View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1843_low_8 (Length: 256)

Name: NF1843_low_8
Description: NF1843
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1843_low_8
NF1843_low_8
[»] chr8 (38 HSPs)
chr8 (45-242)||(13224998-13225195)
chr8 (55-242)||(19176289-19176476)
chr8 (57-242)||(31133579-31133764)
chr8 (56-242)||(41681493-41681679)
chr8 (54-242)||(44831245-44831433)
chr8 (59-242)||(9928912-9929095)
chr8 (52-242)||(11656816-11657006)
chr8 (59-242)||(12572210-12572393)
chr8 (55-242)||(33742921-33743107)
chr8 (58-242)||(33328499-33328683)
chr8 (55-215)||(34540934-34541094)
chr8 (55-216)||(41681133-41681292)
chr8 (55-216)||(19176676-19176836)
chr8 (54-216)||(33328156-33328317)
chr8 (55-216)||(12571862-12572023)
chr8 (55-211)||(4629796-4629952)
chr8 (52-216)||(9930043-9930206)
chr8 (55-216)||(11656454-11656615)
chr8 (55-216)||(31133219-31133379)
chr8 (55-216)||(44831631-44831791)
chr8 (56-216)||(9178022-9178180)
chr8 (60-216)||(13224645-13224799)
chr8 (55-164)||(11336959-11337068)
chr8 (148-242)||(9177724-9177818)
chr8 (54-168)||(8073985-8074098)
chr8 (108-216)||(33743305-33743412)
chr8 (59-216)||(4630178-4630328)
chr8 (59-182)||(10918129-10918252)
chr8 (55-216)||(35427199-35427359)
chr8 (135-182)||(43958264-43958311)
chr8 (57-216)||(28254813-28254971)
chr8 (161-216)||(18805267-18805321)
chr8 (55-89)||(9177666-9177700)
chr8 (54-96)||(10919691-10919733)
chr8 (56-216)||(18049590-18049750)
chr8 (53-216)||(18428148-18428311)
chr8 (58-107)||(43958211-43958260)
chr8 (53-101)||(28877390-28877438)
[»] chr7 (43 HSPs)
chr7 (55-242)||(19590884-19591071)
chr7 (45-242)||(32004603-32004800)
chr7 (55-242)||(38859000-38859187)
chr7 (55-242)||(37787126-37787313)
chr7 (52-242)||(19830779-19830968)
chr7 (56-242)||(35288903-35289089)
chr7 (55-242)||(2658838-2659025)
chr7 (69-242)||(29099863-29100036)
chr7 (55-242)||(34533790-34533977)
chr7 (59-242)||(4641803-4641983)
chr7 (55-239)||(23952729-23952914)
chr7 (52-216)||(37786763-37786926)
chr7 (59-216)||(19830423-19830579)
chr7 (56-216)||(19590525-19590684)
chr7 (55-216)||(34534177-34534337)
chr7 (52-216)||(38858639-38858802)
chr7 (55-216)||(35289287-35289447)
chr7 (56-216)||(32005000-32005159)
chr7 (53-216)||(29100237-29100399)
chr7 (55-216)||(2659226-2659386)
chr7 (54-216)||(4641438-4641599)
chr7 (62-216)||(23953115-23953268)
chr7 (55-172)||(38160950-38161067)
chr7 (59-216)||(4478086-4478242)
chr7 (55-182)||(28583438-28583565)
chr7 (57-182)||(28584341-28584466)
chr7 (155-242)||(4477800-4477887)
chr7 (54-216)||(34595159-34595320)
chr7 (58-216)||(9181534-9181691)
chr7 (58-236)||(9393738-9393914)
chr7 (52-195)||(49064030-49064171)
chr7 (59-216)||(35578902-35579057)
chr7 (59-216)||(25637585-25637741)
chr7 (56-216)||(27245203-27245363)
chr7 (55-216)||(48247978-48248139)
chr7 (57-216)||(35579273-35579430)
chr7 (55-216)||(7732487-7732647)
chr7 (59-216)||(26026320-26026477)
chr7 (161-216)||(32427407-32427461)
chr7 (54-120)||(39137014-39137081)
chr7 (53-206)||(7732884-7733036)
chr7 (180-216)||(26048071-26048107)
chr7 (180-216)||(28687886-28687922)
[»] chr6 (44 HSPs)
chr6 (55-242)||(22219712-22219899)
chr6 (55-242)||(11445346-11445533)
chr6 (55-242)||(12935156-12935343)
chr6 (52-242)||(20741460-20741653)
chr6 (55-242)||(23075487-23075674)
chr6 (59-216)||(10899942-10900099)
chr6 (54-242)||(31470313-31470501)
chr6 (59-242)||(18504922-18505105)
chr6 (55-242)||(2319671-2319857)
chr6 (56-242)||(18257496-18257682)
chr6 (57-236)||(15827639-15827819)
chr6 (53-216)||(11276587-11276750)
chr6 (55-216)||(18257136-18257296)
chr6 (55-216)||(20741099-20741259)
chr6 (56-216)||(10900316-10900475)
chr6 (51-242)||(4811616-4811806)
chr6 (56-216)||(11276968-11277127)
chr6 (54-216)||(15828027-15828188)
chr6 (57-216)||(31470702-31470860)
chr6 (55-216)||(12935543-12935703)
chr6 (57-216)||(18505305-18505463)
chr6 (55-216)||(28472636-28472795)
chr6 (55-216)||(29859825-29859984)
chr6 (56-216)||(1149817-1149977)
chr6 (55-216)||(11444986-11445146)
chr6 (59-216)||(2322605-2322760)
chr6 (54-153)||(23073997-23074096)
chr6 (53-182)||(29033431-29033560)
chr6 (56-216)||(4811372-4811531)
chr6 (55-144)||(1149464-1149553)
chr6 (55-173)||(18296144-18296262)
chr6 (54-182)||(3835145-3835273)
chr6 (58-169)||(29035069-29035180)
chr6 (53-216)||(35163573-35163736)
chr6 (186-242)||(1149558-1149614)
chr6 (56-112)||(22534214-22534270)
chr6 (169-235)||(32836114-32836179)
chr6 (149-216)||(31573817-31573884)
chr6 (149-217)||(25468943-25469011)
chr6 (56-216)||(31073529-31073688)
chr6 (198-242)||(28472997-28473041)
chr6 (180-216)||(28636583-28636619)
chr6 (53-101)||(31574226-31574274)
chr6 (124-184)||(33095782-33095842)
[»] chr5 (57 HSPs)
chr5 (55-242)||(8647797-8647984)
chr5 (59-242)||(5818932-5819115)
chr5 (55-242)||(19359495-19359682)
chr5 (54-242)||(8461290-8461478)
chr5 (58-242)||(2864756-2864940)
chr5 (56-242)||(164191-164376)
chr5 (58-240)||(14215243-14215425)
chr5 (55-242)||(24331558-24331747)
chr5 (59-242)||(18182973-18183156)
chr5 (54-242)||(29454738-29454926)
chr5 (53-242)||(25000448-25000637)
chr5 (59-242)||(16018946-16019129)
chr5 (56-235)||(15709335-15709513)
chr5 (55-216)||(2865141-2865301)
chr5 (55-216)||(18183355-18183515)
chr5 (56-216)||(5819315-5819474)
chr5 (56-216)||(8647438-8647597)
chr5 (56-213)||(19359136-19359292)
chr5 (55-216)||(24362222-24362382)
chr5 (62-242)||(24361843-24362022)
chr5 (58-242)||(15371873-15372060)
chr5 (54-216)||(29455128-29455289)
chr5 (55-216)||(14215629-14215789)
chr5 (59-216)||(15372259-15372415)
chr5 (55-216)||(15708970-15709129)
chr5 (62-242)||(24325218-24325397)
chr5 (55-216)||(8460929-8461089)
chr5 (55-216)||(14463907-14464066)
chr5 (55-216)||(164577-164737)
chr5 (52-173)||(16018585-16018705)
chr5 (56-182)||(7349436-7349562)
chr5 (58-216)||(24331946-24332107)
chr5 (57-173)||(4222150-4222266)
chr5 (56-182)||(7348559-7348685)
chr5 (56-173)||(4623148-4623265)
chr5 (62-182)||(6019189-6019309)
chr5 (78-216)||(25000112-25000249)
chr5 (51-184)||(6018309-6018441)
chr5 (56-173)||(4219663-4219780)
chr5 (138-216)||(14462686-14462768)
chr5 (144-239)||(10721873-10721967)
chr5 (53-216)||(41834446-41834608)
chr5 (144-235)||(27307148-27307238)
chr5 (69-182)||(4624644-4624757)
chr5 (144-242)||(28494931-28495029)
chr5 (55-216)||(28290031-28290191)
chr5 (55-216)||(15029696-15029856)
chr5 (155-216)||(28495228-28495288)
chr5 (155-216)||(32305916-32305976)
chr5 (58-235)||(16752938-16753114)
chr5 (58-216)||(22651347-22651504)
chr5 (107-173)||(13814155-13814226)
chr5 (161-216)||(27307445-27307499)
chr5 (144-242)||(13557079-13557176)
chr5 (60-213)||(38900648-38900800)
chr5 (55-216)||(16752581-16752740)
chr5 (54-216)||(28289682-28289843)
[»] chr4 (74 HSPs)
chr4 (55-242)||(15523234-15523421)
chr4 (56-242)||(22434179-22434365)
chr4 (56-242)||(45082783-45082969)
chr4 (56-242)||(12234688-12234874)
chr4 (56-242)||(46193405-46193591)
chr4 (55-242)||(20470870-20471057)
chr4 (51-242)||(25447242-25447433)
chr4 (55-242)||(23494802-23494989)
chr4 (52-242)||(25938030-25938220)
chr4 (53-242)||(11153143-11153332)
chr4 (59-242)||(4219918-4220101)
chr4 (59-242)||(54995072-54995255)
chr4 (51-237)||(48526545-48526731)
chr4 (55-242)||(51021155-51021341)
chr4 (54-242)||(18751597-18751785)
chr4 (51-242)||(2118288-2118480)
chr4 (73-242)||(12503453-12503622)
chr4 (58-216)||(33109686-33109843)
chr4 (55-216)||(25447622-25447782)
chr4 (56-216)||(11153533-11153692)
chr4 (53-216)||(46193791-46193953)
chr4 (55-216)||(12234328-12234488)
chr4 (55-216)||(25937669-25937829)
chr4 (52-216)||(23494439-23494602)
chr4 (55-182)||(33109883-33110010)
chr4 (58-216)||(4219559-4219716)
chr4 (54-216)||(15523620-15523781)
chr4 (58-216)||(38962205-38962362)
chr4 (53-216)||(22170323-22170484)
chr4 (59-216)||(22434564-22434718)
chr4 (55-216)||(48526195-48526354)
chr4 (55-216)||(51020796-51020956)
chr4 (59-216)||(54995454-54995609)
chr4 (52-216)||(2118682-2118844)
chr4 (58-170)||(18763951-18764063)
chr4 (59-216)||(45082435-45082589)
chr4 (57-173)||(20958288-20958403)
chr4 (55-162)||(48708294-48708401)
chr4 (56-173)||(35363028-35363146)
chr4 (55-170)||(48293593-48293708)
chr4 (54-184)||(10258304-10258434)
chr4 (57-173)||(44892576-44892692)
chr4 (74-173)||(43243708-43243807)
chr4 (52-182)||(16690932-16691062)
chr4 (54-126)||(16318251-16318323)
chr4 (59-170)||(48713777-48713888)
chr4 (74-182)||(43281210-43281317)
chr4 (56-182)||(48294961-48295088)
chr4 (56-182)||(16691491-16691616)
chr4 (63-168)||(20957196-20957301)
chr4 (57-182)||(44890518-44890643)
chr4 (124-216)||(12503822-12503913)
chr4 (114-182)||(43242328-43242396)
chr4 (54-216)||(17503972-17504132)
chr4 (124-216)||(17504346-17504437)
chr4 (56-164)||(55189528-55189636)
chr4 (59-229)||(40160465-40160633)
chr4 (155-216)||(35193406-35193466)
chr4 (52-216)||(24336150-24336313)
chr4 (56-216)||(34789382-34789541)
chr4 (117-173)||(44220805-44220861)
chr4 (54-216)||(12593022-12593183)
chr4 (56-182)||(30597940-30598065)
chr4 (54-216)||(229546-229707)
chr4 (55-235)||(35193672-35193849)
chr4 (58-216)||(34789769-34789927)
chr4 (53-216)||(45838934-45839098)
chr4 (54-101)||(55677459-55677506)
chr4 (198-236)||(10795692-10795730)
chr4 (155-216)||(14439926-14439987)
chr4 (175-216)||(46736774-46736814)
chr4 (180-216)||(26974407-26974443)
chr4 (58-216)||(28465083-28465240)
chr4 (48-80)||(51310027-51310059)
[»] chr3 (85 HSPs)
chr3 (56-242)||(37727289-37727475)
chr3 (52-235)||(39555574-39555757)
chr3 (53-242)||(31778650-31778839)
chr3 (55-242)||(4275723-4275910)
chr3 (55-242)||(43973799-43973986)
chr3 (53-242)||(20840920-20841109)
chr3 (54-242)||(27393659-27393847)
chr3 (55-242)||(17464490-17464677)
chr3 (56-242)||(25853234-25853420)
chr3 (55-242)||(5137340-5137527)
chr3 (55-242)||(22424813-22425000)
chr3 (55-242)||(29801775-29801962)
chr3 (53-242)||(32534956-32535145)
chr3 (56-242)||(23644823-23645010)
chr3 (54-240)||(30098121-30098310)
chr3 (59-234)||(26837363-26837538)
chr3 (53-242)||(24300554-24300742)
chr3 (53-242)||(26274564-26274753)
chr3 (52-240)||(41047060-41047246)
chr3 (55-216)||(31779038-31779198)
chr3 (56-216)||(39555963-39556122)
chr3 (55-216)||(20840559-20840719)
chr3 (59-216)||(5136983-5137139)
chr3 (59-216)||(41046703-41046859)
chr3 (55-212)||(48452988-48453144)
chr3 (53-216)||(37726926-37727088)
chr3 (55-216)||(24300942-24301102)
chr3 (56-216)||(43973441-43973600)
chr3 (53-216)||(23644459-23644621)
chr3 (56-216)||(32535345-32535508)
chr3 (54-216)||(27393963-27394124)
chr3 (55-216)||(30104481-30104640)
chr3 (60-206)||(22425209-22425354)
chr3 (58-216)||(25853613-25853770)
chr3 (55-216)||(26837742-26837901)
chr3 (56-173)||(29801356-29801473)
chr3 (56-182)||(23228427-23228552)
chr3 (54-216)||(17464877-17465039)
chr3 (59-182)||(25612396-25612519)
chr3 (59-216)||(26274953-26275108)
chr3 (55-182)||(51474753-51474880)
chr3 (56-182)||(50116828-50116954)
chr3 (57-170)||(51473429-51473542)
chr3 (57-173)||(32697128-32697244)
chr3 (55-167)||(45965937-45966049)
chr3 (55-173)||(37220556-37220674)
chr3 (58-182)||(25420560-25420684)
chr3 (55-142)||(37222030-37222117)
chr3 (75-170)||(18010176-18010271)
chr3 (57-153)||(25419145-25419242)
chr3 (55-216)||(27200079-27200238)
chr3 (59-170)||(32695706-32695817)
chr3 (54-216)||(51827955-51828116)
chr3 (161-216)||(55192222-55192276)
chr3 (150-236)||(8873784-8873869)
chr3 (59-216)||(22370599-22370756)
chr3 (55-216)||(49407795-49407954)
chr3 (55-216)||(55389604-55389764)
chr3 (144-232)||(2323466-2323553)
chr3 (149-216)||(37075781-37075847)
chr3 (58-216)||(52237204-52237361)
chr3 (58-216)||(36701483-36701640)
chr3 (161-235)||(50900637-50900710)
chr3 (54-216)||(36701104-36701267)
chr3 (55-216)||(50900915-50901074)
chr3 (53-216)||(330223-330385)
chr3 (56-216)||(40275093-40275254)
chr3 (55-216)||(47431695-47431856)
chr3 (55-216)||(49720370-49720530)
chr3 (55-216)||(52375718-52375878)
chr3 (54-170)||(23227260-23227370)
chr3 (180-216)||(32730776-32730812)
chr3 (149-216)||(8874073-8874138)
chr3 (53-216)||(14654578-14654738)
chr3 (59-216)||(40839039-40839195)
chr3 (150-216)||(43222776-43222842)
chr3 (155-216)||(50662799-50662860)
chr3 (150-216)||(51828344-51828410)
chr3 (54-87)||(25611496-25611529)
chr3 (7-48)||(28871325-28871366)
chr3 (155-216)||(37847207-37847267)
chr3 (155-216)||(43222488-43222549)
chr3 (175-216)||(52236935-52236975)
chr3 (180-216)||(40838775-40838811)
chr3 (180-216)||(52375450-52375486)
[»] chr1 (58 HSPs)
chr1 (57-242)||(4636330-4636515)
chr1 (55-242)||(50970277-50970464)
chr1 (58-242)||(17433574-17433758)
chr1 (58-242)||(21856044-21856228)
chr1 (53-242)||(33143912-33144103)
chr1 (54-242)||(39154379-39154567)
chr1 (56-242)||(29869978-29870164)
chr1 (57-242)||(5539817-5540002)
chr1 (57-242)||(8678542-8678727)
chr1 (54-242)||(18984478-18984666)
chr1 (55-242)||(15173453-15173639)
chr1 (55-242)||(15646191-15646378)
chr1 (56-216)||(29307327-29307487)
chr1 (56-229)||(26859059-26859232)
chr1 (54-216)||(15646581-15646742)
chr1 (55-216)||(9019348-9019509)
chr1 (52-216)||(50970664-50970827)
chr1 (57-240)||(5962579-5962762)
chr1 (53-216)||(5540204-5540366)
chr1 (55-216)||(18984118-18984278)
chr1 (56-216)||(29306953-29307112)
chr1 (54-216)||(5962964-5963125)
chr1 (54-216)||(29869618-29869779)
chr1 (58-216)||(33144305-33144462)
chr1 (56-216)||(8678928-8679086)
chr1 (56-216)||(21856429-21856588)
chr1 (56-242)||(17112282-17112467)
chr1 (59-216)||(15173099-15173255)
chr1 (56-216)||(17433216-17433375)
chr1 (55-216)||(26859446-26859605)
chr1 (55-206)||(9018972-9019122)
chr1 (58-216)||(39154021-39154178)
chr1 (54-182)||(52268288-52268416)
chr1 (58-172)||(52269177-52269291)
chr1 (55-142)||(2733416-2733503)
chr1 (64-156)||(47827033-47827125)
chr1 (55-216)||(44802558-44802718)
chr1 (58-131)||(47826966-47827039)
chr1 (116-216)||(4636033-4636131)
chr1 (59-236)||(45048504-45048678)
chr1 (55-216)||(17088527-17088686)
chr1 (52-216)||(44954613-44954776)
chr1 (149-216)||(17088243-17088309)
chr1 (55-216)||(9992153-9992314)
chr1 (55-117)||(52235153-52235215)
chr1 (52-216)||(10278544-10278708)
chr1 (55-215)||(29021252-29021412)
chr1 (59-216)||(39485068-39485223)
chr1 (155-216)||(45048253-45048313)
chr1 (56-137)||(50419725-50419806)
chr1 (149-216)||(8229732-8229799)
chr1 (149-216)||(17641751-17641818)
chr1 (155-216)||(9833539-9833599)
chr1 (144-213)||(44291701-44291769)
chr1 (180-216)||(8230028-8230064)
chr1 (53-101)||(29438927-29438975)
chr1 (180-216)||(34555767-34555803)
chr1 (180-216)||(44954349-44954385)
[»] chr2 (59 HSPs)
chr2 (54-242)||(18450828-18451016)
chr2 (58-242)||(40815347-40815531)
chr2 (55-242)||(22374684-22374871)
chr2 (55-242)||(43058692-43058878)
chr2 (55-243)||(7446704-7446892)
chr2 (54-242)||(28616973-28617161)
chr2 (52-240)||(40027501-40027689)
chr2 (55-242)||(11090879-11091066)
chr2 (55-242)||(1978468-1978655)
chr2 (57-242)||(239711-239896)
chr2 (55-216)||(26538464-26538625)
chr2 (56-242)||(3025822-3026006)
chr2 (59-235)||(8425358-8425533)
chr2 (58-242)||(14432500-14432684)
chr2 (59-216)||(11090524-11090680)
chr2 (55-216)||(239352-239511)
chr2 (55-216)||(22374319-22374479)
chr2 (54-216)||(40027138-40027299)
chr2 (46-216)||(40815731-40815900)
chr2 (54-216)||(26538095-26538256)
chr2 (55-216)||(1978107-1978267)
chr2 (55-216)||(18451217-18451377)
chr2 (56-182)||(28616613-28616739)
chr2 (53-182)||(20444746-20444875)
chr2 (56-216)||(43058333-43058492)
chr2 (59-216)||(14432145-14432301)
chr2 (55-174)||(28847122-28847241)
chr2 (62-216)||(3025472-3025624)
chr2 (59-216)||(8425746-8425902)
chr2 (55-171)||(20440461-20440577)
chr2 (54-213)||(7446340-7446497)
chr2 (57-171)||(35781093-35781207)
chr2 (56-182)||(35779708-35779834)
chr2 (58-182)||(8972239-8972363)
chr2 (58-173)||(15552482-15552596)
chr2 (58-169)||(15551501-15551612)
chr2 (55-216)||(28143417-28143576)
chr2 (53-215)||(31797166-31797326)
chr2 (55-216)||(44219643-44219803)
chr2 (55-216)||(14942231-14942393)
chr2 (56-216)||(4355755-4355914)
chr2 (55-216)||(20128124-20128284)
chr2 (5-55)||(25473018-25473068)
chr2 (52-216)||(42192629-42192793)
chr2 (55-216)||(62956-63116)
chr2 (56-216)||(42192240-42192399)
chr2 (59-130)||(3822924-3822995)
chr2 (57-216)||(16953321-16953479)
chr2 (59-216)||(33920615-33920771)
chr2 (53-216)||(38008338-38008500)
chr2 (53-216)||(43160397-43160560)
chr2 (55-216)||(43216096-43216256)
chr2 (55-216)||(11540025-11540185)
chr2 (51-101)||(44220146-44220196)
chr2 (155-216)||(5560937-5560998)
chr2 (155-216)||(13399520-13399581)
chr2 (175-216)||(15550793-15550833)
chr2 (180-216)||(4356143-4356179)
chr2 (180-216)||(4809002-4809038)
[»] scaffold0951 (2 HSPs)
scaffold0951 (55-240)||(2028-2213)
scaffold0951 (48-216)||(1659-1826)
[»] scaffold0417 (2 HSPs)
scaffold0417 (56-235)||(10989-11168)
scaffold0417 (75-216)||(10640-10780)
[»] scaffold0007 (5 HSPs)
scaffold0007 (51-242)||(64664-64855)
scaffold0007 (54-216)||(64300-64461)
scaffold0007 (58-216)||(205755-205911)
scaffold0007 (144-216)||(205038-205109)
scaffold0007 (54-153)||(210786-210885)
[»] scaffold0157 (2 HSPs)
scaffold0157 (73-242)||(16855-17024)
scaffold0157 (124-216)||(16564-16655)
[»] scaffold1223 (2 HSPs)
scaffold1223 (56-216)||(1126-1286)
scaffold1223 (58-216)||(755-911)
[»] scaffold0027 (2 HSPs)
scaffold0027 (54-216)||(42167-42329)
scaffold0027 (55-216)||(42545-42704)
[»] scaffold0295 (2 HSPs)
scaffold0295 (55-216)||(4792-4952)
scaffold0295 (58-236)||(5160-5334)
[»] scaffold0273 (2 HSPs)
scaffold0273 (95-242)||(4242-4389)
scaffold0273 (55-216)||(4593-4753)
[»] scaffold0019 (1 HSPs)
scaffold0019 (55-216)||(134059-134219)
[»] scaffold0432 (2 HSPs)
scaffold0432 (59-242)||(9935-10116)
scaffold0432 (59-216)||(10259-10414)
[»] scaffold0176 (2 HSPs)
scaffold0176 (52-216)||(18831-18993)
scaffold0176 (56-153)||(19069-19166)
[»] scaffold1585 (1 HSPs)
scaffold1585 (57-181)||(568-692)
[»] scaffold0113 (1 HSPs)
scaffold0113 (53-170)||(28674-28791)
[»] scaffold0076 (1 HSPs)
scaffold0076 (59-159)||(8451-8551)
[»] scaffold1696 (1 HSPs)
scaffold1696 (60-172)||(454-565)
[»] scaffold0057 (2 HSPs)
scaffold0057 (59-182)||(61877-62000)
scaffold0057 (55-130)||(61027-61102)
[»] scaffold0168 (1 HSPs)
scaffold0168 (106-182)||(7707-7783)
[»] scaffold0712 (1 HSPs)
scaffold0712 (175-216)||(6778-6818)
[»] scaffold0709 (1 HSPs)
scaffold0709 (175-216)||(6796-6836)


Alignment Details
Target: chr8 (Bit Score: 178; Significance: 4e-96; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 45 - 242
Target Start/End: Complemental strand, 13225195 - 13224998
Alignment:
Q  45 caaaagttaaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaatt 144  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  13225195 caaaaattaaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaatt 13225096  T
Q  145 atcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  13225095 atcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 13224998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 55 - 242
Target Start/End: Original strand, 19176289 - 19176476
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19176289 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 19176388  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||    
T  19176389 ttgcatttttcgtccgacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctacccatatgct 19176476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 57 - 242
Target Start/End: Complemental strand, 31133764 - 31133579
Alignment:
Q  57 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31133764 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgtt 31133665  T
Q  157 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| | |||||||    
T  31133664 gcatttttcgtcatacctcctattttcaaactccagaaatgcagagaaatgacggttttatgcggttttagacctatctctatgct 31133579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 56 - 242
Target Start/End: Complemental strand, 41681679 - 41681493
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  41681679 ggcttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgt 41681580  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||    
T  41681579 tgcatttttcgtcctacctgctattttcaaactccagaaacgcagagaaatggtagttttaggcggttttagacctacccctatgct 41681493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 54 - 242
Target Start/End: Original strand, 44831245 - 44831433
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  44831245 aaggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcattttt 44831344  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||| ||||||||||    
T  44831345 gttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttaggcggttttagacctgcccctatgct 44831433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 59 - 242
Target Start/End: Original strand, 9928912 - 9929095
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    |||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 9929011  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||    
T  9929012 atttttcgtcctacctccttttttcaaactccagaaacgcagagaaatgtcagttttaggcggttttagacctacccttatgct 9929095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 52 - 242
Target Start/End: Complemental strand, 11657006 - 11656816
Alignment:
Q  52 taaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||| |||||||||||||||||||    
T  11657006 taaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcattt 11656907  T
Q  152 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||| || ||||||||||||||||||    
T  11656906 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatagcagttttaggcgattgtagacctacccctatgct 11656816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 59 - 242
Target Start/End: Complemental strand, 12572393 - 12572210
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    |||||||||||||||||||||||||||||| ||||||||||||||  || ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12572393 ttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12572294  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||| |||||||||||||    
T  12572293 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaattgcagttttaggcggttttagatctacccctatgct 12572210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 55 - 242
Target Start/End: Original strand, 33742921 - 33743107
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||| ||||| |||||||||||||||||    
T  33742921 aggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaacaaa-cggtctttcaattatcatttttg 33743019  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
     ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  33743020 atgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttaggcagttttagacctacccctatgct 33743107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 58 - 242
Target Start/End: Complemental strand, 33328683 - 33328499
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||  || ||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  33328683 cttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttg 33328584  T
Q  158 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||    
T  33328583 catttttcgtcccacctcccattttcaaactccagaaacgcagagaaatggcagttttaggcggttttaaacctacccctatgct 33328499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 55 - 215
Target Start/End: Complemental strand, 34541094 - 34540934
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||| ||||||||||||||||||||||    
T  34541094 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttg 34540995  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 215  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||    
T  34540994 ttgcatttttcgtcctacctcctattttcaaacttaagaaacgcagagaaatgatagtttt 34540934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 41681133 - 41681292
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41681133 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 41681232  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  41681233 ttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagtttta 41681292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 19176836 - 19176676
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19176836 aggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 19176737  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||||| ||||||||||||||    
T  19176736 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagacaaatgacagtttta 19176676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 54 - 216
Target Start/End: Original strand, 33328156 - 33328317
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  33328156 aaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcattttt 33328255  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||||  | ||||| |  ||||| ||||||| ||||||||||||||||    
T  33328256 gttgcatttttcgtcctaccctcgatttt-attctccaaaaacgcaaagaaatgacagtttta 33328317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 12571862 - 12572023
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||| |||||||||||||||||    
T  12571862 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatcatttttg 12571961  T
Q  155 ttgcatttttcgtccta-cctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||| || || ||||| |  ||||| ||||||||||||||||||||||||    
T  12571962 ttgcatttttcgtcctaaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 12572023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 55 - 211
Target Start/End: Original strand, 4629796 - 4629952
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||| |||||||  | ||||||||||||| || ||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||     
T  4629796 aggcttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatcattttta 4629895  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacag 211  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  4629896 ttgcatttttcgtcttacctcctattttcaaactccagaaacgcaaagaaatgacag 4629952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 52 - 216
Target Start/End: Complemental strand, 9930206 - 9930043
Alignment:
Q  52 taaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 151  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||| ||||||||    
T  9930206 taaaggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcattt 9930107  T
Q  152 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||||||||| || ||||| |  ||||| || ||||||||||||| |||||||    
T  9930106 ttgttgcatttttcgtcctaccccccatttt-attctccaaaagcgcagagaaatgatagtttta 9930043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 11656454 - 11656615
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||| ||||||||    
T  11656454 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccatttttg 11656553  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactcc-agaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||| || ||||| |  |||| | ||||||||||||||| ||||||||    
T  11656554 ttgcatttttcgtcctaccccccatttt-attctccaaaaaacgcagagaaatggcagtttta 11656615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 31133219 - 31133379
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||| |||||||| ||||||||| |||||||||||    
T  31133219 aggcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcatttttg 31133318  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||| ||||||||||||||||||    
T  31133319 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 31133379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 44831791 - 44831631
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||  |||||||||||||||||    
T  44831791 aggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattatcatttttg 44831692  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||| |||||||| || ||||| |  ||||| |||| |||||||||||||||||||    
T  44831691 ttgcatttttggtcctaccccccatttt-attctccaaaaacacagagaaatgacagtttta 44831631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 56 - 216
Target Start/End: Complemental strand, 9178180 - 9178022
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||    
T  9178180 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcatttttgt 9178081  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||| || |||| || ||||| |  ||| | |||||||||||||||||| |||||    
T  9178080 tgcatttttcatcttacc-cccatttt-attctcaaaaaacgcagagaaatgacaatttta 9178022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 60 - 216
Target Start/End: Original strand, 13224645 - 13224799
Alignment:
Q  60 taattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgca 159  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||  ||||||||||||||||||||||| |    
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaacaatccttcaattatcatttttgttgaa 13224743  T
Q  160 tttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  13224744 tttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 13224799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 55 - 164
Target Start/End: Complemental strand, 11337068 - 11336959
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||| || ||| ||||||||||||||||| ||||||||| |||||||||||||||||    
T  11337068 aggcttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcatttttg 11336969  T
Q  155 ttgcattttt 164  Q
    ||||||||||    
T  11336968 ttgcattttt 11336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 148 - 242
Target Start/End: Original strand, 9177724 - 9177818
Alignment:
Q  148 atttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||||| ||| |||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  9177724 atttttgttgcatttttcatcccacctcccattttcaaactccagaaacgaagagaaatgacagttttaggcggttttagacctacccctatgct 9177818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 8074098 - 8073985
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    |||||||| ||| |||||||||||||||||||||||||| |||||||| ||||| || ||||||||||||||||||||   |||||||||||||| ||||    
T  8074098 aaggcttagttatacttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatca-tttt 8074000  T
Q  154 gttgcatttttcgtc 168  Q
    |||||||||| ||||    
T  8073999 gttgcattttacgtc 8073985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 216
Target Start/End: Complemental strand, 33743412 - 33743305
Alignment:
Q  108 ctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatg 207  Q
    ||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||     
T  33743412 ctgcctttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaata 33743314  T
Q  208 acagtttta 216  Q
    |||||||||    
T  33743313 acagtttta 33743305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 4630328 - 4630178
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    ||||||||||||||| || ||||||||||| |||||||||||| || ||||||  ||||||||||||| | ||||||||||||||||      |||||||    
T  4630328 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaatta------ttgttgc 4630235  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||| ||||||| || ||||| |  ||||| ||||||||| ||||||||||||||    
T  4630234 atttttcatcctaccccccatttt-attctccaaaaacgcagaaaaatgacagtttta 4630178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 182
Target Start/End: Original strand, 10918129 - 10918252
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    ||||||||| |||| ||||||||||||||  |||||||||||| || || ||||   |||||||||| |||||  ||||||||| |||||||||||||||    
T  10918129 ttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatcatttttgttgc 10918228  T
Q  159 atttttcgtcctacctcctatttt 182  Q
    ||||||| || |||| || |||||    
T  10918229 atttttcatcataccccccatttt 10918252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 35427359 - 35427199
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||||||||  ||||| || |||||||||| || | || ||  ||| |||| ||||||||  |||| | |||||| || |||     
T  35427359 aggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttctacctcttttaaaccgaacaaaatcgtccctaaattat-atatttt 35427261  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| |||| |||| | ||||   |||| ||||||| ||||||| ||||||||||||||||    
T  35427260 ttgcagttttagtcccatctccctatttccaactccataaacgcacagaaatgacagtttta 35427199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 182
Target Start/End: Original strand, 43958264 - 43958311
Alignment:
Q  135 tccttcaattatcatttttgttgcatttttcgtcctacctcctatttt 182  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||    
T  43958264 tccttcaattatcatttttgttgcatttttcgtcctaccctctatttt 43958311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 216
Target Start/End: Complemental strand, 28254971 - 28254813
Alignment:
Q  57 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||||||||||||||| |  ||||| || |||||||||| || |||| || |||||||| | ||||||||  |||| | || ||| ||  || |    
T  28254971 gcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatc-gaacaaaatcgtccctaaactat-ataatttt 28254874  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  28254873 tgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 28254813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 18805267 - 18805321
Alignment:
Q  161 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||| |||||||||||||| ||||| |||||||||| |||||||||||||||||||    
T  18805267 ttttagtcctacctcctatcttcaa-ctccagaaacacagagaaatgacagtttta 18805321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 89
Target Start/End: Original strand, 9177666 - 9177700
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggc 89  Q
    |||||||||||||||||||||||||||||||||||    
T  9177666 aggcttaattacacttttggtcctcgtgttttggc 9177700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 10919733 - 10919691
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactca 96  Q
    |||||||||||| ||||||||||||||||||||| ||||||||    
T  10919733 aaggcttaattatacttttggtcctcgtgttttgacctactca 10919691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 216
Target Start/End: Original strand, 18049590 - 18049750
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||| ||||||||||||||||||    ||||| || |||||||||| || | ||  | |||| |||  ||||||||  |||||| || |||   |||| |    
T  18049590 ggctcaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 18049689  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  18049690 tgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 18049750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 216
Target Start/End: Complemental strand, 18428311 - 18428148
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 152  Q
    ||||| ||||||||||||||||||||    ||||| || |||||||||| || ||||  | |||| |||  ||||||||  |||||| || |||   |||    
T  18428311 aaaggtttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttt 18428212  T
Q  153 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    | ||||| ||||  ||||| ||||   |||| ||||||||||||||| | ||||||||||||||    
T  18428211 ttttgcagttttactcctatctccctatttccaactccagaaacgcacaaaaatgacagtttta 18428148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 43958211 - 43958260
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatc 107  Q
    |||||||| |||||||||| ||||||||||  |||||||||||| |||||    
T  43958211 cttaattatacttttggtcttcgtgttttgatctactcacgaaattgatc 43958260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 28877438 - 28877390
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaa 101  Q
    ||||| ||||||||||||||||||||||  ||||| || ||||||||||    
T  28877438 aaaggtttaattacacttttggtcctcgcattttgaccaactcacgaaa 28877390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 176; Significance: 7e-95; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 55 - 242
Target Start/End: Complemental strand, 19591071 - 19590884
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19591071 aggcttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 19590972  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19590971 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 19590884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 45 - 242
Target Start/End: Original strand, 32004603 - 32004800
Alignment:
Q  45 caaaagttaaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaatt 144  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  32004603 caaaaattataggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaatt 32004702  T
Q  145 atcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  32004703 atcatttttgttgcatttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagttttaagcggttttagacctacccctatgct 32004800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 55 - 242
Target Start/End: Complemental strand, 38859187 - 38859000
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  38859187 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttg 38859088  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||    
T  38859087 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttaggcggttttagacctgcccctatgct 38859000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 55 - 242
Target Start/End: Complemental strand, 37787313 - 37787126
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  37787313 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcatttttg 37787214  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||    
T  37787213 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttttggcagttttagacctacccctatgct 37787126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 52 - 242
Target Start/End: Complemental strand, 19830968 - 19830779
Alignment:
Q  52 taaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||| ||||||||||| |||||||||||||||    
T  19830968 taaaggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcattt 19830869  T
Q  152 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  19830868 ttgttgcattttt-gtcctacctcctattttcaaactccagaaacacagagaaatgacagttttaggcggttttagacctacccctatgct 19830779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 56 - 242
Target Start/End: Original strand, 35288903 - 35289089
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  35288903 ggcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 35289002  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  35289003 tgcatttttcgtcctacttcatattttcaaactccagaaacacagagaaatgacagttttaagcggttttagacctacccctatgct 35289089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 55 - 242
Target Start/End: Original strand, 2658838 - 2659025
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  2658838 aggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 2658937  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||| || ||||||||||||| ||||||||    
T  2658938 ttgcatttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagttttaggccgttttagacctacacctatgct 2659025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 69 - 242
Target Start/End: Original strand, 29099863 - 29100036
Alignment:
Q  69 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 29099962  T
Q  169 ctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||||| |  |||||||||||||| |||||||    
T  29099963 ctacctcctattttcaaaccccagaaacgtagataaatgacagttttaggaagttttagacctacctctatgct 29100036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 55 - 242
Target Start/End: Original strand, 34533790 - 34533977
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||| |||| |||| |||||||||||||||||    
T  34533790 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcatttttg 34533889  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||| || ||||||||||||||||||||||    
T  34533890 ttgcattttccgtcctacctcctattttcaaactccaaaaacgcagagaaatgacacttttaggcagttttagacctacccctatgct 34533977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 59 - 242
Target Start/End: Complemental strand, 4641983 - 4641803
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    |||||||||||||||||||||||||||||||||||||||   |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4641887  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    || ||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||| |||||||    
T  4641886 atatttcgtcctacgtcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacatacctctatgct 4641803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 55 - 239
Target Start/End: Original strand, 23952729 - 23952914
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcc-tactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||     
T  23952729 aggcttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttg 23952828  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctat 239  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||| || |||||| ||||||||||||    
T  23952829 gttgcatttttcgtcctaccttctattttcaaaccccagaaacgcagagaaatgatagttttaggcagttttaaacctacccctat 23952914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 52 - 216
Target Start/End: Original strand, 37786763 - 37786926
Alignment:
Q  52 taaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 151  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  37786763 taaaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcattt 37786862  T
Q  152 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  37786863 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 37786926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 19830423 - 19830579
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19830423 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19830522  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  19830523 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 19830579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 56 - 216
Target Start/End: Original strand, 19590525 - 19590684
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19590525 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 19590624  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||| ||||||| || ||||| |  ||||| |||| |||||||||||||||||||    
T  19590625 tgcatttttcatcctaccccccatttt-attctccaaaaacccagagaaatgacagtttta 19590684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 34534337 - 34534177
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34534337 aggcttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcatttttg 34534238  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||| || ||||| |  ||||| |||  |||||||||||||||||||    
T  34534237 ttgcatttttcgtcctaccccccatttt-attctccaaaaaaacagagaaatgacagtttta 34534177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 52 - 216
Target Start/End: Original strand, 38858639 - 38858802
Alignment:
Q  52 taaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 151  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||    
T  38858639 taaaggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcattt 38858738  T
Q  152 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||| |||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  38858739 ttgttgcatttttggtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 38858802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 35289447 - 35289287
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |    
T  35289447 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttgg 35289348  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||| |||| || ||||| |  ||| | |||||||||||||| | |||||||    
T  35289347 ttgcatttttcgtcataccccccatttt-attctctaaaaacgcagagaaataatagtttta 35289287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 56 - 216
Target Start/End: Complemental strand, 32005159 - 32005000
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||| || ||||||||||||| ||||||||||||||||| |||||||||||||||    
T  32005159 ggcttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatttttgt 32005060  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||||  || ||||| |  ||||| ||||||||||||||||||||||||    
T  32005059 tgcatttttcgtcctactccccatttt-attctccaaaaacgcagagaaatgacagtttta 32005000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 53 - 216
Target Start/End: Complemental strand, 29100399 - 29100237
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 152  Q
    ||||| |||||||||||||||||||||||||||||| |||||||| ||| || ||||||||||||||||||||||||||||||| |||||||||||||||    
T  29100399 aaaggtttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttt 29100300  T
Q  153 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||| |||||||| || ||||| |  ||||| |||||||||||||| |||||||||    
T  29100299 tgttgcattttttgtcctaccccccatttt-attctccaaaaacgcagagaaataacagtttta 29100237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 2659386 - 2659226
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||| |||||||||||| ||||||||||| ||| ||||||| || |||||||||||||||||||||||||||| |||||||||||||||||    
T  2659386 aggcttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 2659287  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||| ||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  2659286 ttgcatttttcatcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 2659226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 54 - 216
Target Start/End: Original strand, 4641438 - 4641599
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||| ||||| |||||||||||| ||||||||||||||||    
T  4641438 aaggtttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcattttt 4641537  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||||||| || ||||| |  ||||| ||| |||||||||||| |||||||    
T  4641538 gttgcatttttcgtcctaccccccatttt-attctccaaaaatgcagagaaatgatagtttta 4641599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 62 - 216
Target Start/End: Complemental strand, 23953268 - 23953115
Alignment:
Q  62 attacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 161  Q
    |||||| |||||||||||||||||||  ||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 23953169  T
Q  162 tttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||| |||| || ||||| |  ||||| |||||||||||||| |||||||||    
T  23953168 tttcgtcataccccccatttt-attctccaaaaacgcagagaaataacagtttta 23953115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 55 - 172
Target Start/End: Original strand, 38160950 - 38161067
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||  ||||||||||||| |||||||    
T  38160950 aggcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattatttttg 38161049  T
Q  155 ttgcatttttcgtcctac 172  Q
    ||||||||||||||||||    
T  38161050 ttgcatttttcgtcctac 38161067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 4478242 - 4478086
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    |||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| || |  |||||||||||||||||||||||||    
T  4478242 ttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcatttttgttgc 4478143  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||| || | |||  ||| |  ||||| |||||||||||||| |||||||||    
T  4478142 atttttcgtcttatc-cctcattttattctccaaaaacgcagagaaataacagtttta 4478086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 55 - 182
Target Start/End: Original strand, 28583438 - 28583565
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||| || | || | |||||||||||||||| || ||||| ||||||||||||||||||||     
T  28583438 aggcttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcattttta 28583537  T
Q  155 ttgcatttttcgtcctacctcctatttt 182  Q
    ||||||||||||||||||| || |||||    
T  28583538 ttgcatttttcgtcctaccccccatttt 28583565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 57 - 182
Target Start/End: Complemental strand, 28584466 - 28584341
Alignment:
Q  57 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 156  Q
    |||||||||||||||| ||||||||| ||||||||| |||||||| || || || ||||||||||||||||||||  |||||||||||||||||||||||    
T  28584466 gcttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgtt 28584367  T
Q  157 gcatttttcgtcctacctcctatttt 182  Q
    | |||||||||| |||| || |||||    
T  28584366 gtatttttcgtcttaccccccatttt 28584341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 242
Target Start/End: Original strand, 4477800 - 4477887
Alignment:
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||  |  ||||||||||||||||||||||    
T  4477800 ttgcagttttagtcctacctcctattttcaaactccagaaacgcagggaaatgacagtttttggtagttttagacctacccctatgct 4477887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 216
Target Start/End: Complemental strand, 34595320 - 34595159
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgc-ccttttaaaacagaacaaaacggtccttcaattatcatttt 152  Q
    ||||||||||||||||||||||||||   ||||| || |||||||||| || ||||||  |||||||| | ||||||||  |||| | || |||||| ||    
T  34595320 aaggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctgcatcttttaaatc-gaacaaaatcgtccctaaactatcatgtt 34595222  T
Q  153 tgttgcatttttcgtcctacctcc-tattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    | ||||| |||| || ||||| || ||||||| ||||||||||||||| ||||||||||||||||    
T  34595221 t-ttgcagttttagtgctacccccttattttc-aactccagaaacgcacagaaatgacagtttta 34595159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 216
Target Start/End: Original strand, 9181534 - 9181691
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    |||||||||||||||||||||    ||||| || |||||||||| || ||||  | |||| |||  ||||||||  |||||| || ||| |||||| |||    
T  9181534 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-attttttttg 9181632  T
Q  158 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    || |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  9181633 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 9181691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 9393738 - 9393914
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    |||||||||||||||| ||||||  |||||  |  ||||||||| |  || ||||  ||| |||  ||||||||| |||||  || |||||| ||| |||    
T  9393738 cttaattacacttttgatcctcgcattttgatcagctcacgaaaattgtcttgcctctttcaaatcgaacaaaaccgtccta-aactatcatgttttttg 9393836  T
Q  158 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccc 236  Q
    |  |||| |||||||||||||||||||| |||||||||| ||| ||||||||||||||| ||  || ||||||||||||    
T  9393837 ctgttttagtcctacctcctattttcaa-ctccagaaacacagtgaaatgacagttttaagcaattatagacctacccc 9393914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 195
Target Start/End: Original strand, 49064030 - 49064171
Alignment:
Q  52 taaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 151  Q
    |||||||||||||||||||||||||||||| ||||| ||  ||||||||| || |  ||||  ||| ||| |||||||||   ||| | || |||||| |    
T  49064030 taaaggcttaattacacttttggtcctcgtattttgaccagctcacgaaaatggtattgcctctttcaaatagaacaaaatcttccataaactatcatgt 49064129  T
Q  152 ttgttgcatttttcgtcctacctcctattttcaaactccagaaa 195  Q
    || ||||| |||| |||||| ||||||||||| |||||||||||    
T  49064130 tt-ttgcacttttagtcctaactcctattttc-aactccagaaa 49064171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 35578902 - 35579057
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    |||||||||||||||||| | |  ||||| ||  ||||| ||| || |||||||  ||| |||  ||||||||| ||| |  || |||||| ||| ||||    
T  35578902 ttaattacacttttggtcattgcattttgaccagctcacaaaaatggtcctgccactttcaaatcgaacaaaaccgtcata-aactatcatgttttttgc 35579000  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    | ||||  |||||| |||||||||||| |||||||||||||||||||||||| |||||    
T  35579001 agttttaatcctacatcctattttcaa-ctccagaaacgcagagaaatgacattttta 35579057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 25637741 - 25637585
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    ||||||||||||||||||||    ||||| || |||||||||| || ||||  | |||| |||  ||||||||  |||||| || ||| || ||| ||||    
T  25637741 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 25637643  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    | |||| |||||| ||||   |||| |||||||||||| || ||||||||||||||||    
T  25637642 agttttagtcctatctccctatttccaactccagaaacacacagaaatgacagtttta 25637585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 216
Target Start/End: Original strand, 27245203 - 27245363
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||||| |  ||||| || |||||||||| || |||| || |||||||| | ||||||||  ||||   ||  ||   ||||     
T  27245203 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatc-gaacaaaatcgtccccaaaccatatgttttt 27245301  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| |||| |||||| |||||  |||| ||||||||||||||| |||||||| |||||||    
T  27245302 ttgcagttttagtcctatctccttatttccaactccagaaacgcacagaaatgatagtttta 27245363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 48248139 - 48247978
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||||||    ||||| || |||||| ||| || ||||  | |||| |||  ||||||||  |||||| || |||   ||||     
T  48248139 aggcttaattacacttttggtcctaccattttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 48248040  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| |||| |||| | ||||   |||| ||||||||||||||| ||||||||||||||||    
T  48248039 ttgcagttttagtcccatctccctatttccaactccagaaacgcacagaaatgacagtttta 48247978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 216
Target Start/End: Complemental strand, 35579430 - 35579273
Alignment:
Q  57 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    ||||||||||||||||| ||||||  |||||  |  ||||||||| ||||  |||| |||| ||| || |||||||| |||||  || |||||| ||| |    
T  35579430 gcttaattacacttttgatcctcgcattttgatcagctcacgaaaatgattatgcctctttcaaatca-aacaaaaccgtccta-aactatcatgttttt 35579333  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||| |||| ||| |||||||||||||| ||||| | |||||||| ||||| |||||||||    
T  35579332 tgcagttttagtcatacctcctattttc-aactctaaaaacgcagggaaataacagtttta 35579273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 7732487 - 7732647
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    ||||||||||||| |||||||||| |  |||||  | |||||||||| || |||| || |||||||| | ||||||||  |||||| || ||| || |||    
T  7732487 aggcttaattacatttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatc-gaacaaaatcgtccttaaactat-atgttt 7732584  T
Q  154 gttgcatttttcgtcctacct-cctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
     ||||| |||| |||||| || ||||||||| ||||||| ||||||| | ||||||||||||||    
T  7732585 tttgcagttttagtcctatctccctattttc-aactccataaacgcacataaatgacagtttta 7732647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 26026320 - 26026477
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    |||||||||||||||||||| || ||||| ||  ||||||||| || || | || |||||||| | ||||||||  |||| | || |||   |||| |||    
T  26026320 ttaattacacttttggtccttgtattttgaccagctcacgaaattggtcatacctcttttaaatc-gaacaaaatcgtccataaactatatgtttttttg 26026418  T
Q  158 catttttcgtcctacctcc-tattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    || |||| ||| || |||| ||||||||| ||||||||||||| ||||||||||||||||    
T  26026419 cagttttagtcttatctccctattttcaa-ctccagaaacgcacagaaatgacagtttta 26026477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 32427461 - 32427407
Alignment:
Q  161 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||| ||||| |||||||||||||| ||| | ||||||||||||||||||||||||    
T  32427461 ttttagtccttcctcctattttcaa-ctctaaaaacgcagagaaatgacagtttta 32427407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 120
Target Start/End: Complemental strand, 39137081 - 39137014
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaa 120  Q
    |||||||||||||||||||| ||||||| ||||| ||  ||||||||| || ||||||| ||||||||    
T  39137081 aaggcttaattacacttttgatcctcgtattttgacccgctcacgaaaatggtcctgcctcttttaaa 39137014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 206
Target Start/End: Complemental strand, 7733036 - 7732884
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 152  Q
    ||||||||||||||||||||||||||    ||||| || |||||||||| |||||||  | |||| |||  ||||||||  |||||| || ||| || ||    
T  7733036 aaaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtt 7732938  T
Q  153 tgttgcatttttcgtcctacct-cctattttcaaactccagaaacgcagagaaat 206  Q
    | ||||| |||| |||||| || ||||||||| ||||||| ||| ||| ||||||    
T  7732937 ttttgcaattttagtcctatctccctattttc-aactccataaatgcacagaaat 7732884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 26048071 - 26048107
Alignment:
Q  180 tttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  26048071 tttccaactccagaaacgcacagaaatgacagtttta 26048107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 28687922 - 28687886
Alignment:
Q  180 tttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  28687922 tttccaactccagaaacgcacagaaatgacagtttta 28687886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 172; Significance: 2e-92; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 55 - 242
Target Start/End: Complemental strand, 22219899 - 22219712
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22219899 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 22219800  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  22219799 ttgcatttttcgttctacctcctattttcaaactccagaaactcagagaaatgacagttttaggcggttttagacctacccctatgct 22219712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 55 - 242
Target Start/End: Complemental strand, 11445533 - 11445346
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11445533 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttg 11445434  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  11445433 ttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacccacccctatgct 11445346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 55 - 242
Target Start/End: Original strand, 12935156 - 12935343
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12935156 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 12935255  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||  ||||||||||||    
T  12935256 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttaggcggttttagatatacccctatgct 12935343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 52 - 242
Target Start/End: Complemental strand, 20741653 - 20741460
Alignment:
Q  52 taaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcat-- 149  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  20741653 taaaggcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 20741554  T
Q  150 -ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
     |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  20741553 ttttttttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctacccctatgct 20741460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 55 - 242
Target Start/End: Complemental strand, 23075674 - 23075487
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  23075674 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 23075575  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||| |||||||||||||| |||||||| ||| |||||||||||||||||||| || ||||||||||||||| ||||||    
T  23075574 ttgcatttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttaggcagttttagacctacccttatgct 23075487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 10899942 - 10900099
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10899942 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10900041  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10900042 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 10900099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 54 - 242
Target Start/End: Original strand, 31470313 - 31470501
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| ||| ||||||||| ||||||    
T  31470313 aaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattattttt 31470412  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||    
T  31470413 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcgattttagacctacccctatgct 31470501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 59 - 242
Target Start/End: Original strand, 18504922 - 18505105
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||| |    
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtttc 18505021  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||| ||| |||||||||||||||||||||    
T  18505022 atttttcgtcctacctcctattttcaaactctagaaatgtagagaaatgacagttttaggcgattttagacctacccctatgct 18505105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 55 - 242
Target Start/End: Original strand, 2319671 - 2319857
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  2319671 aggcttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 2319770  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||| || ||||| |  |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  2319771 ttgcatttttcgtcctaccccccatttt-attctccagaaacgcagagaaatgatagttttaggcggttttagacctacccctatgct 2319857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 56 - 242
Target Start/End: Complemental strand, 18257682 - 18257496
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18257682 ggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgt 18257583  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    | |||||||||||||||||| ||||||| ||||||| | ||| |||||||||||||||||| |||||||||||||||||||||||||    
T  18257582 tacatttttcgtcctacctcatattttccaactccatacacgtagagaaatgacagttttaggcggttttagacctacccctatgct 18257496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 57 - 236
Target Start/End: Original strand, 15827639 - 15827819
Alignment:
Q  57 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaa--acggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| | ||| |||||||||||| ||||||  |||||||||||| |||||||||||    
T  15827639 gcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcatttttg 15827738  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccc 236  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||| ||||||    
T  15827739 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgaca-ttttaggcggttttagacttacccc 15827819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 53 - 216
Target Start/End: Original strand, 11276587 - 11276750
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 152  Q
    |||||||||||||||| ||| |||| |||||||||| ||||||| |||||||||||| ||||||||||||||||||||| |||||||||||| |||||||    
T  11276587 aaaggcttaattacacgtttagtccgcgtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtcatttt 11276686  T
Q  153 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11276687 tgtttcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagtttta 11276750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 18257136 - 18257296
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18257136 aggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 18257235  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||| |||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  18257236 ttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagtttta 18257296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 20741099 - 20741259
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||    
T  20741099 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcatttttg 20741198  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  20741199 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 20741259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 56 - 216
Target Start/End: Complemental strand, 10900475 - 10900316
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  10900475 ggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 10900376  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  10900375 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 10900316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 51 - 242
Target Start/End: Complemental strand, 4811806 - 4811616
Alignment:
Q  51 ttaaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 150  Q
    |||| |||||||||| ||||||| |||||||||||||||||||||| |||||||||| |||  |||||||||||||||||||||||||||||||||||||    
T  4811806 ttaatggcttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatt 4811707  T
Q  151 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||| || |||||||||||||||||| ||| ||||||||| ||||| || ||||| |  ||||||||||||||||||||||    
T  4811706 tttgttgcatttttcatcatacctcctattttcaaaccccataaacgcaga-aaatggcaattttaggtagttttagacctacccctatgct 4811616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 56 - 216
Target Start/End: Complemental strand, 11277127 - 11276968
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11277127 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 11277028  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||||| || ||||| |  ||||| ||||| ||||||||||||||||||    
T  11277027 tgcatttttcgtcctaccccccatttt-attctccaaaaacgaagagaaatgacagtttta 11276968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 54 - 216
Target Start/End: Complemental strand, 15828188 - 15828027
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||| |||||||||||||||||||||||||||||    
T  15828188 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcattttt 15828089  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||||||| || ||||| |  ||||| |||||||||||||| |||||||||    
T  15828088 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagtttta 15828027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 57 - 216
Target Start/End: Complemental strand, 31470860 - 31470702
Alignment:
Q  57 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 156  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31470860 gcttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 31470761  T
Q  157 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||| || ||||| |  ||||| |||||||||||||||||| |||||    
T  31470760 gcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacaatttta 31470702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 12935703 - 12935543
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||    
T  12935703 aggcttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcatttttg 12935604  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    || |||||||||||||||| || ||||| |  ||||| |||| |||||||||||||||||||    
T  12935603 ttacatttttcgtcctaccccccatttt-attctccataaacacagagaaatgacagtttta 12935543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 57 - 216
Target Start/End: Complemental strand, 18505463 - 18505305
Alignment:
Q  57 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 156  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  18505463 gcttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgtt 18505364  T
Q  157 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||| || ||||| |  |||||  |||| ||||||||||||||||||    
T  18505363 gcatttttcgtcctaccccccatttt-attctccaacaacgaagagaaatgacagtttta 18505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 28472636 - 28472795
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| || ||||||| |||||||||||||||||| |||| |||||||||||||||||    
T  28472636 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttg 28472735  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  28472736 ttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagtttta 28472795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 29859825 - 29859984
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| || ||||||| |||||||||||||||||| |||| |||||||||||||||||    
T  29859825 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttg 29859924  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  29859925 ttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagtttta 29859984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 56 - 216
Target Start/End: Complemental strand, 1149977 - 1149817
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||| || ||||||||||||| ||||||||||||||||||||||| |||||||||    
T  1149977 ggcttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatttttgt 1149878  T
Q  156 tgcatttttcgtcctacctcctattttcaaactcc-agaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||||| || ||||| |  |||| | ||||||||||||||||||||||||    
T  1149877 tgcatttttcgtcctaccccccatttt-attctccaaaaaacgcagagaaatgacagtttta 1149817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 11444986 - 11445146
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||| |||| ||||||||||||||||||||||    
T  11444986 aggcttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcatttttg 11445085  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||||||  | ||||| |  ||| | |||| |||||||||||||||||||    
T  11445086 ttgcatttttcgtcctaccctccatttt-attctctaaaaacacagagaaatgacagtttta 11445146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 2322760 - 2322605
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||  || |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2322760 ttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 2322661  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||| |||  ||| |  ||||| |||| |||||||||||||||||||    
T  2322660 atttttcgtcctacc-cctcattttattctcca-aaacacagagaaatgacagtttta 2322605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 54 - 153
Target Start/End: Original strand, 23073997 - 23074096
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  23073997 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcattttt 23074096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 53 - 182
Target Start/End: Original strand, 29033431 - 29033560
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 152  Q
    |||| |||||||||||||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||||||| |||||||| ||||||||||    
T  29033431 aaagacttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcatttt 29033530  T
Q  153 tgttgcatttttcgtcctacctcctatttt 182  Q
    |||||||  |||| ||||||| || |||||    
T  29033531 tgttgcacatttcatcctaccccccatttt 29033560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 56 - 216
Target Start/End: Original strand, 4811372 - 4811531
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    ||||||||||||||||||||||  || |||||| ||||||||||||||| || ||||||||||||| |||| ||||||||||||||||||||||||||||    
T  4811372 ggcttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgt 4811471  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    | ||||||||||| |||| || ||||| |  || || ||||||||| |||| |||||||||    
T  4811472 ttcatttttcgtcttaccccccatttt-attcttcaaaaacgcagataaataacagtttta 4811531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 55 - 144
Target Start/End: Original strand, 1149464 - 1149553
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaatt 144  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  1149464 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 18296144 - 18296262
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||| | |||| |||||||||||||| | ||||||| ||| ||||  |||||||||||||||||||||||| |||||||| ||||||||||||    
T  18296144 aggcttaattataattttagtcctcgtgttttgacttactcacaaaattgatattgcccttttaaaacagaacaaaaccgtccttcatttatcatttttg 18296243  T
Q  155 ttgcatttttcgtcctacc 173  Q
    |||||||||||||||||||    
T  18296244 ttgcatttttcgtcctacc 18296262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 54 - 182
Target Start/End: Complemental strand, 3835273 - 3835145
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    |||| |||||||||||||||||||  |||||||| ||||||||||||| || |||||||  |||||||||||||||||  |||||| |||||||||||||    
T  3835273 aaggtttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcattttt 3835174  T
Q  154 gttgcatttttcgtcctacctcctatttt 182  Q
    || ||||||||||||||||| || |||||    
T  3835173 gtggcatttttcgtcctaccccccatttt 3835145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 58 - 169
Target Start/End: Complemental strand, 29035180 - 29035069
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    ||||||||||||||| ||||||||||||| |||||||||||||| || |  |||||||||||||||||||||||  |||||| | |||||||||||||||    
T  29035180 cttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcatttttgttg 29035081  T
Q  158 catttttcgtcc 169  Q
    ||||||||||||    
T  29035080 catttttcgtcc 29035069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 216
Target Start/End: Complemental strand, 35163736 - 35163573
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaaacagaacaaaacggtccttcaattatca-tt 150  Q
    ||||||||||||||||||||||||| ||  ||||| ||  ||||||||| || | ||||| |||| ||| || |||||||  |||| | || |||   ||    
T  35163736 aaaggcttaattacacttttggtccccgcattttgaccagctcacgaaaatggttctgcctctttcaaatca-aacaaaatcgtccctaaactatatgtt 35163638  T
Q  151 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||| ||||| |||| |||||||||||||||||| ||||||| |||| |||||||||||||||||||    
T  35163637 ttttttgcagttttagtcctacctcctattttc-aactccaaaaacacagagaaatgacagtttta 35163573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 1149558 - 1149614
Alignment:
Q  186 actccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||| |||||||||  |||||||| ||| |||||||||||||||||||||    
T  1149558 actccagaaacacagagaaatagcagttttaggcgattttagacctacccctatgct 1149614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 112
Target Start/End: Complemental strand, 22534270 - 22534214
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc 112  Q
    |||||||||||||||||||||||||| ||||| || |||||||||| || |||||||    
T  22534270 ggcttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcctgcc 22534214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 32836114 - 32836179
Alignment:
Q  169 ctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctaccc 235  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||||||  |  ||||||||||||||    
T  32836114 ctacctcctattttcaa-ctcctgaaacacagagaaatgacagttttagacaattttagacctaccc 32836179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 31573817 - 31573884
Alignment:
Q  149 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  31573817 ttttttttgcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagtttta 31573884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 25468943 - 25469011
Alignment:
Q  149 tttttgttgcatttttcgtcctacctcc-tattttcaaactccagaaacgcagagaaatgacagttttat 217  Q
    ||||| ||||| |||| |||||| |||| |||||| ||| |||||||||||| |||||||||||||||||    
T  25468943 tttttcttgcagttttagtcctatctccctatttt-aaattccagaaacgcacagaaatgacagttttat 25469011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 216
Target Start/End: Complemental strand, 31073688 - 31073529
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||||| |  ||||| ||  ||||||||| || || | || |||||||| | ||||||||  |||| | || |||   |||||    
T  31073688 ggcttaattacacttttggtccttgcattttgaccagctcacgaaattggtcatacctcttttaaatc-gaacaaaattgtccctaaactatatgttttg 31073590  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    | ||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  31073589 t-gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 31073529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 28473041 - 28472997
Alignment:
Q  198 cagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||| |||||||||||||| | |||||||||||||||| ||||||    
T  28473041 cagaaaaatgacagttttagggggttttagacctacccatatgct 28472997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 28636619 - 28636583
Alignment:
Q  180 tttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  28636619 tttccaactccagaaacgcacagaaatgacagtttta 28636583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 31574274 - 31574226
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaa 101  Q
    |||||||||||||||||||||||||| |  ||||| || ||||||||||    
T  31574274 aaaggcttaattacacttttggtccttgcattttgaccaactcacgaaa 31574226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 184
Target Start/End: Original strand, 33095782 - 33095842
Alignment:
Q  124 gaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttca 184  Q
    ||||||||| |||| | || |||||| ||| ||||| |||| |||||||||||||||||||    
T  33095782 gaacaaaaccgtccctaaactatcatgttttttgcagttttagtcctacctcctattttca 33095842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 172; Significance: 2e-92; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 55 - 242
Target Start/End: Complemental strand, 8647984 - 8647797
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8647984 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 8647885  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8647884 ttgcatttttcgtcataccttctattttcaaactccataaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 8647797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 59 - 242
Target Start/End: Original strand, 5818932 - 5819115
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5818932 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 5819031  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5819032 atttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 5819115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 55 - 242
Target Start/End: Complemental strand, 19359682 - 19359495
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19359682 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 19359583  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||    
T  19359582 ttggatttttcgtcctacctcctattttcaaactccagaaacgtagagaaatggcagttttaggcggttttagacctacccctatgct 19359495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 54 - 242
Target Start/End: Complemental strand, 8461478 - 8461290
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  8461478 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcattttt 8461379  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  8461378 gctgcatttttcgtcatacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctacccctatgct 8461290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 58 - 242
Target Start/End: Original strand, 2864756 - 2864940
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2864756 cttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgttg 2864855  T
Q  158 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  2864856 catttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttaggcggttttagaactacccctatgct 2864940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 56 - 242
Target Start/End: Original strand, 164191 - 164376
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||| |||||||||||| ||||||||||||||| ||    
T  164191 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatcatttt-gt 164289  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  164290 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttatgcggttttagacctacccctatgct 164376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 58 - 240
Target Start/End: Original strand, 14215243 - 14215425
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |  | ||||||||||||||||||||| ||||||||| |||||||||||||||    
T  14215243 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgttg 14215342  T
Q  158 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatg 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14215343 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatg 14215425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 55 - 242
Target Start/End: Original strand, 24331558 - 24331747
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatca--tttt 152  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||   ||||    
T  24331558 aggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctattttt 24331657  T
Q  153 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  24331658 tgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 24331747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 59 - 242
Target Start/End: Original strand, 18182973 - 18183156
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18182973 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18183072  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||||||||||| | || |||||||||||||||||||||||||||| || ||||||| ||||||||||||||    
T  18183073 atttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttaggcagttttaggcctacccctatgct 18183156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 54 - 242
Target Start/End: Original strand, 29454738 - 29454926
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    ||||||||||| ||||||||||| | |||||||||||||||||||||| || || ||||||||||||||||||||||||||||||| |||||||||||||    
T  29454738 aaggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatcattttt 29454837  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||    
T  29454838 gctgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttaggcggttttagacctacccatatgct 29454926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 53 - 242
Target Start/End: Complemental strand, 25000637 - 25000448
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 152  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||| || || ||  ||||||||||||||||||| |||| |||||||||||||||    
T  25000637 aaaggcttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcatttt 25000538  T
Q  153 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||| |||||||||||||    
T  25000537 tgttgcatttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagttttagacggttttagatctacccctatgct 25000448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 59 - 242
Target Start/End: Complemental strand, 16019129 - 16018946
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| || |||||| ||||||||| |||| |||| ||| |||||||||||||||||||||     
T  16019129 ttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcatttttgttgt 16019030  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||    
T  16019029 atttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttagacggttttagatctacccctatgct 16018946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 56 - 235
Target Start/End: Complemental strand, 15709513 - 15709335
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    ||||||||||||||||||||| | ||||||||||||||||| ||||||  || |||||||| |||||||||||||||||||||| | ||||||||| |||    
T  15709513 ggcttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgcccttt-aaaacagaacaaaacggtcctttagttatcatttctgt 15709415  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctaccc 235  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||    
T  15709414 tgcatttttcgtcctacctcctattttcaaactccataagcgcagagaaatgacagttttaggcggttttagacctaccc 15709335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 2865301 - 2865141
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2865301 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 2865202  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    || |||||||||||||||| || ||||| |  ||||| ||||| ||||||||||||||||||    
T  2865201 tttcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 2865141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 18183515 - 18183355
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18183515 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 18183416  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||| |||  ||| |  ||||| |||||||||||||| |||||||||    
T  18183415 ttgcatttttcgtcctacc-cctcattttattctccaaaaacgcagagaaataacagtttta 18183355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 56 - 216
Target Start/End: Complemental strand, 5819474 - 5819315
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5819474 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 5819375  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||||| || ||||| |  ||||| ||||||| ||||||||||||||||    
T  5819374 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcaaagaaatgacagtttta 5819315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 56 - 216
Target Start/End: Original strand, 8647438 - 8647597
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  8647438 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttgt 8647537  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  8647538 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 8647597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 56 - 213
Target Start/End: Original strand, 19359136 - 19359292
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19359136 ggcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 19359235  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtt 213  Q
    |||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||    
T  19359236 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtt 19359292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 24362382 - 24362222
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  24362382 aggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcatttttg 24362283  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  24362282 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 24362222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 62 - 242
Target Start/End: Original strand, 24361843 - 24362022
Alignment:
Q  62 attacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 161  Q
    |||||||||||||||| | ||||||||||||| ||||||||||||| ||||||| ||||||||||||||| |||||||||| ||||||||||||||||||    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatt 24361942  T
Q  162 tttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||| || ||||| |  ||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  24361943 tttcgtcctaccccccatttt-attctccacaaacgcagagaaatgatagttttaggcggttttagacctacccctatgct 24362022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 58 - 242
Target Start/End: Original strand, 15371873 - 15372060
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    |||||||||||||||| ||||||| |||||| |||||||||||  || |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15371873 cttaattacacttttgatcctcgtattttggtctactcacgaat-tggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttg 15371971  T
Q  158 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttat----gcggttttagacctacccctatgct 242  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||||||||| |||||||     ||||||||||||||||| |||||||    
T  15371972 catttttcgtcccacctcctatttgcaaactctagaaacgcagagaaatgatagttttaattaggcggttttagacctacctctatgct 15372060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 54 - 216
Target Start/End: Complemental strand, 29455289 - 29455128
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  29455289 aaggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttt 29455190  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||| ||||||||||||||||||    
T  29455189 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 29455128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 14215789 - 14215629
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14215789 aggcttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttg 14215690  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||| || | || ||||| |  ||||| ||||| ||||||||||||||||||    
T  14215689 ttgcatttttcgtcttaacccccatttt-attctccaaaaacgtagagaaatgacagtttta 14215629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 15372415 - 15372259
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15372415 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 15372316  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||| || |||| ||| ||||| |   |||| ||||||||||||||||||||||||    
T  15372315 attttttgttctacatcccatttt-attttccaaaaacgcagagaaatgacagtttta 15372259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 15708970 - 15709129
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||    
T  15708970 aggcttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 15709069  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||| |||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  15709070 ttgcatatttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagtttta 15709129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 62 - 242
Target Start/End: Original strand, 24325218 - 24325397
Alignment:
Q  62 attacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 161  Q
    |||||||||||||||| | ||||||||||||| ||||||||||||| ||||||| ||||||||||||||| |||||||||| |||||||||||| |||||    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatt 24325317  T
Q  162 tttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||| || ||||| |  ||||| |||||||||||||||| |||||||  ||||||||||||||||||||||||    
T  24325318 tttcgtcctaccccccatttt-attctccacaaacgcagagaaatgatagttttagccggttttagacctacccctatgct 24325397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 8460929 - 8461089
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||| ||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8460929 aggcttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 8461028  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||| |||| || ||||| |  ||||| ||| ||||||||||||||||||||    
T  8461029 ttgcatttttcgtcataccccccatttt-attctccaaaaatgcagagaaatgacagtttta 8461089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 14464066 - 14463907
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||  || |||||||||| ||||||||||| |||||||||||||||||||     
T  14464066 aggcttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcattttta 14463967  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  14463966 ttgcatttttcgtcctacc-ccaatttt-attctccaaaaacgcagagaaatgacagtttta 14463907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 164737 - 164577
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||| | ||||| ||||| |||||||||| |||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  164737 aggcttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 164638  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||| |||||||| || ||||| |  ||||| ||| | ||||||||||||||||||    
T  164637 ttgcattttttgtcctaccccccatttt-attctccaaaaatgtagagaaatgacagtttta 164577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 16018585 - 16018705
Alignment:
Q  52 taaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 151  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  16018585 taaaggcttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattat-attt 16018683  T
Q  152 ttgttgcatttttcgtcctacc 173  Q
    || ||||||||| |||||||||    
T  16018684 ttattgcattttccgtcctacc 16018705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 56 - 182
Target Start/End: Complemental strand, 7349562 - 7349436
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| || |||||| ||||||||||| ||||||||  ||||||| |||||||||||||    
T  7349562 ggcttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttgt 7349463  T
Q  156 tgcatttttcgtcctacctcctatttt 182  Q
    |||| ||||| ||||||| || |||||    
T  7349462 tgcacttttcatcctaccccccatttt 7349436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 58 - 216
Target Start/End: Complemental strand, 24332107 - 24331946
Alignment:
Q  58 cttaattacactttt-ggtcctcgtgttttggcctactcacgaaactgatcctgccctttt-aaaacagaacaaaacggtccttcaattatcat-ttttg 154  Q
    ||||||||||||||| |||| || ||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||| |||||    
T  24332107 cttaattacactttttggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcattttttg 24332008  T
Q  155 ttgca-tttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| |||||||||||||| || ||| | |  ||||| ||||||||||||||||||||||||    
T  24332007 ttgcattttttcgtcctaccccccattct-attctccaaaaacgcagagaaatgacagtttta 24331946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 57 - 173
Target Start/End: Complemental strand, 4222266 - 4222150
Alignment:
Q  57 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 156  Q
    |||||||||||||||||||||||||||||||| || ||||||||| || || |||||||||||||||||||||||  ||| |||| ||||||||||| ||    
T  4222266 gcttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttatt 4222167  T
Q  157 gcatttttcgtcctacc 173  Q
    |||||||||||||||||    
T  4222166 gcatttttcgtcctacc 4222150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 56 - 182
Target Start/End: Original strand, 7348559 - 7348685
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||||| ||||||||||| |||||| | |||||||||||| || || ||||||||||||||||||||||||  ||||||  |||||||||||||    
T  7348559 ggcttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatcatttttgt 7348658  T
Q  156 tgcatttttcgtcctacctcctatttt 182  Q
    |||| ||||||||||||| || |||||    
T  7348659 tgcacttttcgtcctaccccccatttt 7348685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 56 - 173
Target Start/End: Original strand, 4623148 - 4623265
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||| || |||||||  |||||||||||||||||  |||||||||||||||||||| |    
T  4623148 ggcttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatcatttttat 4623247  T
Q  156 tgcatttttcgtcctacc 173  Q
     ||||||| |||||||||    
T  4623248 ggcattttccgtcctacc 4623265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 62 - 182
Target Start/End: Complemental strand, 6019309 - 6019189
Alignment:
Q  62 attacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat- 160  Q
    |||||| |||||||| || ||||||||| ||||||||||||||||| ||| |||||||||||||||||||| ||| || ||||||||||||||||||||     
T  6019309 attacatttttggtcatcatgttttggc-tactcacgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcatttttgttgcatt 6019211  T
Q  161 ttttcgtcctacctcctatttt 182  Q
    |||||||||||||||| |||||    
T  6019210 ttttcgtcctacctcccatttt 6019189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 78 - 216
Target Start/End: Original strand, 25000112 - 25000249
Alignment:
Q  78 tcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcct 177  Q
    |||||||||||||||||||||||  || || |||||| ||||||||||| |||| ||||||| ||||||||||||| |||||||||| |||||||| ||     
T  25000112 tcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctacccccc 25000211  T
Q  178 attttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| |  ||||| ||||| ||||||||||||||||||    
T  25000212 atttt-attctccaaaaacgtagagaaatgacagtttta 25000249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 51 - 184
Target Start/End: Original strand, 6018309 - 6018441
Alignment:
Q  51 ttaaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 150  Q
    ||||| ||||||||||| ||||||| |||||||||||  ||||||||||||||| || || ||||||||||||||||||||   | ||||||||||||||    
T  6018309 ttaaatgcttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaattat-cttcaattatcatt 6018407  T
Q  151 tttgttgcatttttcgtcctacctcctattttca 184  Q
    ||||||||| |||| ||||||||  |||||||||    
T  6018408 tttgttgcagttttagtcctaccctctattttca 6018441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 56 - 173
Target Start/End: Original strand, 4219663 - 4219780
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||||||||||| |||||||||||||| ||| | || ||| || || |||| |||||||||||||||||   |||||| | |||||||||||||    
T  4219663 ggcttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttttgt 4219762  T
Q  156 tgcatttttcgtcctacc 173  Q
    ||||||||||||||||||    
T  4219763 tgcatttttcgtcctacc 4219780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 14462686 - 14462768
Alignment:
Q  138 ttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactc----cagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||| ||||||||||||||||||    
T  14462686 ttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagacagaaacgtagagaaatgacagtttta 14462768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 239
Target Start/End: Original strand, 10721873 - 10721967
Alignment:
Q  144 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctat 239  Q
    |||||| ||| ||||| |||| |||||||||||||||||||| ||||||||||| |||||||||||||||||| || |||||||||||||||||||    
T  10721873 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccagaaacgtagagaaatgacagttttaggcagttttagacctacccctat 10721967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 53 - 216
Target Start/End: Complemental strand, 41834608 - 41834446
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcat-tt 151  Q
    ||||||||||||||||||||||||||||  ||||| ||  ||||||||| || |||||||  ||| | |  ||||||||| |||| | || |||||| ||    
T  41834608 aaaggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcagatcgaacaaaaccgtcc-taaactatcatgtt 41834510  T
Q  152 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    || ||||| |||| |||||||||||||||||| |||||  |||||||||||||||||||||||||    
T  41834509 tttttgcagttttagtcctacctcctattttc-aactcttgaaacgcagagaaatgacagtttta 41834446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 27307148 - 27307238
Alignment:
Q  144 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctaccc 235  Q
    |||||| ||| ||||| |||| ||| |||||||||||||||| ||||||||||||| |||||||||||||||| || |||||||||||||||    
T  27307148 tatcatgttttttgcagttttagtcttacctcctattttcaa-ctccagaaacgcatagaaatgacagttttaggcagttttagacctaccc 27307238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 182
Target Start/End: Complemental strand, 4624757 - 4624644
Alignment:
Q  69 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 168  Q
    |||| |||||||||||||  ||||||||||||| || || || |  ||||||||| ||||||||  || |||||||||||||| ||||||||||||||||    
T  4624757 ttttcgtcctcgtgttttaacctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtc 4624658  T
Q  169 ctacctcctatttt 182  Q
    ||||| || |||||    
T  4624657 ctaccccccatttt 4624644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 28494931 - 28495029
Alignment:
Q  144 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacc-cctatgct 242  Q
    |||||| ||| ||||| |||| |||||||||||||||||||| |||||||||||||||||| ||||| ||||| |  |||||||||||||| ||||||||    
T  28494931 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccagaaacgcagagaagtgacaattttaggtagttttagacctaccacctatgct 28495029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 28290191 - 28290031
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||||||    ||||| || |||||||||| || ||||  | |||| |||  ||||||||  |||||| || ||| || |||     
T  28290191 aggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcatttttaaatcgaacaaaatcgtccttaaactat-atgtttt 28290093  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  28290092 ttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 28290031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 15029856 - 15029696
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||   ||||| || |||||||||| || || | || |||| |||  ||||||||  |||||| || ||| || |||     
T  15029856 aggcttaattacacttttggtcctcccattttgaccaactcacgaaaatggtcttaccttttttaaatcgaacaaaatcgtccttaaactat-atgtttt 15029758  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| |||| || | | ||||   |||||||||||||||||||| | ||||||||||||||    
T  15029757 ttgcagttttagttcgatctccctatttcaaactccagaaacgcacataaatgacagtttta 15029696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 28495288 - 28495228
Alignment:
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| |||| |||||||||||||||||||| |||||||| ||||||||||||| |||||||    
T  28495288 ttgcagttttagtcctacctcctattttcaa-ctccagaaccgcagagaaatgatagtttta 28495228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 32305916 - 32305976
Alignment:
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| |||| |||||||||| ||||||||| |||||||||| |||||||||||||||||||    
T  32305916 ttgcagttttagtcctacctcttattttcaa-ctccagaaacacagagaaatgacagtttta 32305976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 235
Target Start/End: Complemental strand, 16753114 - 16752938
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcat--ttttgt 155  Q
    |||||||||| |||||||| |||  ||||| || |||||||||| || | |||||  ||| |||  |||| ||||  ||||  |||||||||  |||| |    
T  16753114 cttaattacatttttggtcatcgcattttgaccaactcacgaaaatggttctgcctctttcaaatcgaacgaaaccatccta-aattatcatgttttttt 16753016  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctaccc 235  Q
    |||| |||| | |||| ||||||||||||| ||||||||||||||| ||||| |||||||| || | |||||||||||||    
T  16753015 tgcagttttagacctaactcctattttcaa-ctccagaaacgcagaaaaatggcagttttaggcag-tttagacctaccc 16752938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 216
Target Start/End: Original strand, 22651347 - 22651504
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaaacagaacaaaacggtccttcaattatcatttttgtt 156  Q
    |||||||||| ||||||| ||||| ||||| ||  |||||| || || || |||| |||||||| || ||||||||  ||||| || |||||| ||| ||    
T  22651347 cttaattacatttttggttctcgtattttgaccagctcacggaaatggtcatgcctcttttaaatca-aacaaaaccatccttaaactatcatgttt-tt 22651444  T
Q  157 gcatttttcgtcctacctcc-tattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||| |||| ||||||||||| ||||||| ||||||||||||||| | ||||| ||||||||    
T  22651445 gcagttttagtcctacctccttattttc-aactccagaaacgcacaaaaatggcagtttta 22651504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 173
Target Start/End: Complemental strand, 13814226 - 13814155
Alignment:
Q  107 cctgcccttttaaaacagaacaaaacggtcct-----tcaattatcatttttgttgcatttttcgtcctacc 173  Q
    |||||||||||||| ||||||||||| ||| |     ||||||||||||||||||||| |||||||||||||    
T  13814226 cctgcccttttaaatcagaacaaaactgtcatgtctttcaattatcatttttgttgcacttttcgtcctacc 13814155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 27307499 - 27307445
Alignment:
Q  161 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||| |||||||||||||||||||| ||||||||| |||||||||||||| |||||    
T  27307499 ttttagtcctacctcctattttcaa-ctccagaaatgcagagaaatgacattttta 27307445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 13557079 - 13557176
Alignment:
Q  144 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||| ||| ||||| |||| ||||||| || |||||| || || |||||||||||||||||  || ||| |||| |||||||||||||| |||||||    
T  13557079 tatcatgttttttgcagttttagtcctacatcttattttgaa-ctgcagaaacgcagagaaattgcaatttgatgccgttttagacctacctctatgct 13557176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 213
Target Start/End: Original strand, 38900648 - 38900800
Alignment:
Q  60 taattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    |||||||||||||||||||||  ||||| || |||||||||| ||||||| || |||||||| | ||||||||  |||| | |||||| || ||| ||||    
T  38900648 taattacacttttggtcctcgcattttgaccaactcacgaaaatgatcctacctcttttaaatc-gaacaaaatcgtccctaaattat-atgttttttgc 38900745  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtt 213  Q
    | |||| |||||| ||||   |||| ||||||| ||||| | | |||||||||||    
T  38900746 agttttagtcctatctccctatttccaactccataaacgtacataaatgacagtt 38900800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 16752581 - 16752740
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||  |  ||||| ||  ||||||||| ||||| |||   ||| |||  ||||||||  |||| | || ||| || |||     
T  16752581 aggcttaattacacttttggtccctgcattttgaccagctcacgaaaatgatcatgcttctttcaaatcgaacaaaatcgtccataaactat-atgtttt 16752679  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| |||| ||| |||||||||||||| ||||||| ||||||| |||||||| |||||||    
T  16752680 ttgcagtttttgtcatacctcctattttc-aactccataaacgcaaagaaatgatagtttta 16752740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 216
Target Start/End: Original strand, 28289682 - 28289843
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaaacagaacaaaacggtccttcaattatcatttt 152  Q
    |||||||||||||||||||| |||| |  ||||| || |||||||||| |  || | || |||||||| | ||||||||  |||| | |||||| || ||    
T  28289682 aaggcttaattacacttttgatccttgcattttgaccaactcacgaaattagtcatacctcttttaaatc-gaacaaaatcgtccctaaattat-atgtt 28289779  T
Q  153 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    | || || |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  28289780 ttttccagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 28289843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 172; Significance: 2e-92; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 55 - 242
Target Start/End: Original strand, 15523234 - 15523421
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||     
T  15523234 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttt 15523333  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15523334 ttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 15523421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 56 - 242
Target Start/End: Original strand, 22434179 - 22434365
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22434179 ggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 22434278  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22434279 tgtatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 22434365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 56 - 242
Target Start/End: Complemental strand, 45082969 - 45082783
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  45082969 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 45082870  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  45082869 tgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 45082783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 56 - 242
Target Start/End: Complemental strand, 12234874 - 12234688
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12234874 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 12234775  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| || ||||||||||||||||||||||    
T  12234774 tgcatttttcgtcctacctcctattttcaaaccccagaaatgcagagaaatgacagttttaggcagttttagacctacccctatgct 12234688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 56 - 242
Target Start/End: Original strand, 46193405 - 46193591
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  46193405 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttgt 46193504  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||    
T  46193505 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacggttttagatctacccctatgct 46193591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 55 - 242
Target Start/End: Complemental strand, 20471057 - 20470870
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| || | |||||||||||||||||||||||||| |||||||||||||||||    
T  20471057 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcatttttg 20470958  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  20470957 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttaggcggttttagacctacccctatgct 20470870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 51 - 242
Target Start/End: Original strand, 25447242 - 25447433
Alignment:
Q  51 ttaaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 150  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25447242 ttaatggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 25447341  T
Q  151 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| || ||||||||||||||| ||||||    
T  25447342 tttgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttaggcagttttagacctacccatatgct 25447433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 55 - 242
Target Start/End: Complemental strand, 23494989 - 23494802
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23494989 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 23494890  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||||| ||||||| |||||||||||||||| | ||||||| || ||||| |||||||||||||||||||||||||    
T  23494889 ttgcatttttcgtcctacatcctattctcaaactccagaaacgtaaagaaatggcaattttaggcggttttagacctacccctatgct 23494802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 52 - 242
Target Start/End: Complemental strand, 25938220 - 25938030
Alignment:
Q  52 taaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 151  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||    
T  25938220 taaaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcattt 25938121  T
Q  152 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||||||    
T  25938120 ttgttgcattttttgtcctacctcctattttcaaactccagaaacacaaagaaatggcagttttatgcggttttagacctacctctatgct 25938030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 53 - 242
Target Start/End: Original strand, 11153143 - 11153332
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 152  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| || || ||||||||||||| |||| |||||||||||||||||||||||||    
T  11153143 aaaggcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttt 11153242  T
Q  153 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11153243 tgttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 11153332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 59 - 242
Target Start/End: Complemental strand, 4220101 - 4219918
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||    
T  4220101 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcatttttgttgc 4220002  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||||||||||||||||| || |||||||||||||| ||||||||| ||||||||||||| |||||||||||    
T  4220001 atttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttaggcggttttagacccacccctatgct 4219918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 59 - 242
Target Start/End: Original strand, 54995072 - 54995255
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  54995072 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 54995171  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||| ||||||    
T  54995172 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggttttagacctacccttatgct 54995255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 51 - 237
Target Start/End: Complemental strand, 48526731 - 48526545
Alignment:
Q  51 ttaaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 150  Q
    ||||||| ||||||| |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |    
T  48526731 ttaaaggtttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcact 48526632  T
Q  151 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccct 237  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||    
T  48526631 tttgttgcatttttcgtcctacctcctattttcaaactccataaacacagagaaatgacagttttaggcggttttagacctacccct 48526545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 55 - 242
Target Start/End: Complemental strand, 51021341 - 51021155
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||| |||||||||||| |    
T  51021341 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatcatttt-g 51021243  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||    
T  51021242 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcaattttaggcggttttagacctacccctatgct 51021155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 54 - 242
Target Start/End: Original strand, 18751597 - 18751785
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    |||| ||||||||||||||||||||||||||||||||||||||  |||||| || |||||||||||||||||||||||||||||||||| ||||||||||    
T  18751597 aaggtttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcattttt 18751696  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||| ||||||||||||    
T  18751697 gttgcatttttcgtcccacctcctattttcaaactccagaaacgcagaaaaatggcagttttaggcggttttagacttacccctatgct 18751785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 51 - 242
Target Start/End: Original strand, 2118288 - 2118480
Alignment:
Q  51 ttaaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 150  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||| |||||||  |||||||||||||||||    
T  2118288 ttaaagacttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcatt 2118387  T
Q  151 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctac-ccctatgct 242  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||| |||||||||||||||| |||||||||    
T  2118388 tttgttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaattgcagttttaggcggttttagacctactccctatgct 2118480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 73 - 242
Target Start/End: Original strand, 12503453 - 12503622
Alignment:
Q  73 ggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctac 172  Q
    ||||||||||||||| | |||||||||||||||||| ||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  12503453 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 12503552  T
Q  173 ctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||    
T  12503553 ctcctattttcaaactccagaaacgcagagaaattacagttttaggcgattttagacctacccctatgct 12503622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 58 - 216
Target Start/End: Original strand, 33109686 - 33109843
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33109686 cttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttg 33109785  T
Q  158 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  33109786 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 33109843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 25447782 - 25447622
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25447782 aggcttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttg 25447683  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||||||  | ||||| |  ||||| |||||||||||||| |||||||||    
T  25447682 ttgcatttttcgtcctaccctccatttt-attctccaaaaacgcagagaaattacagtttta 25447622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 56 - 216
Target Start/End: Complemental strand, 11153692 - 11153533
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  11153692 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcatttttgt 11153593  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||  | ||||| |  ||||| |||||||||||||| |||||||||    
T  11153592 tgcatttttcgtcctaccctccatttt-attctccaaaaacgcagagaaataacagtttta 11153533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 53 - 216
Target Start/End: Complemental strand, 46193953 - 46193791
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 152  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  46193953 aaagacttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 46193854  T
Q  153 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    | ||||||||||||||||||| || ||||| |  ||||| ||||| |||||| |||||||||||    
T  46193853 tattgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaattgacagtttta 46193791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 12234328 - 12234488
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||||||| ||||||||| || ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12234328 aggcttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 12234427  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||| || ||||| |  ||||| |||||||||||||| |||||||||    
T  12234428 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagtttta 12234488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 25937669 - 25937829
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25937669 aggcttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 25937768  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||| |||||  | || ||||| |  ||||| ||||||||||||||||||||||||    
T  25937769 ttgcattttttgtcctgtcccccatttt-attctccaaaaacgcagagaaatgacagtttta 25937829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 52 - 216
Target Start/End: Original strand, 23494439 - 23494602
Alignment:
Q  52 taaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 151  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||    
T  23494439 taaagacttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcattt 23494538  T
Q  152 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    || ||||||||||||||||||| || ||||| |  ||||| | ||||||||||||||||||||||    
T  23494539 ttattgcatttttcgtcctaccccccatttt-attctccaaacacgcagagaaatgacagtttta 23494602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 55 - 182
Target Start/End: Complemental strand, 33110010 - 33109883
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33110010 aggcttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 33109911  T
Q  155 ttgcatttttcgtcctacctcctatttt 182  Q
    ||||||||||||||||||||||||||||    
T  33109910 ttgcatttttcgtcctacctcctatttt 33109883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 58 - 216
Target Start/End: Original strand, 4219559 - 4219716
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||| | |||||||| ||||||||||||||||||||||||    
T  4219559 cttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttg 4219658  T
Q  158 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  4219659 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 4219716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 54 - 216
Target Start/End: Complemental strand, 15523781 - 15523620
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||| ||||||| |||||||||| ||||||||||    
T  15523781 aaggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcattttt 15523682  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||||| ||||||||||||||||    
T  15523681 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcaaagaaatgacagtttta 15523620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 58 - 216
Target Start/End: Complemental strand, 38962362 - 38962205
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    |||||||||| |||||||||||||||||||| ||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38962362 cttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 38962263  T
Q  158 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||| || ||||| |  || || ||||||||||||||||||||||||    
T  38962262 catttttcgtcctaccccccatttt-attcttcaaaaacgcagagaaatgacagtttta 38962205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 53 - 216
Target Start/End: Complemental strand, 22170484 - 22170323
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 152  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||| || ||||||| |||||||||| |||||||||||| |||||||||||||||    
T  22170484 aaaggcttaattacacttttggtcctcgtgttttgacctactgacgaaattg-tcctgcctttttaaaacaaaacaaaacggtcattcaattatcatttt 22170386  T
Q  153 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  22170385 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 22170323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 22434718 - 22434564
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| |||||||||||||||||||||    
T  22434718 ttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaa-cagaacaaaacggtcattcaattatcatttttgttgc 22434620  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  22434619 atttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagtttta 22434564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 48526195 - 48526354
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||| ||||||||||| |||||||| |||||||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  48526195 aggcttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 48526294  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||| || ||||| |  ||||| ||| ||||||||||||||||||||    
T  48526295 ttgcatttttcgtcctacc-cccatttt-attctccaaaaatgcagagaaatgacagtttta 48526354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 51020796 - 51020956
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||| ||||| |||||||||  | |||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  51020796 aggcttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttg 51020895  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||| || ||||| |  || || ||||| ||||||||||||||||||    
T  51020896 ttgcatttttcgtcctaccccccatttt-attcttcaaaaacgtagagaaatgacagtttta 51020956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 54995609 - 54995454
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||| |||||||||    
T  54995609 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatca-ttttgttgc 54995511  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||| | || ||||| |  ||| | ||||||| |||||||| |||||||    
T  54995510 atttttcgtcctaacccccatttt-attctctaaaaacgcaaagaaatgatagtttta 54995454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 52 - 216
Target Start/End: Complemental strand, 2118844 - 2118682
Alignment:
Q  52 taaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 151  Q
    |||||| |||||||||||||||||| |||||||||||||| |||| ||||||| ||||  |||||||||||| |||||||||||| ||||||||||||||    
T  2118844 taaaggtttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcattt 2118745  T
Q  152 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||||||||| || ||||| |  ||||| |||||||||||||| | |||||||    
T  2118744 ttgttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaataatagtttta 2118682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 58 - 170
Target Start/End: Complemental strand, 18764063 - 18763951
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||| ||||| ||||||||||||||    
T  18764063 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttttgttg 18763964  T
Q  158 catttttcgtcct 170  Q
    |||||||||||||    
T  18763963 catttttcgtcct 18763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 45082435 - 45082589
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    |||||||| ||||||||| ||||||||||| ||||||||||| ||| |  ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  45082435 ttaattacgcttttggtcatcgtgttttggtctactcacgaa-ctggttttgcccttttaaaatagaacaaaacggtccttcaattatcatttttgttgc 45082533  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||| || ||||| |  ||||| |||| ||||||||||||| |||||    
T  45082534 atttttcgtcctacc-cccatttt-attctccaaaaacacagagaaatgacaatttta 45082589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 57 - 173
Target Start/End: Complemental strand, 20958403 - 20958288
Alignment:
Q  57 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 156  Q
    |||||||||||||||| |||||||| ||||||||||||||||||| || |||||||||||||||||||||||||   |||||||||||||||||||||||    
T  20958403 gcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcatttttgtt 20958304  T
Q  157 gcatttttcgtcctacc 173  Q
    |||||||| ||||||||    
T  20958303 gcattttt-gtcctacc 20958288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 55 - 162
Target Start/End: Original strand, 48708294 - 48708401
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  48708294 aggcttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatcatttttg 48708393  T
Q  155 ttgcattt 162  Q
    ||||||||    
T  48708394 ttgcattt 48708401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 56 - 173
Target Start/End: Complemental strand, 35363146 - 35363028
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgccctttt-aaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| | |||| ||||| |||| | |||||||||||| |||||||||||||||||    
T  35363146 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatcatttttg 35363047  T
Q  155 ttgcatttttcgtcctacc 173  Q
    ||||||||||||| |||||    
T  35363046 ttgcatttttcgttctacc 35363028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 48293593 - 48293708
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |  ||||||||| |||||||  || ||||||||||||||||||    
T  48293593 aggcttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcatttttg 48293692  T
Q  155 ttgcatttttcgtcct 170  Q
    ||||||||||| ||||    
T  48293693 ttgcatttttcatcct 48293708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 54 - 184
Target Start/End: Complemental strand, 10258434 - 10258304
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||| || ||||||||||||||||||||  ||||  ||  ||||||||||||||||    
T  10258434 aaggcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatcattttt 10258335  T
Q  154 gttgcatttttcgtcctacctcctattttca 184  Q
    |||||| |||| ||| |||| ||||||||||    
T  10258334 gttgcagttttagtcttaccccctattttca 10258304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 57 - 173
Target Start/End: Complemental strand, 44892692 - 44892576
Alignment:
Q  57 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 156  Q
    ||||||||| | ||||||||||||||||||| ||||||||||||| || | ||||| ||||||||||||||||||| ||| |||||||||  ||||||||    
T  44892692 gcttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatattttttgtt 44892593  T
Q  157 gcatttttcgtcctacc 173  Q
    |||||||||||||||||    
T  44892592 gcatttttcgtcctacc 44892576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 74 - 173
Target Start/End: Complemental strand, 43243807 - 43243708
Alignment:
Q  74 gtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacc 173  Q
    |||||||||||||||||||||||||||| || || |||||||||||||||||||||||  || |||||||||||||||||||||||||||| ||||||||    
T  43243807 gtcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcctacc 43243708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 52 - 182
Target Start/End: Original strand, 16690932 - 16691062
Alignment:
Q  52 taaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 151  Q
    |||||| ||||||||| |||||||||| ||||||||  |||||||||||| || |||||||  ||||||||| |||||||   |||||||||||||||||    
T  16690932 taaaggtttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcattt 16691031  T
Q  152 ttgttgcatttttcgtcctacctcctatttt 182  Q
    |||||||||||||||||||||| || |||||    
T  16691032 ttgttgcatttttcgtcctacccccgatttt 16691062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 16318323 - 16318251
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaa 126  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16318323 aaggcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaacagaa 16318251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 48713888 - 48713777
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    ||||||||||||||  | |||||||||| ||||||||| |||| || || ||| |||||||||||||||||||  |||||||||||||||||||||||||    
T  48713888 ttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcatttttgttgc 48713789  T
Q  159 atttttcgtcct 170  Q
    ||||||||||||    
T  48713788 atttttcgtcct 48713777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 74 - 182
Target Start/End: Complemental strand, 43281317 - 43281210
Alignment:
Q  74 gtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacc 173  Q
    |||||||||||||||||||||||||||| || || |||| ||||||||||||||||||  || |||||||||| ||||||||||||||||||||||||||    
T  43281317 gtcctcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattat-atttttgttgcatttttcgtcctacc 43281219  T
Q  174 tcctatttt 182  Q
     || |||||    
T  43281218 ccccatttt 43281210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 56 - 182
Target Start/End: Complemental strand, 48295088 - 48294961
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||||| |||||||| ||||||||||  |||||||||||| || || ||||  ||||||||| |||||||  ||| ||||||||||||||||||    
T  48295088 ggcttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcatttttgt 48294989  T
Q  156 tgcattttt-cgtcctacctcctatttt 182  Q
    ||||||||| ||||||||| || |||||    
T  48294988 tgcatttttccgtcctaccccccatttt 48294961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 56 - 182
Target Start/End: Complemental strand, 16691616 - 16691491
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||||||||||| |||  |||||||| ||||||||||||| || |||||||  |||||| || |||||||  |||||| |||||| ||||||||    
T  16691616 ggcttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctgcctctttaaa-cataacaaaattgtcctttaattattatttttgt 16691518  T
Q  156 tgcatttttcgtcctacctcctatttt 182  Q
    ||||||||||||| ||||||| |||||    
T  16691517 tgcatttttcgtcatacctcccatttt 16691491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 168
Target Start/End: Original strand, 20957196 - 20957301
Alignment:
Q  63 ttacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattt 162  Q
    ||||| |||||||||||| |||||||| ||||||||||| || || | | ||||||||||| |||||||  ||||||||||||||| |||||||||||||    
T  20957196 ttacatttttggtcctcgagttttggcttactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatcaattttgttgcattt 20957295  T
Q  163 ttcgtc 168  Q
    ||||||    
T  20957296 ttcgtc 20957301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 182
Target Start/End: Original strand, 44890518 - 44890643
Alignment:
Q  57 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 156  Q
    ||||||||||| |||||||||| |||||||| |||| |||||||| || || |||||||||||||||||||||||   ||||| ||||||  ||||||||    
T  44890518 gcttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattatattttttgtt 44890617  T
Q  157 gcatttttcgtcctacctcctatttt 182  Q
    ||||||||| || |||| || |||||    
T  44890618 gcatttttcatcataccccccatttt 44890643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 124 - 216
Target Start/End: Complemental strand, 12503913 - 12503822
Alignment:
Q  124 gaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  12503913 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagtttta 12503822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 43242328 - 43242396
Alignment:
Q  114 ttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctatttt 182  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||    
T  43242328 ttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcctacctccaatttt 43242396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 216
Target Start/End: Original strand, 17503972 - 17504132
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    |||||||||||| ||| ||||||||||  ||||| ||  ||||||||| || |||||||  ||| |||  ||||| ||| |||||  || |||||| |||    
T  17503972 aaggcttaattatactgttggtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgtccta-aactatcatgttt 17504070  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
     ||||| |||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  17504071 tttgcagttttagtcctacctcctattttcaa-ctccagaaacgtagagaaatgacagtttta 17504132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 216
Target Start/End: Complemental strand, 17504437 - 17504346
Alignment:
Q  124 gaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||| |||||| || ||| || ||| ||||| |||| || ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  17504437 gaacaaaaccgtccttaaactat-atgttttttgcaattttagtactacctcctatttttcaactctagaaacgcagagaaatgacagtttta 17504346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 55189528 - 55189636
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||| | ||||| ||||||||||||| |||| |||  ||| || |  ||||||||||||| |||||||||  ||| |||||||||||||||||     
T  55189528 ggcttaattatatttttgatcctcgtgttttgacctattcataaaaatggttatgcccttttaaaatagaacaaaattgtctttcaattatcatttttgc 55189627  T
Q  156 tgcattttt 164  Q
    | |||||||    
T  55189628 tacattttt 55189636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 229
Target Start/End: Complemental strand, 40160633 - 40160465
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    ||||||||| |||||||||| |  ||||| || |||||||||| |  || ||||  ||| |||  ||||||||| |||||  || |||||| ||| ||||    
T  40160633 ttaattacatttttggtccttgcattttgaccaactcacgaaaatagtcatgcctctttcaaattgaacaaaaccgtccta-aactatcatgttttttgc 40160535  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagac 229  Q
    | |||| ||| |||||||||||||| ||||||||||||| |||||||   |||||||| || |||||||||    
T  40160534 agttttagtcttacctcctattttc-aactccagaaacgtagagaaaatgcagttttaggcagttttagac 40160465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 35193406 - 35193466
Alignment:
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| |||| |||||| ||||||||||||| || |||||||||||||||||||||||||||    
T  35193406 ttgcagttttagtcctatctcctattttcaa-cttcagaaacgcagagaaatgacagtttta 35193466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 216
Target Start/End: Complemental strand, 24336313 - 24336150
Alignment:
Q  52 taaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 151  Q
    ||||| |||||||||||||||| ||||||  ||||| |   ||||||||| || |||||||  ||| |||  ||||||||| || | | ||||||||| |    
T  24336313 taaagtcttaattacacttttgatcctcgcattttgacaagctcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgttcctaaattatcatgt 24336214  T
Q  152 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    || ||||  |||| |||||||| | ||||||| ||||||||||||| | ||||||| ||| ||||    
T  24336213 tttttgctcttttagtcctaccccatattttc-aactccagaaacgtatagaaatggcagcttta 24336150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 216
Target Start/End: Original strand, 34789382 - 34789541
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||||||||||||||||    ||||| || |||||||||| || ||||  | |||| |||  ||||||||  |||||| || ||| || ||| |    
T  34789382 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 34789480  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||| |||| |||||| ||||   |||||||||||||||||||| | |||||||| |||||    
T  34789481 tgcagttttagtcctatctccctatttcaaactccagaaacgcacataaatgacaatttta 34789541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 173
Target Start/End: Complemental strand, 44220861 - 44220805
Alignment:
Q  117 taaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacc 173  Q
    |||||||||||||||  |||||||| |||||||||||||| |||||||||| |||||    
T  44220861 taaaacagaacaaaattgtccttcatttatcatttttgtttcatttttcgttctacc 44220805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 216
Target Start/End: Original strand, 12593022 - 12593183
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    |||||||||||||||||||||||||     |||| || |||||||||| || || | || |||| |||  ||||||||  |||||| || ||| || |||    
T  12593022 aaggcttaattacacttttggtcctaccagtttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaatcgtccttaaactat-atgttt 12593120  T
Q  154 gttgcatttttcgtcctacctcc-tattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
     ||||| ||||  ||||| |||| ||||||||| ||||||||||||| ||||||||||||||||    
T  12593121 tttgcaattttaatcctatctccctattttcaa-ctccagaaacgcacagaaatgacagtttta 12593183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 182
Target Start/End: Complemental strand, 30598065 - 30597940
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctg-cccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||| |||||||||||||||||||||||||| || ||||||| || || | ||| | |||||||| | ||||||||  |||| | |||||| |||||||    
T  30598065 ggcttgattacacttttggtcctcgtgttttgaccaactcacggaattggttctgtctcttttaaatc-gaacaaaatcgtccctaaattat-atttttg 30597968  T
Q  155 ttgcatttttcgtcctacctcctatttt 182  Q
    ||||| |||| |||||| | ||||||||    
T  30597967 ttgcacttttggtcctaacccctatttt 30597940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 216
Target Start/End: Complemental strand, 229707 - 229546
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaaacagaacaaaacggtccttcaattatcatttt 152  Q
    |||| |||||||||||||||||| |||  ||||| ||  ||||||||| || || |||| |||| ||| || |||||||  |||||| || |||||| ||    
T  229707 aaggtttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgcctctttcaaatca-aacaaaatcgtccttaaactatcatgtt 229609  T
Q  153 tgttgcatttttcgtcctacctcct-attttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    | ||||| ||||  ||||||||||| |||||||| ||||||||||||| |||| ||||| |||||    
T  229608 t-ttgcagttttaatcctacctccttattttcaa-ctccagaaacgcacagaagtgacaatttta 229546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 235
Target Start/End: Complemental strand, 35193849 - 35193672
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||| |  |||||     ||||||||| || |||||||  ||| |||   |||||||| |||||  || |||||| |||     
T  35193849 aggcttaattacacttttggtccttgcattttgataagctcacgaaaatggtcctgcctctttcaaatctaacaaaaccgtccta-aactatcatgtttt 35193751  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctaccc 235  Q
    |||   |||| ||| |||||||||||||||| |||||||||||||||| |||| |||||||| || |||  ||||||||||    
T  35193750 ttgatgttttagtcatacctcctattttcaa-ctccagaaacgcagag-aatggcagttttaagcagttacagacctaccc 35193672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 216
Target Start/End: Complemental strand, 34789927 - 34789769
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaaacagaacaaaacggtccttcaattatcatttttgtt 156  Q
    ||||||||||||||||||||| |  ||||| || |||||||||| || |||| || |||||||| | ||||||||  |||| | || |||   |||| ||    
T  34789927 cttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatc-gaacaaaattgtccctaaactatatgttttttt 34789829  T
Q  157 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||| |||| |||||| ||||   |||| ||||||| ||||||| | ||||||||||||||    
T  34789828 gcagttttagtcctatctccctatttccaactccaaaaacgcacataaatgacagtttta 34789769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 216
Target Start/End: Complemental strand, 45839098 - 45838934
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatca--tt 150  Q
    ||||| ||||||||||||||||||||  | ||||| || |||||||||| || ||||  | |||| |||  ||||||||  |||||| || |||    ||    
T  45839098 aaaggtttaattacacttttggtcctactattttgaccaactcacgaaa-tggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttt 45839000  T
Q  151 tttgttgcatttttcgtcctacct-cctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||| ||||| |||| |||||| || ||||||| ||| ||||||||||||| ||||||||||||||||    
T  45838999 ttttttgcagttttagtcctatcttcctatttccaa-ctccagaaacgcacagaaatgacagtttta 45838934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 55677506 - 55677459
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaa 101  Q
    ||||||||||||||||||||||||| || ||||| || ||||||||||    
T  55677506 aaggcttaattacacttttggtccttgtattttgaccaactcacgaaa 55677459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 10795730 - 10795692
Alignment:
Q  198 cagagaaatgacagttttatgcggttttagacctacccc 236  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  10795730 cagagaaatgacagttttaggcagttttagacctacccc 10795692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 14439926 - 14439987
Alignment:
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  14439926 ttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 14439987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 46736774 - 46736814
Alignment:
Q  175 cctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||| ||||||||||||| ||||||||||||||||    
T  46736774 cctattttcaa-ctccagaaacgcacagaaatgacagtttta 46736814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 26974407 - 26974443
Alignment:
Q  180 tttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  26974407 tttccaactccagaaacgcacagaaatgacagtttta 26974443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 216
Target Start/End: Original strand, 28465083 - 28465240
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaaacagaacaaaacggtccttcaattatcatttttgtt 156  Q
    ||||||||||||||| |||||    ||||| || ||| |||||| ||||||| || |||||||| | ||||||||  |||||| || ||| || ||| ||    
T  28465083 cttaattacacttttagtccttccattttgaccaacttacgaaattgatcctacctcttttaaatc-gaacaaaatcgtccttaaactat-atgtttttt 28465180  T
Q  157 gcatttttcgtcctacctcc-tattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||| |||| ||| || |||| ||||||||| ||||||||||||| | ||||||||||||||    
T  28465181 gcagttttagtcatatctccctattttcaa-ctccagaaacgcacataaatgacagtttta 28465240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 80
Target Start/End: Complemental strand, 51310059 - 51310027
Alignment:
Q  48 aagttaaaggcttaattacacttttggtcctcg 80  Q
    ||||||||||||||||| |||||||||||||||    
T  51310059 aagttaaaggcttaattgcacttttggtcctcg 51310027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 171; Significance: 6e-92; HSPs: 85)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 56 - 242
Target Start/End: Complemental strand, 37727475 - 37727289
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  37727475 ggcttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgt 37727376  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  37727375 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 37727289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 52 - 235
Target Start/End: Original strand, 39555574 - 39555757
Alignment:
Q  52 taaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  39555574 taaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcattt 39555673  T
Q  152 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctaccc 235  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39555674 ttgttgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctaccc 39555757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 53 - 242
Target Start/End: Original strand, 31778650 - 31778839
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 152  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||  ||||||||||    
T  31778650 aaaggcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcatttt 31778749  T
Q  153 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  31778750 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccgtatgct 31778839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 55 - 242
Target Start/End: Complemental strand, 4275910 - 4275723
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||| ||||||||||||||    
T  4275910 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcatttttg 4275811  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  4275810 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 4275723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 55 - 242
Target Start/End: Complemental strand, 43973986 - 43973799
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||    
T  43973986 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 43973887  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  43973886 ttgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttaggcagttttagacctacccctatgct 43973799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 53 - 242
Target Start/End: Complemental strand, 20841109 - 20840920
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 152  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  20841109 aaaggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttt 20841010  T
Q  153 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||  ||||||||||||    
T  20841009 tgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttaggcggttttagatatacccctatgct 20840920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 54 - 242
Target Start/End: Original strand, 27393659 - 27393847
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  27393659 aaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcattttt 27393758  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  27393759 gttgcatttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttaggcagttttagacctacccctatgct 27393847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 55 - 242
Target Start/End: Original strand, 17464490 - 17464677
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  17464490 aggcttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 17464589  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||| |||||||||||||||||||    
T  17464590 ttgcatttttcgtcctacctcctattttcaaactccagaaacgtaaagaaatgacagttttaggcggtgttagacctacccctatgct 17464677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 56 - 242
Target Start/End: Original strand, 25853234 - 25853420
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| |||||||||||||||||||||||||||||||||    
T  25853234 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 25853333  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  25853334 tgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaataacagttttaggcggttttagacctatccctatgct 25853420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 55 - 242
Target Start/End: Complemental strand, 5137527 - 5137340
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||| ||||||||| ||||||||||||||||||||||    
T  5137527 aggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 5137428  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  5137427 ttgcatttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccccatgct 5137340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 55 - 242
Target Start/End: Original strand, 22424813 - 22425000
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||| |||||||||  ||||||| ||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||    
T  22424813 aggcttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcatttttg 22424912  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  22424913 ttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaggcggttttagacctacccctatgct 22425000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 55 - 242
Target Start/End: Complemental strand, 29801962 - 29801775
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29801962 aggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttg 29801863  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||| |||||||    
T  29801862 ttgcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttagacggttttagacctacctctatgct 29801775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 53 - 242
Target Start/End: Original strand, 32534956 - 32535145
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 152  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||    
T  32534956 aaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttt 32535055  T
Q  153 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||| ||||||||| |||| ||||||||||    
T  32535056 tgttgcatttttcgtcctacctcctattttcaaactctagaatcacagagaaatgacagttttaggcggttttataccttcccctatgct 32535145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 56 - 242
Target Start/End: Complemental strand, 23645010 - 23644823
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  23645010 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatttttgt 23644911  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacct-acccctatgct 242  Q
    |||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  23644910 tgcatttttcatcctacctcctattttcaaactctagtaacgcagagaaatgacagttttaggcggttttagacctaacccctatgct 23644823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 54 - 240
Target Start/End: Complemental strand, 30098310 - 30098121
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||    
T  30098310 aaggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcattttt 30098211  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttag---acctacccctatg 240  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||   |||||||||||||    
T  30098210 gttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagatatgacagttttaggcggttttagatcacctacccctatg 30098121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 59 - 234
Target Start/End: Original strand, 26837363 - 26837538
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    ||||||||| |||||||||| || ||||||||||||||||||| || ||||||||||||| |||| ||| ||||||||||||||||||||||||||||||    
T  26837363 ttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcatttttgttgc 26837462  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacc 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26837463 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 26837538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 53 - 242
Target Start/End: Original strand, 24300554 - 24300742
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 152  Q
    ||||| ||||||||| |||||||| |||||||||||| || ||||||||||| ||||| ||||||||||||||| |||||||| ||||||||||||||||    
T  24300554 aaaggtttaattacatttttggtc-tcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatcatttt 24300652  T
Q  153 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  24300653 tgttgcaattttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccatatgct 24300742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 53 - 242
Target Start/End: Original strand, 26274564 - 26274753
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 152  Q
    ||||| ||||||||| ||||| |||| || |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26274564 aaaggtttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 26274663  T
Q  153 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||| || |||||||||||||  |||||||    
T  26274664 tgttgcatttttcgtcatacctcctattttcaaactccagaaacgcagttaaatgacagttttaggcagttttagacctacgtctatgct 26274753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 52 - 240
Target Start/End: Complemental strand, 41047246 - 41047060
Alignment:
Q  52 taaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 151  Q
    |||||| ||||||||||||| | || || |||||||||||||||||||||||| | ||| ||||||||||||||| |||||| |||||||||||||||||    
T  41047246 taaaggtttaattacactttcg-tcttcatgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaacg-tccttcaattatcattt 41047149  T
Q  152 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatg 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||    
T  41047148 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctacccatatg 41047060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 31779198 - 31779038
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31779198 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 31779099  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||| ||| || ||||| |  ||||| ||||||||||||||| ||||||||    
T  31779098 ttgcatttttcgtcccaccccccatttt-attctccaaaaacgcagagaaatgtcagtttta 31779038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 56 - 216
Target Start/End: Complemental strand, 39556122 - 39555963
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  39556122 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgt 39556023  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  39556022 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 39555963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 20840559 - 20840719
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  20840559 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcatttttg 20840658  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||| || ||||| |  ||||  ||||||||||||||||||||||||    
T  20840659 ttgcatttttcgtcctaccccccatttt-attctccttaaacgcagagaaatgacagtttta 20840719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 5136983 - 5137139
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    |||||||||||||||||||||||||||||||| |||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5136983 ttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 5137082  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  5137083 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 5137139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 41046703 - 41046859
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    |||||||||||||||||||||||||||||||||| | ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41046703 ttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41046802  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  41046803 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 41046859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 55 - 212
Target Start/End: Original strand, 48452988 - 48453144
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  48452988 aggcttgattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttg 48453087  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagt 212  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||    
T  48453088 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagt 48453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 53 - 216
Target Start/End: Original strand, 37726926 - 37727088
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 152  Q
    |||||||||||||||||||||||||||||||||||| || || ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||    
T  37726926 aaaggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcatttt 37727025  T
Q  153 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  37727026 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 37727088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 24301102 - 24300942
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||| |||||||||||||||| | |||||||||||    
T  24301102 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcatttttg 24301003  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  24301002 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 24300942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 56 - 216
Target Start/End: Original strand, 43973441 - 43973600
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  43973441 ggcttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 43973540  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||||| || ||||| |  ||||| ||||||||| |||| |||||||||    
T  43973541 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagataaataacagtttta 43973600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 53 - 216
Target Start/End: Original strand, 23644459 - 23644621
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 152  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  23644459 aaaggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcatttt 23644558  T
Q  153 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||||| || ||||| |  ||||| |||||||||||||| | |||||||    
T  23644559 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagtttta 23644621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 56 - 216
Target Start/End: Complemental strand, 32535508 - 32535345
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatc-----att 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||     |||    
T  32535508 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattaaatt 32535409  T
Q  151 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||||||| || ||||| |  ||||| |||||||||||||||| |||||||    
T  32535408 tttgttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgatagtttta 32535345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 54 - 216
Target Start/End: Complemental strand, 27394124 - 27393963
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||| |||||||||||||||||||| |||||||||||||||||||    
T  27394124 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcattttt 27394025  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||| | ||||||| || ||||| |  ||||| |||||||||||||| |||||||||    
T  27394024 gttgcattttccatcctacccccaatttt-attctccaaaaacgcagagaaataacagtttta 27393963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 30104481 - 30104640
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||| || | |||||||||||||||||||||||||    
T  30104481 aggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcatttttg 30104580  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||| || ||||| |   || | ||||||||||||||||||||||||    
T  30104581 ttgcatttttcgtcctacc-cccatttt-attatctaaaaacgcagagaaatgacagtttta 30104640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 60 - 206
Target Start/End: Complemental strand, 22425354 - 22425209
Alignment:
Q  60 taattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgca 159  Q
    |||||||||||||||||||||||||| |||||||||||||| ||| || ||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  160 tttttcgtcctacctcctattttcaaactccagaaacgcagagaaat 206  Q
    |||||||||||||| || ||||| |  ||||| ||||||||||||||    
T  22425254 tttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 22425209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 58 - 216
Target Start/End: Complemental strand, 25853770 - 25853613
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    |||||||||||||||| |||||||||||||  ||||||||||||||| || || | |||||||||||||||||| |||||||||||||||||||||||||    
T  25853770 cttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttg 25853671  T
Q  158 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||| |||||||||    
T  25853670 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagtttta 25853613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 26837901 - 26837742
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||| ||||||| |||||||||||||| ||||| |||||||||||    
T  26837901 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgccc-tttaaaatagaacaaaacggtcattcaagtatcatttttg 26837803  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||| |||||||| || ||||| |  ||||| ||| ||||||||||||||||||||    
T  26837802 ttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagtttta 26837742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 56 - 173
Target Start/End: Original strand, 29801356 - 29801473
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    ||||||||||||||||||||| |||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29801356 ggcttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 29801455  T
Q  156 tgcatttttcgtcctacc 173  Q
    ||||||||||||| ||||    
T  29801456 tgcatttttcgtcttacc 29801473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 56 - 182
Target Start/End: Complemental strand, 23228552 - 23228427
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| ||||||||  |||||||||||||||||||| |    
T  23228552 ggcttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaac-gaacaaaattgtccttcaattatcatttttat 23228454  T
Q  156 tgcatttttcgtcctacctcctatttt 182  Q
    ||||||||||||||||||||| |||||    
T  23228453 tgcatttttcgtcctacctcccatttt 23228427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 54 - 216
Target Start/End: Complemental strand, 17465039 - 17464877
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    |||||||||||||| ||||||||||||||||||||||||| || ||||||| ||   ||||||||||| |||||||||||||||||||||||||||||||    
T  17465039 aaggcttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattatcattttt 17464940  T
Q  154 gttgcat-ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||| |||| |||||||| || ||||| |  ||||| ||| ||||||||||||||||||||    
T  17464939 gttgcatttttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagtttta 17464877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 59 - 182
Target Start/End: Complemental strand, 25612519 - 25612396
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    ||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||| |||||||||| ||| || ||||||||||||||||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgttgc 25612420  T
Q  159 atttttcgtcctacctcctatttt 182  Q
    ||||||||||||||| || |||||    
T  25612419 atttttcgtcctaccccccatttt 25612396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 26275108 - 26274953
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    ||||||| | |||||| ||| |||||||| |||||||||||||||| |||| |||||||||||||||| |||||||||| ||||||||||||||||||||    
T  26275108 ttaattataattttggcccttgtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcatttttgttgc 26275009  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
     |||||||||||||| || ||||| |  ||||| || |||||||||||||||||||||    
T  26275008 -tttttcgtcctaccccccatttt-attctccaaaaccgcagagaaatgacagtttta 26274953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 55 - 182
Target Start/End: Complemental strand, 51474880 - 51474753
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||| | ||||||||||| ||||||||||| || || ||||||||||||||| |||||||  |||||| | ||||||||||||    
T  51474880 aggcttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttatcatttttg 51474781  T
Q  155 ttgcatttttcgtcctacctcctatttt 182  Q
    ||||||||||||||||||| || |||||    
T  51474780 ttgcatttttcgtcctacccccaatttt 51474753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 56 - 182
Target Start/End: Complemental strand, 50116954 - 50116828
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||||||||||| ||||||||||||| | ||||||||||| || || ||||||||| ||| |||||||||||||| |||| |||||||||||||    
T  50116954 ggcttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgt 50116855  T
Q  156 tgcatttttcgtcctacctcctatttt 182  Q
    |||| ||||||||||||| || |||||    
T  50116854 tgcaattttcgtcctaccccccatttt 50116828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 57 - 170
Target Start/End: Original strand, 51473429 - 51473542
Alignment:
Q  57 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 156  Q
    |||||||||||||||||||||||||||||||| ||| |||||||| || ||||||||||||||||||||||||||  |||||||  ||||||||||||||    
T  51473429 gcttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcatttttgtt 51473528  T
Q  157 gcatttttcgtcct 170  Q
    ||| |||| |||||    
T  51473529 gcacttttggtcct 51473542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 57 - 173
Target Start/End: Complemental strand, 32697244 - 32697128
Alignment:
Q  57 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 156  Q
    ||||||||| | |||||||||||||||||| |||||||||||||| |  ||  ||||||||||||||||||||||  || ||||||||||||||||||||    
T  32697244 gcttaattatatttttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcatttttgtt 32697145  T
Q  157 gcatttttcgtcctacc 173  Q
    |||||||||||||||||    
T  32697144 gcatttttcgtcctacc 32697128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 45965937 - 45966049
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||  | ||||||| ||||||||||| |||||||  ||||||| |||||||||| ||    
T  45965937 aggcttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatcatttgtg 45966036  T
Q  155 ttgcatttttcgt 167  Q
    |||||||||||||    
T  45966037 ttgcatttttcgt 45966049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 37220556 - 37220674
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||||||||| ||||||||||||||| | |  |||| ||| |||||||||||||| ||||  |||||||| ||||||||||||    
T  37220556 aggcttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcatttttg 37220655  T
Q  155 ttgcatttttcgtcctacc 173  Q
    ||||| |||||||||||||    
T  37220656 ttgcacttttcgtcctacc 37220674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 58 - 182
Target Start/End: Complemental strand, 25420684 - 25420560
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    |||||||||||||||| || |||| ||||| ||||||||||||| |||||  |||||||||||| |||| ||||  ||||||||||||| ||||||||||    
T  25420684 cttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttgttg 25420585  T
Q  158 catttttcgtcctacctcctatttt 182  Q
    ||||||||||| |||| || |||||    
T  25420584 catttttcgtcataccccccatttt 25420560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 37222117 - 37222030
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaa 142  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||| || ||||||| |||||||||||||||||||  ||||||||    
T  37222117 aggcttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaaccatccttcaa 37222030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 170
Target Start/End: Complemental strand, 18010271 - 18010176
Alignment:
Q  75 tcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcct 170  Q
    ||||| |||||| | |||||||||||| || | | ||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||    
T  18010271 tcctcctgttttcgtctactcacgaaaatggttccgcccttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgtcct 18010176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 153
Target Start/End: Original strand, 25419145 - 25419242
Alignment:
Q  57 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtcc-ttcaattatcattttt 153  Q
    |||| |||| |||||||||| ||||||||| || ||||||||||| |  | ||||||||||||||||||||||||| |||| ||||||||||||||||    
T  25419145 gcttgattatacttttggtcttcgtgttttagcttactcacgaaattagttctgcccttttaaaacagaacaaaactgtcctttcaattatcattttt 25419242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 27200238 - 27200079
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||| |  ||||| ||  ||||||||| || | |||||  ||| |||  |||||| || |||||  || |||||| |||     
T  27200238 aggcttaattacacttttggtccttgcattttgaccagctcacgaaaatggttctgcctctttcaaatcgaacaataccgtccta-aactatcatgtttt 27200140  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| |||| ||| |||||||||||||||| ||||||||||||||||||||||||| ||||    
T  27200139 ttgcagttttagtcatacctcctattttcaa-ctccagaaacgcagagaaatgacaggttta 27200079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 170
Target Start/End: Original strand, 32695706 - 32695817
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    ||||||||| ||||||||||| | |||||||||||| |||||| ||||  || | ||||||||||||||||||  ||||| | ||||| |||||||||||    
T  32695706 ttaattacatttttggtcctcatattttggcctacttacgaaattgattatgtctttttaaaacagaacaaaattgtcctacgattattatttttgttgc 32695805  T
Q  159 atttttcgtcct 170  Q
    | |||| |||||    
T  32695806 aattttagtcct 32695817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 216
Target Start/End: Original strand, 51827955 - 51828116
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcct-gcccttttaaaacagaacaaaacggtccttcaattatcatttt 152  Q
    ||||||||||||||||||||||||| |  ||||| || |||||||||| || |||| || |||||||| | ||||||||  |||| | || ||| || ||    
T  51827955 aaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctagctcttttaaatc-gaacaaaatcgtccctaaactat-atgtt 51828052  T
Q  153 tgttgcatttttcgtcctacct-cctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    | |||||||||| |||||| || ||||||||| ||||||||||||||| | ||||||||||||||    
T  51828053 ttttgcatttttagtcctatctccctattttc-aactccagaaacgcacataaatgacagtttta 51828116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 55192222 - 55192276
Alignment:
Q  161 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  55192222 ttttagtcctacctcctattttcaa-ctccagaaacgcagagaaatgacagtttta 55192276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 236
Target Start/End: Original strand, 8873784 - 8873869
Alignment:
Q  150 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccc 236  Q
    |||| ||||| |||| ||| |||||||||||||||| || ||||||||||||||||||||||||||| ||  |||| ||||||||||    
T  8873784 tttttttgcagttttagtcttacctcctattttcaa-cttcagaaacgcagagaaatgacagttttaggcaattttggacctacccc 8873869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 22370599 - 22370756
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    ||||||||||||||||||||||  ||||| || |||||||||| || |||| || |||| ||||  |||||||  |||| | || |||   |||| ||||    
T  22370599 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaatcgtccctaaactatatgtttttttgc 22370698  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    | |||| |||||| |||||  | || ||||||||||||||| |||||| |||||||||    
T  22370699 agttttagtcctatctccttatctccaactccagaaacgcacagaaataacagtttta 22370756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 49407795 - 49407954
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||||||||  ||||| ||  ||||||||| || || ||||  ||| ||| |||||||||| |||| | || | |   |||||    
T  49407795 aggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaactttatgttttg 49407894  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |  || |||| ||| |||||||||||||||| ||||| |||||||||||||||||| |||||    
T  49407895 ta-cagttttagtcatacctcctattttcaa-ctccaaaaacgcagagaaatgacaatttta 49407954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 55389604 - 55389764
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||| ||||||||||||||||||||   ||| | || |||||||||| || |||| || |||| |||  ||||||||  |||||| || ||| || |||     
T  55389604 aggcataattacacttttggtcctcccatttcgaccaactcacgaaaatggtcctaccttttttaaatcgaacaaaatcgtccttaaactat-atgtttt 55389702  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  55389703 ttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 55389764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 2323466 - 2323553
Alignment:
Q  144 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagaccta 232  Q
    |||||| ||| ||||| |||| |||||||||||||||||| |||||||||||| | || |||||||||||||| ||  |||||||||||    
T  2323466 tatcatgttttttgcaattttagtcctacctcctattttc-aactccagaaacacggataaatgacagttttaggcaattttagaccta 2323553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 37075781 - 37075847
Alignment:
Q  149 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| ||||| |||| |||||||||| ||||||||| ||||||||||||||||||||||| ||||||    
T  37075781 ttttttttgcagttttagtcctacctcttattttcaa-ctccagaaacgcagagaaatgaccgtttta 37075847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 216
Target Start/End: Complemental strand, 52237361 - 52237204
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaaacagaacaaaacggtccttcaattatcatttttgtt 156  Q
    ||||||||||||||||||||||   ||||| || |||||||||| || |||| || |||||||| | ||||||||  |||| | |||||| || ||| ||    
T  52237361 cttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatc-gaacaaaatcgtccctaaattat-atgtttttt 52237264  T
Q  157 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||| |||| |||||| ||||   |||| |||||| |||||||| ||||||||||||||||    
T  52237263 gcagttttagtcctatctccctatttctaactccggaaacgcacagaaatgacagtttta 52237204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 216
Target Start/End: Complemental strand, 36701640 - 36701483
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    |||||||||||||||||||||||  ||||| ||  ||||||||| || || || |  ||| |||  ||||||||   ||| | || |||||| ||| |||    
T  36701640 cttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcatccctaaactatcatgttttttg 36701541  T
Q  158 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    || |||| ||| |||||||||||||| |||||||||||| || ||||||| ||||||||    
T  36701540 cagttttagtcatacctcctattttc-aactccagaaacacatagaaatggcagtttta 36701483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 50900637 - 50900710
Alignment:
Q  161 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctaccc 235  Q
    |||| ||||||||| |||||||||| ||| ||||||  |||||||||||||||||| || |||||||||||||||    
T  50900637 ttttagtcctaccttctattttcaa-ctctagaaacatagagaaatgacagttttaggcagttttagacctaccc 50900710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 216
Target Start/End: Original strand, 36701104 - 36701267
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatca--ttt 151  Q
    |||||||||||||||||||||||||||  |||||  | |||||||||| ||||| ||||  ||| |||  ||||||||  |||| | || |||||  |||    
T  36701104 aaggcttaattacacttttggtcctcgcattttgatcaactcacgaaaatgatcatgcctctttcaaatcgaacaaaatcgtccataaactatcatgttt 36701203  T
Q  152 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    || || |  |||| ||  | |||||||||||| ||||||||||||||||| |||||||| |||||    
T  36701204 tttttacggttttagttatccctcctattttc-aactccagaaacgcagataaatgacaatttta 36701267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 50901074 - 50900915
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||||||||  ||||| ||  ||||| ||| ||  ||||||  ||  |||  ||||||||| |||| | || ||| || |||     
T  50901074 aggcttaattacacttttggtcctcgcattttgaccagctcacaaaaatggccctgcctcttacaaatcgaacaaaaccgtccctaaactat-atgtttt 50900976  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| |||| |||||||||||||||||| ||||||| ||||||| ||||||  ||||||||    
T  50900975 ttgcagtttttgtcctacctcctattttc-aactccataaacgcaaagaaattgcagtttta 50900915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 216
Target Start/End: Complemental strand, 330385 - 330223
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 152  Q
    |||||||||||||||| |||||||||||  ||||| || |||||||||| || |||| || |||| |||   |||||||  |||| | || ||| || ||    
T  330385 aaaggcttaattacacatttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccctaaactat-atgtt 330287  T
Q  153 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    | ||||| |||| ||| || ||||   |||| ||||| ||||||||| ||||||||||||||||    
T  330286 ttttgcagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagtttta 330223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 216
Target Start/End: Original strand, 40275093 - 40275254
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaaacagaacaaaacggtccttcaattatca-ttttt 153  Q
    ||||||||||||||||||||||||   ||||| || |||||||||| || |||| || |||||||| | ||||||||  |||| | || | |   |||||    
T  40275093 ggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatc-gaacaaaattgtccctaaactctatgttttt 40275191  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
     ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  40275192 tttgcagttttagtcctatctccatatttctaactccagaaacgcacagaaatgacagtttta 40275254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 47431695 - 47431856
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    ||||||||||||||||||||||||    ||||| || |||||||||| || || | || |||||||| | ||||||||  ||| || || |||   ||||    
T  47431695 aggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatacctcttttaaatc-gaacaaaatcgtctttaaactatatgtttt 47431793  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
     ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  47431794 tttgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagtttta 47431856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 49720370 - 49720530
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    ||||||||||||||||||| |||| |  ||||| || |||||||||| || |||| || |||||||| | ||||||||  |||| | || |||   ||||    
T  49720370 aggcttaattacacttttgatccttgcattttgaccaactcacgaaattggtcctacctcttttaaatc-gaacaaaatcgtccctaaagtatacgtttt 49720468  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
     ||||| |||| |||||| |||||  |||| ||||||||||||||| | ||||||||||||||    
T  49720469 -ttgcagttttagtcctatctccttatttctaactccagaaacgcacataaatgacagtttta 49720530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 52375878 - 52375718
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||||||||  ||||| || |||||||||| || |||| ||  ||| |||  ||||||||  |||| | || ||| || |||     
T  52375878 aggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaattgaacaaaatcgtccataaactat-atgtttt 52375780  T
Q  155 ttgcatttttcgtccta-cctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| |||| ||| ||  | |||| |||| ||||||||||||||| ||||||||||||||||    
T  52375779 ttgcagttttagtcatattccccta-tttccaactccagaaacgcacagaaatgacagtttta 52375718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 170
Target Start/End: Original strand, 23227260 - 23227370
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    |||||| ||||| ||||||||||   |||||||||| ||||||||||| || ||||       | ||||||||||||   ||||| ||||| ||||||||    
T  23227260 aaggctcaattagacttttggtctctgtgttttggcttactcacgaaaatggtcctc------tgaaacagaacaaatttgtcctccaattttcattttt 23227353  T
Q  154 gttgcatttttcgtcct 170  Q
    |||||||||||||||||    
T  23227354 gttgcatttttcgtcct 23227370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 32730812 - 32730776
Alignment:
Q  180 tttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||||||| ||||||||||||||||    
T  32730812 tttcaaactccagaaacgcacagaaatgacagtttta 32730776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 8874138 - 8874073
Alignment:
Q  149 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| ||||| |||| || |||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  8874138 ttttttttgcagttttagttctaccttctattttcaa-ctccagaaacgca-agaaatgacagtttta 8874073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 216
Target Start/End: Complemental strand, 14654738 - 14654578
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaaacagaacaaaacggtccttcaattatcattt 151  Q
    |||||||||||||||||||||||||| |  ||||| || |||||||||| ||   || || |||||||| | ||||||||  |||| | || |||  |||    
T  14654738 aaaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggctctacctcttttaaatc-gaacaaaatcgtccgtaaactatgtttt 14654640  T
Q  152 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||   || |||| |||||| |||||  |||| ||||||||||||||| | ||||||||||||||    
T  14654639 ttg---cagttttagtcctatctccttatttccaactccagaaacgcacataaatgacagtttta 14654578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 40839195 - 40839039
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    |||||||||||||||||||||   ||||| |  |||||||||| || || | || |||||||| | ||||||||  |||| | || ||| || ||| |||    
T  40839195 ttaattacacttttggtcctcacattttgacaaactcacgaaaatggtcttacctcttttaaatc-gaacaaaatcgtccctaaactat-atgttttttg 40839098  T
Q  158 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    || |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  40839097 cagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagtttta 40839039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 43222842 - 43222776
Alignment:
Q  150 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||| ||||| |||| |||| ||| ||||||||  ||||||||||||||| | ||||||||||||||    
T  43222842 tttttttgcagttttagtcccaccccctatttttcaactccagaaacgcacaaaaatgacagtttta 43222776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 50662860 - 50662799
Alignment:
Q  155 ttgcatttttcgtcctacctcc-tattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| |||| |||||| |||| ||||||||| ||||||||||||| ||||||||||||||||    
T  50662860 ttgcagttttagtcctagctccctattttcaa-ctccagaaacgcacagaaatgacagtttta 50662799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 51828410 - 51828344
Alignment:
Q  150 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||| ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  51828410 tttttttgcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagtttta 51828344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 87
Target Start/End: Original strand, 25611496 - 25611529
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttg 87  Q
    |||||||||||||||||||| |||||||||||||    
T  25611496 aaggcttaattacacttttgatcctcgtgttttg 25611529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 28871325 - 28871366
Alignment:
Q  7 caaacatgaaaacgggctaagccaccaatcatgataaccaaa 48  Q
    ||||||||| |||||| ||||||||||| |||||||||||||    
T  28871325 caaacatgagaacggggtaagccaccaaccatgataaccaaa 28871366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 37847267 - 37847207
Alignment:
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| |||| |||||| ||||||||||||| || |||||| |||||||||||||| |||||    
T  37847267 ttgcagttttagtcctatctcctattttcaa-cttcagaaatgcagagaaatgacaatttta 37847207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 43222488 - 43222549
Alignment:
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||  ||||||| ||||||||  ||||||||||||| | | ||||||||||||||    
T  43222488 ttgcatttttaatcctaccccctatttttcaactccagaaacgtacaaaaatgacagtttta 43222549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 52236935 - 52236975
Alignment:
Q  175 cctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||| ||||||||||||| ||||||||||||||||    
T  52236935 cctattttcaa-ctccagaaacgcacagaaatgacagtttta 52236975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 40838775 - 40838811
Alignment:
Q  180 tttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  40838775 tttccaactccagaaacgcacagaaatgacagtttta 40838811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 52375450 - 52375486
Alignment:
Q  180 tttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  52375450 tttctaactccagaaacgcatagaaatgacagtttta 52375486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 170; Significance: 2e-91; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 57 - 242
Target Start/End: Complemental strand, 4636515 - 4636330
Alignment:
Q  57 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  4636515 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgtt 4636416  T
Q  157 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  4636415 gcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttatgcgattttagacctacccctatgct 4636330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 55 - 242
Target Start/End: Original strand, 50970277 - 50970464
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||    
T  50970277 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcatttttg 50970376  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  50970377 ttgcatttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttttggcggttttagacctacccctatgct 50970464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 58 - 242
Target Start/End: Complemental strand, 17433758 - 17433574
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17433758 cttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 17433659  T
Q  158 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  17433658 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttagacggttttagacctacccctatgct 17433574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 58 - 242
Target Start/End: Original strand, 21856044 - 21856228
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21856044 cttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 21856143  T
Q  158 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  21856144 catttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 21856228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 53 - 242
Target Start/End: Original strand, 33143912 - 33144103
Alignment:
Q  53 aaaggcttaatta--cacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 150  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33143912 aaaggcttaattatacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 33144011  T
Q  151 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  33144012 ttttttgcatatttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 33144103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 54 - 242
Target Start/End: Complemental strand, 39154567 - 39154379
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||| |||||||||||||||||||||    
T  39154567 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcattttt 39154468  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  39154467 gttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacaattttaggcggttttagacctacccctatgct 39154379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 56 - 242
Target Start/End: Complemental strand, 29870164 - 29869978
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29870164 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 29870065  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  29870064 tgcatttttcgtcctacctcctattttcaaactttagaaacgcagagaaatgacagttttaggcggttttagacctacccatatgct 29869978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 57 - 242
Target Start/End: Original strand, 5539817 - 5540002
Alignment:
Q  57 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5539817 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 5539916  T
Q  157 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    | ||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||| |||||||||||||||||||||||||    
T  5539917 gtatttttcgtcctacctcctattttcaaactccataaacgcatagaaatggcagttttaggcggttttagacctacccctatgct 5540002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 57 - 242
Target Start/End: Original strand, 8678542 - 8678727
Alignment:
Q  57 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8678542 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgtt 8678641  T
Q  157 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||| |||||||||||| ||||||||||||    
T  8678642 gcatttttcgtcctacctgctattttcaaacttcagaaacgcaaagaaatgacagttttaggcggttttagacatacccctatgct 8678727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 54 - 242
Target Start/End: Complemental strand, 18984666 - 18984478
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18984666 aaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18984567  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||| |||||||||||||| ||||||||||    
T  18984566 gttgcatttttcgtcctacctcctattttcaaactctagaaacacagagaaatggcagttttaggcggttttagaccttcccctatgct 18984478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 55 - 242
Target Start/End: Complemental strand, 15173639 - 15173453
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  15173639 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcc-ttttaaaacagaacaaaatggtccttcaattatcatttttg 15173541  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15173540 ttgcatttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 15173453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 55 - 242
Target Start/End: Original strand, 15646191 - 15646378
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  15646191 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcatttttg 15646290  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  15646291 ttgcatttttcgtcctacctcatattttcaaactccataaatgcagagaaatgacagttttaggcggttttagacctacccctatgct 15646378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 56 - 216
Target Start/End: Complemental strand, 29307487 - 29307327
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29307487 ggcttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307388  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29307387 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 29307327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 56 - 229
Target Start/End: Original strand, 26859059 - 26859232
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26859059 ggcttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 26859158  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagac 229  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| | | ||||||| ||||||||||||    
T  26859159 tgcatttttcgtcctacctcatattttcaaactccagaaacgcagagaagtaatagttttaggcggttttagac 26859232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 54 - 216
Target Start/End: Complemental strand, 15646742 - 15646581
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15646742 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 15646643  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  15646642 gttgcatttttcgtcctacccccaatttt-attctccaaaaacgcagagaaatgacagtttta 15646581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 9019509 - 9019348
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||| | ||||| ||||||||||||||||||||||| |||||||||||||||||    
T  9019509 aggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcatttttg 9019410  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  9019409 ttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaataacagtttta 9019348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 52 - 216
Target Start/End: Complemental strand, 50970827 - 50970664
Alignment:
Q  52 taaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 151  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  50970827 taaaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 50970728  T
Q  152 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  50970727 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 50970664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 57 - 240
Target Start/End: Original strand, 5962579 - 5962762
Alignment:
Q  57 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 156  Q
    ||||||||||| |||||||||||||||| ||| ||| ||||||||||| ||| ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  5962579 gcttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgtt 5962678  T
Q  157 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatg 240  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||| || ||||||||||    
T  5962679 gcatttttcgttctacctcctattttcaaactccagaaacacagagtaatgacagttttaggcggttttaaacttacccctatg 5962762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 53 - 216
Target Start/End: Complemental strand, 5540366 - 5540204
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 152  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||    
T  5540366 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcatttt 5540267  T
Q  153 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  5540266 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 5540204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 18984118 - 18984278
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18984118 aggcttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 18984217  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||| || ||||| |  ||||| |||||||||||||||| |||||||    
T  18984218 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgatagtttta 18984278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 56 - 216
Target Start/End: Original strand, 29306953 - 29307112
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||    
T  29306953 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307052  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  29307053 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 29307112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 54 - 216
Target Start/End: Complemental strand, 5963125 - 5962964
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||| ||||||||||||||||    
T  5963125 aaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcattttt 5963026  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  5963025 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 5962964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 54 - 216
Target Start/End: Original strand, 29869618 - 29869779
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||    
T  29869618 aaggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattattattttt 29869717  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||||||  || ||||| |  ||||| ||||||||||||||||||||||||    
T  29869718 gttgcatttttcgtcctacaccccatttt-attctccaaaaacgcagagaaatgacagtttta 29869779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 58 - 216
Target Start/End: Complemental strand, 33144462 - 33144305
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||| ||||||||||||||    
T  33144462 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgttg 33144363  T
Q  158 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  33144362 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 33144305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 56 - 216
Target Start/End: Complemental strand, 8679086 - 8678928
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  8679086 ggcttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcatttttgt 8678987  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||||| ||||| |  ||||| ||| ||||||||||||||||||||    
T  8678986 tgcatttttcgtcctacctcc-atttt-attctccaaaaatgcagagaaatgacagtttta 8678928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 56 - 216
Target Start/End: Complemental strand, 21856588 - 21856429
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||     
T  21856588 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgc 21856489  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||||  || ||||| |  ||||| ||||||||||||||||||||||||    
T  21856488 tgcatttttcgtcctactccccatttt-attctccaaaaacgcagagaaatgacagtttta 21856429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 56 - 242
Target Start/End: Original strand, 17112282 - 17112467
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||||||||||||| ||| |||||||  ||||||| |||| || |   |||||||||||| |||| ||||  |||||||||||||||||||| |    
T  17112282 ggcttaattacacttttggttctcatgttttgatctactcatgaaattggtag-gcccttttaaaatagaataaaatagtccttcaattatcatttttat 17112380  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||    
T  17112381 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgatagttttaggcggttttagacctacccctatgct 17112467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 15173099 - 15173255
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  15173099 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttgttgc 15173198  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  15173199 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 15173255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 56 - 216
Target Start/End: Original strand, 17433216 - 17433375
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||    
T  17433216 ggcttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 17433315  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||| ||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  17433316 tgcatttttcatcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 17433375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 26859605 - 26859446
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26859605 aggcttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcatttttg 26859506  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||| || ||||  |  ||||| |||||||||||||| | |||||||    
T  26859505 ttgcatttttcgtcctaccccccattt--attctccaaaaacgcagagaaataatagtttta 26859446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 55 - 206
Target Start/End: Original strand, 9018972 - 9019122
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||| ||||| |||||||||||    
T  9018972 aggcttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcatttttg 9019071  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaat 206  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||||||||||    
T  9019072 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 9019122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 58 - 216
Target Start/End: Original strand, 39154021 - 39154178
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    ||||||||||||||||||| || ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39154021 cttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttg 39154120  T
Q  158 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||| || ||| | |  ||||| ||||||| ||||||||||||||||    
T  39154121 catttttcgtcctaccccccattct-attctccaaaaacgcatagaaatgacagtttta 39154178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 54 - 182
Target Start/End: Original strand, 52268288 - 52268416
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||||||| ||| |||| |||||||||||    
T  52268288 aaggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcattttt 52268387  T
Q  154 gttgcatttttcgtcctacctcctatttt 182  Q
    |||||| ||||||||||||| || |||||    
T  52268388 gttgcacttttcgtcctaccccccatttt 52268416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 58 - 172
Target Start/End: Complemental strand, 52269291 - 52269177
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    |||||||||||||||||||||||||||||| | |||||| ||||  | | ||||||||||||||||||||||||  ||| |||| |||||||||||||||    
T  52269291 cttaattacacttttggtcctcgtgttttgacttactcatgaaatcggttctgcccttttaaaacagaacaaaaatgtcattcagttatcatttttgttg 52269192  T
Q  158 catttttcgtcctac 172  Q
    || ||||||||||||    
T  52269191 cacttttcgtcctac 52269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 2733503 - 2733416
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaa 142  Q
    ||||||||||| |||||||||||| ||||||||||||| || ||||| || |||||||||||||||||||||||||||||||||||||    
T  2733503 aggcttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 156
Target Start/End: Complemental strand, 47827125 - 47827033
Alignment:
Q  64 tacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 156  Q
    |||||||||| ||  | ||||||||||||||||||||| || || |||||||||||||||||||||||  |||||| ||||||||||||||||    
T  47827125 tacacttttgatctccttgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcctttaattatcatttttgtt 47827033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 44802718 - 44802558
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||| |  ||||| ||  ||||||||| || || ||||  ||| |||| ||||||||  |||| | || |||||| |||     
T  44802718 aggcttaattacacttttggtccttgcattttgaccagctcacgaaagtggtcatgcctctttcaaacggaacaaaatcgtccctaaactatcatgtttt 44802619  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| |||| || ||||||||||||||| |||||||||||| |||| |||||||| |||||    
T  44802618 ttgcagttttagttctacctcctattttc-aactccagaaacacagaaaaatgacaatttta 44802558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 131
Target Start/End: Original strand, 47826966 - 47827039
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaa 131  Q
    ||||||||||||||||||||||||||||||| |||||||||||| || || ||||||||||||| | |||||||    
T  47826966 cttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 216
Target Start/End: Original strand, 4636033 - 4636131
Alignment:
Q  116 ttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 215  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||| || ||||| || ||||| |  || || |||||||||||||||||||||||    
T  4636033 ttaaaacagaacaaa-cggtccttcaagtatcatttttgttgcattttttgttctaccccccatttt-attcttcaaaaacgcagagaaatgacagtttt 4636130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 236
Target Start/End: Complemental strand, 45048678 - 45048504
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    ||||||||||||||||||||||  ||||| ||   |||||||| || || | ||  |||  ||  ||||||||| |||||  || |||||| ||| ||||    
T  45048678 ttaattacacttttggtcctcgcattttgaccagttcacgaaaatggtcatacctctttccaatcgaacaaaaccgtccta-aactatcatgttttttgc 45048580  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccc 236  Q
    | |||| |||||||||||||||||| ||||||||||||||||||||||  | | ||||||| ||||||||||||||||    
T  45048579 agttttagtcctacctcctattttc-aactccagaaacgcagagaaatagccg-tttatgcagttttagacctacccc 45048504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 17088686 - 17088527
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    |||||||||||||||||||||||||   |||||  |  ||||||||| || || |||| |||| ||| || |||||||| |||| | || ||| || |||    
T  17088686 aggcttaattacacttttggtcctctcattttgaacagctcacgaaaatggtcatgcctctttcaaatca-aacaaaaccgtccctaaactat-atattt 17088589  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
     ||||| |||| || |||||||||||||||||| || ||||||||||||||||||||||||||    
T  17088588 tttgcagttttagttctacctcctattttcaaa-tctagaaacgcagagaaatgacagtttta 17088527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 216
Target Start/End: Complemental strand, 44954776 - 44954613
Alignment:
Q  52 taaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 151  Q
    |||| ||||||||||||||||||||||||  ||||| || ||||| |||| ||||| | || |||| |||   |||||||   ||| | || ||| || |    
T  44954776 taaaagcttaattacacttttggtcctcgcattttgaccaactcatgaaaatgatcataccttttttaaatcaaacaaaatcatccataaactat-atgt 44954678  T
Q  152 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    || ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  44954677 tttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 44954613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 17088243 - 17088309
Alignment:
Q  149 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| ||||| |||| |||||||||||||||||| |||| |||||| ||||||||||| ||||||||    
T  17088243 ttttttttgcaattttagtcctacctcctattttc-aacttcagaaatgcagagaaatggcagtttta 17088309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 9992153 - 9992314
Alignment:
Q  55 aggcttaattacacttttggtcct-cgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    |||||||||||||||||||||||| |   ||||| || ||||||| || || ||||  | |||| |||  |||||||| ||||||| || ||| || |||    
T  9992153 aggcttaattacacttttggtcctaccatttttgaccaactcacggaaatggtcctatcttttttaaatcgaacaaaatggtccttaaactat-atgttt 9992251  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
     ||||| |||| |||||| ||||   |||| |||||||||||| || ||||||||||||||||    
T  9992252 tttgcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagtttta 9992314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 117
Target Start/End: Complemental strand, 52235215 - 52235153
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgccctttt 117  Q
    ||||||||||||||||||| |||||   ||||  || ||||||||||||||||||||||||||    
T  52235215 aggcttaattacacttttgatcctcagattttaaccaactcacgaaactgatcctgccctttt 52235153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 216
Target Start/End: Original strand, 10278544 - 10278708
Alignment:
Q  52 taaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaaacagaacaaaacggtccttcaattatcatt 150  Q
    ||||| ||||||||||||||||||||| |  ||||| || |||||||||| ||||||| || |||||||| | ||||||||  |||| | || |||   |    
T  10278544 taaagacttaattacacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatc-gaacaaaatcgtccctaaactatatgt 10278642  T
Q  151 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||| ||||| |||| |||||| ||||   |||  ||||||||||||||| | |||||||| |||||    
T  10278643 ttttttgcagttttagtcctatctccccatttgcaactccagaaacgcacataaatgacaatttta 10278708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 215
Target Start/End: Complemental strand, 29021412 - 29021252
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatt-ttt 153  Q
    |||||||||| ||||||||||||||   ||||| ||  ||||||||| || || ||||  ||| |||  ||||||||  |||| | ||||||||   |||    
T  29021412 aggcttaattgcacttttggtcctcacattttgaccagctcacgaaaatgttcatgcctctttcaaatcgaacaaaatcgtccctaaattatcacggttt 29021313  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 215  Q
     ||||| |||| ||| |||| ||||||||||| ||||||||||||| | |||||||||||||    
T  29021312 tttgcagttttagtcttaccccctattttcaa-ctccagaaacgcacataaatgacagtttt 29021252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 39485068 - 39485223
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    ||||||||||||||||||||||  ||||| |   ||||||||| || |||| ||  ||| |||  ||||||||  |||| | || ||| || ||| ||||    
T  39485068 ttaattacacttttggtcctcgcattttgactagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactat-atgttttttgc 39485166  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    | |||| |||||| ||||||||||||| || ||||||| |||||| ||||||||||||    
T  39485167 agttttagtcctatctcctattttcaa-cttcagaaacacagagagatgacagtttta 39485223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 45048253 - 45048313
Alignment:
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| |||| |||||||||| ||||||||| ||||||||||||| |||||| |||||||||    
T  45048253 ttgcagttttagtcctacctcatattttcaa-ctccagaaacgcatagaaataacagtttta 45048313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 50419806 - 50419725
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtcc 137  Q
    ||||||||| ||||||||||| |||  ||| | || |||||||||| || ||||||| ||||||||  ||||||||||||||    
T  50419806 ggcttaattgcacttttggtcatcgcatttagaccaactcacgaaattggtcctgcctttttaaaattgaacaaaacggtcc 50419725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 8229732 - 8229799
Alignment:
Q  149 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  8229732 ttttttttgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagtttta 8229799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 17641818 - 17641751
Alignment:
Q  149 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  17641818 ttttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 17641751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 9833599 - 9833539
Alignment:
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| |||| |||||||| ||||||||||| ||||||||||||| |||||| ||| |||||    
T  9833599 ttgcagttttagtcctaccccctattttcaa-ctccagaaacgcacagaaataacattttta 9833539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 44291769 - 44291701
Alignment:
Q  144 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtt 213  Q
    |||||| ||| ||||| |||| |||||||| ||||||||| |||||||||||| || ||||||| |||||    
T  44291769 tatcatgttttttgcagttttagtcctaccccctattttc-aactccagaaacacatagaaatggcagtt 44291701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 8230064 - 8230028
Alignment:
Q  180 tttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  8230064 tttccaactccagaaacgcacagaaatgacagtttta 8230028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 29438927 - 29438975
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaa 101  Q
    |||||||||||||||||||||||||| |  ||||| || ||||||||||    
T  29438927 aaaggcttaattacacttttggtccttgcattttgaccaactcacgaaa 29438975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 34555803 - 34555767
Alignment:
Q  180 tttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  34555803 tttccaactccagaaacgcacagaaatgacagtttta 34555767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 44954349 - 44954385
Alignment:
Q  180 tttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  44954349 tttccaactccagaaacgcacagaaatgacagtttta 44954385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 169; Significance: 1e-90; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 54 - 242
Target Start/End: Original strand, 18450828 - 18451016
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18450828 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcattttt 18450927  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
     |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18450928 tttgcatttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 18451016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 58 - 242
Target Start/End: Original strand, 40815347 - 40815531
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  40815347 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatcatttttgttg 40815446  T
Q  158 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  40815447 catttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 40815531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 55 - 242
Target Start/End: Complemental strand, 22374871 - 22374684
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||    
T  22374871 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 22374772  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| ||||||||||    
T  22374771 ttgcatttttcgtcctacctcctattttcaaactctagaaatgcagagaaatgacagttttaggcggttttagaccttcccctatgct 22374684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 55 - 242
Target Start/End: Complemental strand, 43058878 - 43058692
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |    
T  43058878 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatcatttt-g 43058780  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  43058779 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 43058692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 55 - 243
Target Start/End: Complemental strand, 7446892 - 7446704
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||| ||||| ||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7446892 aggcttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 7446793  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgctt 243  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| | |||||||    
T  7446792 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttagacctactcatatgctt 7446704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 54 - 242
Target Start/End: Complemental strand, 28617161 - 28616973
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||| |||||||||||||||||||||    
T  28617161 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcattttt 28617062  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||| ||| |||||||||||||||||||||    
T  28617061 gttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatagcagttttaggcgattttagacctacccctatgct 28616973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 52 - 240
Target Start/End: Complemental strand, 40027689 - 40027501
Alignment:
Q  52 taaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 151  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||    
T  40027689 taaaggtttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattt 40027590  T
Q  152 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatg 240  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||| |||||||||||||||||| ||||    
T  40027589 ttgttgcatttttcgtcctacctcctattttcaaactccataaacgcagtgaaatggcagttttaggcggttttagacctacccatatg 40027501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 55 - 242
Target Start/End: Complemental strand, 11091066 - 11090879
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||    
T  11091066 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattattg 11090967  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| ||||||    
T  11090966 ttgtatttttcgtcctatctcctattttcaaactccagaaacgcagataaatgacaattttaggcggttttagacctacccatatgct 11090879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 55 - 242
Target Start/End: Complemental strand, 1978655 - 1978468
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1978655 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttg 1978556  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||| |||||||||||||||||||||||| |||||| || ||||||| |||||||||||||||||||||||||| |||||||    
T  1978555 ttgcattttttgtcctacctcctattttcaaactctagaaacacaaagaaatggcagttttatgcggttttagacctacctctatgct 1978468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 57 - 242
Target Start/End: Complemental strand, 239896 - 239711
Alignment:
Q  57 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 156  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  239896 gcttagttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtt 239797  T
Q  157 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    || ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| | |||||||    
T  239796 gcgtttttcgtcatacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctaactctatgct 239711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 26538625 - 26538464
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  26538625 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcatttttg 26538526  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||    
T  26538525 ttgcatttttcgtcctaccccccattttcaaaccccagaaacgcagagaaatgacagtttta 26538464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 56 - 242
Target Start/End: Complemental strand, 3026006 - 3025822
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||| || | |||||||||||||||| |||||||||||||||||||||| ||||||||    
T  3026006 ggcttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattattatttttgt 3025909  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||| ||||||    
T  3025908 tgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaagcgggtttagacctacccatatgct 3025822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 59 - 235
Target Start/End: Original strand, 8425358 - 8425533
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    |||||||||||||||||||| |||||||||||||||||||||| || || | || ||||||||||||||||||||||| |||||||||||||| ||||||    
T  8425358 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggtc-ttcaattatcatttgtgttgc 8425456  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctaccc 235  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  8425457 atttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaagcggttttagacctaccc 8425533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 58 - 242
Target Start/End: Complemental strand, 14432684 - 14432500
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||| || |||| ||||||||||||| |||| ||| |||||||||| ||||||||||    
T  14432684 cttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattatttttgttg 14432585  T
Q  158 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||  ||||||||||||| ||||||    
T  14432584 catttttcatcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcgaatttagacctacccttatgct 14432500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 11090524 - 11090680
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11090524 ttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 11090623  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  11090624 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 11090680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 239352 - 239511
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  239352 aggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 239450  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  239451 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 239511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 22374319 - 22374479
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  22374319 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 22374418  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||| |||||||| |||||||    
T  22374419 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcaaagaaatgatagtttta 22374479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 54 - 216
Target Start/End: Original strand, 40027138 - 40027299
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  40027138 aaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 40027237  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||| ||||||||  | ||||| |  ||||| ||||||||||||||||||||||||    
T  40027238 gttgcattttttgtcctaccctccatttt-attctccaaaaacgcagagaaatgacagtttta 40027299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 40815900 - 40815731
Alignment:
Q  46 aaaagttaaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaatta 145  Q
    |||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||| ||||||||||    
T  40815900 aaaagttttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaatta 40815801  T
Q  146 tcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  40815800 tcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 40815731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 54 - 216
Target Start/End: Original strand, 26538095 - 26538256
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||    
T  26538095 aaggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcattttt 26538194  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||||||| || ||||| |  ||||| |||| ||||||||| |||||||||    
T  26538195 gttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaataacagtttta 26538256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 1978107 - 1978267
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1978107 aggcttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 1978206  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||| |||||  | || ||||| |  ||||| ||||||||||||||||||||||||    
T  1978207 ttgcattttttgtcctgtcccccatttt-attctccaaaaacgcagagaaatgacagtttta 1978267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 18451377 - 18451217
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||  ||||||||| |||||||||||    
T  18451377 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcatttttg 18451278  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||| ||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  18451277 ttgcatttttcttcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 18451217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 56 - 182
Target Start/End: Original strand, 28616613 - 28616739
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  28616613 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 28616712  T
Q  156 tgcatttttcgtcctacctcctatttt 182  Q
    |||| ||||||||||||| || |||||    
T  28616713 tgcaattttcgtcctaccccccatttt 28616739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 53 - 182
Target Start/End: Original strand, 20444746 - 20444875
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 152  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  20444746 aaaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttt 20444845  T
Q  153 tgttgcatttttcgtcctacctcctatttt 182  Q
    ||||||| ||||||||||||| || |||||    
T  20444846 tgttgcagttttcgtcctaccccccatttt 20444875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 56 - 216
Target Start/End: Original strand, 43058333 - 43058492
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||||||||||| |||||||||||||||| |||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43058333 ggcttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgt 43058432  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||| ||||| || ||||| |  ||||| ||||| ||||||||||||||||||    
T  43058433 tgcatttttcgttctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 43058492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 14432145 - 14432301
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||| | |||||||||||||||||| |||||||||||||||    
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgttgc 14432244  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||| |||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  14432245 atttttggtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 14432301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 55 - 174
Target Start/End: Complemental strand, 28847241 - 28847122
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  28847241 aggcttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcatttttg 28847142  T
Q  155 ttgcatttttcgtcctacct 174  Q
    ||||||||||||||||||||    
T  28847141 ttgcatttttcgtcctacct 28847122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 62 - 216
Target Start/End: Original strand, 3025472 - 3025624
Alignment:
Q  62 attacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 161  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3025472 attacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatt 3025571  T
Q  162 tttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||| || ||||| |  ||| | ||||||| ||||||||||||||||    
T  3025572 tttcgtcctacc-cccatttt-attctcaaaaaacgcaaagaaatgacagtttta 3025624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 8425902 - 8425746
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    ||||||||||||||||| || ||||||||| |||||||||||| || |||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  8425902 ttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttgc 8425803  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||| |||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  8425802 atttttcgtcttacccccaatttt-attctccaaaaacgcagagaaatgacagtttta 8425746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 20440577 - 20440461
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  20440577 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcatttttg 20440478  T
Q  155 ttgcatttttcgtccta 171  Q
    ||||| |||||||||||    
T  20440477 ttgcagttttcgtccta 20440461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 7446340 - 7446497
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    |||||||||||||||||||| |||||||||||||| ||||||| |||| || ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7446340 aaggcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 7446439  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtt 213  Q
     |||||||||||||| |||| || ||||| |  ||||| |||||||||||||||||||||    
T  7446440 attgcatttttcgtcatacc-cccatttt-attctccaaaaacgcagagaaatgacagtt 7446497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 35781207 - 35781093
Alignment:
Q  57 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 156  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| || || ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  35781207 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgtt 35781108  T
Q  157 gcatttttcgtccta 171  Q
    |||||||||||||||    
T  35781107 gcatttttcgtccta 35781093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 56 - 182
Target Start/End: Original strand, 35779708 - 35779834
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||||||||||||||||||||||||| | ||||||||||| || ||||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  35779708 ggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcatttttgt 35779807  T
Q  156 tgcatttttcgtcctacctcctatttt 182  Q
    ||||||||| |||||||| || |||||    
T  35779808 tgcattttttgtcctaccccccatttt 35779834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 58 - 182
Target Start/End: Original strand, 8972239 - 8972363
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    |||||||||||||||||||||||||||||||| | ||||||||| || || |||||||| ||||||||||||||  ||| ||||||||||||||||||||    
T  8972239 cttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgttg 8972338  T
Q  158 catttttcgtcctacctcctatttt 182  Q
    |||||||||| ||||| ||||||||    
T  8972339 catttttcgttctaccccctatttt 8972363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 58 - 173
Target Start/End: Complemental strand, 15552596 - 15552482
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    ||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||||||||||||||||||  ||| ||||||||||||||||||||    
T  15552596 cttaattacacttttggtcataatgttttggcctactcacgaaaatgatcc-gcccttttaaaacagaacaaaattgtcattcaattatcatttttgttg 15552498  T
Q  158 catttttcgtcctacc 173  Q
     |||||||||||||||    
T  15552497 tatttttcgtcctacc 15552482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 58 - 169
Target Start/End: Original strand, 15551501 - 15551612
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    |||||||||||||||||||||||||||||||  ||||||||||| || || |||| |||||||||| |||||||  |||||||| |||||||||||||||    
T  15551501 cttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttg 15551600  T
Q  158 catttttcgtcc 169  Q
    ||||||||||||    
T  15551601 catttttcgtcc 15551612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 28143576 - 28143417
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||| |||||||||||||||  ||||| ||  ||||||||| || |||||||  ||| |||  ||||||||  |||| | || |||||| |||     
T  28143576 aggcttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatgttt- 28143478  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| |||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  28143477 ttgcagttttagtcctacgtcctattttcaa-ctccagaaacgcagagaaatgacagtttta 28143417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 215
Target Start/End: Complemental strand, 31797326 - 31797166
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 152  Q
    |||||||||||||||||||||||||||   ||||| ||  ||||||||| || || ||||  ||| |||  ||||||||| |||| | || ||| || ||    
T  31797326 aaaggcttaattacacttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactat-atgtt 31797228  T
Q  153 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 215  Q
    | ||||| |||| |||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  31797227 ttttgcagttttagtcctacctcctattttcaa-ctctagaaacgcagagaaatgacagtttt 31797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 44219643 - 44219803
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||||||    |||||  | |||||| ||| ||||||| || |||| |||  ||||||||  |||||| |||||| || |||     
T  44219643 aggcttaattacacttttggtccttccattttgatcaactcacaaaaatgatcctaccttttttaaatcgaacaaaattgtccttaaattat-atgtttt 44219741  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  44219742 ttgcagttttagtcctatctccctgtttccaactccagaaacgcacagaaatgacagtttta 44219803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 14942393 - 14942231
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatca--tttt 152  Q
    |||||||||||||||||||||| |||  ||||| ||  ||||||||| || || || |  ||| |||  ||||||||  |||| | ||||||||  ||||    
T  14942393 aggcttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaattgtccataaattatcatgtttt 14942294  T
Q  153 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    | ||||| |||| ||||||| |||||||||| ||||||||||| ||||||||||  ||||||||    
T  14942293 ttttgcagttttagtcctacatcctattttc-aactccagaaatgcagagaaatcgcagtttta 14942231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 216
Target Start/End: Original strand, 4355755 - 4355914
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||||| |  ||||| ||||||||||||| || || | || |||||||| | ||||||||  |||| | || ||| || |||     
T  4355755 ggcttaattacacttttggtccttgcattttgacctactcacgaaattggtcatacctcttttaaatc-gaacaaaatcgtccctaaactat-atgtttt 4355852  T
Q  155 ttgcatttttcgtcctacct-cctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| |||| |||||| || ||||||||| ||||||||||||||| | ||||||||||||||    
T  4355853 ttgcagttttagtcctatctccctattttc-aactccagaaacgcacataaatgacagtttta 4355914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 20128284 - 20128124
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    |||||||||||||||||||||||| |  ||||  || |||||||||| || |||| || |||||||| || |||||||  |||||| || ||| || |||    
T  20128284 aggcttaattacacttttggtccttgcatttttaccaactcacgaaattggtcctacctcttttaaatca-aacaaaatcgtccttaaactat-atgttt 20128187  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
     ||||| |||| |||||| ||||   |||| ||||||||||||||| | ||||||||||||||    
T  20128186 tttgcaattttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagtttta 20128124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 25473018 - 25473068
Alignment:
Q  5 cacaaacatgaaaacgggctaagccaccaatcatgataaccaaaagttaaa 55  Q
    ||||||||||| |||||| ||||||||||||||||||||||| ||||||||    
T  25473018 cacaaacatgagaacgggttaagccaccaatcatgataaccataagttaaa 25473068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 216
Target Start/End: Complemental strand, 42192793 - 42192629
Alignment:
Q  52 taaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaaacagaacaaaacggtccttcaattatcatt 150  Q
    |||||||||||||||||||||||||||||  ||||| || |||||||||| || |||| || |||||||| | ||||||||  |||| | || ||    |    
T  42192793 taaaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatc-gaacaaaatcgtccctaaactagatgt 42192695  T
Q  151 tttgttgcatttttcgtccta-cctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||| ||||| |||| ||| || || |||| |||| ||||||||||||||| ||||||||||||||||    
T  42192694 ttttttgcagttttagtcatatcccccta-tttccaactccagaaacgcacagaaatgacagtttta 42192629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 62956 - 63116
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||| |||||||    ||||| || |||||||||| || |||| || ||||||||  ||||||||  |||||| || ||| || |||     
T  62956 aggcttaattacacttatggtccttccattttgaccaactcacgaaaatggtcctacctttttaaaatcgaacaaaatcgtccttaaactat-atgtttt 63054  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| |||| |||||| ||||   |||| ||||| ||||||||| | ||||||||||||||    
T  63055 ttgcagttttagtcctatctccctatttccaactcaagaaacgcacataaatgacagtttta 63116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 216
Target Start/End: Original strand, 42192240 - 42192399
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||||||||||||||||   ||||| || |||||||||| || |||| || |||||||| | ||||||||  |||| | || ||| || |||     
T  42192240 ggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatc-gaacaaaatcgtccctaaactat-atgtttt 42192337  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| |||| |||||| ||||   |||| ||||||||||||||| | ||||||||||||||    
T  42192338 ttgcagttttagtcctatctccctatttctaactccagaaacgcacataaatgacagtttta 42192399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 130
Target Start/End: Original strand, 3822924 - 3822995
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaa 130  Q
    ||||||||||||||||||||||  ||||  || ||||| |||| ||||||||||||||| |||| |||||||    
T  3822924 ttaattacacttttggtcctcgcattttaaccaactcatgaaattgatcctgccctttttaaaccgaacaaa 3822995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 216
Target Start/End: Complemental strand, 16953479 - 16953321
Alignment:
Q  57 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    |||||||||||||||||||||| |  ||||| || ||||| |||| || |||| || |||||||| | ||||||||  |||| | || ||| || ||| |    
T  16953479 gcttaattacacttttggtccttgcattttgaccaactcatgaaattggtcctacctcttttaaatc-gaacaaaaatgtccctaaagtat-atgttttt 16953382  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||| |||| |||||| ||||   |||| ||||||| ||||||| ||||||||||||||||    
T  16953381 tgcagttttagtcctatctccctatttccaactccaaaaacgcacagaaatgacagtttta 16953321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 33920615 - 33920771
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    ||||||||| |||||||||| |  ||||| || |||||||||| ||||| | || |||||||| | ||||||||  |||| | || ||| ||  || |||    
T  33920615 ttaattacatttttggtccttgcattttgaccaactcacgaaattgatcatacctcttttaaatc-gaacaaaatcgtccctaaactat-atgatttttg 33920712  T
Q  158 catttttcgtcctacctcc-tattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    || |||| |||||| |||| ||||||||| ||||||||||||| ||||||||||||||||    
T  33920713 cagttttagtcctatctccctattttcaa-ctccagaaacgcatagaaatgacagtttta 33920771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 216
Target Start/End: Complemental strand, 38008500 - 38008338
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 152  Q
    ||||||||||||||||||||||||||    ||||| || |||||||||| || ||||  | |||| |||  ||||||||  |||||| || ||| || ||    
T  38008500 aaaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtt 38008402  T
Q  153 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    | ||||| |||| |||||| ||||   |||| ||||||| ||||||| | |||||| |||||||    
T  38008401 ttttgcagttttagtcctatctccctatttccaactccataaacgcacataaatgatagtttta 38008338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 216
Target Start/End: Complemental strand, 43160560 - 43160397
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 152  Q
    ||||||||||||||||||| ||||||    ||||| |  |||||||||| || ||||  | |||| |||  |||| |||  |||||| || |||   |||    
T  43160560 aaaggcttaattacactttaggtcctaccattttgacaaactcacgaaaatggtcctatcttttttaaatcgaactaaatcgtccttaaactatatgttt 43160461  T
Q  153 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    | ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  43160460 ttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 43160397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 43216256 - 43216096
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    |||||||||||||||||| ||||| | |||||| || |||||||||| || |||| || |||||||| | ||||||||  |||| | || ||| || |||    
T  43216256 aggcttaattacacttttagtccttgcgttttgaccaactcacgaaattggtcctacctcttttaaatc-gaacaaaatcgtccctaaactat-atattt 43216159  T
Q  154 gttgcatttttcgtcctacctc-ctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
     ||||| |||| |||||| ||| ||| |||| ||||||||||| ||| |||||||||| |||||    
T  43216158 tttgcagttttagtcctatctctcta-tttccaactccagaaatgcacagaaatgacaatttta 43216096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 11540185 - 11540025
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcc-cttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    ||||||||||| |||||||||| |||  ||||| || |||||||||| || |||| || |||||||| | ||||||||  |||| | || ||| || |||    
T  11540185 aggcttaattatacttttggtcatcgcattttgaccaactcacgaaaatggtcctacctcttttaaatc-gaacaaaatcgtccataaactat-atgttt 11540088  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
     ||||| |||| ||| ||  |||   |||| ||||||||||||||| ||||||||||||||||    
T  11540087 tttgcagttttagtcatatatccctatttccaactccagaaacgcacagaaatgacagtttta 11540025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 44220196 - 44220146
Alignment:
Q  51 ttaaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaa 101  Q
    |||||||||||||||||||||| |||||||  ||||| || ||||||||||    
T  44220196 ttaaaggcttaattacactttttgtcctcgcattttgaccaactcacgaaa 44220146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 5560998 - 5560937
Alignment:
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  5560998 ttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 5560937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 13399520 - 13399581
Alignment:
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  13399520 ttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 13399581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 15550793 - 15550833
Alignment:
Q  175 cctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||| ||||||||||||| ||||||||||||||||    
T  15550793 cctattttcaa-ctccagaaacgcacagaaatgacagtttta 15550833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 4356179 - 4356143
Alignment:
Q  180 tttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  4356179 tttccaactccagaaacgcacagaaatgacagtttta 4356143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 4809002 - 4809038
Alignment:
Q  180 tttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  4809002 tttccaactccagaaacgcacagaaatgacagtttta 4809038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 166; Significance: 6e-89; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 55 - 240
Target Start/End: Complemental strand, 2213 - 2028
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2213 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 2114  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatg 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  2113 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttaggcggttttagacctacccctatg 2028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 48 - 216
Target Start/End: Original strand, 1659 - 1826
Alignment:
Q  48 aagttaaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatc 147  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||    
T  1659 aagttataggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatc 1758  T
Q  148 atttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  1759 atttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 1826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 152; Significance: 1e-80; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 56 - 235
Target Start/End: Complemental strand, 11168 - 10989
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11168 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgt 11069  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctaccc 235  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||| ||||||||||||||||||    
T  11068 tgcatttttcgtcctacctcctattttcaaactcgagaaacgcagagaaattgcagttttaggcggttttagacctaccc 10989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 75 - 216
Target Start/End: Original strand, 10640 - 10780
Alignment:
Q  75 tcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacct 174  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||     
T  10640 tcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccc 10739  T
Q  175 cctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
     | ||||| |  ||||| ||| ||||||||||||||||||||    
T  10740 tccatttt-attctccaaaaatgcagagaaatgacagtttta 10780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 144; Significance: 8e-76; HSPs: 5)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 51 - 242
Target Start/End: Complemental strand, 64855 - 64664
Alignment:
Q  51 ttaaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 150  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||    
T  64855 ttaaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcatt 64756  T
Q  151 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||||| || |||||||||||||||||||||| ||| |||| ||||||||| ||||||||||||||||| |||||||    
T  64755 tttgttgcatttttcgtcctatcttctattttcaaactccagaaacggagaaaaataacagttttaggcggttttagacctacctctatgct 64664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 54 - 216
Target Start/End: Original strand, 64300 - 64461
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  64300 aaggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcattttt 64399  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||| |||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  64400 gttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagtttta 64461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 216
Target Start/End: Complemental strand, 205911 - 205755
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    ||||||||||||||| ||||||   ||||| || |||||||||| || |||||||  ||| |||  ||||||||| |||| | || |||||| ||| |||    
T  205911 cttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatgttt-ttg 205813  T
Q  158 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    || |||| ||||||| |||||||||||| ||||| ||||||||||||||| ||||||||    
T  205812 cagttttagtcctacgtcctattttcaa-ctccaaaaacgcagagaaatggcagtttta 205755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 205038 - 205109
Alignment:
Q  144 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||| |||||| ||||||||||  |||||||    
T  205038 tatcatgttttttgcagttttagtcctacctcctattttc-aactctagaaacacagagaaatggaagtttta 205109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 210885 - 210786
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    ||||||||||||||||||||||||||   ||||| || ||||| |||| || |||||||  ||| |||  ||||||||| |||| | || ||||||||||    
T  210885 aaggcttaattacacttttggtcctcacattttgaccaactcatgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcattttt 210786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 134; Significance: 8e-70; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 73 - 242
Target Start/End: Complemental strand, 17024 - 16855
Alignment:
Q  73 ggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctac 172  Q
    ||||||||||||||| | |||||||||||||||||| ||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  17024 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 16925  T
Q  173 ctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||    
T  16924 ctcctattttcaaactccagaaacgcagagaaattacagttttaggcgattttagacctacccctatgct 16855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 124 - 216
Target Start/End: Original strand, 16564 - 16655
Alignment:
Q  124 gaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  16564 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagtttta 16655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 133; Significance: 3e-69; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 56 - 216
Target Start/End: Complemental strand, 1286 - 1126
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 155  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1286 ggcttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 1187  T
Q  156 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||    
T  1186 tgcatctttcgtcctacctcctattttcaaaccccagaaacgcagaaaaatggcagtttta 1126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 58 - 216
Target Start/End: Original strand, 755 - 911
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  755 cttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttgttg 853  T
Q  158 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||| |||||||||    
T  854 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagtttta 911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 54 - 216
Target Start/End: Original strand, 42167 - 42329
Alignment:
Q  54 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    |||| |||||||||||||| || |||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  42167 aaggtttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcattttt 42266  T
Q  154 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  42267 gttgcattttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagtttta 42329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 42704 - 42545
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    ||||||||||| |||||||| ||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  42704 aggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcatttttg 42605  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    || |||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  42604 tttcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagtttta 42545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 4792 - 4952
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  4792 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 4891  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||| || ||||| |  ||||| |||||||||||||| |||||||||    
T  4892 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagtttta 4952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 5334 - 5160
Alignment:
Q  58 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 157  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| || || ||||||||||||||| ||||||||  ||||||||||||||||||||    
T  5334 cttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgttg 5235  T
Q  158 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccc 236  Q
    ||||||||||    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||    
T  5234 catttttcgt----cctcctattttcaaactccagaaacgcagaaaaatgacagttttaggcggttttagacttacccc 5160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 95 - 242
Target Start/End: Original strand, 4242 - 4389
Alignment:
Q  95 cacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaa 194  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||    
T  4242 cacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctattttcaaactctaaaa 4341  T
Q  195 acgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    | |||||||||||||||||||| |||||||||||||||||||||||||    
T  4342 atgcagagaaatgacagttttaggcggttttagacctacccctatgct 4389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 4753 - 4593
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  4753 aggcttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcatttttg 4654  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||| || ||||| |  ||||| |||| |||||||||||||||||||    
T  4653 ttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagtttta 4593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 134219 - 134059
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||| ||||||||||||| ||||||||||| ||||||||    
T  134219 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacatttttg 134120  T
Q  155 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  134119 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 134059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 59 - 242
Target Start/End: Original strand, 9935 - 10116
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    ||||||||| |||||||||||||||||| ||||| |||||||||||||| ||||||||||| | ||||||||| |||||||||||||||| ||||||| |    
T  9935 ttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaattttgttac 10034  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 242  Q
    | ||||| ||||||||||||||||||||||| ||||||| |||||||||||| ||||| ||||||||| || ||||||||||||    
T  10035 a-ttttcatcctacctcctattttcaaactcaagaaacg-agagaaatgacaattttaggcggttttaaacatacccctatgct 10116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 10414 - 10259
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |  | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  159 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||||||| || ||||| |  ||||| |||  |||||||||||||||||||    
T  10314 atttttcgtcctacc-cccatttt-attctccaaaaattcagagaaatgacagtttta 10259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 97; Significance: 9e-48; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 52 - 216
Target Start/End: Original strand, 18831 - 18993
Alignment:
Q  52 taaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 151  Q
    ||||||||| |||||||||||||||||  |||||||||||||||||||||||| || ||||||||||||||| ||||||||||| |||||||||||||||    
T  18831 taaaggcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatcattt 18930  T
Q  152 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    |||||||||||||| ||||||| || ||||| |  ||||| |||||||||||||| |||||||||    
T  18931 ttgttgcatttttcatcctacc-cccatttt-attctccaaaaacgcagagaaataacagtttta 18993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 56 - 153
Target Start/End: Complemental strand, 19166 - 19069
Alignment:
Q  56 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19166 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 57 - 181
Target Start/End: Original strand, 568 - 692
Alignment:
Q  57 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 156  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  568 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcatttttgtt 667  T
Q  157 gcatttttcgtcctacctcctattt 181  Q
    | ||||||||||  |||||| ||||    
T  668 gtatttttcgtctcacctcccattt 692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 53 - 170
Target Start/End: Complemental strand, 28791 - 28674
Alignment:
Q  53 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 152  Q
    |||||| ||||||||||||||||| ||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||| |||||||||||||||    
T  28791 aaaggcataattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcatttt 28692  T
Q  153 tgttgcatttttcgtcct 170  Q
    ||||||| ||||||||||    
T  28691 tgttgcagttttcgtcct 28674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 59 - 159
Target Start/End: Complemental strand, 8551 - 8451
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    |||||||||||||||||| || |||||||| ||||| ||||||||| |||| ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  8551 ttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcatttttgttgc 8452  T
Q  159 a 159  Q
    |    
T  8451 a 8451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 60 - 172
Target Start/End: Original strand, 454 - 565
Alignment:
Q  60 taattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgca 159  Q
    |||||||| |||||||| |||||||||||||||||||||||| || || ||  ||||||||||| |||| ||  ||||||||||||||||||||||||||    
T  454 taattaca-ttttggtcttcgtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatcatttttgttgca 552  T
Q  160 tttttcgtcctac 172  Q
    |||||||||||||    
T  553 tttttcgtcctac 565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 182
Target Start/End: Complemental strand, 62000 - 61877
Alignment:
Q  59 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 158  Q
    ||||||||||||||| |||||||||||||| |||||||||||| || |||| ||||||||||| |||||||||   || ||||| |||||||||||||      
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcatttttgttat 61901  T
Q  159 atttttcgtcctacctcctatttt 182  Q
    ||||||||||||||| || |||||    
T  61900 atttttcgtcctaccccccatttt 61877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 130
Target Start/End: Original strand, 61027 - 61102
Alignment:
Q  55 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaa 130  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||    
T  61027 aggcttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaacaaa 61102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 106 - 182
Target Start/End: Complemental strand, 7783 - 7707
Alignment:
Q  106 tcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctatttt 182  Q
    |||| |||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||| ||||||||    
T  7783 tccttcccttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcctaccccctatttt 7707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 6818 - 6778
Alignment:
Q  175 cctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||| ||||||||||||| ||||||||||||||||    
T  6818 cctattttcaa-ctccagaaacgcacagaaatgacagtttta 6778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 6836 - 6796
Alignment:
Q  175 cctattttcaaactccagaaacgcagagaaatgacagtttta 216  Q
    ||||||||||| ||||||||||||| ||||||||||||||||    
T  6836 cctattttcaa-ctccagaaacgcacagaaatgacagtttta 6796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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