 10409652
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||| ||| ||| ||||||| ||||||||||||||||||||| ||| | ||  |||||||||||||||||||||||||| |||     
T  10409525 ttatttattaattttgttacgtctccagtaatttaatctaattttttcccgctcattttcttcactagatttgcaattatttaacctaacaaatttcatt 10409624  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||||||||||| ||||||||||    
T  10409625 taaaaaaatgcatcgcatcaatttcatt 10409652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 109 - 215
Target Start/End: Original strand, 16526197 - 16526304
Alignment:
Q  109 ttatttattaa-ttttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 207  Q
    ||||||||||| ||||||||| |||||| |||||||||||||||||||  | |||||||||||||||| |||||||||||||||||||||||||||||||    
T  16526197 ttatttattaaattttgttacgtctgcatcaatttaacctaattttttttcactcatttgctttattaggtttgcaattatttaacctaacaaattccat 16526296  T
Q  208 ctaaaaaa 215  Q
     |||||||    
T  16526297 ttaaaaaa 16526304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 41092995 - 41092870
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  |||||| |||||||||||||||| |||| |||| |||||||||||| ||||||||||||||||||||||||||| ||||    
T  41092995 ttatttattaattttgttaggtctgcatcaatttaacctaatttattcc-gctcttttgctttattaggtttgcaattatttaacctaacaaatt-catc 41092898  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | |||||||||||| | |||||||||||    
T  41092897 taaaaaaatgcatcaccccaatttcatt 41092870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 14166289 - 14166160
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcc-cgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 207  Q
    |||||||||||||||||||  ||||||| |||||||| |||||||||   |  |||||||||||||||||||||||||||||||||||||||||||||||    
T  14166289 ttatttattaattttgttaggtctgcagtaatttaacttaatttttttttcagtcatttgctttattatgtttgcaattatttaacctaacaaattccat 14166190  T
Q  208 ct--aaaaaatgcatcgcaccaatttcatt 235  Q
     |  ||||||||||||||| ||||||||||    
T  14166189 ttaaaaaaaatgcatcgcatcaatttcatt 14166160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 23138032 - 23138160
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||| ||||  ||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||| |||| |||||| |||||||    
T  23138032 ttatttattaatttcgttaggtctgcagcattttaacctaattttttcc-gctcatttgctttattaggtttgcaattatataacgtaacaagttccatc 23138130  T
Q  209 t-aaaaaatgcatcg--caccaatttcatt 235  Q
    | |||||||||||||  |||||||||||||    
T  23138131 taaaaaaatgcatcgcacaccaatttcatt 23138160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 109 - 202
Target Start/End: Complemental strand, 26523361 - 26523268
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaat 202  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  26523361 ttatttattaattttgttatgtctgcatcaatttaacctaattttttcccgcttatttgctttattaggtttgcaattatttgacctaacaaat 26523268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 13035309 - 13035178
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaatta----tttaacctaacaaattc 204  Q
    |||||||||||||||||    ||||||||||||||| |||||||||| ||||||||| | ||||||| |||||||||||    ||||||||||||||||     
T  13035309 ttatttattaattttgtatggtctgcagcaatttaatctaatttttttccgctcattagttttattaggtttgcaattatttatttaacctaacaaattt 13035210  T
Q  205 catct-aaaaaatgcatcgcaccaatttcatt 235  Q
    ||||| ||||||||||||||||||||||||||    
T  13035209 catctaaaaaaatgcatcgcaccaatttcatt 13035178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 13105284 - 13105153
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaatta----tttaacctaacaaattc 204  Q
    |||||||||||||||||    ||||||||| |||||||||||||||| ||||||||| | ||||||| |||||||||||    ||||||||||||||||     
T  13105284 ttatttattaattttgtatggtctgcagcagtttaacctaatttttttccgctcattagttttattaggtttgcaattatttatttaacctaacaaattt 13105185  T
Q  205 catct-aaaaaatgcatcgcaccaatttcatt 235  Q
    ||||| ||||||||||||||||||||||||||    
T  13105184 catctaaaaaaatgcatcgcaccaatttcatt 13105153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 43395207 - 43395107
Alignment:
Q  138 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaa---atgcatcgcaccaatttcat 234  Q
    |||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||| ||||||   ||||||||||||||||||||    
T  43395207 aatttaacttgattttttcccgctcatttgctttattaggtttccaattatttaacctaacaaattacatgtaaaaaaatatgcatcgcaccaatttcat 43395108  T
Q  235 t 235  Q
    |    
T  43395107 t 43395107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 16305348 - 16305473
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  | || |  ||||||| ||||||||  |||||||||||||||||||| |||||||||||||||| |||| ||||||||||    
T  16305348 ttatttattaattttgttaggtttgtaataatttaaactaatttt--cccgctcatttgctttattaggtttgcaattatttaatctaataaattccatc 16305445  T
Q  209 t-aaaaaatgcatcgcaccaatttcatt 235  Q
    | ||||||||||  ||| ||||||||||    
T  16305446 taaaaaaatgcacagcatcaatttcatt 16305473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 130 - 193
Target Start/End: Original strand, 24326546 - 24326609
Alignment:
Q  130 tctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaac 193  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24326546 tctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaac 24326609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 130 - 193
Target Start/End: Complemental strand, 24350795 - 24350732
Alignment:
Q  130 tctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaac 193  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24350795 tctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaac 24350732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 130 - 193
Target Start/End: Complemental strand, 24351349 - 24351286
Alignment:
Q  130 tctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaac 193  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24351349 tctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaac 24351286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 38004744 - 38004646
Alignment:
Q  136 gcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcatt 235  Q
    |||||||||| ||||||||| | | |||||||||||| || ||||| |||||||||| |||| ||||| |||||||||||||||||||| ||||||||||    
T  38004744 gcaatttaacttaatttttttc-gttcatttgctttaataggtttgtaattatttaatctaataaatttcatctaaaaaatgcatcgcatcaatttcatt 38004646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 26523542 - 26523414
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc---gctcatttgctttattatgtttgcaattatttaacctaacaaattcc 205  Q
    |||||||||||||||||||  | |||| || |||||| |||||||||  |   ||||||||||||||||||  ||||||||||||||| ||||||||| |    
T  26523542 ttatttattaattttgttaggtgtgcaccattttaacttaattttttttctttgctcatttgctttattat--ttgcaattatttaacataacaaatttc 26523445  T
Q  206 atctaa-aaaatgcatcgcaccaatttcatt 235  Q
    |||||| |||||||||| || ||||||||||    
T  26523444 atctaaaaaaatgcatcacatcaatttcatt 26523414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 7673145 - 7673100
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttt 154  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  7673145 ttatttattaattttgttacgtctgcagcaatttaacctaattttt 7673100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 38109886 - 38109933
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttc 156  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  38109886 ttatttattaattttgttacgtctgcagcaatttaacctatttttttc 38109933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 22431585 - 22431634
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc 158  Q
    |||||||||||||||||||  |||||||||| ||||||||||||||||||    
T  22431585 ttatttattaattttgttaagtctgcagcaacttaacctaattttttccc 22431634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 38109946 - 38109994
Alignment:
Q  188 tttaacctaacaaattccatctaaaa-aatgcatcgcaccaatttcatt 235  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  38109946 tttaatctaacaaattccatctaaaaaaatgcatcgcaccaatttcatt 38109994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 33855098 - 33855138
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  33855098 tgtacaatggggtgtaggaataaagggtgttcatgtaacat 33855138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 38268880 - 38268924
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaatttt 153  Q
    |||||||||||||||||||  |||||| |||||||||||||||||    
T  38268880 ttatttattaattttgttaggtctgcaacaatttaacctaatttt 38268924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 24271164 - 24271123
Alignment:
Q  195 taacaaattccatctaaaaaa-tgcatcgcaccaatttcatt 235  Q
    ||||||||||||||||||||| ||||||||||| ||||||||    
T  24271164 taacaaattccatctaaaaaaatgcatcgcacccatttcatt 24271123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 24325983 - 24326024
Alignment:
Q  195 taacaaattccatctaaaa-aatgcatcgcaccaatttcatt 235  Q
    ||||||||||||||||||| ||||||||||||| ||||||||    
T  24325983 taacaaattccatctaaaaaaatgcatcgcacccatttcatt 24326024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 24347786 - 24347745
Alignment:
Q  195 taacaaattccatctaaaaaa-tgcatcgcaccaatttcatt 235  Q
    ||||||||||||||||||||| ||||||||||| ||||||||    
T  24347786 taacaaattccatctaaaaaaatgcatcgcacccatttcatt 24347745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 2614704 - 2614744
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  2614704 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 2614744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 7617178 - 7617138
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||| ||||| |||||||| |||||||||||||||||||||    
T  7617178 tgtataatggagtgtatgaataaagggtgttcatgtaacat 7617138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 18034027 - 18033987
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||||| ||||| || |||||||||||||||||||||    
T  18034027 tgtacaatggagtgtaggaataaagggtgttcatgtaacat 18033987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 22512350 - 22512310
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||||| ||||| || |||||||||||||||||||||    
T  22512350 tgtacaatggagtgtaggaataaagggtgttcatgtaacat 22512310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 25915042 - 25915082
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||| |||||| || |||||||||||||||||||||    
T  25915042 tgtacaatgaggtgtaggaataaagggtgttcatgtaacat 25915082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 32473449 - 32473489
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||  ||||||||| |||||||||||||||||||||    
T  32473449 tgtacaataaggtgtatgattaaagggtgttcatgtaacat 32473489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 41334718 - 41334758
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||| |||| ||||||||| |||||||||||||||||||||    
T  41334718 tgtataatgaggtgtatgaataaagggtgttcatgtaacat 41334758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 109 - 232
Target Start/End: Complemental strand, 163908 - 163784
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||||||||  ||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  163908 ttatttattaattttgttaggtctgcagcaatttaacctactttttttccgctcatttgctttattaggtttgcaattatttaacctaataaattccatc 163809  T
Q  209 t-aaaaaatgcatcgcaccaatttc 232  Q
    | |||||||||||||||||||||||    
T  163808 tgaaaaaatgcatcgcaccaatttc 163784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 163270 - 163228
Alignment:
Q  112 tttattaattttgttacctctgcagcaatttaacctaattttt 154  Q
    ||||||||||||||||  |||||||||| ||||||||||||||    
T  163270 tttattaattttgttaagtctgcagcaacttaacctaattttt 163228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 109 - 222
Target Start/End: Complemental strand, 1640 - 1526
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaa-ttttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 207  Q
    |||||||||||||||||||| ||||||||||||||| |||| ||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||    
T  1640 ttatttattaattttgttacgtctgcagcaatttaatctaaattttttcccactcatttgctttattaagtttgcaattatttaacctaataaattccat 1541  T
Q  208 ctaaaaaatgcatcg 222  Q
    |||||||||||||||    
T  1540 ctaaaaaatgcatcg 1526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 102701 - 102830
Alignment:
Q  105 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 204  Q
    |||||||||||||||||||||||  | ||||  ||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  102701 atctttatttattaattttgttagatatgcaataatt--acctaattttttcccgctcatttgctttattaagtttgcaattatttaacctaacaaattc 102798  T
Q  205 catct-aaaaaatgcatcgcaccaatttcatt 235  Q
    ||||| ||||||||||||||| ||||||||||    
T  102799 catctaaaaaaatgcatcgcatcaatttcatt 102830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 13092 - 13221
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 208  Q
    |||||||||||||| |||   |||||| ||||||||||||||||||| ||||||||||| ||||||| |||||| |||||||||||||||||||||||||    
T  13092 ttatttattaatttcgtttggtctgcaacaatttaacctaatttttttccgctcatttggtttattaggtttgccattatttaacctaacaaattccatc 13191  T
Q  209 taaa---aaatgcatcgcaccaatttcatt 235  Q
    ||||   |||||||||||||||||||||||    
T  13192 taaaaacaaatgcatcgcaccaatttcatt 13221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 13285 - 13378
Alignment:
Q  143 aacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcatt 235  Q
    |||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  13285 aacctaattttttccctctcatttgctttattagggttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatttcatt 13378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 104 - 212
Target Start/End: Complemental strand, 12496 - 12386
Alignment:
Q  104 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac--aaa 201  Q
    |||| |||||||||||||||||||  | |||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||  |||    
T  12496 catccttatttattaattttgttaggtttgcagcaatttaacctaatttttttccgctcatttgttttattaggtttgcaattatttaacctaacaaaaa 12397  T
Q  202 ttccatctaaa 212  Q
    |||||||||||    
T  12396 ttccatctaaa 12386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 103 - 232
Target Start/End: Complemental strand, 14692 - 14562
Alignment:
Q  103 acatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaat 202  Q
    ||||| |||||||||||||||||||| | |||| ||||||||| |||||| ||| |||||||||| |||||||  |||||||||||||||||||||||||    
T  14692 acatccttatttattaattttgttacatttgcatcaatttaacttaatttattctcgctcatttgttttattagatttgcaattatttaacctaacaaat 14593  T
Q  203 tccatct-aaaaaatgcatcgcaccaatttc 232  Q
    || |||| |||||||||||| || |||||||    
T  14592 tctatctaaaaaaatgcatcccatcaatttc 14562  T

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Target: scaffold0001 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 196803 - 196680
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaat-tttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 207  Q
    |||||||||||||||||||  |   |||| |||||||||||| ||||| ||||||||||||| ||||| ||| |   | |||||||||||||||||||||    
T  196803 ttatttattaattttgttagat---cagccatttaacctaatattttttccgctcatttgctgtattaggttaggtgtaatttaacctaacaaattccat 196707  T
Q  208 ct-aaaaaatgcatcgcaccaatttca 233  Q
    || ||||||||||||||||||||||||    
T  196706 ctaaaaaaatgcatcgcaccaatttca 196680  T

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Target: scaffold0097 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 12735 - 12799
Alignment:
Q  172 attatgtttgcaattatttaacctaacaaattccatctaaa-aaatgcatcgcaccaatttcatt 235  Q
    |||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  12735 attaagtttgcaattatttaacctaacaaatttcatctaaataaatgcatcgcaccaatttcatt 12799  T

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Target: scaffold1155 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold1155
Description:

Target: scaffold1155; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 1152 - 1105
Alignment:
Q  188 tttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcatt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1152 tttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcatt 1105  T

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Target: scaffold1155; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 1018 - 958
Alignment:
Q  141 ttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaa 201  Q
    |||||||||| ||||||| |||||||||||||||| |||  || | |||||||||||||||    
T  1018 ttaacctaatattttccctctcatttgctttattaggttatcactaatttaacctaacaaa 958  T

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Target: scaffold0105 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 29915 - 29868
Alignment:
Q  188 tttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcatt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29915 tttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcatt 29868  T

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Target: scaffold0105; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 29781 - 29721
Alignment:
Q  141 ttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaa 201  Q
    |||||||||| ||||||| |||||||||||||||| |||  || | |||||||||||||||    
T  29781 ttaacctaatattttccctctcatttgctttattaggttatcactaatttaacctaacaaa 29721  T

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Target: scaffold0345 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 9064 - 9112
Alignment:
Q  188 tttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcatt 235  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9064 tttaacctaacaaattccatctaaaaaaatgcatcgcaccaatttcatt 9112  T

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Target: scaffold0345; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 9199 - 9259
Alignment:
Q  141 ttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaa 201  Q
    |||||||||| ||||||| |||||||||||||||| |||  || | |||||||||||||||    
T  9199 ttaacctaatattttccctctcatttgctttattaggttatcactaatttaacctaacaaa 9259  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 45774 - 45814
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  45774 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 45814  T

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Target: scaffold0432 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 5415 - 5370
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttt 154  Q
    ||||||||||||||| |||  |||||||||| ||||||||||||||    
T  5415 ttatttattaattttattaggtctgcagcaacttaacctaattttt 5370  T

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Target: scaffold0318 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 5996 - 6045
Alignment:
Q  109 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc 158  Q
    ||||||||||||||| |||  ||||| || ||||||||||||||||||||    
T  5996 ttatttattaattttattaggtctgcggcgatttaacctaattttttccc 6045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 11296 - 11256
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||||||||||||| ||||| |||||||||| ||||    
T  11296 tgtacaatggggtgtatgaataaagtgtgttcatgtgacat 11256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 14243 - 14283
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||||||||||  | |||||||||||||||||||||    
T  14243 tgtacaatggggtgtagaaataaagggtgttcatgtaacat 14283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 24571 - 24611
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||||||||||  | |||||||||||||||||||||    
T  24571 tgtacaatggggtgtagaaataaagggtgttcatgtaacat 24611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 730 - 690
Alignment:
Q  66 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 106  Q
    ||||||||| |||||| || |||||||||||||||||||||    
T  730 tgtacaatgaggtgtaggaataaagggtgttcatgtaacat 690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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