View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18440_high_2 (Length: 732)
Name: NF18440_high_2
Description: NF18440
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18440_high_2 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 670; Significance: 0; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 670; E-Value: 0
Query Start/End: Original strand, 17 - 714
Target Start/End: Original strand, 4679031 - 4679728
Alignment:
| Q |
17 |
cagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttaccccatt |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4679031 |
cagatgaggctgttgcttatggtgcagctatccaagctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttaccccatt |
4679130 |
T |
|
| Q |
117 |
gtcacttggtatccttgttgatgaagataccatgagtgtggtgattcctagaaatacttctgtgcctatcaagaagacagaagaatatgctacccgtgaa |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4679131 |
gtcacttggtatccttgttgatgaagataccatgagtgtggtgattcctagaaatacttctgtgcctatcaagaagacagaagaatatgctacccgtgaa |
4679230 |
T |
|
| Q |
217 |
gataattctggtaccttaattaaggtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttcgtttgatcttttgtgtccagatgctc |
316 |
Q |
| |
|
|||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4679231 |
gataattctgatacctttattaaggtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttcgtttgatcttttgtgtccagatgctc |
4679330 |
T |
|
| Q |
317 |
ctcgtgacacacccttggaggtatgctttgctatagatgcaaatggcaccctaactgtttctgctaaagaaatgtctacaggaaatacgaacaagatcac |
416 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4679331 |
ctcgtggcacacccttggaggtatgctttgctatagatgcaaatggcaccctaactgtttctgctaaagaaatgtctacaggaaatacgaacaagatcac |
4679430 |
T |
|
| Q |
417 |
cataaccaatgaaaaagaaaggttgacaacatttcaagttaaaaaactgattgaagaagctgagaaatatcgcgaggaagataagaaatttttaaggaag |
516 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4679431 |
cataaccaatgaaaaagaaaggttgacaacatttcaagttaaaaaactgattgaagaagctgagaaatatcgcgaggaagataagaaatttttaaggaag |
4679530 |
T |
|
| Q |
517 |
gctaaggtaatgagtgcattggaattttgtgtttacaatatcaagaatgctttaaagaagaaggatgttaatttaaagctctcttgtgatgaaagtgaaa |
616 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4679531 |
gctaaggtaatgagtgcattggaattttgtgtttacaatatcaagaatgctttaaagaagaaggatgttaatttaaagctctcttgtgatgaaagtgaaa |
4679630 |
T |
|
| Q |
617 |
agatcaacgatgcaattacggtggccaccaacttgcttgataagaataacgaacagaaagaaataaatgttcttgaggatcatctgaaggagctggag |
714 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
4679631 |
agatcaacgatgcaattacagtggccaccaacttgcttgataagaataacgaacagaaagaaatagatgttcttgaggatcatctgaaggagttggag |
4679728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 328 - 714
Target Start/End: Complemental strand, 29465229 - 29464842
Alignment:
| Q |
328 |
cccttggaggtatgctttgctatagatgcaaatggcaccctaactgtttctgctaaagaaatgtctacaggaaatacgaacaagatcaccataaccaatg |
427 |
Q |
| |
|
|||||||||||||||||| | || |||| |||||||| |||||||||| ||||||| ||||| ||||| | |||| ||| ||||||||| || |||| |
|
|
| T |
29465229 |
cccttggaggtatgcttttccattgatgaaaatggcatcctaactgttactgctaaggaaatatctactgacaatatgaatgtgatcaccattactaatg |
29465130 |
T |
|
| Q |
428 |
aaaaagaaaggttgacaacatttcaagttaaaaaactgattgaagaagctgagaaatatcgcgaggaagataagaaatttttaaggaaggctaaggtaat |
527 |
Q |
| |
|
||||||||||| |||| || || || ||||| ||||| |||||||||||||||| | | |||||||| | |||| |||||||||| || ||||| |
|
|
| T |
29465129 |
gcaaagaaaggttatcaacgttagaaattgaaaaaatgattaaagaagctgagaaataccatgtggaagatatgcaattcgtaaggaaggccaatgtaat |
29465030 |
T |
|
| Q |
528 |
gagtgcattggaattttgtgtttacaatatcaagaatgctttaaagaagaaggatgttaatttaaagctc-tcttgtgatgaaagtgaaaagatcaacga |
626 |
Q |
| |
|
||||||||| || | ||||||||||||||| |||||| | ||||||||||||| ||||||||| | |||| || | | |||||||| ||||||||| | |
|
|
| T |
29465029 |
gagtgcattagattcttgtgtttacaatatgaagaatacattaaagaagaaggttgttaatttgatgctcttcccatcaagaaagtgagaagatcaacaa |
29464930 |
T |
|
| Q |
627 |
tgcaattacggtggccaccaacttgcttgataagaataacgaacagaaagaaataaatgttcttgaggatcatctgaaggagctggag |
714 |
Q |
| |
|
||||||||| || | || |||||||||||||||||| || ||||||||| | |||||||||||| ||||||| ||||||||||| |
|
|
| T |
29464929 |
tgcaattactgtctctgtgaatttgcttgataagaataacaaaaagaaagaaacagatgttcttgagggtcatctggaggagctggag |
29464842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 339 - 710
Target Start/End: Complemental strand, 15594404 - 15594030
Alignment:
| Q |
339 |
atgctttgctatagatgcaaatggcaccctaactgtttctgctaaagaaatgtctacaggaaatacgaacaagatcaccataaccaatgaaaaagaaagg |
438 |
Q |
| |
|
|||||||||||| |||| ||||| | ||| |||||||||| || |||| || || || ||||| ||| ||||||| ||||||||||| ||||||||| |
|
|
| T |
15594404 |
atgctttgctatcgatgaaaatgctatcctgactgtttctgtgaaggaaacatccactggcaatacaaacgagatcacaataaccaatgacaaagaaagg |
15594305 |
T |
|
| Q |
439 |
ttgacaacatttcaagttaaaaaactgattgaagaagctgagaaatatcgcgaggaagataagaaatttttaaggaaggctaaggtaatgagtgcattgg |
538 |
Q |
| |
|
||| || ||| | || |||||||| ||||| ||||||| ||| ||||||| | |||||| ||||||| |||||||||| ||||||||| |||||| | |
|
|
| T |
15594304 |
ttgtcagcatatgaaattaaaaaaatgattcaagaagccgaggaatatcgtgctgaagatgagaaattcctaaggaaggcggaggtaatgaatgcattag |
15594205 |
T |
|
| Q |
539 |
aattttgtgtttacaatatcaagaatgctttaaagaagaaggatgttaatttaaagctctcttgtgatgaaagtgaaaagatcaacgatgcaattacggt |
638 |
Q |
| |
|
| ||||||||||| | | |||||| | ||||| |||||||| || ||||| ||||||| | | ||| | ||||||||| | ||||||||| || |
|
|
| T |
15594204 |
atgactgtgtttacaagttgagaaatgctctgaagaataaggatgtcaaattaaaactctcttctaaagaagttacaaagatcaatggtgcaattacagt |
15594105 |
T |
|
| Q |
639 |
ggccaccaacttgcttgat---aagaataacgaacagaaagaaataaatgttcttgaggatcatctgaaggagct |
710 |
Q |
| |
|
||| || || ||||||||| ||||||||| | || || ||| || |||||||||||| | || |||||||||| |
|
|
| T |
15594104 |
ggctacaaatttgcttgataagaagaataaccagcataatgaagtagatgttcttgagggtaatttgaaggagct |
15594030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 457 - 714
Target Start/End: Original strand, 29214509 - 29214768
Alignment:
| Q |
457 |
aaaaaactgattgaagaagctgagaaatatcgcgaggaagataagaaatttttaaggaaggctaaggtaatgagtgcattggaattttgtgtttacaata |
556 |
Q |
| |
|
|||||| ||||| |||||||||||||||| | | |||||||| | |||| ||||||||||| ||||||| ||||||||| || | |||||||||||||| |
|
|
| T |
29214509 |
aaaaaattgattaaagaagctgagaaataccatgtggaagatatgcaattcttaaggaaggccaaggtaacgagtgcattagattcttgtgtttacaata |
29214608 |
T |
|
| Q |
557 |
tcaagaatgctttaaag-aagaaggatgttaatttaaagctct-cttgtgatgaaagtgaaaagatcaacgatgcaattacggtggccaccaacttgctt |
654 |
Q |
| |
|
| || ||| |||||||| |||| || ||||||||| ||||||| | | | |||||||| ||||||||| ||| |||||| | | || |||||| |
|
|
| T |
29214609 |
tgaaaaatactttaaagaaagacggttgttaatttgaagctctccccctcaagaaagtgagaagatcaacaatgtaattactatcgttgtgaatttgctt |
29214708 |
T |
|
| Q |
655 |
gataagaataacgaacagaaagaaataaatgttcttgaggatcatctgaaggagctggag |
714 |
Q |
| |
|
|||||||||||| || ||||| ||||| |||||||| ||| |||||| ||||||||||| |
|
|
| T |
29214709 |
gataagaataacaaagagaaataaatagatgttctttagggtcatctcgaggagctggag |
29214768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 15594726 - 15594662
Alignment:
| Q |
19 |
gatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgt |
83 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||| | ||||| ||||||||||| ||||| |
|
|
| T |
15594726 |
gatgaggctgttgcttatggtgcagctgtccaggctgctttgttgagtgaaggttttaaaaatgt |
15594662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 34467264 - 34467367
Alignment:
| Q |
19 |
gatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttaccccattgt |
118 |
Q |
| |
|
||||||||||| ||||||| |||||| | || |||||| | ||||| |||| ||||| ||||| || || || ||||||||||||||||| ||||||| |
|
|
| T |
34467264 |
gatgaggctgtcgcttatgtcgcagctgtgcaagctgctttgttgagtaaaggctttaacaatgttccaaacttggtgctgcgagatgttacaccattgt |
34467363 |
T |
|
| Q |
119 |
cact |
122 |
Q |
| |
|
|||| |
|
|
| T |
34467364 |
cact |
34467367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 234 - 288
Target Start/End: Complemental strand, 15594509 - 15594455
Alignment:
| Q |
234 |
aattaaggtttatgagggtgagagagcaagagcaacagacaacaatctgcttggt |
288 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| | ||||| ||| |||||||| |
|
|
| T |
15594509 |
aattcaggtttatgagggtgagagagcaagagctagtgacaataatttgcttggt |
15594455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 22)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 17 - 713
Target Start/End: Complemental strand, 8659057 - 8658355
Alignment:
| Q |
17 |
cagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttaccccatt |
116 |
Q |
| |
|
||||||||||||||||||||||||||||| | || |||||| |||| ||| |||| |||||||||||||| || || ||||||| ||||||||||||||| |
|
|
| T |
8659057 |
cagatgaggctgttgcttatggtgcagctcttcaagctgctgttttaagcaaaggctttaagaatgtcccaaacttggtgctgcaagatgttaccccatt |
8658958 |
T |
|
| Q |
117 |
gtcacttggtatccttgttgatgaagatac---catgagtgtggtgattcctagaaatacttctgtgcctatcaagaagacagaagaatatgctacccgt |
213 |
Q |
| |
|
||||||||||||| || |||| ||| |||| |||| |||||||| || || ||| |||||||| ||| ||||||| ||| |||||| || || |
|
|
| T |
8658957 |
gtcacttggtatcgcagtagatgttgatcatgtcatgggtgtagtgattccaaggaacactactgtgcctctcaggaagacaaaaggatatgcaactggt |
8658858 |
T |
|
| Q |
214 |
gaagataattctggtaccttaattaaggtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttcgtttgatcttttgtg---tccag |
310 |
Q |
| |
|
|| ||| || | || ||| ||||| |||||||||||||||||||| |||||||||||||||||||||||| | |||| || ||||| |
|
|
| T |
8658857 |
tgtgacaatggtgttgtctcgattcgtgtttacgagggtgagagagcaagagcgctagacaacaatctgcttggttcgttcaaactttcttgccgtccag |
8658758 |
T |
|
| Q |
311 |
atgctcctcgtgacacacccttggaggtatgctttgctatagatgcaaatggcaccctaactgtttctgctaaagaaatgtctacaggaaatacgaacaa |
410 |
Q |
| |
|
||||||||||| ||| |||||||||||||| ||| | || ||| |||||||| |||| ||||| ||||| ||||| ||| ||||||||| |||| | |
|
|
| T |
8658757 |
gtgctcctcgtggcactcccttggaggtatgtttttcaatcaatgaaaatggcattttaacagtttcggctaaggaaatatcttcaggaaatatgaacca |
8658658 |
T |
|
| Q |
411 |
gatcaccataaccaatgaaaaagaaaggttgacaacatttcaagttaaaaaactgattgaagaagctgagaaatatcgcgaggaagataagaaattttta |
510 |
Q |
| |
|
||||||||||| ||||||||||||||| ||| |||||||| || |||| ||| |||||||||||||||||| ||| || |||||||||| |||||||| |
|
|
| T |
8658657 |
gatcaccataaacaatgaaaaagaaagattgtcaacatttgaaattaacaaaatgattgaagaagctgagagataccgtatggaagataaggaattttta |
8658558 |
T |
|
| Q |
511 |
aggaaggctaaggtaatgagtgcattggaattttgtgtttacaatatcaagaatgctttaaagaagaaggatgttaatttaaagctctcttgtgatgaaa |
610 |
Q |
| |
|
|||||||| || ||||||| || ||||| | |||||||||||| | |||||||| ||||| |||||||||||||||||||| ||||| ||| |||| |
|
|
| T |
8658557 |
aggaaggccaaagtaatgaatgatttggattattgtgtttacaaagtgaagaatgcgttaaaaaagaaggatgttaatttaaacctctcccgtggagaaa |
8658458 |
T |
|
| Q |
611 |
gtgaaaagatcaacgatgcaattacggtggccaccaacttgcttgataagaataacgaacagaaagaaataaatgttcttgaggatcatctgaaggagct |
710 |
Q |
| |
|
| |||||||||||| |||||| ||| |||| || ||||||||| || |||||||| ||||| | ||||| ||||| |||||||||||||||||||||| |
|
|
| T |
8658457 |
gggaaaagatcaacaatgcaactaccttggcaacaaacttgcttcatgagaataacaaacagcagaaaatagatgttgttgaggatcatctgaaggagct |
8658358 |
T |
|
| Q |
711 |
gga |
713 |
Q |
| |
|
||| |
|
|
| T |
8658357 |
gga |
8658355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 22 - 714
Target Start/End: Complemental strand, 1301150 - 1300446
Alignment:
| Q |
22 |
gaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttaccccattgtcac |
121 |
Q |
| |
|
|||||||||||||||||||||||||| || ||||||||||| ||| |||| || ||||||||||| || || ||||||| |||||||||||||||||||| |
|
|
| T |
1301150 |
gaggctgttgcttatggtgcagctattcaagctgctattttaagcaaaggattcaagaatgtcccaaacttggtgctgcaagatgttaccccattgtcac |
1301051 |
T |
|
| Q |
122 |
ttggtatccttgttgatgaagataccatgagtgtggtgattcctagaaatacttctgtgcctatcaagaagacagaagaatatgctacccgtgaagataa |
221 |
Q |
| |
|
|||||||| || | ||| || |||||||||||||||||| || || ||| | |||||| ||| ||||||| |||||| | || ||| ||| | |
|
|
| T |
1301050 |
ttggtatcgcagtaggtgatcatgtcatgagtgtggtgattccaaggaacactaccgtgcctgtcaggaagacaaaagaatttaaaactgctgatgatta |
1300951 |
T |
|
| Q |
222 |
ttct------ggtaccttaattaaggtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttcgtttgatcttt---tgtgtccagat |
312 |
Q |
| |
|
| | | | ||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||| | |||| | ||| || | |
|
|
| T |
1300950 |
tgatattggtgttgtcttgattagtgtttatgagggtgagagagcaagagcgcaagacaacaatctgcttggttcgttcaagctttctatccgtcgaggt |
1300851 |
T |
|
| Q |
313 |
gctcctcgtgacacacccttggaggtatgctttgctatagatgcaaatggcaccctaactgtttctgctaaagaaatgtctacaggaaatacgaacaaga |
412 |
Q |
| |
|
|||||||||| ||| |||||||||||||| ||| ||||| ||| |||||||| |||| |||||||| || ||||| ||||||||||||||||| ||| |
|
|
| T |
1300850 |
gctcctcgtggcacccccttggaggtatgtttttctataaatgaaaatggcattttaacagtttctgccaaggaaatatctacaggaaatacgaatcaga |
1300751 |
T |
|
| Q |
413 |
tcaccataaccaatgaaaaagaaaggttgacaacatttcaagttaaaaaactgattgaagaagctgagaaatatcgcgaggaagataagaaatttttaag |
512 |
Q |
| |
|
||||||| | ||||||||||||||| ||| |||||||| || |||| ||| |||||| ||| ||||||||||| | | |||||||||||| ||||||| |
|
|
| T |
1300750 |
tcaccatcaacaatgaaaaagaaagattgtcaacatttgaaattaacaaaatgattgcagatgctgagaaataccacatggaagataagaagtttttaaa |
1300651 |
T |
|
| Q |
513 |
gaaggctaaggtaatgagtgcattggaattttgtgtttacaatatcaagaatgctttaaagaagaaggatgttaatttaaagctctcttgtgatgaaagt |
612 |
Q |
| |
|
|||||| | ||||||| || ||||| | |||||||||||| | |||||||| |||||||||||||||||||||||||| ||||| || | ||||| |
|
|
| T |
1300650 |
gaaggccacagtaatgaatgatttggattattgtgtttacaaagtgaagaatgccttaaagaagaaggatgttaatttaaatctctcccgtaaagaaagg |
1300551 |
T |
|
| Q |
613 |
gaaaagatcaacgatgcaattacggtggccaccaacttgcttgataagaataacga---acagaaagaaataaatgttcttgaggatcatctgaaggagc |
709 |
Q |
| |
|
|||||||||||| |||||||||| || | || | ||||||||||||||||||| | |||| | ||||| ||||| ||||||||||||| ||||||| |
|
|
| T |
1300550 |
gaaaagatcaacaatgcaattaccgtcacaacaagcttgcttgataagaataacaacaaacagcagaaaatagatgttgttgaggatcatctcaaggagc |
1300451 |
T |
|
| Q |
710 |
tggag |
714 |
Q |
| |
|
||||| |
|
|
| T |
1300450 |
tggag |
1300446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 17 - 714
Target Start/End: Original strand, 10494848 - 10495548
Alignment:
| Q |
17 |
cagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttaccccatt |
116 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||||||||||||| ||||| ||||||||||||||||| || ||||| ||||||||||||||||| |
|
|
| T |
10494848 |
cagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgagatgttaccccatt |
10494947 |
T |
|
| Q |
117 |
gtcacttggtatccttgttg---atgaagataccatgagtgtggtgattcctagaaatacttctgtgcctatcaagaagacagaagaatatgctacccgt |
213 |
Q |
| |
|
|||||||||||| || ||||||||| |||| ||||||||||||||| || ||||| | ||| |||||| ||| || || | ||| | |
|
|
| T |
10494948 |
gtcacttggtattgaagtaacaaatgaagatatcatggatgtggtgattcctaggaacacttccatccctgtcaagatgactaaaatattttatacagct |
10495047 |
T |
|
| Q |
214 |
gaagataattctggtaccttaattaaggtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttcgtttgatctt--ttgtgtc-cag |
310 |
Q |
| |
|
| |||||||| |||| || |||| || ||||||||||||||||||||||| | || || ||||| |||||||| |||| ||| || ||| ||| |
|
|
| T |
10495048 |
ggagataattgtggtgtctcttttaacgtatatgagggtgagagagcaagagctagtgagaataatctacttggttcatttgcgcttggttatgtttcag |
10495147 |
T |
|
| Q |
311 |
atgctcctcgtgacacacccttggaggtatgctttgctatagatgcaaatggcaccctaactgtttctgctaaagaaatgtctacaggaaatacgaacaa |
410 |
Q |
| |
|
| ||||||| | |||||||||||||||||| | || |||| |||||||| ||| |||||| ||||||| || || |||||||| |||| |||| |
|
|
| T |
10495148 |
gt---cctcgtggccagcccttggaggtatgcttttccattgatgaaaatggcatcctgactgttactgctaaggatatatctacaggcaatatgaacgc |
10495244 |
T |
|
| Q |
411 |
gatcaccataaccaatgaaaaagaaaggttgacaacatttcaagttaaaaaactgattgaagaagctgagaaatatcgcgaggaagataagaaattttta |
510 |
Q |
| |
|
||||||||| || ||||| |||||||||||| ||| || || |||||||| ||||| |||||||| ||||||| | | ||||||| |||||| ||| |
|
|
| T |
10495245 |
gatcaccattactaatgacaaagaaaggttgtcaatgttagaaattaaaaaaatgattaaagaagctaagaaataccatgtcgaagatatgaaattctta |
10495344 |
T |
|
| Q |
511 |
aggaaggctaaggtaatgagtgcattggaattttgtgtttacaatatcaagaatgctttaaagaagaaggatgttaatttaaagctctcttgtgatgaaa |
610 |
Q |
| |
|
|||||||| ||||||||||||||||| || | ||||||||||||||| ||||| |||||||||||||||| |||||| | | ||||| | | |||| |
|
|
| T |
10495345 |
aggaaggccaaggtaatgagtgcattagattcttgtgtttacaatatgaagaacactttaaagaagaaggacgttaatctcatcctctccgctcaagaaa |
10495444 |
T |
|
| Q |
611 |
gtgaaaagatcaacgatgcaattacggtggccaccaacttgcttgataagaataacgaacagaaagaaataaatgttcttgaggatcatctgaaggagct |
710 |
Q |
| |
|
||| ||||||| | |||||||||| | || | || ||||||||||||| ||| || ||||| ||||| ||||||||||| |||||||| ||||||| |
|
|
| T |
10495445 |
ttgagaagatcagcaatgcaattacttttgctatgaatttgcttgataagagtaataaagagaaaaaaatagatgttcttgagaatcatctggaggagct |
10495544 |
T |
|
| Q |
711 |
ggag |
714 |
Q |
| |
|
|||| |
|
|
| T |
10495545 |
ggag |
10495548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 17 - 714
Target Start/End: Complemental strand, 8667113 - 8666410
Alignment:
| Q |
17 |
cagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttaccccatt |
116 |
Q |
| |
|
|||| |||||||||||||||||||||||| | ||||||||||||||||| ||||| | |||||||||||| || || ||||| |||||||| ||||| || |
|
|
| T |
8667113 |
cagacgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctgtaagaatgtccccaacttggtgctacgagatgtgaccccttt |
8667014 |
T |
|
| Q |
117 |
gtcacttggtatccttgt---tgatgaagataccatgagtgtggtgattcctagaaatacttctgtgcctatcaagaagacagaagaatatgctacccgt |
213 |
Q |
| |
|
|||||||||||| ||| | |||| ||| |||||||||||||||||||||||| ||||| | ||| ||||||||||| |||| | |||| | |
|
|
| T |
8667013 |
gtcacttggtatttctgtaagtattgaacatatcatgagtgtggtgattcctagaaacacttccatacctgtcaagaagacaagtcgatattccaccctt |
8666914 |
T |
|
| Q |
214 |
gaagataattctggtacctt---aattaag--gtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttcgtttgatcttttgtgtcc |
308 |
Q |
| |
|
| ||||| | || |||| |||| |||||||||||||||||| ||||||| | ||||| |||||||||||||| |||| ||| |||| |
|
|
| T |
8666913 |
tatgataa--ccagtgccttgtcaattttcttgtttatgagggtgagagaccaagagctgctgacaataatctgcttggttcatttgggcttcgttgtct |
8666816 |
T |
|
| Q |
309 |
agatgctcctcgtgacacacccttggaggtatgctttgctatagatgcaaatggcaccctaactgtttctgctaaagaaatgtctacaggaaatacgaac |
408 |
Q |
| |
|
| ||| |||| | |||||||||||||||||| | || |||| |||||| | ||| |||||| |||||| ||||| || ||||| |||| |||| |
|
|
| T |
8666815 |
tccaggtccccgtggccagcccttggaggtatgcttttcaattgatgaaaatggtatcctgactgttactgctagggaaatatccacaggcaatatgaac |
8666716 |
T |
|
| Q |
409 |
aagatcaccataaccaatgaaaaagaaaggttgacaacatttcaagttaaaaaactgattgaagaagctgagaaatatcgcgaggaagataagaaatttt |
508 |
Q |
| |
|
| |||||||||||||||||| |||||||||||| ||| || | || ||||| ||||| |||||||||||||||| | | |||||||| | |||||| |
|
|
| T |
8666715 |
atgatcaccataaccaatgacaaagaaaggttgtcaatgttcgacattgaaaaaatgattaaagaagctgagaaataccatgtggaagatatgcaatttt |
8666616 |
T |
|
| Q |
509 |
taaggaaggctaaggtaatgagtgcattggaattttgtgtttacaatatcaagaatgctttaaagaagaaggatgttaatttaaagctctcttgtgatga |
608 |
Q |
| |
|
|||| | ||| ||||||||| ||| ||| || | ||||||||||||||| ||||| |||||||||||||||||||||||| | | ||||| | | || |
|
|
| T |
8666615 |
taagaagggccaaggtaatgtgtgaattagattcttgtgtttacaatatgaagaaggctttaaagaagaaggatgttaatctgattctctcccctcaaga |
8666516 |
T |
|
| Q |
609 |
aagtgaaaagatcaacgatgcaattacggtggccaccaacttgcttgataagaataacgaacagaaagaaataaatgttcttgaggatcatctgaaggag |
708 |
Q |
| |
|
|| || |||||||||| |||||||||| || || | | ||||||||||||||||| || ||||||||||| |||||||||||| | ||||| ||||| |
|
|
| T |
8666515 |
aattgcaaagatcaacaatgcaattactgttgctatggatttgcttgataagaataaaaaagagaaagaaatagatgttcttgagggttatctggaggag |
8666416 |
T |
|
| Q |
709 |
ctggag |
714 |
Q |
| |
|
|||||| |
|
|
| T |
8666415 |
ctggag |
8666410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 17 - 714
Target Start/End: Original strand, 13333842 - 13334542
Alignment:
| Q |
17 |
cagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttaccccatt |
116 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||||||||||||| ||||| ||||||| ||||||||| || ||||| |||||||||| |||||| |
|
|
| T |
13333842 |
cagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagactgtcccgaacttggtgctacgagatgttatcccatt |
13333941 |
T |
|
| Q |
117 |
gtcacttggtatccttgttgatgaagataccatgagtgtggtgattcctagaaatacttctgtgcctatcaagaagac---agaagaatatgctacccgt |
213 |
Q |
| |
|
||||||||||| || ||||| ||| ||||| ||| ||||||||||| || ||||| | ||| |||||||||| || || |||| ||| | |
|
|
| T |
13333942 |
atcacttggtatttcagtatatgaacatatcatgaatgttgtgattcctaggaacacttccatccctgtcaagaagactaaaggaggatattatacagct |
13334041 |
T |
|
| Q |
214 |
gaagataattctggtaccttaattaaggtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttcgtttgatctt--ttgtg-tccag |
310 |
Q |
| |
|
|||||||||| | || || ||| | || ||||||||||||||||||||||| | ||||| ||||| |||||||| ||| ||| || || |||| |
|
|
| T |
13334042 |
gaagataattgttgtgtctctattgatgtatatgagggtgagagagcaagagctagtgacaataatctacttggttcatttttgcttgattatgttcca- |
13334140 |
T |
|
| Q |
311 |
atgctcctcgtgacacacccttggaggtatgctttgctatagatgcaaatggcaccctaactgtttctgctaaagaaatgtctacaggaaatacgaacaa |
410 |
Q |
| |
|
| ||| |||| |||||||||||||||||| | || |||| |||||||| ||| || ||| ||||||| || || |||||||| |||| |||| |
|
|
| T |
13334141 |
--ggtccgcgtggtcagcccttggaggtatgcttttccattgatgaaaatggcatcctgacggttactgctaaggatatatctacaggcaatatgaacgc |
13334238 |
T |
|
| Q |
411 |
gatcaccataaccaatgaaaaagaaaggttgacaacatttcaagttaaaaaactgattgaagaagctgagaaatatcgcgaggaagataagaaattttta |
510 |
Q |
| |
|
||||||||| || ||||| ||||||||||| ||| || || || ||||| ||||| |||||||| || |||| | | |||||||||||||| ||| |
|
|
| T |
13334239 |
gatcaccattactaatgacaaagaaaggttatcaatgttagaaattgaaaaaatgattaaagaagctaaggaataccatgtcgaagataagaaattctta |
13334338 |
T |
|
| Q |
511 |
aggaaggctaaggtaatgagtgcattggaattttgtgtttacaatatcaagaatgctttaaagaagaaggatgttaatttaaagctctcttgtgatgaaa |
610 |
Q |
| |
|
|||||||| |||||||||| |||||| || | ||||||||||||||| ||||| ||||||||||||| || |||||| | | ||||| | | |||| |
|
|
| T |
13334339 |
aggaaggccaaggtaatgaatgcattagattcttgtgtttacaatatgaagaacactttaaagaagaaagacgttaatctcatcctctcccctcaagaaa |
13334438 |
T |
|
| Q |
611 |
gtgaaaagatcaacgatgcaattacggtggccaccaacttgcttgataagaataacgaacagaaagaaataaatgttcttgaggatcatctgaaggagct |
710 |
Q |
| |
|
| | ||||||| | |||||||||| | || | || ||||||||||||||||| || ||||||||||| |||||||||||| |||||| ||||||| |
|
|
| T |
13334439 |
ttaagaagatcagcaatgcaattacttttgctatgaatttgcttgataagaataataaagagaaagaaatagatgttcttgagggtcatctcgaggagct |
13334538 |
T |
|
| Q |
711 |
ggag |
714 |
Q |
| |
|
|||| |
|
|
| T |
13334539 |
ggag |
13334542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 328 - 708
Target Start/End: Complemental strand, 8653824 - 8653438
Alignment:
| Q |
328 |
cccttggaggtatgctttgctatagatgcaaatggcaccctaactgtttctgctaaagaaatgtctacaggaaatacgaacaagatcaccataaccaatg |
427 |
Q |
| |
|
|||||||||||||||||| | || |||| |||||| | | |||||||||||| ||| || || | || |||| | |||| |||||||||| || |||| |
|
|
| T |
8653824 |
cccttggaggtatgcttttccattgatgaaaatggtatcttaactgtttctggtaaggatatcaccactggaattctgaacgagatcaccatcactaatg |
8653725 |
T |
|
| Q |
428 |
aaaaagaaaggttgacaacatttcaagttaaaaaactgattgaagaagctgagaaatatcgcgaggaagataagaaatttttaaggaaggctaaggtaat |
527 |
Q |
| |
|
| |||||||||||| ||| ||| || || ||||| ||||||||||||||||||||| || | |||||||| ||||||||| |||||||| || ||||| |
|
|
| T |
8653724 |
agaaagaaaggttgtcaaagtttgaaattgaaaaaaagattgaagaagctgagaaataccgtgtggaagatatgaaatttttgaggaaggccaaagtaat |
8653625 |
T |
|
| Q |
528 |
gagtgcattggaattttgtgtttacaatatcaagaatgctttaaagaagaaggatgttaatttaaagctctcttgtgatgaaagtgaaaagatcaacgat |
627 |
Q |
| |
|
|| |||||||| | ||||||||||||||| |||| |||||| || | |||||||||| || ||| ||||| | | |||||||| |||||||| || |
|
|
| T |
8653624 |
aagcgcattggattcttgtgtttacaatataaagagtgctttgaatatgaaggatgttgatctaatcctctcccctcaagaaagtgagcagatcaacaat |
8653525 |
T |
|
| Q |
628 |
gcaattacggtggccaccaacttgcttg------ataagaataacgaacagaaagaaataaatgttcttgaggatcatctgaaggag |
708 |
Q |
| |
|
||||||| || |||| || ||||| | ||||||||||| |||| | ||||||| ||||||||||| ||||||| |||||| |
|
|
| T |
8653524 |
gcaattattgttgccatgaatttgctcgaaatgaataagaataaccaacatatagaaatagatgttcttgagcatcatcttaaggag |
8653438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 234 - 710
Target Start/End: Original strand, 8586400 - 8586879
Alignment:
| Q |
234 |
aattaaggtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttcgtttgatcttttgtg---tccagatgctcctcgtgacacaccc |
330 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | ||||||||||||||||| | ||| |||||| ||| || | ||||||||||| ||| |
|
|
| T |
8586400 |
aattaaggtttatgagggtgagagagcaagagctagtgacaacaatctgcttggcttttttaatctttcgtgcgtcccgggtgctcctcgtgggcatccc |
8586499 |
T |
|
| Q |
331 |
ttggaggtatgctttgctatagatgcaaatggcaccctaactgtttctgctaaagaaatgtctacaggaaatacgaacaagatcaccataaccaatgaaa |
430 |
Q |
| |
|
|| ||||||||||| | || |||| |||||| | ||||||||||||||| || ||||| || | || ||||| ||| | || || ||||||||||| | |
|
|
| T |
8586500 |
tttgaggtatgcttcaccatcgatgaaaatggtatcctaactgtttctgcgaaggaaatatcctctggcaatacaaacgaaataacgataaccaatgaca |
8586599 |
T |
|
| Q |
431 |
aagaaaggttgacaacatttcaagttaaaaaactgattgaagaagctgagaaatatcgcgaggaagataagaaatttttaaggaaggctaaggtaatgag |
530 |
Q |
| |
|
|||||||||| | | | || |||||| ||||||| ||||||| ||| || | || || ||| ||||||| ||||||||||||||||||||| |
|
|
| T |
8586600 |
aagaaaggttatcggctgatgaaattaaaagactgattcaagaagcagaggtgtacctcgctgaggatcagaaattcctaaggaaggctaaggtaatgaa |
8586699 |
T |
|
| Q |
531 |
tgcattggaattttgtgtttacaatatcaagaatgctttaaagaagaaggatgttaatttaaagctctcttgtgatgaaagtgaaaagatcaacgatgca |
630 |
Q |
| |
|
| |||| || |||||||||||| | | ||||||| ||||||| |||||| |||| ||||| ||||| | | || | |||||||||| ||||| |
|
|
| T |
8586700 |
ttcattagatgattgtgtttacaagttaaggaatgctctaaagaataaggatattaaactaaagtgctcttctcaaaaagttaaaaagatcaatcatgca |
8586799 |
T |
|
| Q |
631 |
attacggtggccaccaacttgcttgataagaataacgaacagaaagaaataaatgttcttgaggatcatctgaaggagct |
710 |
Q |
| |
|
||||| |||| || || |||||||||||||||||| | |||| || ||| ||||||||| |||||||||||||||||| |
|
|
| T |
8586800 |
attacaatggctacaaatttgcttgataagaataaccaggagaatgacatagatgttcttgtggatcatctgaaggagct |
8586879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 458 - 714
Target Start/End: Original strand, 8671990 - 8672246
Alignment:
| Q |
458 |
aaaaactgattgaagaagctgagaaatatcgcgaggaagataagaaatttttaaggaaggctaaggtaatgagtgcattggaattttgtgtttacaatat |
557 |
Q |
| |
|
||||| ||||| |||||||||||||||||| | |||||||| | |||||||||| | ||| ||||||||| ||||||| || | ||||||||||||||| |
|
|
| T |
8671990 |
aaaaaatgattaaagaagctgagaaatatcatgtggaagatatgcaatttttaagaagggccaaggtaatgtgtgcattagattcttgtgtttacaatat |
8672089 |
T |
|
| Q |
558 |
caagaatgctttaaagaagaaggatgttaatttaaagctctcttgtgatgaaagtgaaaagatcaacgatgcaattacggtggccaccaacttgcttgat |
657 |
Q |
| |
|
||||| |||||| ||||||| |||||||| | | ||||| | | |||| || |||||||||| |||||||||| || || | | ||||||||| |
|
|
| T |
8672090 |
gaagaacgctttagagaagaacaatgttaatctgattctctcccctcaagaaattgcaaagatcaacaatgcaattactgttgctatggatttgcttgat |
8672189 |
T |
|
| Q |
658 |
aagaataacgaacagaaagaaataaatgttcttgaggatcatctgaaggagctggag |
714 |
Q |
| |
|
| |||||| || ||||||||||| |||||||||||| | ||||| ||||||||||| |
|
|
| T |
8672190 |
atgaataaaaaagagaaagaaatagatgttcttgagggttatctggaggagctggag |
8672246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 19 - 222
Target Start/End: Complemental strand, 8545325 - 8545122
Alignment:
| Q |
19 |
gatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttaccccattgt |
118 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||| | |||| |||| |||||||||||| || | ||||| |||||||||||||| |||| |
|
|
| T |
8545325 |
gatgaggctgttgcttatggtgcagctgtccaggctgctttgctgagtgaagacaataagaatgtcccaaacatggtgctacgagatgttacccctttgt |
8545226 |
T |
|
| Q |
119 |
cacttggtatccttgttgatgaagataccatgagtgtggtgattcctagaaatacttctgtgcctatcaagaagacagaagaatatgctacccgtgaaga |
218 |
Q |
| |
|
||||||||||| || | | | | ||| |||||||||||||||||| | ||||||||||| || ||||||||||| ||| ||| ||||| ||||||| |
|
|
| T |
8545225 |
cacttggtatctttatacacggaaatattatgagtgtggtgattccttggaatacttctgtaccattcaagaagacacaagtttattctaccggtgaaga |
8545126 |
T |
|
| Q |
219 |
taat |
222 |
Q |
| |
|
|||| |
|
|
| T |
8545125 |
taat |
8545122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 235 - 710
Target Start/End: Complemental strand, 8616188 - 8615710
Alignment:
| Q |
235 |
attaaggtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttcgtttgatcttttgtg---tccagatgctcctcgtgacacaccct |
331 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||| | ||||||||||||||||| | ||| |||||| ||| ||| | ||||||| ||||| |||| |
|
|
| T |
8616188 |
attaagttttatgagggtgagagatcaagagctagtgacaacaatctgcttggatttttttatctttcgtgcactcctggtgctccttgtgaccatccct |
8616089 |
T |
|
| Q |
332 |
tggaggtatgctttgctatagatgcaaatggcaccctaactgtttctgctaaagaaatgtctacaggaaatacgaacaagatcaccataaccaatgaaaa |
431 |
Q |
| |
|
||||||||||||| | || || | ||||| | ||| ||||| ||||| || |||| ||||| || ||||| || | || || ||||||||||| || |
|
|
| T |
8616088 |
tggaggtatgcttcaccatcgacgataatggtatccttactgtatctgcgaaggaaaaatctactggcaatacaaatgaaataacgataaccaatgacaa |
8615989 |
T |
|
| Q |
432 |
agaaaggttgacaacatttcaagttaaaaaactgattgaagaagctgagaaatatcgcgaggaagataagaaatttttaaggaaggctaaggtaatgagt |
531 |
Q |
| |
|
||||||||| | | | || |||||||||||||| ||||||| ||| | || |||| |||||| | ||||| |||||||||| |||||||||| | |
|
|
| T |
8615988 |
agaaaggttatcggctgatgaaattaaaaaactgattcaagaagcagaggagtaccgcgctgaagatgaaaaattcctaaggaaggccaaggtaatgaat |
8615889 |
T |
|
| Q |
532 |
gcattggaattttgtgtttacaatatcaagaatgctttaaagaagaaggatgttaatttaaagctctcttgtgatgaaagtgaaaagatcaacgatgcaa |
631 |
Q |
| |
|
| ||| || || ||||||| | | ||||||| ||||||| ||||||||| ||||||||| || | | | || |||||| |||||| |||||| |
|
|
| T |
8615888 |
gaattagatgactgcatttacaagttgaggaatgctctaaagaataaggatgttgctttaaagctatcatctcaaaaagttgaaaatatcaacaatgcaa |
8615789 |
T |
|
| Q |
632 |
ttacggtggccaccaacttgcttgataagaataacgaacagaaagaaataaatgttcttgaggatcatctgaaggagct |
710 |
Q |
| |
|
|||| ||||| || || |||||||||| ||||||| | |||| ||| || | ||||| || ||||||||||||||||| |
|
|
| T |
8615788 |
ttactgtggctacaaatttgcttgataggaataaccagcagagtgaagtagaagttctcgaagatcatctgaaggagct |
8615710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 8654144 - 8654032
Alignment:
| Q |
17 |
cagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttaccccatt |
116 |
Q |
| |
|
||||||||||| |||| ||||| || ||| | ||||||||||||||||| |||| |||||||||||||| || || ||||| || |||||||||||||| |
|
|
| T |
8654144 |
cagatgaggctattgcatatggcgctgctgttcaggctgctattttgagtgaagactttaagaatgtccccaacttggtgctacgtgatgttaccccatt |
8654045 |
T |
|
| Q |
117 |
gtcacttggtatc |
129 |
Q |
| |
|
||||||||||||| |
|
|
| T |
8654044 |
gtcacttggtatc |
8654032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 492 - 711
Target Start/End: Complemental strand, 8653402 - 8653177
Alignment:
| Q |
492 |
ggaagataagaaatttttaaggaaggctaaggtaatgagtgcattggaattttgtgtttacaatatcaagaatgctttaaagaagaaggatgttaattta |
591 |
Q |
| |
|
|||||||| |||||||||||||||||| | |||||||||||||||||| | ||| ||| | ||||| | ||||||||| || | ||||||||||||| || |
|
|
| T |
8653402 |
ggaagatatgaaatttttaaggaaggccacggtaatgagtgcattggattcttgcgttaagaatataacgaatgctttgaatacgaaggatgttaatcta |
8653303 |
T |
|
| Q |
592 |
aagctctcttgtgatgaaagtgaaaagatcaacgatgcaattacggtggccaccaacttgcttg------ataagaataacgaacagaaagaaataaatg |
685 |
Q |
| |
|
| |||| | | |||||||||||||||||| |||||||| | ||||| || ||||||| ||||||||||| |||||| | | ||| ||| |
|
|
| T |
8653302 |
atcatctcccctcaagaaagtgaaaagatcaacaatgcaatttttggggccatgaatttgcttgataagaataagaataaccaacagataaatatagatg |
8653203 |
T |
|
| Q |
686 |
ttcttgaggatcatctgaaggagctg |
711 |
Q |
| |
|
|||||||| ||||||| ||||||||| |
|
|
| T |
8653202 |
ttcttgagcatcatctcaaggagctg |
8653177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 241 - 599
Target Start/End: Complemental strand, 3146731 - 3146373
Alignment:
| Q |
241 |
gtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttcgtttgatcttttgtgtccaga-tgctcctcgtgacacacccttg-gaggt |
338 |
Q |
| |
|
|||||||||||||||||||||||||| | |||||||||||||||||||| ||| ||||| ||||| | ||||||||| | ||||||| ||||| |
|
|
| T |
3146731 |
gtttatgagggtgagagagcaagagctagtgacaacaatctgcttggttctttttgtctttc-tgtcccaagtgctcctcgcggt-cacccttttgaggt |
3146634 |
T |
|
| Q |
339 |
atgctttgctatagatgcaaatggcaccctaactgtttctgctaaagaaatgtctacaggaaatacgaacaagatcaccataaccaatgaaaaagaaagg |
438 |
Q |
| |
|
||||||| |||| ||| |||||||| | ||| |||||||||||| |||| || || || | |||||| |||| || |||| ||||| |||||||| |
|
|
| T |
3146633 |
atgctttactatcaatgaaaatggcatcttaattgtttctgctaatgaaaaatccactggtagtacgaatgagattacagtaactaatgacaaagaaaga |
3146534 |
T |
|
| Q |
439 |
ttgacaacatttcaagttaaaaaactgattgaagaagctgagaaatatcgcgaggaagataagaaatttttaaggaaggctaaggtaatgagtgcattgg |
538 |
Q |
| |
|
||| || | || ||| |||| |||| |||||||||| || || || | || ||| | |||||| |||||||||| || ||||||| |||||| | |
|
|
| T |
3146533 |
ttgtcatcccaagaaattataaaaatgatcaaagaagctgaaaattaccgtgttgaggatgaaaaatttctaaggaaggccaatgtaatgaatgcattag |
3146434 |
T |
|
| Q |
539 |
aattttgtgtttacaatatcaagaatgctttaaagaagaaggatgttaatttaaagctctc |
599 |
Q |
| |
|
| | |||||||||||| || || ||||||||||||||||||||||| ||| |||| ||||| |
|
|
| T |
3146433 |
attattgtgtttacaagatgaaaaatgctttaaagaagaaggatgtgaatataaatctctc |
3146373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 6789204 - 6789096
Alignment:
| Q |
19 |
gatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttaccccattgt |
118 |
Q |
| |
|
||||||||||||||||| ||||||||| ||||||||||| | ||||||||||| | ||||| ||| || || || ||||||| ||||||||| || |||| |
|
|
| T |
6789204 |
gatgaggctgttgcttacggtgcagctgtccaggctgctttgttgagcgaaggctctaagagtgttccaaacttggtgctgcaagatgttacaccgttgt |
6789105 |
T |
|
| Q |
119 |
cacttggta |
127 |
Q |
| |
|
| ||||||| |
|
|
| T |
6789104 |
ctcttggta |
6789096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 53 - 128
Target Start/End: Original strand, 8671608 - 8671683
Alignment:
| Q |
53 |
ctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttaccccattgtcacttggtat |
128 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||| || || ||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
8671608 |
ctgctattttgagcaaaggctttaagaatgtccccaacttggtgctacgagatgttacgccattgtcacttggtat |
8671683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 241 - 322
Target Start/End: Complemental strand, 8646344 - 8646263
Alignment:
| Q |
241 |
gtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttcgtttgatcttttgtgtccagatgctcctcgtg |
322 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||| | |||| ||||||||||| |
|
|
| T |
8646344 |
gtttatgagggtgagagagcaagagcaagtgacaacaatctgcttggttcttttaatctttggctcccagctgctcctcgtg |
8646263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 188
Target Start/End: Complemental strand, 8616316 - 8616201
Alignment:
| Q |
73 |
tttaagaatgtcccgaattttgtgctgcgagatgttaccccattgtcacttggtatccttgttgatgaagataccatgagtgtggtgattcctagaaata |
172 |
Q |
| |
|
||||||||||| || || || | |||||||||||||||||| |||||||||||||| | || | | ||||| |||||||||||||||||||| |||| |
|
|
| T |
8616316 |
tttaagaatgttccaaacttggcgctgcgagatgttacccctctgtcacttggtatcttagtcaaaggagatattatgagtgtggtgattcctaggaata |
8616217 |
T |
|
| Q |
173 |
cttctgtgcctatcaa |
188 |
Q |
| |
|
||||||| ||| |||| |
|
|
| T |
8616216 |
cttctgtacctgtcaa |
8616201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 8537728 - 8537638
Alignment:
| Q |
19 |
gatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgtta |
109 |
Q |
| |
|
||||| ||||||||||||||||| ||| ||||||||||| | ||||||| ||| |||||| ||| ||||| || |||||||||||||||| |
|
|
| T |
8537728 |
gatgaagctgttgcttatggtgctgctgtccaggctgctttgttgagcggaggcattaagactgttccgaacttggtgctgcgagatgtta |
8537638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 8581392 - 8581285
Alignment:
| Q |
19 |
gatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttaccccattgt |
118 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||||||| | | || ||||| |||||| ||| || || || | ||||||||||||| ||||||| |
|
|
| T |
8581392 |
gatgaggctgttgcttatggtgctgctattcaggctgctttggttagtgaaggcattaagagtgttccaaacttgattttgcgagatgttacaccattgt |
8581293 |
T |
|
| Q |
119 |
cacttggt |
126 |
Q |
| |
|
|||||||| |
|
|
| T |
8581292 |
cacttggt |
8581285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 29578151 - 29578257
Alignment:
| Q |
22 |
gaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttaccccattgtcac |
121 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||| | |||| || || |||||||||| || ||||| || |||||||| |||| || ||||| | |
|
|
| T |
29578151 |
gaggctgttgcttatggtgcagctgtgcaggctgctttgttgattgatggcattaagaatgttccaaatttggtcttgcgagatattacacccttgtcgc |
29578250 |
T |
|
| Q |
122 |
ttggtat |
128 |
Q |
| |
|
||||||| |
|
|
| T |
29578251 |
ttggtat |
29578257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 3146956 - 3146846
Alignment:
| Q |
19 |
gatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttaccccattgt |
118 |
Q |
| |
|
|||||||| |||||||||||||||||| | || |||||| | ||||| |||| ||||| ||||| || || || ||| ||| ||||||| | || |||| |
|
|
| T |
3146956 |
gatgaggccgttgcttatggtgcagctgtgcaagctgctttgttgagtgaagactttaaaaatgttccaaacttggtggtgcaagatgttgctcctttgt |
3146857 |
T |
|
| Q |
119 |
cacttggtatc |
129 |
Q |
| |
|
| ||||||||| |
|
|
| T |
3146856 |
ctcttggtatc |
3146846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 29582317 - 29582355
Alignment:
| Q |
19 |
gatgaggctgttgcttatggtgcagctatccaggctgct |
57 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||||| |
|
|
| T |
29582317 |
gatgaggctgttgcttatggtgcagctgtgcaggctgct |
29582355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 164; Significance: 3e-87; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 234 - 714
Target Start/End: Original strand, 16658214 - 16658694
Alignment:
| Q |
234 |
aattaaggtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttcgtttgatcttttgtg---tccagatgctcctcgtgacacaccc |
330 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| | ||||| |||||||| |||| || |||| || ||||| ||||||||| | | |||| |
|
|
| T |
16658214 |
aattaatgtttatgagggtgagagagcaagagctgctgacaataatctgctcggttttttcagcctttcttgcgttccaggtgctcctcggggccaaccc |
16658313 |
T |
|
| Q |
331 |
ttggaggtatgctttgctatagatgcaaatggcaccctaactgtttctgctaaagaaatgtctacaggaaatacgaacaagatcaccataaccaatgaaa |
430 |
Q |
| |
|
|| || ||||| |||| | |||| |||||| | |||||||||||||||||| ||| | |||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
16658314 |
ttagatgtatgttttgacctcgatgaaaatggtatcctaactgtttctgctaaggaagtatctacaggaaatacaaacaagatcaccataaccaatgaaa |
16658413 |
T |
|
| Q |
431 |
aagaaaggttgacaacatttcaagttaaaaaactgattgaagaagctgagaaatatcgcgaggaagataagaaatttttaaggaaggctaaggtaatgag |
530 |
Q |
| |
|
||||||| ||| |||| || || |||||||| |||||||||||||||||| ||| | || ||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
16658414 |
aagaaagattgtcaaccttggaaattaaaaaaatgattgaagaagctgagagataccacgtggaagataagaaatttttacaaaaggccaaggtaatgaa |
16658513 |
T |
|
| Q |
531 |
tgcattggaattttgtgtttacaatatcaagaatgctttaaagaagaaggatgttaatttaaagctctcttgtgatgaaagtgaaaagatcaacgatgca |
630 |
Q |
| |
|
||||||||| | ||||||||||||||| |||||||||||| ||||| ||||| |||||||||||||| | | | |||| ||| ||||||||| ||||| |
|
|
| T |
16658514 |
tgcattggattattgtgtttacaatatgaagaatgcttta---aagaaagatgtgaatttaaagctctcctctcaagaaattgagaagatcaacaatgca |
16658610 |
T |
|
| Q |
631 |
attacggtggccaccaacttgcttgataagaataacgaacagaaagaaataaatgttcttgaggatcatctgaaggagctggag |
714 |
Q |
| |
|
||||| |||||||| | |||||||||||||||||| |||| || |||| | ||||||||||| ||||||||||||| ||||| |
|
|
| T |
16658611 |
attactgtggccacaagtttgcttgataagaataacaaacaaaatgaaacagatgttcttgagtttcatctgaaggagatggag |
16658694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 19 - 195
Target Start/End: Complemental strand, 43625104 - 43624928
Alignment:
| Q |
19 |
gatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttaccccattgt |
118 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||| || || || |||||||||||||||||||| |||| |
|
|
| T |
43625104 |
gatgaggctgttgcttatggtgcagctgtccaggctgctattttgagtaaaggcattaagaatgttccaaaattggtgctgcgagatgttacccctttgt |
43625005 |
T |
|
| Q |
119 |
cacttggtatccttgttgatgaagataccatgagtgtggtgattcctagaaatacttctgtgcctatcaagaagaca |
195 |
Q |
| |
|
||||||||||| | | | || | ||||||||||||||||||||| ||||||||||| ||| ||||||||||| |
|
|
| T |
43625004 |
cacttggtatcttaaacaagggaggtgtcatgagtgtggtgattcctaggaatacttctgtacctgtcaagaagaca |
43624928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 16657993 - 16658103
Alignment:
| Q |
19 |
gatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttaccccattgt |
118 |
Q |
| |
|
||||| ||||||||||| ||||||||| | || |||||||||||||| ||||| |||||||||||||| |||| ||| || |||||||||||||||||| |
|
|
| T |
16657993 |
gatgaagctgttgcttacggtgcagctgttcaagctgctattttgagtgaaggctttaagaatgtcccagatttggtgttgagagatgttaccccattgt |
16658092 |
T |
|
| Q |
119 |
cacttggtatc |
129 |
Q |
| |
|
| ||||||||| |
|
|
| T |
16658093 |
cgcttggtatc |
16658103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 16662468 - 16662578
Alignment:
| Q |
19 |
gatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttaccccattgt |
118 |
Q |
| |
|
|||||||||||||||||||| |||||| | || |||||| | ||||| ||||| ||||| |||| || || || ||||||||||| ||||||||||||| |
|
|
| T |
16662468 |
gatgaggctgttgcttatggggcagctgtgcaagctgctgtgttgagtgaaggcattaaggatgttccaaacttggtgctgcgagacgttaccccattgt |
16662567 |
T |
|
| Q |
119 |
cacttggtatc |
129 |
Q |
| |
|
||||||||||| |
|
|
| T |
16662568 |
cacttggtatc |
16662578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 11999100 - 11998992
Alignment:
| Q |
19 |
gatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttaccccattgt |
118 |
Q |
| |
|
||||||||||| |||||||| |||||| | || |||||| | ||||| |||| | |||||||||| || ||||| ||| ||| |||||||| || |||| |
|
|
| T |
11999100 |
gatgaggctgtagcttatggggcagctgttcaagctgctttgttgagtgaagatgttaagaatgttccaaatttggtgttgcaggatgttactcctttgt |
11999001 |
T |
|
| Q |
119 |
cacttggta |
127 |
Q |
| |
|
| ||||||| |
|
|
| T |
11999000 |
ctcttggta |
11998992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 233 - 301
Target Start/End: Complemental strand, 43624887 - 43624819
Alignment:
| Q |
233 |
taattaaggtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttcgtttgatcttt |
301 |
Q |
| |
|
||||| ||||||||||| ||||||||||| ||| || |||||||||||| ||||||| ||| |||||| |
|
|
| T |
43624887 |
taattgaggtttatgagtgtgagagagcatgagtaagtgacaacaatctgattggttcttttaatcttt |
43624819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 235 - 289
Target Start/End: Complemental strand, 7541699 - 7541645
Alignment:
| Q |
235 |
attaaggtttatgagggtgagagagcaagagcaacagacaacaatctgcttggtt |
289 |
Q |
| |
|
||||| |||||||||||||||||||||||||| | || |||||| ||||||||| |
|
|
| T |
7541699 |
attaatgtttatgagggtgagagagcaagagccagtgataacaatttgcttggtt |
7541645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 103; Significance: 7e-51; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 241 - 707
Target Start/End: Original strand, 9336595 - 9337061
Alignment:
| Q |
241 |
gtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttcgtttgatcttttgtgtccagatgctcctcgtgacacacccttggaggtat |
340 |
Q |
| |
|
|||||||||||||||||| ||||||| || ||||| |||||||||||||| ||| ||| |||| ||||| |||| | |||||||||| | |
|
|
| T |
9336595 |
gtttatgagggtgagagaccaagagctactgacaataatctgcttggttcatttcggcttcattgtcttccagctccccgtggccatcccttggaggcct |
9336694 |
T |
|
| Q |
341 |
gctttgctatagatgcaaatggcaccctaactgtttctgctaaagaaatgtctacaggaaatacgaacaagatcaccataaccaatgaaaaagaaaggtt |
440 |
Q |
| |
|
||||| | || |||| |||||||| |||||||||| |||||| ||||| |||||||| |||| |||| |||||||| || ||||| ||||||||||| |
|
|
| T |
9336695 |
gcttttcgattgatgaaaatggcatcctaactgttactgctagggaaatatctacaggcaatatgaacgcaatcaccattactaatgacaaagaaaggtt |
9336794 |
T |
|
| Q |
441 |
gacaacatttcaagttaaaaaactgattgaagaagctgagaaatatcgcgaggaagataagaaatttttaaggaaggctaaggtaatgagtgcattggaa |
540 |
Q |
| |
|
| ||| || | || ||||| ||||| ||||||||| |||||||| | |||||||| | |||||||||| | ||| ||||||||| ||||||| || |
|
|
| T |
9336795 |
gtcaatgttcgacattgaaaaaatgattaaagaagctgcgaaatatcatgtggaagatatgcaatttttaagaagggccaaggtaatgtgtgcattagat |
9336894 |
T |
|
| Q |
541 |
ttttgtgtttacaatatcaagaatgctttaaagaagaaggatgttaatttaaagctctcttgtgatgaaagtgaaaagatcaacgatgcaattacggtgg |
640 |
Q |
| |
|
| ||||||||||||||| ||||| |||||||||||||| |||||||| | | ||| | | | |||| ||| ||||||||| |||||||||| || | |
|
|
| T |
9336895 |
tcttgtgtttacaatatgaagaacgctttaaagaagaacaatgttaatctgattctcacgcctcaagaaattgagaagatcaacaatgcaattactgttg |
9336994 |
T |
|
| Q |
641 |
ccaccaacttgcttgataagaataacgaacagaaagaaataaatgttcttgaggatcatctgaagga |
707 |
Q |
| |
|
| | || |||||||||||||||||| || ||||||||||| |||||||||||| ||||||| |||| |
|
|
| T |
9336995 |
ctatgaatttgcttgataagaataacaaagagaaagaaatagatgttcttgagggtcatctggagga |
9337061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 9336365 - 9336546
Alignment:
| Q |
17 |
cagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttaccccatt |
116 |
Q |
| |
|
||||||||||||||||||||||||||||| | || |||||||||||||| ||||| |||||||||| || || || ||||| ||||||||||||||||| |
|
|
| T |
9336365 |
cagatgaggctgttgcttatggtgcagctgttcaagctgctattttgagtgaaggctttaagaatgcgcccaacttggtgctacgagatgttaccccatt |
9336464 |
T |
|
| Q |
117 |
gtcacttggtatc----cttgttgatgaagataccatgagtgtggtgattcctagaaatacttctgtgcctatcaagaagaca |
195 |
Q |
| |
|
||||||||||||| | | | | ||| ||| |||||||||||||||||||||||| ||||| | ||| ||||||||||| |
|
|
| T |
9336465 |
gtcacttggtatcgcaacat-ataaggaaaatatcatgagtgtggtgattcctagaaacacttccatacctgtcaagaagaca |
9336546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 19 - 177
Target Start/End: Complemental strand, 30774944 - 30774786
Alignment:
| Q |
19 |
gatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttaccccattgt |
118 |
Q |
| |
|
|||||||| |||||| | || |||||| ||||||||||| | ||||| ||||| ||||||||| ||| || || |||||||||||||| ||||| |||| |
|
|
| T |
30774944 |
gatgaggcagttgctcacggggcagctgtccaggctgctctattgagtgaaggcattaagaatgccccaaagttggtgctgcgagatgtcacccctttgt |
30774845 |
T |
|
| Q |
119 |
cacttggtatccttgttgatgaagataccatgagtgtggtgattcctagaaatacttct |
177 |
Q |
| |
|
|||||||||| || || |||| |||||| |||||| |||||||| ||||||||| |
|
|
| T |
30774844 |
cacttggtatttcagtgaatcaagacaccatggatgtggtaattcctaggaatacttct |
30774786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 290
Target Start/End: Complemental strand, 30774725 - 30774670
Alignment:
| Q |
235 |
attaaggtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttc |
290 |
Q |
| |
|
||||| ||||||||||||||||||||||||| | |||||||||||||| ||||| |
|
|
| T |
30774725 |
attaatgtttatgagggtgagagagcaagagtcgcggacaacaatctgctaggttc |
30774670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 28219610 - 28219499
Alignment:
| Q |
19 |
gatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttaccccattgt |
118 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||||| | ||||| ||||| ||||| || || ||||| || ||||||| ||||||||| || |||| |
|
|
| T |
28219610 |
gatgaggctgttgcttatggtgcagctgtgcaggctgctttgttgagtgaaggctttaaaaaagttccgaagttggtgctgcaagatgttacacctttgt |
28219511 |
T |
|
| Q |
119 |
cacttggtatcc |
130 |
Q |
| |
|
| |||||||||| |
|
|
| T |
28219510 |
ctcttggtatcc |
28219499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 28219385 - 28219326
Alignment:
| Q |
241 |
gtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttcgtttgatctt |
300 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
28219385 |
gtttatgagggtgagagagcaaaagcaagtgacaacaatctgcttggttcttttgatctt |
28219326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 235 - 301
Target Start/End: Complemental strand, 43744289 - 43744223
Alignment:
| Q |
235 |
attaaggtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttcgtttgatcttt |
301 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||| |
|
|
| T |
43744289 |
attaaagtttatgagggtgagagagcaagagcaagtgacaacaatctgcttggttcttttgctcttt |
43744223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 47; Significance: 2e-17; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 357 - 479
Target Start/End: Original strand, 53416876 - 53416997
Alignment:
| Q |
357 |
aaatggcaccctaactgtttctgctaaagaaatgtctacaggaaatacgaacaagatcaccataaccaatgaaaaagaaaggttgacaacatttcaagtt |
456 |
Q |
| |
|
|||||| | |||||||||||||||||| ||||| |||| | |||||| |||| |||| |||||||||| ||| |||||||||||| ||||| || | || |
|
|
| T |
53416876 |
aaatggtatcctaactgtttctgctaaggaaatatctagaagaaataagaactagat-accataaccagtgacaaagaaaggttgtcaacaattgatatt |
53416974 |
T |
|
| Q |
457 |
aaaaaactgattgaagaagctga |
479 |
Q |
| |
|
||||| |||||||||||||||| |
|
|
| T |
53416975 |
gaaaaaatgattgaagaagctga |
53416997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 349 - 481
Target Start/End: Complemental strand, 53417564 - 53417432
Alignment:
| Q |
349 |
atagatgcaaatggcaccctaactgtttctgctaaagaaatgtctacaggaaatacgaacaagatcaccataaccaatgaaaaagaaaggttgacaacat |
448 |
Q |
| |
|
||||||| |||||| | |||||| ||||||||||| ||||| ||| | |||||| |||| ||||||||||||||| | | || ||||||| | ||| | |
|
|
| T |
53417564 |
atagatgaaaatggtatcctaaccgtttctgctaaggaaataactagaagaaataagaacgagatcaccataaccattaacaaggaaaggtggtcaataa |
53417465 |
T |
|
| Q |
449 |
ttcaagttaaaaaactgattgaagaagctgaga |
481 |
Q |
| |
|
|| || || ||||| | |||||||||||||||| |
|
|
| T |
53417464 |
ttgaaattgaaaaaataattgaagaagctgaga |
53417432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 290
Target Start/End: Original strand, 53416761 - 53416809
Alignment:
| Q |
242 |
tttatgagggtgagagagcaagagcaacagacaacaatctgcttggttc |
290 |
Q |
| |
|
||||||||||||||||| ||||||| || ||||| |||||||||||||| |
|
|
| T |
53416761 |
tttatgagggtgagagaccaagagctactgacaataatctgcttggttc |
53416809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 493 - 599
Target Start/End: Complemental strand, 28910589 - 28910483
Alignment:
| Q |
493 |
gaagataagaaatttttaaggaaggctaaggtaatgagtgcattggaattttgtgtttacaatatcaagaatgctttaaagaagaaggatgttaatttaa |
592 |
Q |
| |
|
|||||| | |||||| |||| ||||| || ||||||| |||||| | | |||||||||||| || ||||||| |||||| ||||||||| |||| ||| |
|
|
| T |
28910589 |
gaagatgaaaaatttctaagaaaggccaatgtaatgaatgcattacattattgtgtttacaagatgaagaatgatttaaacaagaaggatactaatctaa |
28910490 |
T |
|
| Q |
593 |
agctctc |
599 |
Q |
| |
|
||||||| |
|
|
| T |
28910489 |
agctctc |
28910483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 636
Target Start/End: Original strand, 12488667 - 12488755
Alignment:
| Q |
548 |
tttacaatatcaagaatgctttaaagaagaaggatgttaatttaaagctctcttgtgatgaaagtgaaaagatcaacgatgcaattacg |
636 |
Q |
| |
|
||||||| || ||||||||| |||||| |||||||||||| ||||||||||| | | | |||| ||| |||||||| |||| |||||| |
|
|
| T |
12488667 |
tttacaagatgaagaatgctctaaagaggaaggatgttaaattaaagctctcatctaaagaaaatgataagatcaatcatgcgattacg |
12488755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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